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Human_DKD_Visium

Histopathological-based analysis of human kidney spatial transcriptomics data: toward precision pathology

Contributor:

GEO Access: GSE261545

This repo includes the R, Julia, and Python scripts we wrote for the main and supplemental figures.

For each figure, it usually contains two parts:

  • Seurat analysis in R / Scanpy analysis in Python
  • CellScopes visualization in Julia

Please find more information about CellScopes here: https://github.com/HaojiaWu/CellScopes.jl