From 0c80dff546398c69266daaa5dcdc663f02029d00 Mon Sep 17 00:00:00 2001 From: Dan Berrios Date: Fri, 26 Apr 2024 11:02:16 -0700 Subject: [PATCH 1/5] Specify by ID OBI:Planned Process for radiationexposures --- src/templates/RBO_classes.tsv | 644 +++++++++++++++++----------------- 1 file changed, 322 insertions(+), 322 deletions(-) diff --git a/src/templates/RBO_classes.tsv b/src/templates/RBO_classes.tsv index cb1d4f2..5024467 100644 --- a/src/templates/RBO_classes.tsv +++ b/src/templates/RBO_classes.tsv @@ -1,322 +1,322 @@ -Ontology ID Label editor preferred term has curation status alternative term definition definition source example of usage editor note term editor curator note ontology term requester term tracker item Logical Type Class Type Parent exact synonym Has Subset Member of superset db xref deprecated -ID LABEL A editor preferred term AI has curation status A alternative term SPLIT=| A IAO:0000115 A definition source SPLIT=| A example of usage SPLIT=| A editor note SPLIT=| A term editor SPLIT=| A rdfs:comment SPLIT=| A ontology term requester A term tracker item TYPE CLASS_TYPE C % SPLIT=| A oboInOwl:hasExactSynonym C 'has subset some % SPLIT=| C 'part of' superset % A http://www.geneontology.org/formats/oboInOwl#hasDbXref A owl:deprecated -obo:RBO_00000001 ionizing radiation categorized by source Ionizing radiation classified by the material entity which generates or emits it. obo:RBO_00000116 -obo:RBO_00000002 space radiation Radiation originating outside the Earth's atmosphere. http://purl.obolibrary.org/obo/RBO_00000001 -obo:RBO_00000003 ground radiation Radiation produced on Earth or on another planetary body by natural or artificial means. One of the principal sources of ground radiation is radon gas. http://purl.obolibrary.org/obo/RBO_00000001 -obo:RBO_00000004 tissue equivalent material Material presenting, when irradiated, interaction properties similar to those of soft tissue. ICRP glossary (http://icrpaedia.org/Tissue_equivalent_material) BFO:0000040 -obo:RBO_00000010 light ion An atomic nucleus, fully stripped of its orbital electrons, and containing 2, 3, 4, 5, or 6 protons. charged particle|atomic nucleus -obo:RBO_00000011 active dosimeter A radiation measuring device which records dose at the time of detection, with data available in real time Ionization chambers and silicon solid state detectors can be used as active dosimeters. obo:RBO_00000115 -obo:RBO_00000012 passive dosimeter A radiation measuring device which integrates the amount of radiation to which it is exposed. Passive detectors are interrogated at a later time to determine the dose. Thermoluminescent dosimeters and plastic nuclear track detectors are passive detectors. obo:RBO_00000115 -obo:RBO_00000013 background ionizing radiation The amount of ionizing radiation to which a member of the population on Earth is exposed from natural sources, such as terrestrial radiation from naturally-occurring radionuclides in the soil, cosmic radiation originating in outer space, and naturally-occurring ra obo:RBO_00015000 -obo:RBO_00000014 effective dose The sum of the equivalent doses to all organs in the body, each adjusted to account for the sensitivity of the organ to radiation. Effective dose is calculated for the whole body. Effective dose is expressed in millisieverts (mSv). The effective dose was calculated to be 300 mSv. radiation dose -obo:RBO_00000015 mixed radiation The process of exposing the same sample to more than one type and/or energy of radiation, in sequence or simultaneously. The samples were exposed to a mixed radiation field consisting of several ions at different energies. particle accelerator radiation mixed field|mixed radiation field -obo:RBO_00000016 radiation environment Radiation classified by where the exposure to the radiation is occurring. ENVO:01000254 -obo:RBO_00000017 earth surface That part of the Earth exposed to the Earth atmosphere. radiation environment -obo:RBO_00000018 earth atmosphere The region between the Earth's surface and an altitude of approximately 100 km radiation environment -obo:RBO_00000019 low earth orbit LEO The region of outer space between the Earth's atmosphere and the innermost Earth radiation belt ENVO:01000637 LEO -obo:RBO_00000020 beyond low earth orbit BLEO That part of outer space beyond the Earth's radiation belts. ENVO:01000637 BLEO -obo:RBO_00000021 fractionated radiation exposure fractionated A radiation dose administered in two or more exposures at specified time intervals obo:RBO_00002000 -obo:RBO_00000022 millirad A unit of absorbed dose equal to 1/1000 of a rad UO:1000135 mrad -obo:RBO_00000023 equivalent dose The product of the mean absorbed dose in an organ or tissue and the radiation weighting factor (w_R )of the radiation type of interest The equivalent dose was calculated to be 300 mSv. radiation dose -obo:RBO_00000024 dose fraction The absorbed radiation dose administered in a single one of a series comprising a fractionated radiation exposure The total dose was administered in five dose fractions. radiation dose -obo:RBO_00000026 cosmic radiation Penetrating ionizing radiation, both particulate and electromagnetic, that originates in outer space space radiation -obo:RBO_00000027 galactic cosmic radiation Galactic cosmic radiation consists of high-energy charged particles originating from outside the solar system Galactic cosmic radiation is one of the principal sources of radiation dose outside low-earth orbit cosmic radiation -obo:RBO_00000028 solar cosmic radiation Solar cosmic radiation is high-energy charged particles that originate from the sun. Solar cosmic radiation contributes to the radiation dose to humans in space. cosmic radiation -obo:RBO_00000029 dose rate The measurement datum representing a dose to an organism or object per unit time. The dose rate was 0.5 mGy/min. IAO:0000109 -obo:RBO_00000033 spacecraft Vehicles, crewed or uncrewed, which are designed to orbit about the Earth or another celestial body or be placed into a trajectory to another celestial body or location in space. NASA Thesaurus, 1988 The Apollo spacecraft took 24 astronauts to the Moon between 1968 and 1972. OBI:0000968 CHEBI:33250 -obo:RBO_00000044 spacecraft module a self-contained unit of a spacecraft spacecraft -obo:RBO_00000045 international space station module ISS module A self-contained unit of the International Space Station. The experiment was conducted in the International Space Station module Columbus|The experiment was conducted on the Russian module of the ISS. spacecraft module -obo:RBO_00000046 space station A spacecraft capable of supporting a human crew in orbit for an extended period of time. It lacks major propulsion or landing systems. Stations must have docking ports to allow other spacecraft to dock to transfer crew and supplies. Wikipedia Mir was a space station that operated in low Earth orbit from 1986 to 2001, operated by the Soviet Union and later by Russia. spacecraft -obo:RBO_00000047 particle accelerator beamline The path leading from a particle accelerator to an experimental station used in experiments in particle physics, materials science, chemistry, and molecular biology, or in irradiation tests or to produce isotopes. Wikipedia The HIMAC accelerator has a beamline dedicated for radiation biology experiments. obo:RBO_00000121 -obo:RBO_00000049 particle accelerator radiation Radiation produced by a particle accelerator. ground radiation -obo:RBO_00000050 nuclear reactor radiation Radiation produced by a nuclear reactor. ground radiation -obo:RBO_00000051 cesium-137 gamma radiation Cs-137 gamma High energy photons emitted during nuclear decay of the Cesium-137 isotope. obo:RBO_00000120 Cs-137 -obo:RBO_00000052 cobalt-60 gamma radiation Co-60 gamma High energy photons emitted during nuclear decay of the Cobalt-60 isotope. obo:RBO_00000120 Co-60 -obo:RBO_00000058 cobalt-57 gamma radiation Co-57 gamma High energy photons emitted during nuclear decay of the Cobalt-57 isotope. obo:RBO_00000120 Co-57 obo:RBO_00000060 -obo:RBO_00000060 radionuclide Isotopes that exhibit radioactivity and undergo radioactive decay. (From Grant & Hackh's Chemical Dictionary, 5th ed & McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) http://purl.bioontology.org/ontology/MESH/D011868 CHEBI:33250 -obo:RBO_00000061 actinide A series of radioactive elements from ACTINIUM, atomic number 89, to and including LAWRENCIUM, atomic number 103 http://purl.bioontology.org/ontology/MESH/D008671 radionuclide -obo:RBO_00000062 actinium A trivalent radioactive element and the prototypical member of the actinide family. It has the atomic symbol Ac, and atomic number 89. Its principal isotope is 227 and it decays primarily by beta-emission. http://purl.bioontology.org/ontology/MESH/D000186 actinide -obo:RBO_00000063 americium A completely man-made radioactive actinide with atomic symbol Am, and atomic number 95. Its valence can range from +3 to +6. Because of its nonmagnetic ground state, it is an excellent superconductor. It is also used in bone mineral analysis and as a radiation source for radiotherapy http://purl.bioontology.org/ontology/MESH/D000576 actinide -obo:RBO_00000064 californium A man-made radioactive actinide with atomic symbol Cf, atomic number 98, and atomic weight 251. Its valence can be +2 or +3. Californium has medical use as a radiation source for radiotherapy http://purl.bioontology.org/ontology/MESH/D002142 actinide -obo:RBO_00000065 neptunium A radioactive element of the actinide metals family. It has the atomic symbol Np, and atomic number 93. http://purl.bioontology.org/ontology/MESH/D009405 actinide -obo:RBO_00000066 plutonium A naturally radioactive element of the actinide metals series. It has the atomic symbol Pu, and atomic number 94. Plutonium is used as a nuclear fuel, to produce radioisotopes for research, in radionuclide batteries for pacemakers, and as the agent of fission in nuclear weapons. http://purl.bioontology.org/ontology/MESH/D011005 actinide -obo:RBO_00000067 thorium A radioactive element of the actinide series of metals. It has an atomic symbol Th, atomic number 90, and atomic weight 232.04. It is used as fuel in nuclear reactors to produce fissionable uranium isotopes. Because of its radioopacity, various thorium compounds are used to facilitate visualization in roentgenography. http://purl.bioontology.org/ontology/MESH/D013910 actinide -obo:RBO_00000068 uranium A radioactive element of the actinide series of metals. It has an atomic symbol U, atomic number 92, and atomic weight 238.03. U-235 is used as the fissionable fuel in nuclear weapons and as fuel in nuclear power reactors. http://purl.bioontology.org/ontology/MESH/D014501 actinide -obo:RBO_00000069 ultraviolet radiation UV UV radiation Electromagnetic radiation with photon energies approximately 3-120 eV. High energy UV radiation can be ioinizing. http://son.nasa.gov/tass/content/electrospectrum.htm obo:RBO_00000114 -obo:RBO_00000070 radioprotectant radioprotector A substance present at the time of irradiation that mitigates or prevents the biological effects of irradiation. Richard T. Hoppe, Theodore Locke Phillips, Mack Roach, Leibel and Phillips Textbook of Radiation Oncology (Third Edition), W.B. Saunders, (2010), ISBN 9781416058977, https://doi.org/10.1016/B978-1-4160-5897-7.00093-7. E.G. amifostine. CHEBI:24432 -obo:RBO_00000071 radionuclide chelator Radionuclide chelators are small organic molecules or in some cases larger peptides that chemically sequester the radionuclide ion by forming a complex that determines the thermodynamic stability and kinetic inertness of the radionuclide. CHEBI:24432 -obo:RBO_00000072 co-carcinogen A co-carcinogen is generally a chemical that promotes the effects of a carcinogen in the production of cancer. In some circumstances exposure to radiation or physical trauma is considered to be co-carcinogenic. CHEBI:24432 -obo:RBO_00000073 radiation response modifier Radiation response modifiers are agents that alter tumor or normal tissue response to radiation, such as radiation sensitizers and radiation protectors. Citrin DE, Mitchell JB. Altering the response to radiation: sensitizers and protectors. Semin Oncol. 2014 Dec;41(6):848-59. doi: 10.1053/j.seminoncol.2014.09.013. Epub 2014 Oct 7. PMID: 25499642; PMCID: PMC4270009. CHEBI:24432 -obo:RBO_00000074 peptide radiation response modifier Radiation response modifiers that are peptides. Shaghaghi, Zahra et al. “Potential utility of peptides against damage induced by ionizing radiation.” Future oncology (2021): doi/10.2217/fon-2020-0577 radiation response modifier -obo:RBO_00000075 small molecule radiation response modifier Radiation response modifiers that are small molecules. radiation response modifier -obo:RBO_00000076 nuclear industry worker A person employed or otherwise working in commercial activities where nuclear materials are created, handled or disposed and at risk of occupational radiation exposure. Excludes health workers. Nezahat Hunter, Richard G.E. Haylock, Michael Gillies, Wei Zhang; Extended analysis of solid cancer incidence among the Nuclear Industry Workers in the UK: 1955–2011. Radiat Res 2022; doi: https://doi.org/10.1667/RADE-20-00269.1 occupational role -obo:RBO_00000077 astronaut occupational role -obo:RBO_00000078 military occupational role -obo:RBO_00000079 medical professional occupational role -obo:RBO_00000080 dentist medical professional -obo:RBO_00000081 radiologist medical professional -obo:RBO_00000082 radiobiology study type radiobiology investigation The theme or modality of an experimental, theoretical, critical or summative study involving radiation, radioactive materials including their impacts on orgnisms and society. OBI:0000011 -obo:RBO_00000083 epidemiological study An epidemiological study is the study (scientific, systematic, and data-driven) of the distribution (frequency, pattern) and determinants (causes, risk factors) of health-related states and events (not just diseases) in specified populations (neighborhood, school, city, state, country, global) https://www.cdc.gov/csels/dsepd/ss1978/lesson1/section1.html radiobiology study type -obo:RBO_00000084 environmental study A study of the impact of radiation on the composition of or processes within the natural or anthropogenic environment. radiobiology study type A owl:deprecated -obo:RBO_00000085 lifespan study A study who endpoint is the lifespan of the organism under investifgation. radiobiology study type -obo:RBO_00000086 carcinogenesis study A study of the effect of agents including radiation, seperately or together, on the incidence or type of neoplasia or pre-neoplasia. radiobiology study type -obo:RBO_00000087 tissue damage study A study in which the structural or processual damage to normal tissue caused by radiation is assessed. Often by histopathology or molecular profiling. radiobiology study type -obo:RBO_00000088 dna damage and repair study A study of the mechanism or effects of radiation on dna damage and its repair. radiobiology study type -obo:RBO_00000089 physiological study A study of the effects of internal or external radiation on cellular or organismal physiology. radiobiology study type -obo:RBO_00000090 anatomical study A study of the effects of radiation on the integrity, composition and quality of adult, fetal or embryonic anatomical structures. radiobiology study type -obo:RBO_00000091 external exposure study A study of the effects of external irradiation on an organism. radiobiology study type -obo:RBO_00000092 internal contamination study A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. radiobiology study type -obo:RBO_00000093 mixed exposure route study A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. radiobiology study type -obo:RBO_00000094 acute external exposure study A study of the effects of external irradiation on an organism where the most of the dose is given in a single or small number of fractions closely in time. external exposure study -obo:RBO_00000095 chronic external exposure study A study of the effects of external irradiation on an organism where the dose is given over a protracted time period either continuously or in many fractions. Often these are lose dose studies. external exposure study -obo:RBO_00000096 chronic internal contamination study A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. The dose is delivered over a long period of time, often continuously and generlly at low dose. For example long term Radon exposure by inhalation. internal contamination study -obo:RBO_00000097 acute internal contamination study A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. Most of the dose is given over a short period of time and is generally unfractionated, such as in brachytherapy. internal contamination study -obo:RBO_00000098 acute mixed exposure route study A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. Acute exposure involves usually a single exposure over a short period of time with no fractionation. mixed exposure route study -obo:RBO_00000099 chronic mixed exposure route study A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. Chronic exposure involves usually a continuous or highly fractionated exposure over a long period of time. mixed exposure route study -obo:RBO_00000100 gene expression study A study of the effects of radiation on gene expression. radiobiology study type -obo:RBO_00000101 proteomics study A study of the effects of radiation on the proteome or individual proteins. radiobiology study type -obo:RBO_00000102 marker discovery study A study that aims at the discovery of protein, RNA or other molecular entities or modifcations that can act as reliable surrogates for the prediction or measurement of the effects of radiation or the response of the organism to radiation. radiobiology study type -obo:RBO_00000103 therapeutics study A study that aims at the discovery, development or assessment of efficacy of therapeutic agents or processes designed to mitigate or cure the effects of radiation exposure. radiobiology study type A owl:deprecated -obo:RBO_00000104 survival study "A study that uses survival as an endpoint. Generally applicable to animal studies rather than human studies which would use the ""lifespan"" measure (RBO:00000085)" radiobiology study type -obo:RBO_00000105 metabolomics study A study of the effects of radiation on the metabolome or individual metabolites. radiobiology study type -obo:RBO_00000106 nuclear accident study A study of the contributing factors consequences and prevention of nuclear accidents radiobiology study type A owl:deprecated -obo:RBO_00000107 toxicity study A study of the toxicity of chemical or biological agents on cells or whole organisms. radiobiology study type -obo:RBO_00000108 endocrine study A study of the effects of radiation on the endocrine system or of endocrine hormones on the effects of radiation. obo:RBO_00000089 -obo:RBO_00000109 offspring study transgenerational study A study of the effects of radiation on the offspring of an irradiated animal or plant. radiobiology study type -obo:RBO_00000110 biokinetics study pharmacokinetics A study of the distribution and metabolism orf drugs or biologicals used for therapeutic purposes. radiobiology study type -obo:RBO_00000111 occupational role A set of behaviours that have some socially agreed upon function and for which there is an accepted code of norms. This may refer to a role within an organisation or within society as a whole. For example a Profession” can be defined as a cluster of occupational roles, or roles in which the incumbents perform certain functions valued in the organisation or society. BFO:0000023 -obo:RBO_00000112 high linear energy transfer radiation Neutrons or charged particles, such as protons or alpha particles that produce ionizing events densely spaced on a molecular scale (e.g., >10 keV-micron^[-1]. NCRP https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf obo:RBO_00000116 NCIT:C17052 -obo:RBO_00000113 low linear energy transfer radiation X and gamma rays or light charged particles such as electrons that produce sparse ionizing events far apart on a molecular scale. NCRP https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf obo:RBO_00000116 low LET|low-LET NCIT:C17052 -obo:RBO_00000114 ionizing electromagnetic radiation Electromagnetic radiation having sufficient energy to remove one or more electrons from an atom obo:RBO_00000116 -obo:RBO_00000115 radiation dosimeter device radiation dosimeter radiation dosimeter A device that is used to measure the amount of ionizing radiation exposure or absorption. NCIT OBI:0000968 dosimeter NCIT:C150121 -obo:RBO_00000116 ionizing radiation ionising radiation Particle or electromagnetic radiation with sufficient energy to liberate one or more electrons from an atom. obo:RBO_00015000 ionising radiation NCIT:C17052 -obo:RBO_00000117 charged particle radiation charged particle charged particle Charged particles with kinetic energy imparted by natural or artificial means (such as by a particle accelerator) obo:RBO_00015000 NCIT:C18982 -obo:RBO_00000118 risk estimate OBI:0001909 NCIT:C19015 -obo:RBO_00000119 lifetime risk estimate obo:RBO_00000118 NCIT:C19662 -obo:RBO_00000120 gamma radiation electromagnetic radiation with photon energies greater than approximately 100 keV http://son.nasa.gov/tass/content/electrospectrum.htm obo:RBO_00000114 NCIT:C44386 -obo:RBO_00000121 particle accelerator A device used to impart kinetic energy to subatomic particles by means of electric and magnetic fields OBI:0000968|obo:RBO_00005014 NCIT:C94854 -obo:RBO_00000122 nuclear reactor A device in which nuclear fission may be initiated and controlled in a self-sustaining chain reaction to generate energy or produce useful radiation. OBI:0000968|obo:RBO_00005014 MESH:D009688 -obo:RBO_00000123 biological process BFO:0000015 GO:0008150 owl:deprecated -obo:RBO_00000124 cellular process obo:RBO_00000123 GO:0009987 owl:deprecated -obo:RBO_00005001 heavy ion radiation Atomic nuclei, with atomic number 2 or greater and kinetic energy imparted by natural or artificial means obo:RBO_00000117 -obo:RBO_00005002 light ion radiation Atomic nuclei, variously defined as having atomic number 2, 3, 4, 5 or 6 and kinetic energy imparted by natural or artificial means obo:RBO_00000117 -obo:RBO_00005003 charged particle A particle with a positive or negative electric charge BFO:0000040 -obo:RBO_00005009 space flight space flight spaceflight Activity carried out by crewed or robotic vehicles outside the Earth's atmmosphere. ENVO:03000010 Space flight -obo:RBO_010000 as low as reasonably achievable ALARA ALARA A principle of radiation protection philosophy that requires that exposures to ionizing radiation be kept as low as reasonably achievable, economic and social factors being taken into account. The protection from radiation exposure is ALARA when the expen NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) One of the measures to ensure ALARA is to minimize the time spent working around radioactive materials. Jack Miller obo:IAO_0000104 ALARA -obo:RBO_010001 radiation attenuation The reduction of radiation intensity upon passage of radiation through matter NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Attenuation in concrete or leadshielding is a common method of radiation protection on Earth, but is impractical in space due to mass constraints. Jack Miller BFO:0000182 -obo:RBO_010002 biodosimetry Use of a biological response as an indicator of a dose of an effective agent (e.g., the extent of decline in peripheral blood lymphocytes of humans exposed to ionizing radiation can be used as an indicator of the absorbed dose to the whole body from that NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Biodosimetry was used to measure the exposure of some victims of the Chernobyl nuclear accident. Jack Miller CHMO:0002796 -obo:RBO_010003 bystander effect The term used to describe the effects on cells in proximity to irradiated cells, but through which radiation has not passed. In experimental radiation biology, the bystander effect can be investigated by targeting individual cells, or by using doses low enough that the probability for a given cell to be hit by a particle is less than one. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The bystander effect can be studied by identifying cells that were traversed by a charged particle. Jack Miller obo:RBO_00005074 -obo:RBO_010006 delta ray delta electron Highly energetic electrons produced during inelastic collisions between ionizing radiation and atomic electrons. In a small proportion of collisions, the ejected electron receives a considerable amount of energy (i.e., >1,000 eV), allowing it to travel a NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Delta ray energies increase with the velocity of the incident particle. Jack Miller charged particle radiation delta electron -obo:RBO_010007 dose equivalent The product of the absorbed dose (D) at a point and the quality factor (Q) at that point for the radiation type (i.e., H = DQ). The unit of H is J-kg^[-1] with the special name sievert (Sv) NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The average annual dose equivalent for crew members on the ISS is approximately 300 mSv. Jack Miller radiation dose -obo:RBO_010008 excess lifetime risk of cancer The increased risk from induced cancer due to exposure when the effects over an entire lifetime are accounted for. Individuals who would have died of cancer anyway but die early because of exposure are not included NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Jack Miller obo:RBO_00000119 -obo:RBO_010009 fast neutron Neutrons of energies above a few hundred kiloelectron volts (keV) NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The sample was irradiated with fast neutrons. Jack Miller obo:RBO_00015001 -obo:RBO_010010 fluence The number of particles or photons per unit of cross-sectional area perpendicular to the direction of the particle (units of m^2 or cm^2) (i.e., particles-m^[-2] or particles-cm^[-2]). NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The value of the fluence was approximately 1 particle per cm2. Jack Miller IAO:0000109 -obo:RBO_010011 flux The quotient of dN by dt, where dN is the increment of the particle number in the time interval dt. The unit for flux is reciprocal second (s^[-1].) NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The flux of cosmic ray muons per cm2 at the surface of the Earth is approximately 1.0. Jack Miller IAO:0000109 -obo:RBO_010012 heavy ion An atomic nucleus, fully stripped of its orbital electrons, containing 2 or more protons. Nuclei containing between 2 protons (helium) and 6 protons (carbon) are sometimes referred to as light ions. In RBO--needs def from NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Jack Miller CHEBI:33252|obo:RBO_00005003 -obo:RBO_010013 linear energy transfer LET The energy deposited by an ionizing charged particle or photon in any medium per unit path length. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Biological effects are a function of LET. Jack Miller IAO:0000109 LET -obo:RBO_010014 organ dose The mean absorbed radiation dose in a specified tissue or organ of the human body. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Radiation protection standards take into account organ dose as well as whole body dose. Jack Miller radiation dose -obo:RBO_010015 quality factor Dimensionless factor developed for purposes of radiation protection and assessing health risks in general terms that accounts for the relative biological effectiveness of different radiations in producing stochastic effects and is used to relate absorbed NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Neutrons have a high quality factor compared to photons. Jack Miller OBI:0001909 -obo:RBO_010016 radiation dose "A measurement datum of the quantity of radiation absorbed by a substance or organism. The term ""radiation dose"" may for example refer to absorbed dose, organ dose, dose equivalent or equivalent dose, depending upon context and weighting factor(s)." "The samples received a dose of 1 Gy. (The use of the gray unit implies that ""dose"" refers to a measured quantity, typically absorbed dose or organ dose.)