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DESCRIPTION
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DESCRIPTION
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Package: trendsceek
Title: Identify Genes with Spatial Expression Trends in Single-Cell Gene Expression Data
Version: 1.0.0
Authors@R: c(person("Daniel", "Edsgärd", email = '[email protected]', role = c("aut", "cre")))
Description: Identify genes with spatial expression trends in single-cell gene expression data using marked point processes.
URL: https://github.com/edsgard/trendsceek
BugReports: https://github.com/edsgard/trendsceek/issues
Depends: R (>= 3.3.1)
License: GPL-3
Encoding: UTF-8
LazyData: true
Imports:
BiocParallel,
genefilter,
statmod,
MASS,
matrixStats,
reshape2,
ggplot2,
dplyr,
tidyr,
grid,
tsne,
RColorBrewer,
KernSmooth,
spatstat,
sm,
tibble,
DESeq2,
data.table
Suggests:
testthat,
knitr,
rmarkdown
VignetteBuilder: knitr
RoxygenNote: 5.0.1