diff --git a/dynast/preprocessing/bam.py b/dynast/preprocessing/bam.py index f579ed5..ec0c832 100755 --- a/dynast/preprocessing/bam.py +++ b/dynast/preprocessing/bam.py @@ -555,7 +555,6 @@ def parse_all_reads( utils.mkstemp(temp_dir, delete=True), n=n_splits, n_threads=n_threads, - show_progress=False, ) for path, _ in splits.values(): pysam.index(path, f'{path}.bai', '-@', str(n_threads))