|The samples received a dose of 1 Sv. (The use of the sievert unit implies that ""dose"" refers to a der" Jack Miller OBI:0000984 -obo:RBO_010017 radiation quality Is a quality of radiation that reflects the fluence spectrum of charged and neutral particles within the material or medium where dose is being deposited. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) and see https://melodi-online.eu/wp-content/uploads/2021/04/02-What-is-radiation-quality-Goodhead.pdf Radiation quality is often expressed in terms of the linear energy transfer of the ionising particles that deliver the absorbed dose. Rossi, Harald H. Specification of Radiation Quality. Radiation Research, vol. 10, no. 5, Radiation Research Society, 1959, pp. 522 31, https://doi.org/10.2307/3570787. But this is an over simplification. Jack Miller PATO:0001018 TRUE -obo:RBO_010018 radiation weighting factor A factor used to allow for differences in the biological effectiveness between different radiations when calculating equivalent dose (H_T) (see equivalent dose). These factors are independent of the tissue or organ irradiated. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Radiation weighting factors may change as more data on biological effects are obtained. Jack Miller OBI:0001909 -obo:RBO_010019 relative biological effectiveness RBE Factor used to compare the biological effectiveness of absorbed doses from different types of ionizing radiation, determined experimentally. RBE is the ratio of the absorbed dose of a reference radiation to the absorbed dose of the radiation in question r NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Neutrons have been found to have a higher RBE than electrons. Jack Miller IAO:0000109 RBE -obo:RBO_010020 tissue equivalence Denotes a substance with absorbing and scattering properties for a given radiation that sufficiently match those of a particular biological tissue. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Tissue equivalent materials can be used to study radiation effects at depth in the human body. Jack Miller PATO:0001018 -obo:RBO_00005010 absorbed radiation dose The amount of energy from any type of ionizing radiation deposited in a specified mass of any medium. Jack Miller obo:RBO_010016 -obo:RBO_00005011 absorbed radiation dose rate The amount of energy from any type of ionizing radiation deposited in a specified mass of any medium per unit time. Jack Miller obo:RBO_00000029 -obo:RBO_00005012 ionizing radiation energy The kinetic energy carried by a particle or photon of ionizing radiation. Jack Miller obo:RBO_00000116 -obo:RBO_00005013 x-ray radiation x-ray x-ray Electromagnetic radiation with photon energies approximately between 0.1 and 120 keV. The upper end of the x-ray spectrum overlaps with the lower end of the gamma ray spectrum. http://son.nasa.gov/tass/content/electrospectrum.htm Jack Miller obo:RBO_00000114 -obo:RBO_00005014 radiation source A material entity which emits radiation Jack Miller material entity -obo:RBO_00005015 sham irradiation sham irradiation sham Sham irradiation refers to a procedure in which participants or subjects in an experiment are exposed to simulated radiation, mimicking precisely the conditions of actual irradiation. The purpose of using sham irradiation is to create a control group that experiences the non-specific effects of the experimental setup, while excluding the specific effects associated with radiation exposure. Jack Miller obo:OBI_0000272 -obo:RBO_00005016 radiation fractionation protocol fractionation protocol fractionation protocol A protocol for administering a total radiation dose in two or more increments separated by a specified time interval Jack Miller obo:IAO_0000104 -obo:RBO_00005017 cis-lunar space cis-lunar space The region of space between the Earth and the Moon Jack Miller obo:RBO_00000016 -obo:RBO_00005018 lunar orbit lunar orbit A region of space defined by a regular, repeating path of a specified object about Earth's moon Jack Miller obo:RBO_00000016 -obo:RBO_00005019 lunar surface lunar surface The area of the lunar landmass exposed to space Jack Miller obo:RBO_00000016 -obo:RBO_00005020 cis-mars space cis-Mars space The region of space between the Earth and Mars Jack Miller obo:RBO_00000016 -obo:RBO_00005021 mars orbit Mars orbit A region of space defined by a regular, repeating path of a specified object about Mars Jack Miller obo:RBO_00000016 -obo:RBO_00005022 mars surface Mars surface The area of the Mars landmass exposed to the Martian atmosphere Jack Miller obo:RBO_00000016 -obo:RBO_00005023 interplanetary space interplanetary space The region of space in the Solar System between planets Jack Miller obo:RBO_00000016 -obo:RBO_00005024 planet surface planet surface The outermost solid or liquid area of a planet Jack Miller obo:RBO_00000016 -obo:RBO_00005025 non-irradiated non-irradiated An organism or material entity kept unexposed to radiation, for purposes of comparison to a similar organism or material entity that has been exposed to radiation Jack Miller PATO:0001241 -obo:RBO_00005026 