demo.genesis_GWAS.single.json

{
  "genesis_gwas_wf.this_outcome_name": "t2d",
  "genesis_gwas_wf.this_outcome_type": "Dichotomous",
  "genesis_gwas_wf.this_test_type": "Single",
  "genesis_gwas_wf.these_genotype_files": ["inputs/1KG_phase3_subset.gds"],
  "genesis_gwas_wf.this_test_stat": "Score",
  "genesis_gwas_wf.this_results_file": "1KG_phase3_subset",
  "genesis_gwas_wf.this_pheno_file": "inputs/1KG_phase3_subset.phenotypes.csv",
  "genesis_gwas_wf.this_covariates_string": "ancestry,sex,last_exam_age,bmi",
  "genesis_gwas_wf.this_min_mac": 5,
  "genesis_gwas_wf.this_kinship_matrix": "inputs/1KG_phase3_subset.grm.RData",
  "genesis_gwas_wf.this_pheno_id": "sample_id"
}