_config.yml

# -----------------------------------------------------------------------------
# Site settings
# -----------------------------------------------------------------------------

title: blank # the website title (if blank, full name will be used instead)
first_name: Winston
middle_name: 
last_name: Chen
email: chenwt@uw.edu
description: > # the ">" symbol means to ignore newlines until "footer_text:"
  Aspiring ML researcher in computational biology.
footer_text: >
  Powered by <a href="http://jekyllrb.com/" target="_blank">Jekyll</a> with <a href="https://github.com/alshedivat/al-folio">al-folio</a> theme.
  Hosted by <a href="https://pages.github.com/" target="_blank">GitHub Pages</a>.

lang: en # the language of your site (for example: en, fr, cn, ru, etc.)
icon: 🐥 # the emoji used as the favicon
url: https://WinstonChenn.github.io # the base hostname & protocol for your site
baseurl:  # the subpath of your site, e.g. /blog/
last_updated: true # set to true if you want to display last updated in the footer
impressum_path:  # set to path to include impressum link in the footer, use the same path as permalink in a page, helps to conform with EU GDPR

# -----------------------------------------------------------------------------
# RSS Feed
# -----------------------------------------------------------------------------
# will use title and url fields
# Take a look to https://github.com/jekyll/jekyll-feed for more customization

# -----------------------------------------------------------------------------
# Layout
# -----------------------------------------------------------------------------

navbar_fixed: true
footer_fixed: true

# Dimensions
max_width: 800px

# TODO: add layout settings (single page vs. multi-page)

# -----------------------------------------------------------------------------
# Open Graph
# -----------------------------------------------------------------------------
# Display links to the page with a preview object on social media.
serve_og_meta: false # Include Open Graph meta tags in the HTML head
og_image: # The site-wide (default for all links) Open Graph preview image

# -----------------------------------------------------------------------------
# Social integration
# -----------------------------------------------------------------------------

github_username: WinstonChenn
gitlab_username: # your GitLab user name
twitter_username: "@Winston19990918"
linkedin_username: winstonchenn
scholar_userid: # your Google Scholar ID
orcid_id: # your ORCID ID
medium_username: # your Medium username
quora_username: # your Quora username
publons_id: # your ID on Publons
research_gate_profile: # your profile on ResearchGate
blogger_url: # your blogger URL
work_url: # work page URL
keybase_username: # your keybase user name
wikidata_id: # your wikidata id
dblp_url: # your DBLP profile url
stackoverflow_id: #your stackoverflow id

rss_icon: true

contact_note: 

google_analytics: UA-215652656-1 # out your google-analytics code
panelbear_analytics: XXXXXXXXX # panelbear analytics site ID

# -----------------------------------------------------------------------------
# Blog
# -----------------------------------------------------------------------------

blog_name:  # your blog must have a name for it to show up in the nav bar
blog_description: a simple whitespace theme for academics
permalink: /blog/:year/:title/

# Pagination
pagination:
  enabled: true

# Comments
disqus_shortname: al-folio # put your disqus shortname
# https://help.disqus.com/en/articles/1717111-what-s-a-shortname

# -----------------------------------------------------------------------------
# Collections
# -----------------------------------------------------------------------------

collections:
  news:
    defaults:
      layout: post
    output: true
    permalink: /news/:path/
  projects:
    output: true
    permalink: /projects/:path/
  teaching: 
    output: true
    permalink: /teaching/:path/
  industry:
    output: true
    permalink: /industry/:path/
  awards: 
    output: true
    permalink: /awards/:path/
  

news_limit: 5

# -----------------------------------------------------------------------------
# Jekyll settings
# -----------------------------------------------------------------------------

# Markdown and syntax highlight
markdown: kramdown
highlighter: rouge
highlight_theme: github  # https://github.com/jwarby/jekyll-pygments-themes
kramdown:
  input: GFM
  syntax_highlighter_opts:
    css_class: 'highlight'
    span:
      line_numbers: false
    block:
      line_numbers: false
      start_line: 1

# Includes & excludes
include: ['_pages']
exclude:
  - bin
  - Gemfile
  - Gemfile.lock
  - vendor
keep_files:
  - CNAME
  - .nojekyll
  - .git

# Plug-ins
plugins:
  - jekyll-archives
  - jekyll-diagrams
  - jekyll-email-protect
  - jekyll-feed
  - jekyll-github-metadata
  - jekyll-paginate-v2
  - jekyll-responsive-image
  - jekyll/scholar
  - jekyll-sitemap
  - jekyll-target-blank
  - jekyll-twitter-plugin
  - jemoji

# Sitemap settings
defaults:
  - scope:
      path:            "assets/**/*.*"
    values:
      sitemap:         false

# Extras
github: [metadata]

# -----------------------------------------------------------------------------
# Jekyll Archives
# -----------------------------------------------------------------------------

jekyll-archives:
  enabled: [year, tags, categories] # enables year, tag and category archives (remove if you need to disable one of them). 
  layouts:
    year: archive-year
    tag: archive-tag
    category: archive-category
  permalinks:
    year: '/blog/:year/'
    tag: '/blog/tag/:name/'
    category: '/blog/category/:name/'

