From fe2efd48f9f05e02f56a435806f027b5adb29baa Mon Sep 17 00:00:00 2001
From: Adrienne Stilp <amstilp@uw.edu>
Date: Fri, 26 Apr 2024 15:21:13 -0700
Subject: [PATCH] Remove the workspace column from the table

We separated it into workspace namespace and name, so we don't
need the combined string anymore.
---
 write_primed_phenotype_inventory_table.R | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/write_primed_phenotype_inventory_table.R b/write_primed_phenotype_inventory_table.R
index a018837..0bda8b1 100644
--- a/write_primed_phenotype_inventory_table.R
+++ b/write_primed_phenotype_inventory_table.R
@@ -71,6 +71,8 @@ output_table_name = argv$output_table_name
 
 id_column_name = quo_name(paste0(output_table_name, "_id"))
 results <- results %>%
+  # We separated workspace into namespace and name, so we don't need it anymore.
+  select(-workspace) %>%
   select(
     # Set the id column appropriately, using the output table name.
     !!id_column_name := phenotype_harmonized_id,
@@ -81,7 +83,7 @@ results <- results %>%
     n_rows,
     n_subjects,
     file_path,
-    everything()
+    everything(),
   )
 
 # Delete the table before writing the new data, if it already exists.