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procrustesMap gives an error if there are two few points in common between the two maps. realignMap does not give any error or warning.
procrustesMap
realignMap
My ideal behaviour would be an error, similar to the one for procrustesMap.
Low priority to fix for me; I should just stop trying to align maps that have one point in common.
> packageVersion("Racmacs") [1] ‘1.1.35’ > set.seed(850909) > dat <- matrix(10*2^round(10*runif(100)), ncol=10) > map <- make.acmap(dat) Performing 100 optimizations ============================================================================================================ Optimization runs complete Took 0.04 secs > > map1 <- removeAntigens(map, 6:10) > map1 <- removeSera(map1, 6:10) > > map2 <- removeAntigens(map, 1:4) > map2 <- removeSera(map2, 1:5) > > procrustesMap(map1, map2) Error: Not enough matching points (1) > realignMap(map1,map2) <acmap> ...5 antigens ...5 sera ...100 optimizations > map1 <- removeAntigens(map, 6:10) > map1 <- removeSera(map1, 6:10) > > map2 <- removeAntigens(map, 1:5) > map2 <- removeSera(map2, 1:5) > > procrustesMap(map1, map2) Error: Not enough matching points (0) > realignMap(map1,map2) <acmap> ...5 antigens ...5 sera ...100 optimizations map1 <- removeAntigens(map, 6:10) map1 <- removeSera(map1, 6:10) map2 <- removeAntigens(map, 1:3) map2 <- removeSera(map2, 1:5) procrustesMap(map1, map2) realignMap(map1,map2)
The text was updated successfully, but these errors were encountered:
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procrustesMap
gives an error if there are two few points in common between the two maps.realignMap
does not give any error or warning.My ideal behaviour would be an error, similar to the one for
procrustesMap
.Low priority to fix for me; I should just stop trying to align maps that have one point in common.
The text was updated successfully, but these errors were encountered: