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Apparently the bio crate contains all the functionality to store sequences compactly, so no reason to do that myself.
Clarification: The compact-genome crate should stay, as it contains the traits for genomes, but it should be enhanced with a compact representation using bio, as well as an abstraction from concrete alphabets using bio.
make plan
add SimpleGenome, CompactGenome and DefaultGenome type aliases where: Simple is the fastest, compact the smallest, and default a good compromise between both.
The text was updated successfully, but these errors were encountered:
Apparently the
bio
crate contains all the functionality to store sequences compactly, so no reason to do that myself.Clarification: The compact-genome crate should stay, as it contains the traits for genomes, but it should be enhanced with a compact representation using
bio
, as well as an abstraction from concrete alphabets usingbio
.SimpleGenome
,CompactGenome
andDefaultGenome
type aliases where: Simple is the fastest, compact the smallest, and default a good compromise between both.The text was updated successfully, but these errors were encountered: