We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
genotypes can just be bags of alleles.
genotype has_part -> allele
nodes and edges can be added through VFB_neo4j uk.ac.ebi.vfb.neo4j.KB_tools
use feature_tools to add alleles:
https://github.com/VirtualFlyBrain/VFB_neo4j/blob/master/src/uk/ac/ebi/vfb/neo4j/flybase2neo/feature_tools.py - deals with typing.
VFB_neo4j uk.ac.ebi.vfb.neo4j.KB_tools edge writer to wire these up to genotype node via has_part. Add genotype
We already have a genotype node from GENO MATCH (n:Class { label: 'genotype'}) return n
MATCH (n:Class { label: 'genotype'}) return n
We already have a has_genotype property:
MATCH (n:Property { label: 'has_genotype'}) return n
(has_genotype could be a simple extension on curation platform).
genotype node ID - recipe alphanumeric ordering of IDs to maker a new ID (as for splits)
The text was updated successfully, but these errors were encountered:
dosumis
admclachlan
No branches or pull requests
genotypes can just be bags of alleles.
genotype has_part -> allele
nodes and edges can be added through VFB_neo4j uk.ac.ebi.vfb.neo4j.KB_tools
use feature_tools to add alleles:
https://github.com/VirtualFlyBrain/VFB_neo4j/blob/master/src/uk/ac/ebi/vfb/neo4j/flybase2neo/feature_tools.py - deals with typing.
VFB_neo4j uk.ac.ebi.vfb.neo4j.KB_tools edge writer to wire these up to genotype node via has_part. Add genotype
We already have a genotype node from GENO
MATCH (n:Class { label: 'genotype'}) return n
We already have a has_genotype property:
MATCH (n:Property { label: 'has_genotype'}) return n
(has_genotype could be a simple extension on curation platform).
genotype node ID - recipe alphanumeric ordering of IDs to maker a new ID (as for splits)
The text was updated successfully, but these errors were encountered: