sepsis3 data

[SZH1230456]

Have you uploaded your dataset into PhysioNet？ I could not download the sepsis-3.zip file as you have given the link. Is there something wrong ? In another way that you introduced following the code, there are a lot of bugs and I could not run it. How can I figure it out?

[jraffa]

The data file is definitely on physionet. You may have to follow the link to the archive of physionet. When I followed the link from this repo it referred me to:
https://archive.physionet.org/works/MIMICIIIDerivedDataRepository/files/approved/sepsis3-mimic/

If you don't have approval to use MIMIC III, that might be one reason you don't have access to it.

As for why the code won't run for you, you'll have to be more specific about the problems you're encountering. The README file gives very thorough instructions, and I would make sure you've followed them very closely.

[tompollard]

@jraffa the archived version is not available to new users. We have discussed migrating the project to a project on the new PhysioNet site, but there is some work involved in doing this.

[cranedroesch]

I can find your archived web page, but I cannot access the actual data.

My physionet password doesn't get me in.

Do you know whether your code in the notebooks still works, or whether the underlying APIs have changed?

[chenmao001]

I can find your archived web page, but I cannot access the actual data.

My physionet password doesn't get me in.

Do you know whether your code in the notebooks still works, or whether the underlying APIs have changed?

Have you found a way to get Sepsis data?

[tomerher]

Hi,
I have physionet account and access to mimic data. However, I'm not able to login and access the sepsis data. Did someone manage to bypass this issue?

[alistairewj]

We need to re-publish the data on the new PhysioNet. Unfortunately we haven't had time to do that yet. For now the links to directly download the dataset will not work.

[littlebear-Alita]

We need to re-publish the data on the new PhysioNet. Unfortunately we haven't had time to do that yet. For now the links to directly download the dataset will not work.

Could you please tell us when you finish re-publish the data on the new Physionet?