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Singularity container support for run script #21

Singularity container support for run script

Singularity container support for run script #21

name: SingularityQuicktest
on:
pull_request:
branches: [ dev ]
push:
branches: [ dev ]
jobs:
build_quicktest_singularity:
name: Build and quicktest Singularity container
runs-on: ubuntu-22.04
steps:
- name: Reclaim storage
run: |
docker image prune -a -f
sudo rm -rf /usr/share/dotnet
sudo rm -rf /usr/local/lib/android
- name: Checkout
uses: actions/checkout@v3
- name: Set up Docker
uses: docker/setup-buildx-action@v2
with:
driver: docker
- name: Set up Singularity
run: |
sudo add-apt-repository -y ppa:apptainer/ppa
sudo apt update
sudo apt install -y apptainer
alias singularity="apptainer"
- name: Build Docker image
uses: docker/build-push-action@v4
with:
file: docker/Dockerfile.finn
context: .
load: true
no-cache: true
tags: finn_docker_export:latest
- name: Build Singularity image
run: |
mkdir $GITHUB_WORKSPACE/singularity_tmp
export APPTAINER_TMPDIR=$GITHUB_WORKSPACE/singularity_tmp
singularity build --disable-cache finn_singularity_image.sif docker-daemon://finn_docker_export:latest
- name: Run quicktest
run: |
export FINN_SINGULARITY=finn_singularity_image.sif
./run-docker.sh quicktest