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CHANGELOG.md

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CHANGELOG

0.2.23 - 2023-1-23

  • [vtcmd] updated logic to allow alt-endpoints to contain sub-folders
  • [downloadcmd] Added validation for -dp arg

0.2.21 - 2022-11-04

  • [vtcmd] fixed regression affecting the -rs functionality
  • [nda-tools] Added additional logging for network requests

0.2.20 - 2022-11-04

  • [downloadcmd] removed obsolete -r flag
  • [downloadcmd] updated logic to request pre-signed urls in batches of 50 at a time
  • [downloadcmd] updated logic to allow the program to pick up where it left off after an unexpected termination by parsing download-logs
  • [vtcmd] added --validation-timeout parameter to allow timeouts >5min for validation (useful for large csv's)

0.2.19 - 2022-09-16

  • [vtcmd] added -rs feature to allow users to fix QA errors.

0.2.18 - 2022-08-10

  • [nda-tools] Removed password from settings.cfg and --password / -p flags.
  • [nda-tools] Added keyring module for securely password storage and retrieval.
  • [vtcmd] Fixed bug where 'Bad Credentials' error was displayed when trying to validate submissions containing manifest elements.

0.2.17 - 2022-06-23

  • [nda-tools] Updated logging mechanism from print statements to using the logging module.
  • [nda-tools] fixed bug with resuming submission where the -wt flag was not having the intended effect.
  • [nda-tools] removed obsolete DataManager classes and related logic.

0.2.5 - 2021-06-03

  • [nda-tools] Replaced calls to legacy Download Manager with calls to new package service.

0.2.4 - 2021-03-22

  • [nda-tools] Update password hashing to authenticate with NDA webservice endpoints.

0.2.0 - 2020-04-07

  • [vtcmd] Fixed bug that prevented resuming submissions when incomplete multipart uploads were present in s3 buckets.
  • [vtcmd] Updated code to print current version of tool to console before running.

0.1.21 - 2019-10-30

  • [vtcmd] Added --skipValidation flag to skip checking that local associated files exist on filesystem.
  • [vtcmd] New sections and options are automatically added to user settings.cfg.
  • [nda-tools] Fixed bugs preventing use of full file paths on all operating systems.
  • [nda-tools] Replaced use of aws_access_key and aws_secret_key with iam_user_credentials and data_manager_credentials, which defaults to use of FederationUser Token to submit from S3 objects if no credentials are supplied in settings.cfg.
  • [nda-tools] Added unit tests for Utils.py for parse relative/full filepaths and automatically sanitizing paths based on path patterns.

0.1.20 - 2019-07-15

  • [nda-tools] Python2 compatibility fixes and some PEP-8 style changes; fixes GitHub Issue 9
  • [nda-tools] Addressed issue where configuration file cannot be located on fresh installations.

0.1.19 - 2019-07-02

  • [vtcmd] Fixed issue with writing debug log files to directory before it is created; fixes GitHub Issue 12
  • [vtcmd] Removed write mode when opening associated files for upload to S3.
  • [vtcmd] Update to only fetch multi-part credentials once during resume option in check_submitted_files().
  • [downloadcmd] Add message regarding transfer limit to download(5TB).
  • [downloadcmd] Update to use alias when creating local file path to download.
  • [nda-tools] Update to check version of the client and service.
  • [nda-tools] Add CHANGELOG.md.

0.1.18 - 2019-05-15

  • [vtcmd] Update to catch expired token errors and get new credentials so long-running file uploads can complete successfully.
  • [vtcmd] Update status to "In Progress" in Python client so that this indicates that uploading of files was initiated until it's completed.
  • [nda-tools] Add debug logging to service calls for the responses/exceptions caught when communicating with services so that improves debugging and issues resolution.

0.1.17 - 2019-04-05

  • [vtcmd] Decreased batch size for fetching multi-part credentials and updating submission status.

0.1.16 - 2019-03-27

  • [vtcmd] Update client to check that associated files are readable during associate file step before creating submission package.
  • [vtcmd] Add support for resuming partially uploaded files when resuming a submission so that it will check which parts are already uploaded, and then only finish uploading the incomplete parts.
  • [vtcmd] Update to set the size for both datafile and manifest associated files before uploading files so that submission metrics accurately reflect the state of a submission.
  • [nda-tools] Updated make_config function so that user can use both versions python 2 and python 3.

0.1.15 - 2018-12-20

  • [vtcmd] Update to handle new message format from services that includes error message details.
  • [vtcmd] Update to use batch operations for getting multipart upload credentials and for updating status of submission files so that submission of large numbers of files will take less time.