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CHANGELOG
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CHANGELOG
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pre2.0.6
-Fixed bug 3556986.
2.0.5
-Added in support for gurobi5 (Thanks Tim)
-Added in Turner's drawCbMap patch
-Changed default solver to gurobi5 (no longer requires gurobi_mex).
-Updated the SBMLToolbox to 4.1.0 (works with libSBML 5.5.0 - Thanks SBML.org).
2.0.4
-Applied patch to allow for non-integer ids in createTissueSpecificModel
-Added support for solving QP's with gurobi / gurobi_mex
2.0.5 TestAll Results
passedCnt =
17
Tests passed:
testBuildMPS
testDeletionStudy
testElementalBalance
testFBA
testFVA
testGDLS
testGrowthExpMatch
testMOMA
testMaps
testModelManipulation
testOptKnock
testRobustnessAnalysis
testSBML
testSampleCbModel
testgpSampler
testTissueModel
testpFBA
Tests not passed:
testC13Fitting
testSolvers
IT IS NOT NECESSARY FOR THE COBRA TOOLBOX TO PASS ALL TESTS TO FUNCTION; HOWEVER, IT MUST PASS THE TESTS THAT ARE RELEVANT TO YOUR PARTICULAR PROBLEM!!!
Tests may not pass for several reasons. Some of the most common issues:
1. The correct solver is not installed. Certain tests require LP, MILP, QP or NLP solvers. See changeCobraSolvers.m for a complete list of supported solvers.
These tests will fail when running testAll unless one has the tomlab suite installed. If all of the functions that you require for your use function then do not worry about them: testC13Fitting, testGDLS, testMOMA, testOptKnock, testSolvers
If a particular test fails, you can run that test individually for more information
ans =
17 of 19 tests completed successfully.