Singularity container support for run script #12
Workflow file for this run
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name: SingularityQuicktest | |
on: | |
pull_request: | |
branches: [ dev ] | |
push: | |
branches: [ dev ] | |
jobs: | |
build_and_test: | |
name: Build and test Singularity container | |
runs-on: ubuntu-22.04 | |
steps: | |
- name: Maximize build space | |
uses: easimon/maximize-build-space@master | |
with: | |
root-reserve-mb: '32768' | |
swap-size-mb: '128' | |
remove-docker-images: 'true' | |
remove-android: 'true' | |
remove-haskell: 'true' | |
remove-codeql: 'true' | |
remove-dotnet: 'true' | |
- name: Checkout | |
uses: actions/checkout@v3 | |
- name: Set up Docker | |
uses: docker/setup-buildx-action@v2 | |
with: | |
driver: docker | |
- name: Set up Singularity | |
run: | | |
sudo add-apt-repository -y ppa:apptainer/ppa | |
sudo apt update | |
sudo apt install -y apptainer | |
alias singularity="apptainer" | |
- name: Build Docker image | |
uses: docker/build-push-action@v4 | |
with: | |
file: docker/Dockerfile.finn | |
context: . | |
load: true | |
no-cache: true | |
tags: finn_docker_export:latest | |
- name: Check free space | |
run: df -h | |
- name: Clean Docker build cache | |
run: echo 'y' | docker builder prune | |
- name: Check free space | |
run: df -h | |
- name: Build Singularity image | |
run: singularity build finn_singularity_image.sif docker-daemon://finn_docker_export:latest | |
- name: Run quicktest | |
run: | | |
export FINN_ROOT=$(pwd) | |
export FINN_BUILD_DIR=/tmp/finn_gha | |
export FINN_INST_NAME=finn_gha | |
export FINN_SINGULARITY=finn_singularity_image.sif | |
./run-docker.sh quicktest |