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I am new to cBioportal. When following the python client tutorial from bravado.client import SwaggerClient cbioportal = SwaggerClient.from_url('https://www.cbioportal.org/api/api-docs', config={"validate_requests":False,"validate_responses":False,"validate_swagger_spec": False})
I got the following error.
bravado.exception.HTTPFound: 302
The following is the complete pip install logs and reproduced error.
from bravado.client import Swaggerclient
Traceback (most recent call last):
File "", line 1, in
ImportError: cannot import name 'Swaggerclient' from 'bravado.client' (/Users/user/miniforge3/envs/tensorflow/lib/python3.9/site-packages/bravado/client.py)
from bravado.client import SwaggerClient
cbioportal = SwaggerClient.from_url('https://www.cbioportal.org/api/api-docs', config={"validate_requests": False, "validate_responses": False, "validate_swagger_spec": False})
Traceback (most recent call last):
File "", line 1, in
File "/Users/user/miniforge3/envs/tensorflow/lib/python3.9/site-packages/bravado/client.py", line 98, in from_url
spec_dict = loader.load_spec(spec_url)
File "/Users/user/miniforge3/envs/tensorflow/lib/python3.9/site-packages/bravado/swagger_model.py", line 101, in load_spec
response = request(
File "/Users/user/miniforge3/envs/tensorflow/lib/python3.9/site-packages/bravado/http_future.py", line 282, in result
raise make_http_exception(response=incoming_response)
bravado.exception.HTTPFound: 302
The text was updated successfully, but these errors were encountered:
machine: MacBook Pro M2
python: 3.9.5
I am new to cBioportal. When following the python client tutorial
from bravado.client import SwaggerClient cbioportal = SwaggerClient.from_url('https://www.cbioportal.org/api/api-docs', config={"validate_requests":False,"validate_responses":False,"validate_swagger_spec": False})
I got the following error.
The following is the complete pip install logs and reproduced error.
(tensorflow) laptop:~ user$ pip install bravado
Collecting bravado
Downloading bravado-11.0.3-py2.py3-none-any.whl (38 kB)
Requirement already satisfied: typing-extensions in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from bravado) (4.3.0)
Collecting bravado-core>=5.16.1
Downloading bravado_core-5.17.0-py2.py3-none-any.whl (67 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 67.5/67.5 kB 2.1 MB/s eta 0:00:00
Requirement already satisfied: pyyaml in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from bravado) (6.0)
Requirement already satisfied: requests>=2.17 in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from bravado) (2.28.1)
Requirement already satisfied: six in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from bravado) (1.16.0)
Collecting msgpack
Downloading msgpack-1.0.4-cp39-cp39-macosx_11_0_arm64.whl (69 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 69.8/69.8 kB 2.3 MB/s eta 0:00:00
Requirement already satisfied: python-dateutil in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from bravado) (2.8.2)
Collecting simplejson
Downloading simplejson-3.17.6-cp39-cp39-macosx_11_0_arm64.whl (73 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 73.6/73.6 kB 2.5 MB/s eta 0:00:00
Collecting monotonic
Downloading monotonic-1.6-py2.py3-none-any.whl (8.2 kB)
Collecting swagger-spec-validator>=2.0.1
Downloading swagger_spec_validator-2.7.4-py2.py3-none-any.whl (27 kB)
Collecting jsonref
Downloading jsonref-0.2-py3-none-any.whl (9.3 kB)
Requirement already satisfied: pytz in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from bravado-core>=5.16.1->bravado) (2022.2.1)
Collecting jsonschema[format]>=2.5.1
Downloading jsonschema-4.14.0-py3-none-any.whl (82 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 82.4/82.4 kB 5.4 MB/s eta 0:00:00
Requirement already satisfied: charset-normalizer<3,>=2 in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from requests>=2.17->bravado) (2.1.1)
Requirement already satisfied: urllib3<1.27,>=1.21.1 in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from requests>=2.17->bravado) (1.26.11)
Requirement already satisfied: idna<4,>=2.5 in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from requests>=2.17->bravado) (3.3)
Requirement already satisfied: certifi>=2017.4.17 in ./miniforge3/envs/tensorflow/lib/python3.9/site-packages (from requests>=2.17->bravado) (2022.6.15)
Collecting pyrsistent!=0.17.0,!=0.17.1,!=0.17.2,>=0.14.0
Downloading pyrsistent-0.18.1-cp39-cp39-macosx_10_9_universal2.whl (81 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 81.4/81.4 kB 2.6 MB/s eta 0:00:00
Collecting attrs>=17.4.0
Downloading attrs-22.1.0-py2.py3-none-any.whl (58 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 58.8/58.8 kB 1.9 MB/s eta 0:00:00
Collecting webcolors>=1.11
Downloading webcolors-1.12-py3-none-any.whl (9.9 kB)
Collecting jsonpointer>1.13
Downloading jsonpointer-2.3-py2.py3-none-any.whl (7.8 kB)
Collecting uri-template
Downloading uri_template-1.2.0-py3-none-any.whl (10 kB)
Collecting rfc3987
Downloading rfc3987-1.3.8-py2.py3-none-any.whl (13 kB)
Collecting isoduration
Downloading isoduration-20.11.0-py3-none-any.whl (11 kB)
Collecting fqdn
Downloading fqdn-1.5.1-py3-none-any.whl (9.1 kB)
Collecting rfc3339-validator
Downloading rfc3339_validator-0.1.4-py2.py3-none-any.whl (3.5 kB)
Collecting arrow>=0.15.0
Downloading arrow-1.2.2-py3-none-any.whl (64 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 64.0/64.0 kB 2.2 MB/s eta 0:00:00
Installing collected packages: rfc3987, msgpack, monotonic, jsonref, webcolors, uri-template, simplejson, rfc3339-validator, pyrsistent, jsonpointer, fqdn, attrs, jsonschema, arrow, swagger-spec-validator, isoduration, bravado-core, bravado
Successfully installed arrow-1.2.2 attrs-22.1.0 bravado-11.0.3 bravado-core-5.17.0 fqdn-1.5.1 isoduration-20.11.0 jsonpointer-2.3 jsonref-0.2 jsonschema-4.14.0 monotonic-1.6 msgpack-1.0.4 pyrsistent-0.18.1 rfc3339-validator-0.1.4 rfc3987-1.3.8 simplejson-3.17.6 swagger-spec-validator-2.7.4 uri-template-1.2.0 webcolors-1.12
(tensorflow) laptop:~ user$ python
Python 3.9.5 | packaged by conda-forge | (default, Jun 19 2021, 00:24:55)
[Clang 11.1.0 ] on darwin
Type "help", "copyright", "credits" or "license" for more information.
The text was updated successfully, but these errors were encountered: