From 6605b7a093d7b57f99f32481a2473dbac048c96a Mon Sep 17 00:00:00 2001 From: elfofmaxwell Date: Sun, 4 Sep 2022 02:23:18 +0900 Subject: [PATCH] Update docstring for `Preprocessor.standardize_adata` --- dynamo/preprocessing/Preprocessor.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/dynamo/preprocessing/Preprocessor.py b/dynamo/preprocessing/Preprocessor.py index 534ba1579..1cf017e70 100644 --- a/dynamo/preprocessing/Preprocessor.py +++ b/dynamo/preprocessing/Preprocessor.py @@ -214,7 +214,7 @@ def standardize_adata(self, adata: AnnData, tkey: str, experiment_type: str) -> The index of the observations would be ensured to be unique. The layers with sparse matrix would be converted to compressed csr_matrix. - The layers would be collapsed to splicing, labeling, and splicing-labeling layers. + DKM.allowed_layer_raw_names() will be used to define only_splicing, only_labeling and splicing_labeling keys. The genes would be renamed to their official name. Args: