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NEWS
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NEWS
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CHANGES IN VERSION 0.9.3
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o MkReport works even if there are underscores on phenodata or sample names (they are subsituted by dots on the report).
o Readme.md improved in the github version.
CHANGES IN VERSION 0.9.2
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o plotNetwork function renders correctly data from addLong function (regression option).
o mkReport function allows to specify destination folder.
CHANGES IN VERSION 0.9.1
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o translate function improved.
o writeCsv, writeExcel and writeSif now include filtering by correlation value.
CHANGES IN VERSION 0.9.0
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o Vignettes work with local bibliography (can be installed from GitHub).
o Fixed bug in addCorrelation (two.sided alternative working properly).
o topTable allows to limit the number of items when names=TRUE.
CHANGES IN VERSION 0.8.9
------------------------
o Reactome analysis in GOanalysis function fixed (updates all the reactomes, not only the significant (adj.pval<0.05) ones).
o evaluate function bug fixes in hypergeometric option (still in test).
CHANGES IN VERSION 0.8.8
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o Small changes in the help pages of the functions.
CHANGES IN VERSION 0.8.7
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o Now available on GitHub.
o Function evaluate and addGlmnet implemented (both still in test).
CHANGES IN VERSION 0.8.5
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o Solved fugs for function mkReport (now it works if there are less than 10 selected miRNAs or mRNAs).
CHANGES IN VERSION 0.8.3
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o Function selOutliers added.
CHANGES IN VERSION 0.8.2
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o Functions addGlmnet, plotCordist improved.
o Functions plotHclust, plotSurv added.
CHANGES IN VERSION 0.8.1
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o Minor changes. Bug fixes.
CHANGES IN VERSION 0.8.0
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o Reduced the size of miRNA and mRNA matrix examples and data.obj example.