ground analog study ground analog experiment ground analog A study at a ground facility designed so as to replicate one or more conditions in space (e.g. radiation, microgravity, isolation) Jack Miller obo:RBO_00000082 -obo:RBO_00005027 ground control study ground control ground control An study at a ground facility designed so as to replicate conditions in space (e.g. radiation, microgravity, isolation) with the exception of one condition, so as to ascertain the effects of that condition on an organism or instrument Jack Miller obo:RBO_00000082 -obo:RBO_00005028 irradiation protocol irradiation protocol A protocol for administering radiation to a sample Jack Miller OBI:0000272 -obo:RBO_00005029 radiation fraction radiation fraction fraction One of the series of individual doses administered to a sample in a fractionated irradiation. Jack Miller dose fraction -obo:RBO_00005030 radiation fraction interval radiation fraction interval Time between fractions in a fractionated irradiation. Jack Miller dose rate -obo:RBO_00005031 high altitude high altitude The region of the atmosphere above 8000 feet above sea level. Altitudes above 12000 feet are sometimes referred to as very high altitude, and above 18000 feet as extremely high altitude. https://www.medicinenet.com/high_altitude/definition.htm Jack Miller OBI:0002983 -obo:RBO_00005032 sham-irradiated sham A quality of a biotic or abiotic sample or individual which is part of an experiment that tests the effects of radiation on organisms or materials by isolating variables as dictated by the scientific method in order to make a conclusion about the effect of such variables. In sham irradiation the precise treatment of the sample must be identical to that of the experimental samples and should be made explicit in the description of the method. "The class should be used in cases where it is clear that the control sample was treated in precisely the same way as the experimental samples or sham irradiation is specified. It is therefore a more restricted quality definition than ""non-irradiated"". It is likely to be used more often with external radiation exposure or exposure to a beam, and with a biological rather than abiotic sample." Jack Miller non-irradiated -obo:RBO_00005033 parabolic flight aircraft parabolic flight Vomit Comet An aircraft which flies a series of parabolic arcs to simulate micrgravity. Jack Miller ENVO:01001488 -obo:RBO_00005034 high altitude research aircraft An aircraft which flies at altitudes greater than commercial aircraft altitudes for research purposes. Jack Miller ENVO:01001488 -obo:RBO_00005035 uncrewed aerial vehicle UAV UAV An research aircraft designed to operate without crew members, either autonomously or under control from a ground station Jack Miller ENVO:01001488 -obo:RBO_00005036 highly charged energetic nucleus HZE HZE|highly charged energetic nuclei Fully ionized atomic nucleus with 2 or more protons and energies in excess of tens of MeV per nucleon Jack Miller CHEBI:36347 -obo:RBO_00005037 adaptive radiation response study adaptive A study of a response to radiation conditioned by prior administration of radiation of a different type and/or at a different dose or dose rate Jack Miller obo:RBO_00000082 -obo:RBO_00005038 average fractionated dose rate The total dose administered in a series of radiation fractions divided by the elapsed time between the beginning of the first exposure fraction and the end of the last exposure fraction Jack Miller dose rate -obo:RBO_00005039 gamma irradiator A device which exposes samples to gamma radiation. Jack Miller radiation source -obo:RBO_00005040 particle charge charge The electric charge of a particle used in an irradiation Jack Miller UO:0000219 -obo:RBO_00005041 radiation dosimetry The measurement of the amount of radiation taken up by a sample. Jack Miller dosimetry -obo:RBO_00005042 microbeam A microbeam is a narrow beam of radiation, of micrometer or sub-micrometer dimensions. Together with integrated imaging techniques, microbeams allow precisely defined quantities of damage to be introduced at precisely defined locations. Wikipedia Jack Miller particle accelerator -UO:0000127 IAO:0000003 -obo:RBO_00005066 miligray per second mGy/sec mGy/sec A derived absorbed dose unit which is equal to one milligray absorbed per second UO:0000129 UO:0010065 TRUE -obo:RBO_00005067 indirect cellular response to stimulus Indirect cellular response to stimulus Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus which acts on another cell and not on the responding cell. The process begins with detection of the stimulus by a cell and ends with a change in state or activity of a different cell Paul Schofield This could be used to describe a tissue response to immune stimulation, so for example an IL2 response of endothelial cells in response to lymphocytes stimulated by pathogen. GO:0051716 -obo:RBO_00005068 indirect cellular response to radiation Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of radiation acting on another cell and not on the responding cell. The process begins with detection of radiation by a cell or cells and ends with a change in state or activity of a different cell or cells. Paul Schofield The most obvious example is the bystander effect ( Carmel Mothersill, Andrej Rusin, Cristian Fernandez-Palomo & Colin Seymour (2018) History of bystander effects research 1905-present; what is in a name?, International Journal of Radiation Biology, 94:8, 696-707, DOI: 10.1080/09553002.2017.1398436) where a naive cell behaves as if it has been irradiated because of its communication with an irradiated cell. It may also be used to describe the abscopal effect. Note that abscopal effects have been noted for ionising and non-ionising ( RF) radiation, eg. L?ffler MW. et al. . A Non-interventional Clinical Trial Assessing Immune Responses After Radiofrequency Ablation of Liver Metastases From Colorectal Cancer. Front Immunol. 