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hfs.yml
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name: hfs
channels:
- r
- pytorch
- bioconda
- conda-forge
- anaconda
- intel
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=5.1=1_gnu
- _r-mutex=1.0.0=anacondar_1
- _r-xgboost-mutex=2.0=cpu_0
- abseil-cpp=20210324.1=h9c3ff4c_0
- argcomplete=1.12.3=pyhd3eb1b0_0
- arrow-cpp=4.0.0=py36h0c733d3_3_cpu
- aws-c-cal=0.5.10=h3622835_0
- aws-c-common=0.5.11=h7f98852_0
- aws-c-event-stream=0.2.7=hd2d8ebb_9
- aws-c-io=0.10.2=he6d800f_1
- aws-checksums=0.1.11=hc0e0e8b_6
- aws-sdk-cpp=1.8.186=h9ad65fb_2
- bayesian-optimization=1.4.0=pyhd8ed1ab_0
- bcftools=1.9=ha228f0b_4
- bedtools=2.30.0=h7d7f7ad_2
- bgenix=1.1.7=h5589359_3
- binutils_impl_linux-64=2.33.1=he6710b0_7
- binutils_linux-64=2.33.1=h9595d00_15
- blas=1.0=mkl
- boost-cpp=1.70.0=ha2d47e9_1
- brotli=1.0.9=h9c3ff4c_4
- brotlipy=0.7.0=py36h27cfd23_1003
- bwidget=1.9.11=1
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.18.1=h7f8727e_0
- ca-certificates=2023.08.22=h06a4308_0
- cairo=1.16.0=h19f5f5c_2
- certifi=2021.5.30=py36h06a4308_0
- cffi=1.14.6=py36h400218f_0
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- cmake=3.14.0=h52cb24c_0
- cryptography=35.0.0=py36hd23ed53_0
- cudatoolkit=10.2.89=hfd86e86_1
- curl=7.76.1=h979ede3_1
- cycler=0.11.0=pyhd3eb1b0_0
- dataclasses=0.8=pyh4f3eec9_6
- datamash=1.1.0=0
- dbus=1.13.18=hb2f20db_0
- docopt=0.6.2=py36h06a4308_0
- dxpy=0.325.1=pyh5e36f6f_1
- expat=2.4.4=h295c915_0
- ffmpeg=4.2.2=h20bf706_0
- fontconfig=2.13.1=h6c09931_0
- freetype=2.11.0=h70c0345_0
- fribidi=1.0.10=h7b6447c_0
- gcc_impl_linux-64=7.3.0=habb00fd_1
- gcc_linux-64=7.3.0=h553295d_15
- gettext=0.21.0=hf68c758_0
- gflags=2.2.2=he1b5a44_1004
- gfortran_impl_linux-64=7.3.0=hdf63c60_1
- gfortran_linux-64=7.3.0=h553295d_15
- git=2.32.0=pl5262hc120c5b_1
- glib=2.69.1=h4ff587b_1
- glog=0.5.0=h48cff8f_0
- gmp=6.2.1=h295c915_3
- gnutls=3.6.15=he1e5248_0
- graphite2=1.3.14=h295c915_1
- grpc-cpp=1.37.1=h2519f57_2
- gsl=2.4=h14c3975_4
- gst-plugins-base=1.14.0=h8213a91_2
- gstreamer=1.14.0=h28cd5cc_2
- gxx_impl_linux-64=7.3.0=hdf63c60_1
- gxx_linux-64=7.3.0=h553295d_15
- h5py=2.10.0=py36hd6299e0_1
- harfbuzz=4.3.0=hd55b92a_0
- hdf5=1.10.6=hb1b8bf9_0
- htseq=0.11.3=py36hb3f55d8_0
- htslib=1.9=ha228f0b_7
- icu=58.2=he6710b0_3
- idna=3.3=pyhd3eb1b0_0
- importlib-metadata=4.8.1=py36h06a4308_0
- importlib_metadata=4.8.1=hd3eb1b0_0
- intel-openmp=2022.0.1=h06a4308_3633
- intelpython=2022.1.0=0
- joblib=1.2.0=pyhd8ed1ab_0
- jpeg=9e=h7f8727e_0
- kiwisolver=1.3.1=py36h2531618_0
- krb5=1.17.1=h173b8e3_0
- lame=3.100=h7b6447c_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.33.1=h53a641e_7
- libcurl=7.76.1=hc4aaa36_1
- libdeflate=1.0=h14c3975_1
- libedit=3.1.20210910=h7f8727e_0
- libev=4.33=h7f8727e_1
- libevent=2.1.10=h9b69904_4
- libffi=3.3=he6710b0_2
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=11.2.0=h1234567_1
- libgfortran-ng=7.5.0=ha8ba4b0_17
- libgfortran4=7.5.0=ha8ba4b0_17
- libgomp=11.2.0=h1234567_1
- libiconv=1.16=h7f8727e_2
- libidn2=2.3.2=h7f8727e_0
- libnghttp2=1.46.0=hce63b2e_0
- libopus=1.3.1=h7b6447c_0
- libpng=1.6.37=hbc83047_0
- libprotobuf=3.16.0=h780b84a_0
- libssh2=1.10.0=h8f2d780_0
- libstdcxx-ng=11.2.0=h1234567_1
- libtasn1=4.16.0=h27cfd23_0
- libthrift=0.14.1=he6d91bd_2
- libtiff=4.2.0=h85742a9_0
- libunistring=0.9.10=h27cfd23_0
- libutf8proc=2.7.0=h7f98852_0
- libuuid=1.0.3=h7f8727e_2
- libuv=1.40.0=h7b6447c_0
- libvpx=1.7.0=h439df22_0
- libwebp-base=1.2.2=h7f8727e_0
- libxcb=1.15=h7f8727e_0
- libxgboost=1.4.0=h9c3ff4c_0
- libxml2=2.9.14=h74e7548_0
- lz4-c=1.9.3=h295c915_1
- make=4.2.1=h1bed415_1
- matplotlib=3.3.4=py36h06a4308_0
- matplotlib-base=3.3.4=py36h62a2d02_0
- mkl=2020.2=256
- mkl-service=2.3.0=py36he8ac12f_0
- mkl_fft=1.3.0=py36h54f3939_0
- mkl_random=1.1.1=py36h0573a6f_0
- mysql-connector-c=6.1.11=h24aacaa_2
- ncurses=6.3=h7f8727e_2
- nettle=3.7.3=hbbd107a_1
- numpy=1.19.2=py36h54aff64_0
- numpy-base=1.19.2=py36hfa32c7d_0
- olefile=0.46=py36_0
- openh264=2.1.1=h4ff587b_0
- openjdk=11.0.13=h87a67e3_0
- openjpeg=2.4.0=h3ad879b_0
- openssl=1.1.1w=h7f8727e_0
- orc=1.6.7=h89a63ab_2
- pandas=1.1.5=py36h284efc9_0
- pango=1.50.7=h05da053_0
- parallel=20220522=ha770c72_0
- parquet-cpp=1.5.1=2
- pcre=8.45=h295c915_0
- pcre2=10.35=h14c3975_1
- perl=5.26.2=h14c3975_0
- picard=2.27.4=hdfd78af_0
- pillow=8.3.1=py36h2c7a002_0
- pip=21.2.2=py36h06a4308_0
- pixman=0.40.0=h7f8727e_1
- plink=1.90b6.21=hec16e2b_2
- psutil=5.8.0=py36h27cfd23_1
- pyarrow=4.0.0=py36h6200943_3_cpu
- pycparser=2.21=pyhd3eb1b0_0
- pyopenssl=22.0.0=pyhd3eb1b0_0
- pyparsing=3.0.4=pyhd3eb1b0_0
- pyqt=5.9.2=py36h05f1152_2
- pysocks=1.7.1=py36h06a4308_0
- python=3.6.13=h12debd9_1
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python_abi=3.6=2_cp36m
- pytorch-mutex=1.0=cuda
- pytz=2021.3=pyhd3eb1b0_0
- qt=5.9.7=h5867ecd_1
- r-assertthat=0.2.1=r36h6115d3f_2
- r-base=3.6.1=haffb61f_2
