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roof plate and neural tube #132

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cmungall opened this issue Feb 2, 2017 · 2 comments
Open

roof plate and neural tube #132

cmungall opened this issue Feb 2, 2017 · 2 comments
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@cmungall
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cmungall commented Feb 2, 2017

  • id: ZFA:0007058
  • name: roof plate
  • namespace: zebrafish_anatomy
  • def: "Multi-tissue structure that is the dorsal-most aspect of the developing neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880]

trying to figure the difference between the two marked:

   po ZFA:0007058 ! roof plate ***  [end: "Juvenile:Days 45-89"] [start: "Segmentation:10-13 somites"]
        po ZFA:0000355 ! roof plate midbrain region [end: "Pharyngula:Prim-5"] [start: "Segmentation:10-13 somites"]
        po ZFA:0001177 ! roof plate spinal cord region [end: "Juvenile:Days 45-89"] [start: "Pharyngula:Prim-5"]
        po ZFA:0001311 ! roof plate rhombomere region [end: "Juvenile:Days 45-89"] [start: "Segmentation:10-13 somites"]
        po ZFA:0001358 ! roof plate diencephalic region [end: "Juvenile:Days 45-89"] [start: "Segmentation:10-13 somites"]
        po ZFA:0001436 ! roof plate neural tube region *** [end: "Pharyngula:Prim-5"] [start: "Segmentation:14-19 somites"]

RP is defined as being the dorsalmost part of the NT, which would make it equivalent to RPNTR

RPNTR is temporally coincident with NT. What is confusing is that RP is temporally narrower, despite it being a part-of parent

@cerivs
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cerivs commented Sep 1, 2017

My first guess is that we are dealing with some tricky developmental stage stuff here.

@ybradford
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I think we need to merge these

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