diff --git a/omicverse_guide/docs/Installation_guild.md b/omicverse_guide/docs/Installation_guild.md index 71be36a5..b4497ca5 100644 --- a/omicverse_guide/docs/Installation_guild.md +++ b/omicverse_guide/docs/Installation_guild.md @@ -114,6 +114,21 @@ pip install -U omicverse conda install pytorch::pytorch torchvision torchaudio -c pytorch ``` +## Jupyter-lab + +For the best interactive analysis experience, we highly recommend installing jupyter-lab so that you can interactively edit the code and get the analysis results and visualizations right away. + +```shell +pip install jupyter-lab +``` + +After you have finished the installation, in your terminal (note that you must be in the omicverse environment, not the base environment), type `jupyter-lab`, a URL will appear, we can open this URL in the browser to start our analysis journey! + +![jupyter](img/jupyter.jpg) + +![jupyter-light](img/light_jupyter.jpg#gh-light-mode-only) +![jupyter-dark](img/dark_jupyter.jpg#gh-dark-mode-only) + ## Development For development - clone this repo and run: diff --git a/omicverse_guide/docs/img/dark_jupyter.jpg b/omicverse_guide/docs/img/dark_jupyter.jpg new file mode 100644 index 00000000..f748cac3 Binary files /dev/null and b/omicverse_guide/docs/img/dark_jupyter.jpg differ diff --git a/omicverse_guide/docs/img/jupyter.jpg b/omicverse_guide/docs/img/jupyter.jpg new file mode 100644 index 00000000..d33b043a Binary files /dev/null and b/omicverse_guide/docs/img/jupyter.jpg differ diff --git a/omicverse_guide/docs/img/light_jupyter.jpg b/omicverse_guide/docs/img/light_jupyter.jpg new file mode 100644 index 00000000..61a1fae0 Binary files /dev/null and b/omicverse_guide/docs/img/light_jupyter.jpg differ