From 6207350cfbe8e95d072a27ebf384f2950b4dedf9 Mon Sep 17 00:00:00 2001 From: Henry Date: Tue, 4 Jun 2024 15:50:24 +0200 Subject: [PATCH] :sparkles: dry-run continuous configuration sample data - play also with sample data configuration --- .github/workflows/release.yaml | 34 ++++++++++++++++++++++++++++++++-- 1 file changed, 32 insertions(+), 2 deletions(-) diff --git a/.github/workflows/release.yaml b/.github/workflows/release.yaml index 2bc24c50..7aebc8bf 100644 --- a/.github/workflows/release.yaml +++ b/.github/workflows/release.yaml @@ -47,12 +47,42 @@ jobs: run: | cd tutorial move-dl data=random_small task=random_small__id_assoc_ttest --cfg job - move-dl data=random_small task=random_small__id_assoc_ttest task.training_loop.num_epochs=10 task.num_refits=4 + move-dl data=random_small task=random_small__id_assoc_ttest task.training_loop.num_epochs=30 task.num_refits=4 - name: Identify associations - bayes factors run: | cd tutorial move-dl data=random_small task=random_small__id_assoc_bayes --cfg job - move-dl data=random_small task=random_small__id_assoc_bayes task.training_loop.num_epochs=10 task.num_refits=4 + move-dl data=random_small task=random_small__id_assoc_bayes task.training_loop.num_epochs=30 task.num_refits=10 + run-tutorial-cont: + name: Run tutorial + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v4 + - uses: actions/setup-python@v5 + with: + python-version: "3.11" + - name: Install dependencies + run: pip install . + - name: Prepare tutorial data + run: | + cd tutorial + move-dl data=random_continuous task=encode_data + - name: Train model and analyze latent space + run: | + cd tutorial + move-dl data=random_continuous task=random_continuous__latent --cfg job + - name: Identify associations - t-test + run: | + cd tutorial + move-dl data=random_continuous task=random_continuous__id_assoc_ttest --cfg job + - name: Identify associations - bayes factors + run: | + cd tutorial + move-dl data=random_continuous task=random_continuous__id_assoc_bayes --cfg job + - name: Identify associations - KS + run: | + cd tutorial + move-dl data=random_continuous task=random_continuous__id_assoc_ks --cfg job publish: name: Publish package