NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(full_join,DataFrame)
S3method(inner_join,DataFrame)
S3method(left_join,DataFrame)
export("%>%")
export(.LipidomicsExperiment)
export(LipidomicsExperiment)
export(add_sample_annotation)
export(annotate_lipids)
export(as_lipidomics_experiment)
export(de_analysis)
export(de_design)
export(fetch_mw_study)
export(filter_by_cv)
export(gen_lipidsets)
export(impute_na)
export(is_logged)
export(is_normalized)
export(is_summarized)
export(list_mw_studies)
export(lsea)
export(mva)
export(non_parsed_molecules)
export(normalize_istd)
export(normalize_pqn)
export(plot_chain_distribution)
export(plot_class_enrichment)
export(plot_enrichment)
export(plot_lipidclass)
export(plot_molecules)
export(plot_mva)
export(plot_mva_loadings)
export(plot_results_volcano)
export(plot_samples)
export(plot_trend)
export(read_mwTab)
export(read_mw_datamatrix)
export(read_skyline)
export(remove_non_parsed_molecules)
export(set_logged)
export(set_normalized)
export(set_summarized)
export(significant_lipidsets)
export(significant_molecules)
export(summarize_transitions)
export(top_lipids)
export(update_molecule_names)
export(use_interactive_graphics)
exportClasses(LipidomicsExperiment)
import(SummarizedExperiment)
import(dplyr)
import(ggplot2)
import(methods)
importFrom(S4Vectors,"mcols<-")
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,mcols)
importFrom(S4Vectors,metadata)
importFrom(data.table,fread)
importFrom(forcats,fct_drop)
importFrom(forcats,fct_inorder)
importFrom(forcats,fct_recode)
importFrom(imputeLCMD,impute.MinDet)
importFrom(imputeLCMD,impute.MinProb)
importFrom(imputeLCMD,impute.QRILC)
importFrom(imputeLCMD,impute.ZERO)
importFrom(imputeLCMD,impute.wrapper.KNN)
importFrom(imputeLCMD,impute.wrapper.MLE)
importFrom(imputeLCMD,impute.wrapper.SVD)
importFrom(limma,contrasts.fit)
importFrom(limma,eBayes)
importFrom(limma,lmFit)
importFrom(limma,makeContrasts)
importFrom(limma,topTable)
importFrom(magrittr,"%>%")
importFrom(rlang,"!!!")
importFrom(rlang,":=")
importFrom(rlang,UQ)
importFrom(rlang,as_label)
importFrom(rlang,as_name)
importFrom(rlang,is_formula)
importFrom(rlang,quos)
importFrom(rlang,sym)
importFrom(rlang,syms)
importFrom(ropls,opls)
importFrom(stats,cmdscale)
importFrom(stats,dist)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,prcomp)
importFrom(stats,qf)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(stats,var)
importFrom(tidyr,gather)
importFrom(tidyr,separate)
importFrom(tidyr,spread)
importFrom(tidyr,unite)
importFrom(tidyr,unnest)
importFrom(utils,read.delim)
importFrom(utils,read.table)