From 98ac22b604a85ca219bec675267664b2dacb420d Mon Sep 17 00:00:00 2001 From: "Documenter.jl" Date: Fri, 8 Nov 2024 08:57:04 +0000 Subject: [PATCH] build based on 538af2e --- dev/.documenter-siteinfo.json | 2 +- dev/assets/Manifest.toml | 70 +++++++++++++++++------------------ dev/index.html | 36 +++++++++--------- dev/tutorial/index.html | 2 +- 4 files changed, 55 insertions(+), 55 deletions(-) diff --git a/dev/.documenter-siteinfo.json b/dev/.documenter-siteinfo.json index b3e5fa8..90e0b33 100644 --- a/dev/.documenter-siteinfo.json +++ b/dev/.documenter-siteinfo.json @@ -1 +1 @@ -{"documenter":{"julia_version":"1.11.1","generation_timestamp":"2024-11-01T08:56:38","documenter_version":"1.7.0"}} \ No newline at end of file +{"documenter":{"julia_version":"1.11.1","generation_timestamp":"2024-11-08T08:56:58","documenter_version":"1.7.0"}} \ No newline at end of file diff --git a/dev/assets/Manifest.toml b/dev/assets/Manifest.toml index 6e85c98..e0094f2 100644 --- a/dev/assets/Manifest.toml +++ b/dev/assets/Manifest.toml @@ -51,9 +51,9 @@ version = "0.1.38" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "d80af0733c99ea80575f612813fa6aa71022d33a" +git-tree-sha1 = "50c3c56a52972d78e8be9fd135bfb91c9574c140" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "4.1.0" +version = "4.1.1" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -107,9 +107,9 @@ version = "7.16.0" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "0dd7edaff278e346eb0ca07a7e75c9438408a3ce" +git-tree-sha1 = "492681bc44fac86804706ddb37da10880a2bd528" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.10.3" +version = "1.10.4" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -356,9 +356,9 @@ version = "1.15.1" [[deps.DifferentiationInterface]] deps = ["ADTypes", "LinearAlgebra"] -git-tree-sha1 = "16611777adf4a818f18c33210895947814180964" +git-tree-sha1 = "95cf94719d2f71ad8b8c7ba3eb0accc978626856" uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63" -version = "0.6.16" +version = "0.6.18" [deps.DifferentiationInterface.extensions] DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore" @@ -398,9 +398,9 @@ version = "0.6.16" [[deps.DispatchDoctor]] deps = ["MacroTools", "Preferences"] -git-tree-sha1 = "810cae95ca4db1c563be2d7d38fa9b7289d302db" +git-tree-sha1 = "453df2ce2aef7de59c69a56d31dcd2ec3384dd77" uuid = "8d63f2c5-f18a-4cf2-ba9d-b3f60fc568c8" -version = "0.4.16" +version = "0.4.17" weakdeps = ["ChainRulesCore", "EnzymeCore"] [deps.DispatchDoctor.extensions] @@ -487,9 +487,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -git-tree-sha1 = "9c3a42611e525352e9ad5e4134ddca5c692ff209" +git-tree-sha1 = "04c777af6ef65530a96ab68f0a81a4608113aa1d" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.8.4" +version = "0.8.5" weakdeps = ["Adapt"] [deps.EnzymeCore.extensions] @@ -581,9 +581,9 @@ version = "1.3.7" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] -git-tree-sha1 = "cf0fe81336da9fb90944683b8c41984b08793dad" +git-tree-sha1 = "a9ce73d3c827adab2d70bf168aaece8cce196898" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.36" +version = "0.10.37" weakdeps = ["StaticArrays"] [deps.ForwardDiff.extensions] @@ -748,9 +748,9 @@ version = "0.6.0" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "71dd823bf0a5aaa8264e1143b96a0baa631f4ce0" +git-tree-sha1 = "4f20a2df85a9e5d55c9e84634bbf808ed038cabd" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.7" +version = "0.9.8" [[deps.LaTeXStrings]] git-tree-sha1 = "dda21b8cbd6a6c40d9d02a73230f9d70fed6918c" @@ -838,9 +838,9 @@ version = "1.11.0" [[deps.Libiconv_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "f9557a255370125b405568f9767d6d195822a175" +git-tree-sha1 = "61dfdba58e585066d8bce214c5a51eaa0539f269" uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531" -version = "1.17.0+0" +version = "1.17.0+1" [[deps.LineSearch]] deps = ["ADTypes", "CommonSolve", "ConcreteStructs", "FastClosures", "LinearAlgebra", "MaybeInplace", "SciMLBase", "SciMLJacobianOperators", "StaticArraysCore"] @@ -865,9 +865,9 @@ version = "1.11.0" [[deps.LinearSolve]] deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "ddb60aabc5efb0670c7ddde5fedf7ab44520a3e6" +git-tree-sha1 = "591de175461afd8323aa24b7686062574527aa3a" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.36.1" +version = "2.36.2" [deps.LinearSolve.extensions] LinearSolveBandedMatricesExt = "BandedMatrices" @@ -1002,9 +1002,9 @@ version = "1.11.0" [[deps.ModelingToolkit]] deps = ["AbstractTrees", "ArrayInterface", "BlockArrays", "Combinatorics", "CommonSolve", "Compat", "ConstructionBase", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "DiffRules", "Distributed", "Distributions", "DocStringExtensions", "DomainSets", "DynamicQuantities", "ExprTools", "Expronicon", "FindFirstFunctions", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "Graphs", "InteractiveUtils", "JuliaFormatter", "JumpProcesses", "Latexify", "Libdl", "LinearAlgebra", "MLStyle", "NaNMath", "NonlinearSolve", "OffsetArrays", "OrderedCollections", "PrecompileTools", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "SciMLStructures", "Serialization", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils", "Symbolics", "URIs", "UnPack", "Unitful"] -git-tree-sha1 = "154c6d719b221a4f9f95eaec2720f42678970847" +git-tree-sha1 = "db309b354ade7fe3deb97d95ca241ed8f1096e91" uuid = "961ee093-0014-501f-94e3-6117800e7a78" -version = "9.47.0" +version = "9.49.0" [deps.ModelingToolkit.extensions] MTKBifurcationKitExt = "BifurcationKit" @@ -1277,9 +1277,9 @@ version = "1.3.4" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "b034171b93aebc81b3e1890a036d13a9c4a9e3e0" +git-tree-sha1 = "ed2514425d030d7c9054fa0f2275ada45681788d" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.27.0" +version = "3.27.2" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" @@ -1365,9 +1365,9 @@ version = "0.6.43" [[deps.SciMLBase]] deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] -git-tree-sha1 = "26fea1911818cd480400f1a2b7f6b32c3cc3836a" +git-tree-sha1 = "7a54136472ca0cb0f66ef22aa3f0ff198f379fa7" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.56.4" +version = "2.58.