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mkdocs.yml
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site_name: To awk or not
repo_url: https://github.com/UPPMAX/to-awk-or-not
nav:
- Home: index.md
- 1.Simple examples: 1.Simple_example.md
- 2.Teasing with grep: 2.Teasing_with_grep.md
- 3.Shell we awk: 3.Shell_we_awk.md
- 4.Brief commands: 4.Brief_commands.md
- " a) Multiple files": multiple_files.md
- " b) Awk arrays": arrays.md
- 5.String manipulation: 5.String_manipulation.md
- 6.One line programs: 6.One_line_programs.md
- Python vs. awk: Python_vs_awk.md
- Exercises:
- Warming up: Exercises/Exercises.md
- 01.Simple arithmetic *: Exercises/01.Simple_arithmetic.md
- 02.Data extraction *: Exercises/02.Data_extraction.md
- 03.Data extraction **: Exercises/03.Data_extraction.md
- 04.Data manipulation **: Exercises/04.Data_manipulation.md
- 05.Easy tricks *: Exercises/05.Easy_tricks.md
- 06.Bioinformaticians corner *: Exercises/06.Bioinformaticians_corner.md
- Advanced data analysis ****: Exercises/Advanced_data_analysis.md
- Carpool ***: Exercises/Carpool.md
- Difficult to extract data ****: Exercises/Difficult_data.md
- Mail merge ****: Exercises/mail-merge.md
- Scrubbing a web page **: Exercises/Scrubbing.md
- String manipulation **: Exercises/String_manipulation.md
- Awk and json **: Exercises/awk-json.md
- Simple linear regresion ***: Exercises/Linear_regression.md
- "= Case Studies =": Case_studies/List.md
- More with awk:
- User defined functions: More_awk/User_defined_functions.md
- Parameters on the command line : More_awk/Command_params.md
- Input/Output to external program: More_awk/Input_output.md
- Running averages: More_awk/Running_average.md
- Fixed size fields: Other/Fixed_size_fields.md
- Backreferences: Other/Backreferences.md
- Multi-Line records: https://www.gnu.org/software/gawk/manual/html_node/Multiple-Line.html
- Awk or Bash: awk_bash.md
- Localization problems: Other/Localization.md
- Awk vs. nawk vs. gawk: http://www.thegeekstuff.com/2011/06/awk-nawk-gawk/
- GitHub & Binder: Other/Binder.md
- Handy to have: handy.md
- tinyutils: tinyutils.md
- Links: Links.md
- About: About.md
theme:
palette:
# Light mode
- media: "(prefers-color-scheme: light)"
scheme: default
primary: indigo
accent: indigo
toggle:
icon: material/toggle-switch-off-outline
name: Switch to dark mode
# Dark mode
- media: "(prefers-color-scheme: dark)"
scheme: slate
primary: blue
accent: blue
toggle:
icon: material/toggle-switch
name: Switch to light mode
name: material
custom_dir: overrides
features:
- search.highlight
- content.code.annotate
- content.code.copy
#plugins:
# - search:
markdown_extensions:
- admonition
- pymdownx.details
- pymdownx.superfences
- pymdownx.inlinehilite
- pymdownx.keys
- pymdownx.snippets
- pymdownx.tabbed
- pymdownx.smartsymbols
- footnotes
- attr_list
- def_list
- meta
- pymdownx.caret
- pymdownx.mark
- pymdownx.tilde
- pymdownx.highlight:
use_pygments: true
- pymdownx.tasklist:
custom_checkbox: true
- pymdownx.arithmatex:
generic: true
- pymdownx.emoji:
emoji_index: !!python/name:material.extensions.emoji.twemoji
emoji_generator: !!python/name:material.extensions.emoji.to_svg
extra_javascript:
- javascripts/config.js
- https://polyfill.io/v3/polyfill.min.js?features=es6
- https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js
site_url: https://UPPMAX.github.io/to-awk-or-not/
#theme: readthedocs