diff --git a/.gitignore b/.gitignore index df84cb7b..c3a4e766 100644 --- a/.gitignore +++ b/.gitignore @@ -1,6 +1,4 @@ -# Ignore all files except the README -# NOTE (BNR): A .gitignore file is used in workflow/report because I couldn't get -# the top-level gitignore working right. +Manifest.toml resources/* !resources/README.md diff --git a/Manifest.toml b/Manifest.toml deleted file mode 100644 index f4ff0d90..00000000 --- a/Manifest.toml +++ /dev/null @@ -1,1400 +0,0 @@ -# This file is machine-generated - editing it directly is not advised - -julia_version = "1.9.0" -manifest_format = "2.0" -project_hash = "969a2a7cbf61f665cee7bd942b0f9737c9709c4e" - -[[deps.AbstractFFTs]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "d92ad398961a3ed262d8bf04a1a2b8340f915fef" -uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.5.0" -weakdeps = ["ChainRulesCore", "Test"] - - [deps.AbstractFFTs.extensions] - AbstractFFTsChainRulesCoreExt = "ChainRulesCore" - AbstractFFTsTestExt = "Test" - -[[deps.Accessors]] -deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Requires", "Test"] -git-tree-sha1 = "954634616d5846d8e216df1298be2298d55280b2" -uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.32" - 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-[[deps.libsixel_jll]] -deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Pkg", "libpng_jll"] -git-tree-sha1 = "d4f63314c8aa1e48cd22aa0c17ed76cd1ae48c3c" -uuid = "075b6546-f08a-558a-be8f-8157d0f608a5" -version = "1.10.3+0" - -[[deps.nghttp2_jll]] -deps = ["Artifacts", "Libdl"] -uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" -version = "1.48.0+0" - -[[deps.p7zip_jll]] -deps = ["Artifacts", "Libdl"] -uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" -version = "17.4.0+0" diff --git a/src/h5.jl b/src/h5.jl index cf841af7..4382ddad 100644 --- a/src/h5.jl +++ b/src/h5.jl @@ -1,28 +1,3 @@ -function getiftversion() - deps = Pkg.dependencies() - iftversion = [] - for (_, dep) in deps - dep.is_direct_dep || continue - dep.version === nothing && continue - dep.name != "IceFloeTracker" && continue - push!(iftversion, dep.version) - break - end - - # For CI tests where IceFloeTracker is not a dependency - try - ift = iftversion[1] - catch - return "unknown" - end - - ift = iftversion[1] - maj = Int(ift.major) - min = Int(ift.minor) - patch = Int(ift.patch) - return "v$maj.$min.$patch" -end - """ makeh5filename(imgfname, ts) @@ -122,11 +97,9 @@ Each HDF5 file has the following structure: The `floe_properties` group contains a floe properties matrix `properties` for `labeled_image` and associated `column_names`. The `index` group contains the spatial coordinates in the source image coordinate reference system (default NSIDC polar stereographic, meters) and geographic coordinates (latitude and longitude, decimal degrees). Estimated satellite overpass time `time` is provided in Unix timestamp format (seconds since 1970-01-01 00:00 UTC). """ -function makeh5files(; pathtosampleimg::String, resdir::String) +function makeh5files(; pathtosampleimg::String, resdir::String, iftversion=IceFloeTracker.IFTVERSION) latlondata = getlatlon(pathtosampleimg) - iftversion = getiftversion() - ptpath = joinpath(resdir, "passtimes.jls") passtimes = deserialize(ptpath) ptsunix = Int64.(Dates.datetime2unix.(passtimes)) @@ -153,7 +126,7 @@ function makeh5files(; pathtosampleimg::String, resdir::String) # Add top-level attributes attrs(file)["fname_reflectance"] = reflectance_refs[i] attrs(file)["fname_truecolor"] = truecolor_refs[i] - attrs(file)["iftversion"] = iftversion + attrs(file)["iftversion"] = string(iftversion) attrs(file)["crs"] = latlondata["crs"] attrs(file)["reference"] = "https://doi.org/10.1016/j.rse.2019.111406" attrs(file)["contact"] = "mmwilhelmus@brown.edu" diff --git a/test/test-h5.jl b/test/test-h5.jl index f59de688..7c170608 100644 --- a/test/test-h5.jl +++ b/test/test-h5.jl @@ -10,8 +10,6 @@ getcorners(m) = [m[1, 1], m[end, end]] latcorners = getcorners(latlondata["latitude"]) loncorners = getcorners(latlondata["longitude"]) -iftversion = IFTPipeline.getiftversion() - ptpath = joinpath(resdir, "passtimes.jls") passtimes = deserialize(ptpath) ptsunix = Int64.(Dates.datetime2unix.(passtimes)) @@ -44,7 +42,7 @@ h5path = joinpath(resdir, "hdf5-files", "20220914T1244.aqua.labeled_image.250m.h @test typeof(fid) == HDF5.File # top level attributes - @test attrs(fid)["iftversion"] == iftversion + @test attrs(fid)["iftversion"] == string(IceFloeTracker.IFTVERSION) @test attrs(fid)["fname_reflectance"] == reflectance_refs[1] @test attrs(fid)["fname_truecolor"] == truecolor_refs[1] @test attrs(fid)["crs"] == latlondata["crs"]