# -----------------------------------------------------------------------------
# Jekyll Scholar
# -----------------------------------------------------------------------------

scholar:

  last_name: Einstein
  first_name: [Albert, A.]

  style: apa
  locale: en

  source: /_bibliography/
  bibliography: papers.bib
  bibliography_template: bib
  # Note: if you have latex math in your bibtex, the latex filter
  # preprocessing may conflict with MathJAX if the latter is enabled.
  # See https://github.com/alshedivat/al-folio/issues/357.
  bibtex_filters: [latex, smallcaps, superscript]

  replace_strings: true
  join_strings: true

  details_dir: bibliography
  details_layout: bibtex.html
  details_link: Details

  query: "@*"


# -----------------------------------------------------------------------------
# Jekyll Responsive Images
# -----------------------------------------------------------------------------

responsive_image:
  template: _includes/responsive_img.html
  # Quality to use when resizing images.
  default_quality: 80
  sizes:
    - width: 480
    - width: 800
    - width: 1400
      quality: 90
  # Strip EXIF and other JPEG profiles. Helps to minimize JPEG size.
  strip: true


# -----------------------------------------------------------------------------
# Jekyll Diagrams
# -----------------------------------------------------------------------------

jekyll-diagrams:
    # configuration, see https://github.com/zhustec/jekyll-diagrams.
    # feel free to comment out this section if not using jekyll diagrams.

# -----------------------------------------------------------------------------
# Optional Features
# -----------------------------------------------------------------------------

enable_google_analytics:    false  # enables google analytics
enable_panelbear_analytics: false  # enables panelbear analytics
enable_mansory:             true   # enables automatic project cards arangement
enable_math:                true   # enables math typesetting (uses MathJax)
enable_tooltips:            false  # enables automatic tooltip links generated
                                   # for each section titles on pages and posts
enable_darkmode:            true   # enables switching between light/dark modes
enable_navbar_social:       false  # enables displaying social links in the
                                   # navbar on the about page
enable_project_categories:  true   # enables categorization of projects into
                                   # multiple categories
enable_medium_zoom:         true   # enables image zoom feature (as on medium.com)

# -----------------------------------------------------------------------------
# Library versions
# -----------------------------------------------------------------------------

academicons:
  version: "1.9.0"
  integrity: "sha512-W4yqoT1+8NLkinBLBZko+dFB2ZbHsYLDdr50VElllRcNt2Q4/GSs6u71UHKxB7S6JEMCp5Ve4xjh3eGQl/HRvg=="
bootstrap:
  version: "4.5.2"
  integrity:
    css: "sha512-MoRNloxbStBcD8z3M/2BmnT+rg4IsMxPkXaGh2zD6LGNNFE80W3onsAhRcMAMrSoyWL9xD7Ert0men7vR8LUZg=="
    js: "sha512-M5KW3ztuIICmVIhjSqXe01oV2bpe248gOxqmlcYrEzAvws7Pw3z6BK0iGbrwvdrUQUhi3eXgtxp5I8PDo9YfjQ=="
fontawesome:
  version: "5.14.0"
  integrity: "sha512-1PKOgIY59xJ8Co8+NE6FZ+LOAZKjy+KY8iq0G4B3CyeY6wYHN3yt9PW0XpSriVlkMXe40PTKnXrLnZ9+fkDaog=="
jquery:
  version: "3.5.1"
  integrity: "sha512-bLT0Qm9VnAYZDflyKcBaQ2gg0hSYNQrJ8RilYldYQ1FxQYoCLtUjuuRuZo+fjqhx/qtq/1itJ0C2ejDxltZVFg=="
mathjax:
  version: "3.2.0"
mansory:
  version: "4.2.2"
  integrity: "sha256-Nn1q/fx0H7SNLZMQ5Hw5JLaTRZp0yILA/FRexe19VdI="
mdb:
  version: "4.19.1"
  integrity:
    css: "sha512-RO38pBRxYH3SoOprtPTD86JFOclM51/XTIdEPh5j8sj4tp8jmQIx26twG52UaLi//hQldfrh7e51WzP9wuP32Q=="
    js: "sha512-Mug9KHKmroQFMLm93zGrjhibM2z2Obg9l6qFG2qKjXEXkMp/VDkI4uju9m4QKPjWSwQ6O2qzZEnJDEeCw0Blcw=="
popper:
  version: "2.4.4"
  integrity: "sha512-eUQ9hGdLjBjY3F41CScH3UX+4JDSI9zXeroz7hJ+RteoCaY+GP/LDoM8AO+Pt+DRFw3nXqsjh9Zsts8hnYv8/A=="
medium_zoom:
  version: "1.0.6"
  integrity: "sha256-EdPgYcPk/IIrw7FYeuJQexva49pVRZNmt3LculEr7zM="