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Ideas for experiments that can only be done in the faster boolean framework. #46

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Treblesteph opened this issue Feb 5, 2015 · 2 comments
Open

Ideas for experiments that can only be done in the faster boolean framework. #46

Treblesteph opened this issue Feb 5, 2015 · 2 comments
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@Treblesteph
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  • coupled clocks between cells in plant (i.e. roots responding to light without sensing directly)
    • spatial model
    • coupling factor between adjacent cells
  • jet lag experiments
    • fitness dependant on recovery time
    • phase shifting
@Treblesteph Treblesteph self-assigned this Feb 5, 2015
@Treblesteph
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Temperature compensation experiment:

  • additional environmental input (temperature)
  • affecting lags
  • would also affect degradation rate maybe..
  • will speak to Mirela who has previously modelled temperature compensation in the clock

@Treblesteph
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Something based on the complexity of the modelling system rather than the biological questions. For example different logical gate rules (with combinations of and/or for incoming interactions) or for different levels of individual genes etc.

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