Remove requirement #703
Workflow file for this run
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| name: Integration testing | |
| on: push | |
| jobs: | |
| build: | |
| name: Build Docker image | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| name: Checkout source tree | |
| - uses: nick-invision/retry@v1 | |
| name: Build docker image | |
| with: | |
| timeout_minutes: 10 | |
| max_attempts: 3 | |
| command: docker build . --file docker/Dockerfile --tag synbiohub/synbiohub:snapshot-standalone | |
| - name: Package image | |
| run: | | |
| docker save synbiohub/synbiohub:snapshot-standalone | gzip > sbh.tar.gz | |
| - uses: actions/upload-artifact@v4 | |
| name: Upload Docker image | |
| with: | |
| name: sbh-image | |
| path: sbh.tar.gz | |
| sboltests: | |
| name: SBOL Test Suite | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| name: Checkout source tree | |
| - uses: actions/download-artifact@v4 | |
| name: Download Docker image | |
| with: | |
| name: sbh-image | |
| - name: Import saved Docker image | |
| run: | | |
| cat sbh.tar.gz | docker load | |
| - uses: actions/setup-python@v4 | |
| name: Install Python | |
| with: | |
| python-version: '3.9' # To match the one in Travis | |
| - name: Install test dependencies | |
| run: | | |
| pip install -r tests/test_requirements.txt | |
| - uses: nick-invision/retry@v1 | |
| name: Run test suite | |
| with: | |
| timeout_minutes: 10 | |
| max_attempts: 3 | |
| command: tests/sbolsuite.sh | |
| sbhtests: | |
| name: SynBioHub Test Suite | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| name: Checkout source tree | |
| - uses: actions/download-artifact@v4 | |
| name: Download Docker image | |
| with: | |
| name: sbh-image | |
| - name: Import saved Docker image | |
| run: | | |
| cat sbh.tar.gz | docker load | |
| - uses: actions/setup-python@v4 | |
| name: Install Python | |
| with: | |
| python-version: '3.9' # To match the one in Travis | |
| - name: Install test dependencies | |
| run: | | |
| pip install -r tests/test_requirements.txt | |
| - name: Run tests | |
| run: | | |
| tests/test.sh --stopaftertestsuite | |
| publish: | |
| name: Publish snapshot image | |
| needs: [sboltests, sbhtests] | |
| runs-on: ubuntu-latest | |
| if: endsWith(github.ref, 'master') | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| name: Download Docker iamge | |
| with: | |
| name: sbh-image | |
| - name: Import saved Docker image | |
| run: | | |
| cat sbh.tar.gz | docker load | |
| - uses: azure/docker-login@v1 | |
| name: Log into Docker Hub | |
| with: | |
| username: ${{ secrets.DOCKER_USERNAME }} | |
| password: ${{ secrets.DOCKER_PASSWORD }} | |
| - name: Push the image to Docker Hub | |
| run: | | |
| docker push synbiohub/synbiohub:snapshot-standalone |