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Themisto-v3.2.0 (21 September 2023)
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@jnalanko jnalanko released this 21 Sep 17:21
· 26 commits to master since this release
v3.2.0
38be252

This new minor version adds a new feature --sort-hits and fixes some lingering issues.

  • Added a flag --sort-hits to sort the colors in each output line.
  • Made -d 20 default in index construction. This does not affect pseudoalignment results, but gives a smaller index with little impact on query time
  • Renamed --sort-output to --sort-output-lines. The old name still works to avoid breaking existing scripts.
  • Better error handling in FASTA and FASTQ parsing.
  • Fixed a linking issue with KMC binaries that was crashing tests in debug mode.
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