Still having problem running autosegmentation.

[ana-ich]

Hello, I tried to run autosegmentation on the same recording and I have this error now:
Error using -
Array dimensions must match for binary array op.

Error in flufinder.preprocess.removeDynamicBackground (line 30)
imageArray = imageArray - min(imageArray(:));

Error in flufinder.module.preprocessImages (line 43)
imArray = flufinder.preprocess.removeDynamicBackground(imArray);

Error in flufinder.runAutoSegmentation (line 30)
imArray = flufinder.module.preprocessImages(imArray, params);

Error in imviewer.plugin.RoiManager/runAutoSegmentation (line 537)
foundRois = flufinder.runAutoSegmentation(Y, opts);

Error in roimanager.RoimanagerDashboard/onAutosegmentationOptionsChanged (line 626)
obj.runAutoSegmentation()

Error in roimanager.RoimanagerDashboard>@(varargin)obj.onAutosegmentationOptionsChanged(varargin{:}) (line 386)
callbacks{i} = @obj.onAutosegmentationOptionsChanged;

Error in structeditor.App/editCallback_propertyValueChange (line 2283)
obj.Callback{obj.currentPanel}(name, newVal)

Error in structeditor.App>@(varargin)obj.editCallback_propertyValueChange(varargin{:}) (line 1785)
inputbox.Callback = @obj.editCallback_propertyValueChange;

Related documentation

Error while evaluating UIControl Callback.

I also tried to run autosegmentation from the main menu ( not from the black GUI) and it works. The problem is that when I then want to add a few ROIs and save using the GUI(extract signal) the file contains only the ROIs that the autosegmentation found (no new ones). Also is not ideal as data is parsed differently, so I have to change my whole code just for this video.
I'm trying now to draw them by hand in the GUI and let you know. Thank you so much for the support!

[ehennestad]

Could we set up a zoom meeting to discuss some of these issues? Do you have my email?

[ana-ich]

Hi, yes! I will write you!

[ana-ich]

Thanks!

[ehennestad]

Have not received anything, did you try to follow up?