diff --git a/docs/layouts/shortcodes/generated/core_configuration.html b/docs/layouts/shortcodes/generated/core_configuration.html
index aeab93eda81f..fd788301eea9 100644
--- a/docs/layouts/shortcodes/generated/core_configuration.html
+++ b/docs/layouts/shortcodes/generated/core_configuration.html
@@ -551,6 +551,12 @@
             <td>String</td>
             <td>The default partition name in case the dynamic partition column value is null/empty string.</td>
         </tr>
+        <tr>
+            <td><h5>partition.end-input-to-done</h5></td>
+            <td style="word-wrap: break-word;">false</td>
+            <td>Boolean</td>
+            <td>Whether mark the done status to indicate that the data is ready when end input.</td>
+        </tr>
         <tr>
             <td><h5>partition.expiration-check-interval</h5></td>
             <td style="word-wrap: break-word;">1 h</td>
diff --git a/docs/layouts/shortcodes/generated/flink_connector_configuration.html b/docs/layouts/shortcodes/generated/flink_connector_configuration.html
index cf4c7c1da692..ea5dd5dfb163 100644
--- a/docs/layouts/shortcodes/generated/flink_connector_configuration.html
+++ b/docs/layouts/shortcodes/generated/flink_connector_configuration.html
@@ -80,12 +80,6 @@
             <td>Integer</td>
             <td>If the pending snapshot count exceeds the threshold, lookup operator will refresh the table in sync.</td>
         </tr>
-        <tr>
-            <td><h5>partition.end-input-to-done</h5></td>
-            <td style="word-wrap: break-word;">false</td>
-            <td>Boolean</td>
-            <td>Whether mark the done status to indicate that the data is ready when end input.</td>
-        </tr>
         <tr>
             <td><h5>partition.idle-time-to-done</h5></td>
             <td style="word-wrap: break-word;">(none)</td>
diff --git a/paimon-common/src/main/java/org/apache/paimon/CoreOptions.java b/paimon-common/src/main/java/org/apache/paimon/CoreOptions.java
index 1256c7ba0d87..d965fd142deb 100644
--- a/paimon-common/src/main/java/org/apache/paimon/CoreOptions.java
+++ b/paimon-common/src/main/java/org/apache/paimon/CoreOptions.java
@@ -28,6 +28,7 @@
 import org.apache.paimon.fs.Path;
 import org.apache.paimon.lookup.LookupStrategy;
 import org.apache.paimon.options.ConfigOption;
+import org.apache.paimon.options.ConfigOptions;
 import org.apache.paimon.options.ExpireConfig;
 import org.apache.paimon.options.MemorySize;
 import org.apache.paimon.options.Options;
@@ -818,6 +819,13 @@ public class CoreOptions implements Serializable {
                                                             + "$hour:00:00'."))
                                     .build());
 
+    public static final ConfigOption<Boolean> PARTITION_MARK_DONE_WHEN_END_INPUT =
+            ConfigOptions.key("partition.end-input-to-done")
+                    .booleanType()
+                    .defaultValue(false)
+                    .withDescription(
+                            "Whether mark the done status to indicate that the data is ready when end input.");
+
     public static final ConfigOption<Boolean> SCAN_PLAN_SORT_PARTITION =
             key("scan.plan-sort-partition")
                     .booleanType()
diff --git a/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/FlinkConnectorOptions.java b/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/FlinkConnectorOptions.java
index d181d7b5a0c6..2c12b70a2493 100644
--- a/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/FlinkConnectorOptions.java
+++ b/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/FlinkConnectorOptions.java
@@ -355,13 +355,6 @@ public class FlinkConnectorOptions {
                             "You can specify time interval for partition, for example, "
                                     + "daily partition is '1 d', hourly partition is '1 h'.");
 
-    public static final ConfigOption<Boolean> PARTITION_MARK_DONE_WHEN_END_INPUT =
-            ConfigOptions.key("partition.end-input-to-done")
-                    .booleanType()
-                    .defaultValue(false)
-                    .withDescription(
-                            "Whether mark the done status to indicate that the data is ready when end input.");
-
     public static final ConfigOption<String> CLUSTERING_COLUMNS =
             key("sink.clustering.by-columns")
                     .stringType()
diff --git a/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/sink/partition/PartitionMarkDone.java b/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/sink/partition/PartitionMarkDone.java
index 39438a101b04..2c5d55f203dc 100644
--- a/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/sink/partition/PartitionMarkDone.java
+++ b/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/sink/partition/PartitionMarkDone.java
@@ -42,8 +42,8 @@
 import java.util.List;
 import java.util.Set;
 