- r-cli=2.5.0=r36hc72bb7e_0
- r-colorspace=2.0_1=r36hcfec24a_0
- r-crayon=1.4.1=r36hc72bb7e_0
- r-data.table=1.14.0=r36hcfec24a_0
- r-digest=0.6.27=r36h03ef668_0
- r-ellipsis=0.3.2=r36hcfec24a_0
- r-fansi=0.4.2=r36hcfec24a_0
- r-farver=2.1.0=r36h03ef668_0
- r-ggplot2=3.2.1=r36h6115d3f_0
- r-glue=1.4.2=r36hcfec24a_0
- r-gtable=0.3.0=r36h6115d3f_3
- r-jsonlite=1.7.2=r36hcfec24a_0
- r-labeling=0.4.2=r36h142f84f_0
- r-lattice=0.20_38=r36h96ca727_0
- r-lazyeval=0.2.2=r36hcfec24a_2
- r-lifecycle=1.0.0=r36hc72bb7e_0
- r-magrittr=2.0.1=r36hcfec24a_1
- r-mass=7.3_54=r36hcfec24a_0
- r-matrix=1.2_17=r36h96ca727_0
- r-mgcv=1.8_28=r36h96ca727_0
- r-mixsqp=0.2_2=r36h0357c0b_0
- r-munsell=0.5.0=r36h6115d3f_1003
- r-nlme=3.1_139=r36ha65eedd_0
- r-parallelly=1.25.0=r36hc72bb7e_0
- r-pillar=1.6.1=r36hc72bb7e_0
- r-pkgconfig=2.0.3=r36h6115d3f_1
- r-plyr=1.8.6=r36h0357c0b_1
- r-r6=2.5.0=r36hc72bb7e_0
- r-rcolorbrewer=1.1_2=r36h6115d3f_1003
- r-rcpp=1.0.6=r36h03ef668_0
- r-rcpparmadillo=0.9.850.1.0=r36h0357c0b_0
- r-reshape=0.8.8=r36hcdcec82_2
- r-reshape2=1.4.4=r36h0357c0b_1
- r-rlang=0.4.11=r36hcfec24a_0
- r-scales=1.1.1=r36h6115d3f_0
- r-stringi=1.4.3=r36h0357c0b_2
- r-stringr=1.4.0=r36h6115d3f_2
- r-susier=0.11.33=r36hc72bb7e_0
- r-tibble=3.1.2=r36hcfec24a_0
- r-utf8=1.2.1=r36hcfec24a_0
- r-vctrs=0.3.8=r36hcfec24a_1
- r-viridislite=0.4.0=r36hc72bb7e_0
- r-withr=2.4.2=r36hc72bb7e_0
- r-xgboost=1.4.0=r36h9c3ff4c_0
- re2=2021.04.01=h9c3ff4c_0
- readline=8.1.2=h7f8727e_1
- requests=2.26.0=pyhd3eb1b0_0
- rhash=1.4.1=h3c74f83_1
- s2n=1.0.10=h9b69904_0
- samtools=1.6=hb116620_7
- scikit-learn=0.24.2=py36ha9443f7_0
- scipy=1.1.0=py36hfa4b5c9_1
- seqtk=1.3=h5bf99c6_3
- setuptools=58.0.4=py36h06a4308_0
- shapeit4=4.1.3=h3ac2748_0
- sip=4.19.8=py36hf484d3e_0
- six=1.16.0=pyhd3eb1b0_1
- snappy=1.1.9=hbd366e4_1
- sqlite=3.38.5=hc218d9a_0
- threadpoolctl=3.1.0=pyh8a188c0_0
- tk=8.6.12=h1ccaba5_0
- tktable=2.10=h14c3975_0
- tornado=6.1=py36h27cfd23_0
- typing_extensions=4.1.1=pyh06a4308_0
- ucsc-liftover=357=0
- urllib3=1.26.8=pyhd3eb1b0_0
- vcf2genome=0.91=hdfd78af_2
- vcflib=1.0.0_rc2=h56106d0_2
- websocket-client=0.54.0=py36_1000
- wheel=0.37.1=pyhd3eb1b0_0
- x264=1!157.20191217=h7b6447c_0
- xz=5.2.5=h7f8727e_1
- zipp=3.6.0=pyhd3eb1b0_0
- zlib=1.2.12=h7f8727e_2
- zstd=1.4.9=haebb681_0
- pip:
- bx-python==0.8.12
- crossmap==0.6.3
- cython==0.29.30
- pybigwig==0.3.18
- pysam==0.19.1
prefix: /dssg/home/acct-bioxsyy/bioxsyy-user2/.conda/envs/flat