Is there a way to adjust the color scale bar?

[Mnew1288]

Hi Xiaojie,

Thanks so much for developing this great package!

As I analyze the differences in vector field topology between treated and untreated samples, is there a way to customize the color scale bar range for consistency when I run dyn.pl.topography and the subsequent dyn.pl.umap?

Thanks

[Sichao25]

Hi, thanks for raising the question. I feel like the key is the inset_dict parameter. You could try something like this:"

dyn.pl.topography(adata, basis='umap', color=['ntr'], s_kwargs_dict={"inset_dict": {"width": "5%", "height": "50%"}})
dyn.pl.umap(adata, color=["ntr"], inset_dict={"width": "5%", "height": "50%"})

[Mnew1288]

Hi Sichao,

Thanks for the reply! Appreciate it!

Yes, the key seems to be the 'inset_dict". However, "width" and "height" are not going to help me as I am interested in the scale of color bar, not the size of it.

I checked here:https://matplotlib.org/stable/api/_as_gen/mpl_toolkits.axes_grid1.inset_locator.inset_axes.html

It looks like "ylim" under "axes_kwargs" parameter is the key. But how to use it in dynamo?

Thanks!