DESCRIPTION

Package: SeuratPipe
Type: Package
Title: Packaging common Seurat analysis tasks
Version: 1.0.0
Authors@R: 
    person(given = "Andreas C.",
           family = "Kapourani",
           role = c("aut", "cre"),
           email = "kapouranis.andreas@gmail.com",
           comment = c(ORCID = "0000-0003-2303-1953"))
Description: This package contains common analysis, processing and plotting 
    functions with an attempt to streamline single-cell genomics analysis 
    using the Seurat package.
License: GPL-3 | file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.0
Biarch: true
Depends:
    R (>= 4.0.0)
Imports: 
    assertthat,
    BiocStyle,
    dplyr,
    ggplot2,
    gtools,
    harmony,
    MASS,
    methods,
    patchwork,
    pheatmap,
    RColorBrewer,
    reticulate,
    rlang,
    scales,
    Seurat,
    SoupX,
    stats,
    tibble,
    tidyr,
    utils,
    viridis
Suggests: testthat,
    knitr,
    rmarkdown
VignetteBuilder: knitr
biocViews: GeneExpression,
	Clustering,
	FeatureExtraction,
	RNASeq,
	KEGG, 
	Sequencing, 
	SingleCell
URL: https://andreaskapou.github.io/SeuratPipe/