+import static org.apache.paimon.CoreOptions.PARTITION_MARK_DONE_WHEN_END_INPUT;
 import static org.apache.paimon.flink.FlinkConnectorOptions.PARTITION_IDLE_TIME_TO_DONE;
-import static org.apache.paimon.flink.FlinkConnectorOptions.PARTITION_MARK_DONE_WHEN_END_INPUT;
 
 /** Mark partition done. */
 public class PartitionMarkDone implements Closeable {
diff --git a/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/sink/partition/PartitionMarkDoneTrigger.java b/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/sink/partition/PartitionMarkDoneTrigger.java
index 5b1b53d6326a..0094c5511809 100644
--- a/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/sink/partition/PartitionMarkDoneTrigger.java
+++ b/paimon-flink/paimon-flink-common/src/main/java/org/apache/paimon/flink/sink/partition/PartitionMarkDoneTrigger.java
@@ -44,8 +44,8 @@
 import java.util.List;
 import java.util.Map;
 
+import static org.apache.paimon.CoreOptions.PARTITION_MARK_DONE_WHEN_END_INPUT;
 import static org.apache.paimon.flink.FlinkConnectorOptions.PARTITION_IDLE_TIME_TO_DONE;
-import static org.apache.paimon.flink.FlinkConnectorOptions.PARTITION_MARK_DONE_WHEN_END_INPUT;
 import static org.apache.paimon.flink.FlinkConnectorOptions.PARTITION_TIME_INTERVAL;
 import static org.apache.paimon.utils.PartitionPathUtils.extractPartitionSpecFromPath;
 
diff --git a/paimon-flink/paimon-flink-common/src/test/java/org/apache/paimon/flink/FlinkBatchJobPartitionMarkdoneITCase.java b/paimon-flink/paimon-flink-common/src/test/java/org/apache/paimon/flink/FlinkBatchJobPartitionMarkdoneITCase.java
index 9c97151ecbe7..340213aeae1b 100644
--- a/paimon-flink/paimon-flink-common/src/test/java/org/apache/paimon/flink/FlinkBatchJobPartitionMarkdoneITCase.java
+++ b/paimon-flink/paimon-flink-common/src/test/java/org/apache/paimon/flink/FlinkBatchJobPartitionMarkdoneITCase.java
@@ -161,7 +161,7 @@ private FileStoreTable buildFileStoreTable(int[] partitions, int[] primaryKey)
         options.set(BUCKET, 3);
         options.set(PATH, getTempDirPath());
         options.set(FILE_FORMAT, CoreOptions.FILE_FORMAT_AVRO);
-        options.set(FlinkConnectorOptions.PARTITION_MARK_DONE_WHEN_END_INPUT.key(), "true");
+        options.set(CoreOptions.PARTITION_MARK_DONE_WHEN_END_INPUT.key(), "true");
 
         Path tablePath = new CoreOptions(options.toMap()).path();
         if (primaryKey.length == 0) {
diff --git a/paimon-flink/paimon-flink-common/src/test/java/org/apache/paimon/flink/sink/partition/PartitionMarkDoneTest.java b/paimon-flink/paimon-flink-common/src/test/java/org/apache/paimon/flink/sink/partition/PartitionMarkDoneTest.java
index 6dc14c9d0342..ecef6d337a6b 100644
--- a/paimon-flink/paimon-flink-common/src/test/java/org/apache/paimon/flink/sink/partition/PartitionMarkDoneTest.java
+++ b/paimon-flink/paimon-flink-common/src/test/java/org/apache/paimon/flink/sink/partition/PartitionMarkDoneTest.java
@@ -51,7 +51,7 @@
 import static java.util.Collections.singletonList;
 import static org.apache.paimon.CoreOptions.DELETION_VECTORS_ENABLED;
 import static org.apache.paimon.CoreOptions.PARTITION_MARK_DONE_ACTION;
-import static org.apache.paimon.flink.FlinkConnectorOptions.PARTITION_MARK_DONE_WHEN_END_INPUT;
+import static org.apache.paimon.CoreOptions.PARTITION_MARK_DONE_WHEN_END_INPUT;
 import static org.assertj.core.api.Assertions.assertThat;
 
