Releases: antigenomics/vdjdb-db
Releases · antigenomics/vdjdb-db
First Python Version Release
VDJdb score now reflects the generation probability of particular TCR. Fisrst version built entierly on Python.
Hotfix#1 for 2024 summer release
Fixing some typos, adding some papers
Summertime-summertime 2024 release
Content updates accumulated from the last release, many new neoantigens
Celebrate the summer 2023 release
Content updates accumulated from the last release, various
[CONTENT, INFRASTRUCTURE] New studies & docker
Added records:
- PMID:34811538 - TAAs
- PMID:33945786 - SARS-CoV-2/HCoV-HKU1 cross-reactive
- PMID:34880106 - many HIV sequences
- PMID:34793243 - lots of SARS-CoV-2 epitopes/TCRs, similar to 10X compendium
- Updated PDB list
Infrastructure:
- On the way to Docker for database build/release
[INFRASTRUCTURE] VDJdb 2022 infrastructure update
- Optimize and improve VDJdb building
- Generate fancier comprehensive summary statistics
- Link to updated
vdjdb-motifs
motif inference scripts - Cleanup, minor fixes, etc
[CONTENT] 2021-2022 winter dataset pack
More COVID-19 epitopes, HCV-specific TCRs and tumor antigen-reactive TCRs
[CONTENT] September COVID-19 release
A number of datasets from published studies, preprints and private communications with SARS-CoV-2-specific TCRs.
[CONTENT] More TAAs
More studies with tumor-associated antigens + minor fixes/additions to infrastructure
[CONTENT] TAAs
Tumor-associated antigens from multiple studies