-
Notifications
You must be signed in to change notification settings - Fork 3
/
Copy pathreferences.bib
1001 lines (903 loc) · 36.9 KB
/
references.bib
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
@article{togashi2015,
title = {Morphological and moisture availability controls of the leaf area-to-sapwood area ratio: analysis of measurements on {Australian} trees},
volume = {5},
doi = {10.1002/ece3.1344},
language = {en},
number = {6},
urldate = {2015-10-08},
journal = {Ecology and Evolution},
author = {Togashi, Henrique Furstenau and Prentice, Iain Colin and Evans, Bradley John and Forrester, David Ian and Drake, Paul and Feikema, Paul and Brooksbank, Kim and Eamus, Derek and Taylor, Daniel},
year = {2015},
pages = {1263--1270}
}
@article{chave2014,
title = {Improved allometric models to estimate the aboveground biomass of tropical trees},
volume = {20},
issn = {13541013},
url = {http://doi.wiley.com/10.1111/gcb.12629},
doi = {10.1111/gcb.12629},
number = {10},
journal = {Global Change Biology},
author = {Chave, J{\'e}rôme and R{\'e}jou-Méchain, Maxime and B{\'u}rquez, Alberto and Chidumayo, Emmanuel and Colgan, Matthew S. and Delitti, Welington B.C. and Duque, Alvaro and Eid, Tron and Fearnside, Philip M. and Goodman, Rosa C. and Henry, Matieu and Martínez-Yr{\'i}zar, Angelina and Mugasha, Wilson A. and Muller-Landau, Helene C. and Mencuccini, Maurizio and Nelson, Bruce W. and Ngomanda, Alfred and Nogueira, Euler M. and Ortiz-Malavassi, Edgar and P{\'e}lissier, Rapha{\"e}l and Ploton, Pierre and Ryan, Casey M. and Saldarriaga, Juan G. and Vieilledent, Ghislain},
year = {2014},
pages = {3177--3190}
}
@Article{abramowitz2012,
title = {Towards a public, standardized, diagnostic benchmarking system for land surface models},
author = {G. Abramowitz},
journal = {Geoscientific Model Development},
year = {2012},
number = {3},
pages = {819--827},
volume = {5},
doi = {10.5194/gmd-5-819-2012},
}
@Article{aroraboer2005,
title = {A parameterization of leaf phenology for the terrestrial ecosystem component of climate models},
author = {Vivek K. Arora and George J. Boer},
journal = {Global Change Biology},
year = {2005},
number = {1},
pages = {39--59},
volume = {11},
doi = {10.1111/j.1365-2486.2004.00890.x},
}
@Article{barclay2000,
title = {Conversion of total to projected leaf area index in conifers},
author = {H.J. Barclay and D. Goodman},
journal = {Canadian Journal of Botany},
year = {2000},
pages = {447--454},
volume = {78},
}
@Manual{barton2015,
title = {MuMIn: Multi-Model Inference},
author = {Kamil Bartoń},
year = {2015},
note = {R package version 1.15.1},
url = {http://CRAN.R-project.org/package=MuMIn},
}
@Article{berninger1994,
title = {Foliage area - sapwood area relationships of {Scots} pine ({Pinus} sylvestris) trees in different climates},
volume = {24},
journal = {Canadian Journal of Forest Research},
author = {F. Berninger and E. Nikinmaa},
year = {1994},
pages = {2263--2268},
}
@article{berninger1995,
title = {Evaporative demand determines branchiness of {Scots} pine},
volume = {102},
number = {2},
journal = {Oecologia},
author = {Berninger, Frank and Nikinmaa, E. and Hari, P. and Mencuccini, M. and Grace, John},
year = {1995},
pages = {164--168}
}
@Article{bloom2016,
title = {The decadal state of the terrestrial carbon cycle: {Global} retrievals of terrestrial carbon allocation, pools, and residence times},
volume = {113},
url = {http://www.pnas.org/content/113/5/1285},
doi = {10.1073/pnas.1515160113},
number = {5},
journal = {Proceedings of the National Academy of Sciences},
author = {A. Anthony Bloom and Jean-François Exbrayat and Ivar R. van der Velde and Liang Feng and Mathew Williams},
year = {2016},
pages = {1285--1290},
}
@Article{bond1989,
title = {The tortoise and the hare: ecology of angiosperm dominance and gymnosperm persistence},
author = {W. J. Bond},
journal = {Biological Journal of the Linnean Society},
year = {1989},
number = {3},
pages = {227--249},
volume = {36},
doi = {10.1111/j.1095-8312.1989.tb00492.x},
}
@Manual{breheny2015,
title = {visreg: Visualization of Regression Models},
author = {Patrick Breheny and Woodrow Burchett},
year = {2015},
note = {R package version 2.2-0},
url = {http://CRAN.R-project.org/package=visreg},
}
@Article{cairns1997,
title = {Root biomass allocation in the world's upland forests},
author = {Michael A. Cairns and Sandra Brown and Eileen H. Helmer and Greg A. Baumgardner},
journal = {Oecologia},
year = {1997},
pages = {1--11},
volume = {111},
}
@Article{callaway1994,
title = {Biomass Allocation of Montane and Desert {Ponderosa} Pine: an Analog for Response to Climate Change},
author = {Ragan M. Callaway and Evan H. DeLucia and William H. Schlesinger},
journal = {Ecology},
year = {1994},
number = {5},
pages = {1474--1481},
volume = {75},
doi = {10.2307/1937470},
url = {http://www.jstor.org/stable/1937470},
}
@Article{cannelldewar1994,
title = {Carbon allocation in trees: a review of concepts for modelling},
author = {Melvin GR Cannell and R. C. Dewar},
journal = {Advances in ecological research},
year = {1994},
pages = {59--104},
volume = {25},
}
@Article{chabothicks1982,
title = {The ecology of leaf life spans},
author = {Brian F. Chabot and David J. Hicks},
journal = {Annual Review of Ecology and Systematics},
year = {1982},
pages = {229--259},
volume = {13},
url = {http://www.jstor.org/stable/2097068},
}
@Article{chave2005,
title = {Tree allometry and improved estimation of carbon stocks and balance in tropical forests},
author = {J. Chave and C. Andalo and S. Brown and M. A. Cairns and J. Q. Chambers and D. Eamus and H. Foelster and F. Fromard and N. Higuchi and T. Kira and J.-P. Lescure and B. W. Nelson and H. Ogawa and H. Puig and B. Riera and T. Yamakura},
journal = {Oecologia},
year = {2005},
number = {1},
pages = {87--99},
volume = {145},
doi = {10.1007/s00442-005-0100-x},
}
@Article{chave2009,
title = {Towards a worldwide wood economics spectrum},
author = {Jerome Chave and David Coomes and Steven Jansen and Simon L. Lewis and Nathan G. Swenson and Amy E. Zanne},
journal = {Ecology letters},
year = {2009},
number = {4},
pages = {351--366},
volume = {12},
}
@Article{chen1992,
title = {Defining leaf-area index for non-flat leaves.},
author = {J. M. Chen and T. A. Black},
journal = {Plant Cell and Environment},
year = {1992},
pages = {421--429},
volume = {15},
url = {://A1992HV62900005},
}
@Article{chen2013,
title = {Allocation of gross primary production in forest ecosystems: allometric constraints and environmental responses},
author = {Guangshui Chen and Yusheng Yang and David Robinson},
journal = {New Phytologist},
year = {2013},
number = {4},
pages = {1176--1186},
volume = {200},
doi = {10.1111/nph.12426},
}
@Article{cheng2007a,
title = {Above- and Below-ground Biomass Relationships Across 1534~{F}orested Communities},
author = {Dong-Liang Cheng and Karl J. Niklas},
journal = {Annals of Botany},
year = {2007},
number = {1},
pages = {95--102},
volume = {99},
doi = {10.1093/aob/mcl206},
url = {http://aob.oxfordjournals.org/content/99/1/95},
}
@Article{cheng2007b,
title = {Relationships among the Stem, Aboveground and Total Biomass across Chinese Forests},
author = {Dong-Liang Cheng and Gen-Xuan Wang and Tao Li and Qing-Long Tang and Chun-Mei Gong},
journal = {Journal of Integrative Plant Biology},
year = {2007},
number = {11},
pages = {1573--1579},
volume = {49},
doi = {10.1111/j.1774-7909.2007.00576.x},
}
@Article{chevan1991,
title = {Hierarchical Partitioning},
volume = {45},
doi = {10.1080/00031305.1991.10475776},
number = {2},
journal = {The American Statistician},
author = {Albert Chevan and Michael Sutherland},
year = {1991},
pages = {90--96},
}
@Article{dekauwe2014,
title = {Where does the carbon go? {A} model-data intercomparison of vegetation carbon allocation and turnover processes at two temperate forest free-air {CO}$_2$ enrichment sites},
author = {Martin G {De Kauwe} and Belinda E Medlyn and S{\"o}nke Zaehle and Anthony P Walker and Michael C Dietze and Ying-Ping Wang and Yiqi Luo and Atul K Jain and Bassil El-Masri and Thomas Hickler and {others}},
journal = {New Phytologist},
year = {2014},
publisher = {Wiley Online Library},
}
@Article{delucia2000,
title = {Climate-driven changes in biomass allocation in pines},
author = {Evan H. Delucia and Hafiz Maherali and Eileen V. Carey},
journal = {Global Change Biology},
year = {2000},
number = {5},
pages = {587--593},
volume = {6},
doi = {10.1046/j.1365-2486.2000.00338.x},
}
@Article{duursma2007,
title = {Summary models for light interception and light-use efficiency of non-homogeneous canopies},
volume = {27},
url = {://000247167200008},
journal = {Tree Physiology},
author = {R. A. Duursma and A. M\"akel\"a},
year = {2007},
note = {6},
pages = {859--870},
}
@Article{duursma2010,
title = {Self-shading affects allometric scaling in trees},
volume = {24},
url = {://000279837700004},
doi = {10.1111/j.1365-2435.2010.01690.x},
journal = {Functional Ecology},
author = {R. A. Duursma and A. M\"akel\"a and D. E. B. Reid and E. J. Jokela and A. J. Porte and S. D. Roberts},
year = {2010},
note = {4},
pages = {723--730},
}
@Article{enquist2003,
title = {Cope's Rule and the evolution of long-distance transport in vascular plants: allometric scaling, biomass partitioning and optimization},
author = {B. J. Enquist},
journal = {Plant, Cell \& Environment},
year = {2003},
number = {1},
pages = {151--161},
volume = {26},
doi = {10.1046/j.1365-3040.2003.00987.x},
}
@Article{enquist2012,
title = {Land plants: new theoretical directions and empirical prospects},
author = {Brian J. Enquist and Lisa Patrick Bentley},
journal = {Metabolic Ecology: A Scaling Approach. Hoboken, {NJ}: Wiley-Blackwell},
year = {2012},
pages = {164--187},
}
@Article{enquistniklas2002,
title = {Global Allocation Rules for Patterns of Biomass Partitioning in Seed Plants},
author = {Brian J. Enquist and Karl J. Niklas},
journal = {Science},
year = {2002},
number = {5559},
pages = {1517--1520},
volume = {295},
doi = {10.1126/science.1066360},
url = {http://www.sciencemag.org/content/295/5559/1517},
}
@Article{falster2011,
title = {Influence of four major plant traits on average height, leaf-area cover, net primary productivity, and biomass density in single-species forests: a theoretical investigation},
volume = {99},
doi = {10.1111/j.1365-2745.2010.01735.x},
number = {1},
journal = {Journal of Ecology},
author = {D. S. Falster and {\AA} {Br{\"a}nnstr{\"o}m} and U. Dieckmann and M. Westoby},
year = {2011},
pages = {148--164},
}
@Article{falster2015,
title = {{BAAD}: a {Biomass} {And} {Allometry} {Database} for woody plants},
volume = {96},
url = {http://www.esajournals.org/doi/abs/10.1890/14-1889.1},
doi = {10.1890/14-1889.1},
number = {5},
journal = {Ecology},
author = {Daniel S. Falster and Remko A. Duursma and Masae I. Ishihara and Diego R. Barneche and Richard G. FitzJohn and Angelica V{\aa}rhammar and Masahiro Aiba and Makoto Ando and Niels Anten and Michael J. Aspinwall and Jennifer L. Baltzer and Christopher Baraloto and Michael Battaglia and John J. Battles and Ben Bond-Lamberty and Michiel van Breugel and James Camac and Yves Claveau and Llu{\'i}s Coll and Masako Dannoura and Sylvain Delagrange and Jean-Christophe Domec and Farrah Fatemi and Wang Feng and Veronica Gargaglione and Yoshiaki Goto and Akio Hagihara and Jefferson S. Hall and Steve Hamilton and Degi Harja and Tsutom Hiura and Robert Holdaway and Lindsay S. Hutley and Tomoaki Ichie and Eric J. Jokela and Anu Kantola and Jeff W. G. Kelly and Tanaka Kenzo and David King and Brian D. Kloeppel and Takashi Kohyama and Akira Komiyama and Jean-Paul Laclau and Christopher H. Lusk and Douglas A. Maguire and Guerric le Maire and Annikki M{\"a}kel \"a and Lars Markesteijn and John Marshall and Katherine McCulloh and Itsuo Miyata and Karel Mokany and Shigeta Mori and Randall W. Myster and Masahiro Nagano and Shawna L. Naidu and Yann Nouvellon and Anthony P. O'Grady and Kevin L. O'Hara and Toshiyuki Ohtsuka and Noriyuki Osada and Olusegun O. Osunkoya and Pablo Luis Peri and Any Mary Petritan and Lourens Poorter and Angelika Portsmuth and Catherine Potvin and Johannes Ransijn and Douglas Reid and Sabina C. Ribeiro and Scott D. Roberts and Rolando Rodr{\'i}guez and Angela Salda{\~n}a-Acosta and Ignacio Santa-Regina and Kaichiro Sasa and N. Galia Selaya and Stephen C. Sillett and Frank Sterck and Kentaro Takagi and Takeshi Tange and Hiroyuki Tanouchi and David Tissue and Toru Umehara and Hajime Utsugi and Matthew A. Vadeboncoeur and Fernando Valladares and Petteri Vanninen and Jian R. Wang and Elizabeth Wenk and Richard Williams and Fabiano de Aquino Ximenes and Atsushi Yamaba and Toshihiro Yamada and Takuo Yamakura and Ruth D. Yanai and Robert A. York},
year = {2015},
pages = {1445--1445},
}
@Article{falster2016,
title = {plant: a package for modelling forest trait ecology and evolution},
volume = {7},
doi = {10.1111/2041-210X.12525},
number = {2},
journal = {Methods in Ecology and Evolution},
author = {Daniel S. Falster and Richard G. FitzJohn and {\AA}ke {Br{\"a}nnstr{\"o}m} and Ulf Dieckmann and Mark Westoby},
year = {2016},
pages = {136--146},
}
@Manual{fitzjohn2015,
title = {remake: Make-like build management},
author = {Rich FitzJohn},
year = {2015},
note = {R package version 0.2.0},
url = {https://github.com/richfitz/remake},
}
@Article{foley1996,
title = {An integrated biosphere model of land surface processes, terrestrial carbon balance, and vegetation dynamics},
author = {Jonathan A. Foley and I. Colin Prentice and Navin Ramankutty and Samuel Levis and David Pollard and Steven Sitch and Alex Haxeltine},
journal = {Global Biogeochemical Cycles},
year = {1996},
number = {4},
pages = {603--628},
volume = {10},
doi = {10.1029/96GB02692},
}
@Article{franklin2012,
title = {Modeling carbon allocation in trees: a search for principles},
author = {Oskar Franklin and Jacob Johansson and Roderick C. Dewar and Ulf Dieckmann and Ross E. McMurtrie and Ake Br{\"a}nnstr{\"o}m and Ray Dybzinski},
journal = {Tree Physiology},
year = {2012},
number = {6},
pages = {648--666},
volume = {32},
doi = {10.1093/treephys/tpr138},
url = {http://treephys.oxfordjournals.org/content/32/6/648},
}
@Article{friedlingstein1999,
title = {Toward an allocation scheme for global terrestrial carbon models},
author = {P. Friedlingstein and G. Joel and C. B. Field and I. Y. Fung},
journal = {Global Change Biology},
year = {1999},
number = {7},
pages = {755--770},
volume = {5},
doi = {10.1046/j.1365-2486.1999.00269.x},
}
@Article{friedlingsteinetal2014,
title = {Persistent growth of {CO}$_2$ emissions and implications for reaching climate targets},
author = {P. Friedlingstein and R. M. Andrew and J. Rogelj and G. P. Peters and J. G. Canadell and R. Knutti and G. Luderer and M. R. Raupach and M. Schaeffer and D. P. van Vuuren and C. Le Quere},
journal = {Nature Geoscience},
year = {2014},
number = {10},
pages = {709--715},
volume = {7},
doi = {10.1038/ngeo2248},
url = {http://www.nature.com/ngeo/journal/v7/n10/abs/ngeo2248.html},
}
@Article{friend2014,
title = {Carbon residence time dominates uncertainty in terrestrial vegetation responses to future climate and atmospheric {CO}$_2$},
author = {Andrew D. Friend and Wolfgang Lucht and Tim T. Rademacher and Rozenn Keribin and Richard Betts and Patricia Cadule and Philippe Ciais and Douglas B. Clark and Rutger Dankers and Pete D. Falloon and Akihiko Ito and Ron Kahana and Axel Kleidon and Mark R. Lomas and Kazuya Nishina and Sebastian Ostberg and Ryan Pavlick and Philippe Peylin and Sibyll Schaphoff and Nicolas Vuichard and Lila Warszawski and Andy Wiltshire and F. Ian Woodward},
journal = {Proceedings of the National Academy of Sciences},
year = {2014},
number = {9},
pages = {3280--3285},
volume = {111},
doi = {10.1073/pnas.1222477110},
url = {http://www.pnas.org/content/111/9/3280},
}
@Article{givnish2002,
title = {Adaptive significance of evergreen vs. deciduous leaves: solving the triple paradox},
author = {Thomas J. Givnish},
journal = {Silva Fennica},
year = {2002},
number = {3},
pages = {703--743},
volume = {36},
}
@Article{grier1974,
title = {Notes: Conifer Foliage Mass Related to Sapwood Area},
author = {Charles C. Grier and Richard H. Waring},
journal = {Forest Science},
year = {1974},
number = {3},
pages = {205--206},
volume = {20},
}
@Article{harrisonetal2010,
title = {Ecophysiological and bioclimatic foundations for a global plant functional classification},
author = {Sandy P. Harrison and I. Colin Prentice and Doris Barboni and Karen E. Kohfeld and Jian Ni and Jean-Pierre Sutra},
journal = {Journal of Vegetation Science},
year = {2010},
number = {2},
pages = {300--317},
volume = {21},
doi = {10.1111/j.1654-1103.2009.01144.x},
}
@Article{hui2014,
title = {Near Isometric Biomass Partitioning in Forest Ecosystems of {China}},
author = {Dafeng Hui and Jun Wang and Weijun Shen and Xuan Le and Philip Ganter and Hai Ren},
journal = {{PLoS} {ONE}},
year = {2014},
number = {1},
pages = {e86550},
volume = {9},
doi = {10.1371/journal.pone.0086550},
}
@Article{iio2014,
title = {Global dependence of field-observed leaf area index in woody species on climate: a systematic review},
volume = {23},
doi = {10.1111/geb.12133},
number = {3},
journal = {Global Ecology and Biogeography},
author = {Atsuhiro Iio and Kouki Hikosaka and Niels P. R. Anten and Yoshiaki Nakagawa and Akihiko Ito},
year = {2014},
pages = {274--285},
}
@Article{ilomaki2003,
title = {Crown rise due to competition drives biomass allocation in silver birch},
volume = {33},
journal = {Canadian Journal of Forest Research},
author = {S. Ilom\"aki and E. Nikinmaa and A. M\"akel\"a},
year = {2003},
note = {12},
pages = {2395--2404},
}
@Article{ise2010,
title = {Comparison of modeling approaches for carbon partitioning: impact on estimates of global net primary production and equilibrium biomass of woody vegetation from {MODIS GPP}},
author = {Takeshi Ise and Creighton M. Litton and Christian P. Giardina and Akihiko Ito},
journal = {Journal of Geophysical Research: Biogeosciences},
year = {2010},
number = {G4},
volume = {115},
url = {http://www.agu.org/journals/jg/jg1004/2010JG001326/2010jg001326-t01.txt},
}
@Article{jenkins2003,
title = {National-scale biomass estimators for {United States} tree species},
author = {J.C. Jenkins and D.C. Chojnacky and L.S. Heath and R.A. Birdsey},
journal = {Forest Science},
year = {2003},
number = {1},
pages = {12--35},
volume = {49},
}
@Article{klein2015,
title = {Water availability predicts forest canopy height at the global scale},
volume = {18},
doi = {10.1111/ele.12525},
number = {12},
journal = {Ecology Letters},
author = {Tamir Klein and Christophe Randin and Christian K{\"o}rner},
year = {2015},
pages = {1311--1320},
}
@Article{lang1991,
title = {Application of some of {Cauchy}'s theorems to estimation of surface-areas of leaves, needles and branches of plants, and light transmittance},
author = {A. R. G. Lang},
journal = {Agricultural and Forest Meteorology},
year = {1991},
pages = {191--212},
volume = {55},
}
@Article{lathamglobal,
title = {Global Land Cover SHARE ({GLC-SHARE}) database Beta-Release Version 1.0-2014.},
journal = {URL: http://www.glcn.org/databases/lc\_glcshare\_downloads\_en.jsp},
author = {John Latham and Renato Cumani and Ilaria Rosati and Mario Bloise},
year = {2014},
}
@Article{litton2007,
title = {Carbon allocation in forest ecosystems},
author = {C. M. Litton and J. W. Raich and M. G. Ryan},
journal = {Global Change Biology},
year = {2007},
pages = {2089--2109},
volume = {13},
doi = {10.1111/j.1365-2486.2007.01420.x},
url = {://000249991600005},
}
@Article{luo2012,
title = {Root:shoot ratios across {China}'s forests: Forest type and climatic effects},
author = {Yunjian Luo and Xiaoke Wang and Xiaoquan Zhang and Trevor H. Booth and Fei Lu},
journal = {Forest Ecology and Management},
year = {2012},
pages = {19--25},
volume = {269},
doi = {10.1016/j.foreco.2012.01.005},
url = {http://www.sciencedirect.com/science/article/pii/S0378112712000084},
}
@Article{luyssaert2008,
title = {Old-growth forests as global carbon sinks},
author = {Sebastiaan Luyssaert and E.-Detlef Schulze and Annett Boerner and Alexander Knohl and Dominik Hessenmoeller and Beverly E. Law and Philippe Ciais and John Grace},
journal = {Nature},
year = {2008},
number = {7210},
pages = {213--215},
volume = {455},
doi = {10.1038/nature07276},
url = {http://www.nature.com/nature/journal/v455/n7210/full/nature07276.html},
}
@Article{makela2006,
title = {Crown ratio influences allometric scaling in trees},
volume = {87},
journal = {Ecology},
author = {A. M\"akel\"a and H. T. Valentine},
year = {2006},
note = {12},
pages = {2967--2972},
}
@Article{Mccarthy2007,
title = {Consistency between an allometric approach and optimal partitioning theory in global patterns of plant biomass allocation},
author = {M. C. Mccarthy and B. J. Enquist},
journal = {Functional Ecology},
year = {2007},
number = {4},
pages = {713--720},
volume = {21},
doi = {10.1111/j.1365-2435.2007.01276.x},
}
@Article{mccarthyenquist2007,
title = {Consistency between an allometric approach and optimal partitioning theory in global patterns of plant biomass allocation},
author = {M. C. Mccarthy and B. J. Enquist},
journal = {Functional Ecology},
year = {2007},
number = {4},
pages = {713--720},
volume = {21},
doi = {10.1111/j.1365-2435.2007.01276.x},
}
@Article{mccarthyetal2007,
title = {Organ partitioning and distribution across the seed plants: assessing the relative importance of phylogeny and function},
author = {Megan C. McCarthy and Brian J. and {Enquist} and Andrew J. Kerkhoff},
journal = {International Journal of Plant Sciences},
year = {2007},
number = {5},
pages = {751--761},
volume = {168},
doi = {10.1086/509536},
}
@Article{mcconnaughay1999,
title = {Biomass allocation in plants: ontogeny or optimality? {A} test along three resource gradients},
volume = {80},
url = {http://www.esajournals.org/doi/abs/10.1890/0012-9658(1999)080%5B2581:BAIPOO%5D2.0.CO%3B2},
doi = {10.1890/0012-9658(1999)080[2581:BAIPOO]2.0.CO;2},
number = {8},
journal = {Ecology},
author = {K. D. M. McConnaughay and J. S. Coleman},
year = {1999},
pages = {2581--2593},
}
@Article{mcmurtriewolf1983,
title = {Above- and Below-ground Growth of Forest Stands: a Carbon Budget Model},
author = {R. McMurtrie and L. Wolf},
year = {1983},
number = {4},
pages = {437--448},
volume = {52},
date = {1983-10-01},
journal = {Annals of Botany},
langid = {english},
shortjournal = {Ann Bot},
url = {http://aob.oxfordjournals.org/content/52/4/437},
}
@Article{medvigy2009,
title = {Mechanistic scaling of ecosystem function and dynamics in space and time: Ecosystem Demography model version 2},
author = {D. Medvigy and S. C. Wofsy and J. W. Munger and D. Y. Hollinger and P. R. Moorcroft},
journal = {Journal of Geophysical Research: Biogeosciences},
year = {2009},
number = {G1},
pages = {G01002},
volume = {114},
doi = {10.1029/2008JG000812},
}
@Article{mokany2006,
title = {Critical analysis of root:shoot ratios in terrestrial biomes},
author = {Karel Mokany and R. John Raison and Anatoly S. Prokushkin},
journal = {Global Change Biology},
year = {2006},
number = {1},
pages = {84--96},
volume = {12},
doi = {10.1111/j.1365-2486.2005.001043.x},
}
@Article{nakagawa2013,
title = {A general and simple method for obtaining {R}$^2$ from generalized linear mixed-effects models},
author = {Shinichi Nakagawa and Holger Schielzeth},
journal = {Methods in Ecology and Evolution},
year = {2013},
number = {2},
pages = {133--142},
volume = {4},
doi = {10.1111/j.2041-210x.2012.00261.x},
}
@Article{negron2015,
title = {Observed allocations of productivity and biomass, and turnover times in tropical forests are not accurately represented in {CMIP}5 earth system models},
volume = {10},
url = {http://iopscience.iop.org/1748-9326/10/6/064017},
doi = {10.1088/1748-9326/10/6/064017},
number = {6},
journal = {Environmental Research Letters},
author = {Robinson I. Negr{\'o}n-Ju{\'a}rez and Charles D. Koven and William J. Riley and Ryan G. Knox and Jeffrey Q. Chambers},
year = {2015},
pages = {064017},
}
@Book{niklas1994,
title = {Plant allometry: the scaling of form and process},
author = {K. J. Niklas},
publisher = {The University of Chicago Press},
year = {1994},
address = {Chicago},
isbn = {0-226-58081-4},
}
@Article{niklasspatz2004,
title = {Growth and hydraulic (not mechanical) constraints govern the scaling of tree height and mass},
author = {Karl J. Niklas and Hanns-Christof Spatz},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
year = {2004},
number = {44},
pages = {15661--15663},
volume = {101},
doi = {10.1073/pnas.0405857101},
url = {http://www.pnas.org/content/101/44/15661},
}
@Article{oneilldeangelis1981,
title = {Comparative productivity and biomass relations of forest ecosystems},
author = {R. V. O'Neill and D. L. DeAngelis},
journal = {Dynamic properties of forest ecosystems},
year = {1981},
pages = {411--449},
}
@Article{panetal2011,
title = {A Large and Persistent Carbon Sink in the World's Forests},
author = {Yude Pan and Richard A. Birdsey and Jingyun Fang and Richard Houghton and Pekka E. Kauppi and Werner A. Kurz and Oliver L. Phillips and Anatoly Shvidenko and Simon L. Lewis and Josep G. Canadell and Philippe Ciais and Robert B. Jackson and Stephen W. Pacala and A. David McGuire and Shilong Piao and Aapo Rautiainen and Stephen Sitch and Daniel Hayes},
journal = {Science},
year = {2011},
number = {6045},
pages = {988--993},
volume = {333},
doi = {10.1126/science.1201609},
url = {http://www.sciencemag.org/content/333/6045/988},
}
@Article{poorter2000,
title = {The role of biomass allocation in the growth response of plants to different levels of light, {CO}2, nutrients and water: a quantitative review},
author = {Hendrik Poorter and Oscar Nagel},
number = {12},
pages = {1191--1191},
volume = {27},
year = {2000},
journal = {Functional Plant Biology},
shortjournal = {Functional Plant Biol.},
url = {http://www.publish.csiro.au/paper/PP99173_CO},
}
@Article{poorter2006,
title = {Leaf traits are good predictors of plant performance across 53 rain forest species},
volume = {87},
doi = {10.1890/0012-9658(2006)87[1733:LTAGPO]2.0.CO;2},
journal = {Ecology},
author = {L. Poorter and F. Bongers},
year = {2006},
pages = {1733--1743},
}
@Article{poorter2009,
title = {Causes and consequences of variation in leaf mass per area ({LMA}): a meta-analysis},
author = {Hendrik Poorter and {\"U} Niinemets and Lourens Poorter and Ian J. Wright and Rafael Villar},
journal = {New Phytologist},
year = {2009},
number = {3},
pages = {565--588},
volume = {182},
}
@Article{poorter2012,
title = {Biomass allocation to leaves, stems and roots: meta-analyses of interspecific variation and environmental control},
author = {Hendrik Poorter and Karl J. Niklas and Peter B. Reich and Jacek Oleksyn and Pieter Poot and Liesje Mommer},
journal = {New Phytologist},
year = {2012},
number = {1},
pages = {30--50},
volume = {193},
doi = {10.1111/j.1469-8137.2011.03952.x},
}
@Article{poorter2015,
title = {How does biomass distribution change with size and differ among species? {An} analysis for 1200 plant species from five continents},
doi = {10.1111/nph.13571},
journal = {New Phytologist},
author = {Hendrik Poorter and Andrzej M. Jagodzinski and Ricardo Ruiz-Peinado and Shem Kuyah and Yunjian Luo and Jacek Oleksyn and Vladimir A. Usoltsev and Thomas N. Buckley and Peter B. Reich and Lawren Sack},
year = {2015},
pages = {10.1111/nph.13571},
}
@Article{poyatos2007,
title = {Plasticity in hydraulic architecture of {Scots} pine across {Eurasia}},
author = {R. Poyatos and J. Martinez-Vilalta and J. \u{C}erm{\'a}k and R. Ceulemans and A. Granier and J. Irvine and B. K{\"o}stner and F. Lagergren and L. Meiresonne and N. Nadezhdina and R. Zimmermann and P. Llorens and M. Mencuccini},
journal = {Oecologia},
year = {2007},
pages = {245--259},
volume = {153},
doi = {10.1007/s00442-007-0740-0},
}
@Manual{R-2015,
title = {{R}: a language and environment for statistical computing},
author = {{R Core Team}},
organization = {R Foundation for Statistical Computing},
address = {Vienna, Austria},
year = {2015},
url = {http://www.R-project.org/},
}
@Article{reich1992,
title = {Leaf Life-Span in Relation to Leaf, Plant, and Stand Characteristics among Diverse Ecosystems},
volume = {62},
journal = {Ecological Monographs},
author = {P. B. Reich and M. B. Walters and D. S. Ellsworth},
year = {1992},
note = {3},
pages = {365--392},
}
@Article{reich2014,
title = {Temperature drives global patterns in forest biomass distribution in leaves, stems, and roots},
author = {Peter B. Reich and Yunjian Luo and John B. Bradford and Hendrik Poorter and Charles H. Perry and Jacek Oleksyn},
journal = {Proceedings of the National Academy of Sciences},
year = {2014},
number = {38},
pages = {13721--13726},
volume = {111},
doi = {10.1073/pnas.1216053111},
url = {http://www.pnas.org/content/111/38/13721},
}
@Article{ryanlaw2005,
title = {Interpreting, measuring, and modeling soil respiration},
author = {Michael G. Ryan and Beverly E. Law},
journal = {Biogeochemistry},
year = {2005},
number = {1},
pages = {3--27},
volume = {73},
doi = {10.1007/s10533-004-5167-7},
}
@Article{sardans2013,
title = {Tree growth changes with climate and forest type are associated with relative allocation of nutrients, especially phosphorus, to leaves and wood},
author = {Jordi Sardans and Josep Pe{\~n}uelas},
journal = {Global Ecology and Biogeography},
year = {2013},
number = {4},
pages = {494--507},
volume = {22},
}
@Article{savage2010,
title = {Hydraulic trade-offs and space filling enable better predictions of vascular structure and function in plants},
volume = {107},
url = {http://www.pnas.org/content/107/52/22722},
doi = {10.1073/pnas.1012194108},
number = {52},
journal = {Proceedings of the National Academy of Sciences},
author = {V. M. Savage and L. P. Bentley and B. J. Enquist and J. S. Sperry and D. D. Smith and P. B. Reich and E. I. von Allmen},
year = {2010},
pages = {22722--22727},
}
@Article{schenk2002,
title = {Rooting depths, lateral root spreads and below-ground/above-ground allometries of plants in water-limited ecosystems},
author = {H. J. Schenk and R. B. Jackson},
journal = {Journal of Ecology},
year = {2002},
pages = {480--494},
volume = {90},
}
@Article{shinozaki1964a,
title = {A quantitative analysis of plant form-the pipe model theory: {II}. {Further} evidence of the theory and its application in forest ecology},
journal = {Japanese Journal of Ecology},
author = {K. Shinozaki and K. Yoda and K. Hozumi and T. Kira},
year = {1964},
note = {4},
pages = {133--139},
volume = {14},
}
@Article{shinozaki1964b,
title = {A quantitative analysis of plant form-the pipe model theory: {I.} {Basic} analyses},
author = {K. Shinozaki and K. Hozumi and {K.} and {Yoda} and T. Kira},
journal = {Japanese Journal of Ecology},
year = {1964},
pages = {97--105},
volume = {14},
}
@Article{simard2011,
title = {Mapping forest canopy height globally with spaceborne lidar},
volume = {116},
url = {http://onlinelibrary.wiley.com/doi/10.1029/2011JG001708/abstract},
doi = {10.1029/2011JG001708},
number = {G4},
journal = {Journal of Geophysical Research: Biogeosciences},
author = {Marc Simard and Naiara Pinto and Joshua B. Fisher and Alessandro Baccini},
year = {2011},
pages = {G04021},
}
@Article{sitch2003,
title = {Evaluation of ecosystem dynamics, plant geography and terrestrial carbon cycling in the {LPJ} dynamic global vegetation model},
author = {S. Sitch and B. Smith and I. C. Prentice and A. Arneth and A. Bondeau and W. Cramer and J. O. Kaplan and S. Levis and W. Lucht and M. T. Sykes and K. Thonicke and S. Venevsky},
journal = {Global Change Biology},
year = {2003},
pages = {161--185},
volume = {9},
}
@Article{valentinemakela2012,
title = {Modeling forest stand dynamics from optimal balances of carbon and nitrogen},
author = {Harry T. Valentine and Annikki M\"akel\"a},
journal = {New Phytologist},
year = {2012},
number = {4},
pages = {961--971},
volume = {194},
doi = {10.1111/j.1469-8137.2012.04123.x},
}
@Article{vanninen2005,
title = {Carbon budget for {Scots} pine trees: effects of size, competition and site fertility on growth allocation and production},
volume = {25},
journal = {Tree Physiology},
author = {P. Vanninen and A. M\"akel\"a},
year = {2005},
note = {1},
pages = {17--30},
}
@Manual{walsh2013,
title = {hier.part: Hierarchical Partitioning},
author = {Chris Walsh and Ralph {Mac Nally}},
year = {2013},
note = {R package version 1.0-4},
url = {http://CRAN.R-project.org/package=hier.part},
}
@Article{west1999,
title = {A general model for the structure and allometry of plant vascular systems},
volume = {400},
journal = {Nature},
author = {G. B. West and J. H. Brown and B. J. Enquist},
year = {1999},
note = {6745},
pages = {664--667},
}
@Article{wolf2011,
title = {Forest biomass allometry in global land surface models},
author = {Adam Wolf and Philippe Ciais and Valentin Bellassen and Nicolas Delbart and Christopher B. Field and Joseph A. Berry},
journal = {Global Biogeochemical Cycles},
year = {2011},
number = {3},
volume = {25},
doi = {10.1029/2010GB003917},
}
@Book{wood2006,
title = {Generalized additive models: an introduction with R},
author = {Simon N. Wood},
publisher = {Chapman \& Hall {CRC}},
year = {2006},
series = {Texts in Statistical Science},
}
@Article{woodward1995,
title = {A global land primary productivity and phytogeography model},
author = {F.I. Woodward and T.M. Smith and W.R. Emanuel},
journal = {Global Biogeochemical Cycles},
year = {1995},
note = {4},
pages = {471--490},
volume = {9},
}
@Article{worldclim,
title = {Very high resolution interpolated climate surfaces for global land areas},
author = {Robert J Hijmans and Susan E Cameron and Juan L Parra and Peter G Jones and Andy Jarvis},
journal = {International Journal of Climatology},
year = {2005},
number = {15},
pages = {1965--1978},
volume = {25},
publisher = {Wiley Online Library},
}
@Article{wright2004,
title = {The worldwide leaf economics spectrum},
volume = {428},
doi = {10.1038/nature02403},
journal = {Nature},
author = {I. J. Wright and P. B. Reich and M. Westoby and D. D. Ackerly and Z. Baruch and F. Bongers and J. Cavender-Bares and T. Chapin and J. H. C. Cornelissen and M. Diemer and J. Flexas and E. Garnier and P. K. Groom and J. Gulias and K. Hikosaka and B. B. Lamont and T. Lee and W. Lee and C. Lusk and J. J. Midgley and M. L. Navas and U. Niinemets and J. Oleksyn and N. Osada and H. Poorter and P. Poot and L. Prior and V. I. Pyankov and C. Roumet and S. C. Thomas and M. G. Tjoelker and E. J. Veneklaas and R. Villar},
year = {2004},
note = {6985},
pages = {821--827},
}
@Article{wrightetal2004,
title = {The worldwide leaf economics spectrum},
author = {I. J. Wright and P. B. Reich and M. Westoby and D. D. Ackerly and Z. Baruch and F. Bongers and J. Cavender-Bares and T. Chapin and J. H. C. Cornelissen and M. Diemer and J. Flexas and E. Garnier and P. K. Groom and J. Gulias and K. Hikosaka and B. B. Lamont and T. Lee and W. Lee and C. Lusk and J. J. Midgley and M. L. Navas and {\"U}. Niinemets and J. Oleksyn and N. Osada and H. Poorter and P. Poot and L. Prior and V. I. Pyankov and C. Roumet and S. C. Thomas and M. G. Tjoelker and E. J. Veneklaas and R. Villar},
journal = {Nature},
year = {2004},
pages = {821--827},
volume = {428},
doi = {10.1038/nature02403},
}
@Article{wullschleger2014,
title = {Plant functional types in {Earth} system models: past experiences and future directions for application of dynamic vegetation models in high-latitude ecosystems},
doi = {10.1093/aob/mcu077},
journal = {Annals of Botany},
author = {Stan D. Wullschleger and Howard E. Epstein and Elgene O. Box and Eug{\'e}nie S. Euskirchen and Santonu Goswami and Colleen M. Iversen and Jens Kattge and Richard J. Norby and Peter M. van Bodegom and Xiaofeng Xu},
year = {2014},
}
@Article{zomer2008,
title = {Climate change mitigation: {A} spatial analysis of global land suitability for clean development mechanism afforestation and reforestation},
author = {Robert J. Zomer and Antonio Trabucco and Deborah A. Bossio and Louis V. Verchot},
journal = {Agriculture, Ecosystems \& Environment},
year = {2008},
number = {1--2},
pages = {67--80},
volume = {126},
doi = {10.1016/j.agee.2008.01.014},
series = {International {Agricultural} {Research} and {Climate} {Change}: {A} {Focus} on {Tropical} {Systems}},
url = {http://www.sciencedirect.com/science/article/pii/S0167880908000169},