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -1389,10 +1389,10 @@ version = "2.56.4" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.SciMLJacobianOperators]] -deps = ["ADTypes", "ConcreteStructs", "ConstructionBase", "DifferentiationInterface", "FastClosures", "LinearAlgebra", "SciMLBase", "SciMLOperators"] -git-tree-sha1 = "991d2a8900e687e2c693d587daa739c8fda01366" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "ConstructionBase", "DifferentiationInterface", "FastClosures", "LinearAlgebra", "SciMLBase", "SciMLOperators"] +git-tree-sha1 = "f66048bb969e67bd7d1bdd03cd0b81219642bbd0" uuid = "19f34311-ddf3-4b8b-af20-060888a46c0e" -version = "0.1.0" +version = "0.1.1" [[deps.SciMLOperators]] deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"] @@ -1600,9 +1600,9 @@ version = "7.7.0+0" [[deps.SymbolicIndexingInterface]] deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] -git-tree-sha1 = "4bc96df5d71515b1cb86dd626915f06f4c0d46f5" +git-tree-sha1 = "20cf607cafb31f922bce84d60379203e7a126911" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.33" +version = "0.3.34" [[deps.SymbolicLimits]] deps = ["SymbolicUtils"] @@ -1626,9 +1626,9 @@ version = "3.7.2" [[deps.Symbolics]] deps = ["ADTypes", "ArrayInterface", "Bijections", "CommonWorldInvalidations", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "IfElse", "LaTeXStrings", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "Primes", "RecipesBase", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils", "TermInterface"] -git-tree-sha1 = "5faab20c0ea9414b18094fc7aa473bbd5527a50a" +git-tree-sha1 = "41852067b437d16a3ad4e01705ffc6e22925c42c" uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7" -version = "6.15.4" +version = "6.17.0" [deps.Symbolics.extensions] SymbolicsForwardDiffExt = "ForwardDiff" @@ -1760,15 +1760,15 @@ version = "0.1.6" [[deps.VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"] -git-tree-sha1 = "e7f5b81c65eb858bed630fe006837b935518aca5" +git-tree-sha1 = "4ab62a49f1d8d9548a1c8d1a75e5f55cf196f64e" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.70" +version = "0.21.71" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "1165b0443d0eca63ac1e32b8c0eb69ed2f4f8127" +git-tree-sha1 = "6a451c6f33a176150f315726eba8b92fbfdb9ae7" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.13.3+0" +version = "2.13.4+0" [[deps.Zlib_jll]] deps = ["Libdl"] diff --git a/dev/index.html b/dev/index.html index da71d31..50763b3 100644 --- a/dev/index.html +++ b/dev/index.html @@ -25,11 +25,11 @@ [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.38 - [79e6a3ab] Adapt v4.1.0 + [79e6a3ab] Adapt v4.1.1 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.16.0 - [4c555306] ArrayLayouts v1.10.3 + [4c555306] ArrayLayouts v1.10.4 [e2ed5e7c] Bijections v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.1.1 @@ -59,8 +59,8 @@ [77a26b50] DiffEqNoiseProcess v5.23.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 - [a0c0ee7d] DifferentiationInterface v0.6.16 - [8d63f2c5] DispatchDoctor v0.4.16 + [a0c0ee7d] DifferentiationInterface v0.6.18 + [8d63f2c5] DispatchDoctor v0.4.17 [31c24e10] Distributions v0.25.112 [ffbed154] DocStringExtensions v0.9.3 [e30172f5] Documenter v1.7.0 @@ -68,7 +68,7 @@ [7c1d4256] DynamicPolynomials v0.6.0 [06fc5a27] DynamicQuantities v1.1.0 [4e289a0a] EnumX v1.0.4 - [f151be2c] EnzymeCore v0.8.4 + [f151be2c] EnzymeCore v0.8.5 [e2ba6199] ExprTools v0.1.10 ⌅ [6b7a57c9] Expronicon v0.8.5 [8f5d6c58] EzXML v1.2.0 @@ -79,7 +79,7 @@ [64ca27bc] FindFirstFunctions v1.4.1 [6a86dc24] FiniteDiff v2.26.0 [1fa38f19] Format v1.3.7 - [f6369f11] ForwardDiff v0.10.36 + [f6369f11] ForwardDiff v0.10.37 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.4.12 @@ -102,7 +102,7 @@ [98e50ef6] JuliaFormatter v1.0.62 [ccbc3e58] JumpProcesses