GUI implementation for the msqrob2 package for differentially expression analysis in mass spectrometry using the Features infrastructure
The [
msqrob2](https://www.bioconductor.org/packages/release/bioc/html/msqrob2.html) Bioconductor package ports and modernises the method presented in [
MSqRob](https://github.com/statOmics/MSqRob) and [
MSqRobSum](https://github.com/statOmics/MSqRobSum) to use the [
QFeatures`](https://www.bioconductor.org/packages/release/bioc/html/QFeatures.html)
class infrastructure.
The msqrob2gui
package implements shiny apps for Bioconductor package msqrob2
.
if(!requireNamespace("BiocManager", quietly = TRUE)) {
install.packages("BiocManager")
}
BiocManager::install("msqrob2")
BiocManager::install("statomics/msqrob2gui")
The app can be launched by loading the package and running the launchMsqrob2App
function
library(msqrob2gui)
launchMsqrob2App()
An instruction video can be found on https://youtu.be/F5d0E-U4rOM