 class PartitionMarkDoneTest extends TableTestBase {
diff --git a/paimon-spark/paimon-spark-common/src/main/scala/org/apache/paimon/spark/commands/WriteIntoPaimonTable.scala b/paimon-spark/paimon-spark-common/src/main/scala/org/apache/paimon/spark/commands/WriteIntoPaimonTable.scala
index fe740ea8ca11..eda39ae1e02d 100644
--- a/paimon-spark/paimon-spark-common/src/main/scala/org/apache/paimon/spark/commands/WriteIntoPaimonTable.scala
+++ b/paimon-spark/paimon-spark-common/src/main/scala/org/apache/paimon/spark/commands/WriteIntoPaimonTable.scala
@@ -18,11 +18,15 @@
 
 package org.apache.paimon.spark.commands
 
+import org.apache.paimon.CoreOptions
 import org.apache.paimon.CoreOptions.DYNAMIC_PARTITION_OVERWRITE
 import org.apache.paimon.options.Options
+import org.apache.paimon.partition.actions.PartitionMarkDoneAction
 import org.apache.paimon.spark._
 import org.apache.paimon.spark.schema.SparkSystemColumns
 import org.apache.paimon.table.FileStoreTable
+import org.apache.paimon.table.sink.CommitMessage
+import org.apache.paimon.utils.{InternalRowPartitionComputer, PartitionPathUtils, TypeUtils}
 
 import org.apache.spark.internal.Logging
 import org.apache.spark.sql.{DataFrame, Row, SparkSession}
@@ -63,9 +67,28 @@ case class WriteIntoPaimonTable(
     val commitMessages = writer.write(data)
     writer.commit(commitMessages)
 
+    markDoneIfNeeded(commitMessages)
     Seq.empty
   }
 
+  private def markDoneIfNeeded(commitMessages: Seq[CommitMessage]): Unit = {
+    val coreOptions = table.coreOptions()
+    if (coreOptions.toConfiguration.get(CoreOptions.PARTITION_MARK_DONE_WHEN_END_INPUT)) {
+      val actions = PartitionMarkDoneAction.createActions(table, table.coreOptions())
+      val partitionComputer = new InternalRowPartitionComputer(
+        coreOptions.partitionDefaultName,
+        TypeUtils.project(table.rowType(), table.partitionKeys()),
+        table.partitionKeys().asScala.toArray
+      )
+      val partitions = commitMessages
+        .map(c => c.partition())
+        .map(p => PartitionPathUtils.generatePartitionPath(partitionComputer.generatePartValues(p)))
+      for (partition <- partitions) {
+        actions.forEach(a => a.markDone(partition))
+      }
+    }
+  }
+
   private def parseSaveMode(): (Boolean, Map[String, String]) = {
     var dynamicPartitionOverwriteMode = false
     val overwritePartition = saveMode match {
diff --git a/paimon-spark/paimon-spark-common/src/test/java/org/apache/paimon/spark/SparkWriteITCase.java b/paimon-spark/paimon-spark-common/src/test/java/org/apache/paimon/spark/SparkWriteITCase.java
index 0cc17639fd80..0ff104eeb13e 100644
--- a/paimon-spark/paimon-spark-common/src/test/java/org/apache/paimon/spark/SparkWriteITCase.java
+++ b/paimon-spark/paimon-spark-common/src/test/java/org/apache/paimon/spark/SparkWriteITCase.java
@@ -36,6 +36,7 @@
 import org.junit.jupiter.api.TestInstance;
 import org.junit.jupiter.api.io.TempDir;
 
+import java.io.IOException;
 import java.util.Arrays;
 import java.util.Comparator;
 import java.util.List;
@@ -318,6 +319,20 @@ public void testChangelogFilePrefixForPkTable() throws Exception {
         Assertions.assertEquals(1, dataFileCount(files2, "test-changelog-"));
     }
 
+    @Test
+    public void testMarkDone() throws IOException {
+        spark.sql(
+                "CREATE TABLE T (a INT, b INT, c STRING) PARTITIONED BY (c) TBLPROPERTIES ("
+                        + "'partition.end-input-to-done' = 'true', 'partition.mark-done-action' = 'success-file')");
+        spark.sql("INSERT INTO T VALUES (1, 1, 'aa')");
+
+        FileStoreTable table = getTable("T");
+        FileIO fileIO = table.fileIO();
+        Path tabLocation = table.location();
+
+        Assertions.assertTrue(fileIO.exists(new Path(tabLocation, "c=aa/_SUCCESS")));
+    }
+
     protected static FileStoreTable getTable(String tableName) {
         return FileStoreTableFactory.create(
                 LocalFileIO.create(),