v9.14.0 [ef3ab10e] KLU v0.6.0 - [ba0b0d4f] Krylov v0.9.7 + [ba0b0d4f] Krylov v0.9.8 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.5 [10f19ff3] LayoutPointers v0.1.17 @@ -110,7 +110,7 @@ [5078a376] LazyArrays v2.2.1 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.3.0 - [7ed4a6bd] LinearSolve v2.36.1 + [7ed4a6bd] LinearSolve v2.36.2 [2ab3a3ac] LogExpFunctions v0.3.28 [bdcacae8] LoopVectorization v0.12.171 [d8e11817] MLStyle v0.4.17 @@ -121,7 +121,7 @@ [bb5d69b7] MaybeInplace v0.1.4 [c03570c3] Memoize v0.4.4 [e1d29d7a] Missings v1.2.0 - [961ee093] ModelingToolkit v9.47.0 + [961ee093] ModelingToolkit v9.49.0 [46d2c3a1] MuladdMacro v0.2.4 [102ac46a] MultivariatePolynomials v0.5.7 [d8a4904e] MutableArithmetics v1.5.2 @@ -148,7 +148,7 @@ [74087812] Random123 v1.7.0 [e6cf234a] RandomNumbers v1.6.0 [3cdcf5f2] RecipesBase v1.3.4 - [731186ca] RecursiveArrayTools v3.27.0 + [731186ca] RecursiveArrayTools v3.27.2 [f2c3362d] RecursiveFactorization v0.2.23 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 @@ -158,8 +158,8 @@ [7e49a35a] RuntimeGeneratedFunctions v0.5.13 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 - [0bca4576] SciMLBase v2.56.4 - [19f34311] SciMLJacobianOperators v0.1.0 + [0bca4576] SciMLBase v2.58.0 + [19f34311] SciMLJacobianOperators v0.1.1 [c0aeaf25] SciMLOperators v0.3.11 [53ae85a6] SciMLStructures v1.5.0 [efcf1570] Setfield v1.1.1 @@ -179,10 +179,10 @@ [2913bbd2] StatsBase v0.34.3 [4c63d2b9] StatsFuns v1.3.2 [7792a7ef] StrideArraysCore v0.5.7 - [2efcf032] SymbolicIndexingInterface v0.3.33 + [2efcf032] SymbolicIndexingInterface v0.3.34 [19f23fe9] SymbolicLimits v0.2.2 [d1185830] SymbolicUtils v3.7.2 - [0c5d862f] Symbolics v6.15.4 + [0c5d862f] Symbolics v6.17.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [8ea1fca8] TermInterface v2.0.0 @@ -198,16 +198,16 @@ [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.21.0 [a7c27f48] Unityper v0.1.6 - [3d5dd08c] VectorizationBase v0.21.70 + [3d5dd08c] VectorizationBase v0.21.71 [2e619515] Expat_jll v2.6.2+0 [f8c6e375] Git_jll v2.46.2+0 [1d5cc7b8] IntelOpenMP_jll v2024.2.1+0 - [94ce4f54] Libiconv_jll v1.17.0+0 + [94ce4f54] Libiconv_jll v1.17.0+1 [856f044c] MKL_jll v2024.2.0+0 [458c3c95] OpenSSL_jll v3.0.15+1 [efe28fd5] OpenSpecFun_jll v0.5.5+0 [f50d1b31] Rmath_jll v0.5.1+0 - [02c8fc9c] XML2_jll v2.13.3+0 + [02c8fc9c] XML2_jll v2.13.4+0 [1317d2d5] oneTBB_jll v2021.12.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 @@ -257,4 +257,4 @@ [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 -Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

You can also download the manifest file and the project file.

+Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

You can also download the manifest file and the project file.

diff --git a/dev/tutorial/index.html b/dev/tutorial/index.html index 17ee37b..30a38d1 100644 --- a/dev/tutorial/index.html +++ b/dev/tutorial/index.html @@ -36,4 +36,4 @@ prob = ODEProblem(ml, tspan; p = p) sol = solve(prob, TRBDF2(), dtmax = 1.0) V = map(x -> x[1], sol.u) -plot(sol.t, V)

ODEProblem also accepts a u0 parameter to change the initial conditions (remember u0 = list_initial_conditions(ml)).

+plot(sol.t, V)

ODEProblem also accepts a u0 parameter to change the initial conditions (remember u0 = list_initial_conditions(ml)).