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Image persistence with sparse distance matrices #45

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mglisse opened this issue Oct 27, 2023 · 0 comments
Open

Image persistence with sparse distance matrices #45

mglisse opened this issue Oct 27, 2023 · 0 comments

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@mglisse
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mglisse commented Oct 27, 2023

Hello,
we wanted to compute the persistence diagram of the image between 2 filtrations, and the branch https://github.com/Ripser/ripser/tree/image-persistence-simple looked promising. However, it looks like it is based on an old version of Ripser before sparse distance matrices were introduced, and our (very sparse) matrices are too large for a dense representation.
Do you think it is mostly a matter of merging the 2 branches (which may be much more work than git merge but should remain relatively straightforward), or is there something in the image algorithm that is likely to behave badly with sparse distance matrices?

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