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Some errors from following the very first lines of SCENIC tutorial:
scenicOptions <- initializeScenic(org=org, dbDir=dbDir, dbs=dbs, datasetTitle=myDatasetTitle, nCores=10)
In initializeScenic(org = org, dbDir = dbDir, dbs = dbs, datasetTitle = myDatasetTitle, :
It was not possible to load the following databses; check whether they are downloaded correctly:
mm9-500bp-upstream-7species.mc9nr.feather
mm9-tss-centered-10kb-7species.mc9nr.feather
The file names and paths are all correct, it seems to not recognise the feather files
Raising as a new question as old ones from sept 2022 have not been addressed on the front page of GitHub. Looks like the current R vignette is not correct - hope the developers can address this ASAP and stop others from wasting time!
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Some errors from following the very first lines of SCENIC tutorial:
The file names and paths are all correct, it seems to not recognise the feather files
Raising as a new question as old ones from sept 2022 have not been addressed on the front page of GitHub. Looks like the current R vignette is not correct - hope the developers can address this ASAP and stop others from wasting time!
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