2019 Nov 19;10:2526. doi: 10.3389/fimmu.2019.02526. PMID: 31803175; PMCID: PMC6877671 obo:RBO_00005067 -obo:RBO_00005069 indirect cellular response to ionising radiation Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to ionising radiation which acts on another cell and not on the responding cell. The process begins with detection of the ionising radiation by one cell or cells and ends with a change in state or activity of a different cell or cells. Paul Schofield Directly describes the bystander effect (Carmel Mothersill, Andrej Rusin, Cristian Fernandez-Palomo & Colin Seymour (2018) History of bystander effects research 1905-present; what is in a name?, International Journal of Radiation Biology, 94:8, 696-707, DOI: 10.1080/09553002.2017.1398436) but can alo sbe used to describe phenomena related to the abscopal effect, manifest in whole organisms where irradiation of one part of the organism causes changes in another un-irradiated component. obo:RBO_00005068 -obo:RBO_00005070 ionizing radiation device A device for exposing materials or biological organisms to ionizing radiation for research or therapeutic purposes. radiation source -obo:RBO_00005071 high-altitude balloon High-altitude balloons are crewed or uncrewed balloons, usually filled with helium or hydrogen, that are released into the stratosphere, generally attaining between 18 and 37 km (11 and 23 mi; 59,000 and 121,000 ft) above sea level. Wikipedia Jack Miller aircraft -obo:RBO_00005072 space flight spaceflight Travel beyond the Earth's atmosphere Jack Miller PATO:0002062 -obo:RBO_00005074 non-targeted effects of ionising radiation non-targeted effects of ionising radiation NTE|non-targeted effects Non-targeted effects of ionising radiation are characterised by cellular responses that occur in cells in which energy from ionizing radiation has not been deposited. The distinct classes of non-targeted effects include Genomic Instability, and Bystander effect which latter includes Abscopal effects and Bystander-mediated adaptive response. These can also arise non-clonally in the progeny of irradiated somatic or germ cells, resulting in radiation-induced genomic instability and transgenerational genomic instability respectively. (Kadhim M, Salomaa S, Wright E, et al. Non-targeted effects of ionising radiation--implications for low dose risk. Mutat Res. 2013;752(2):84-98. doi:10.1016/j.mrrev.2012.12.001) Paul Schofield ORCID: 0000-0002-5111-7263 obo:RBO_00005069 -obo:RBO_00002000 radiation exposure Irradiation The process by which an entity is exposed to electromagnetic or acoustic radiation radiation energy internally or externally. 0000-0002-5111-7263 energy transfer process -obo:RBO_00002001 accidental radiation exposure Accidental irradiation Unplanned exposure to radiation of any type in any environment or otherwise planned process. 0000-0002-5111-7263 radiation exposure -obo:RBO_00002007 anthropogenic radiation exposure Exposure to human generated radiation Exposure to ionising radiation created by a man-made machine or exposure to a fixed source. For example a cobalt source, an X ray machine, an acceleratororf a nucler weapon. 0000-0002-5111-7263 radiation exposure -obo:RBO_00002002 planned radiation exposure Planned irradiation Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally. 0000-0002-5111-7263 anthropogenic radiation exposure|planned process -obo:RBO_00002003 medical diagnostic radiation exposure Diagnostic irradiation Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a diagnosis of disease. 0000-0002-5111-7263 planned anthropogenic radiation exposure -obo:RBO_00002004 exposure to naturally ocurring radioactive material Environmental irradiation Exposure to naturally occurring radiation (NORM) of any type in any environment . 0000-0002-5111-7263 radiation exposure -obo:RBO_00002005 medical therapeutic radiation exposure Therapeutic irradiation Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a cure or mitigation of disease. 0000-0002-5111-7263 planned anthropogenic radiation exposure -obo:RBO_00002006 accidental non-medical anthropogenic radiation exposure Accidental man-made radiation exposure Unplanned exposure to anthropogenic radiation of any type in any environment ; for example radiation from nuclear waste, nuclear industry discharge or weapons. 0000-0002-5111-7263 accidental anthropogenic radiation exposure -obo:RBO_00002008 planned anthropogenic radiation exposure Planned exposure to radiation generated through a device or exposure to a source emitting ionising radiation 0000-0002-5111-7263 planned process|anthropogenic radiation exposure -obo:RBO_00002009 accidental anthropogenic radiation exposure Accidental or incidental exposure to radiation from a man made process or machine. Covers both radiation accidents and routine occupational exposure. 0000-0002-5111-7263 anthropogenic radiation exposure -obo:RBO_00002010 accidental medical anthropogenic radiation exposure Accidental exposure occurring during medical therapy or diagnostics, for example medical radiation accidents or overdoses. 0000-0002-5111-7263 accidental anthropogenic radiation exposure -obo:RBO_00002011 unplanned naturally occurring radiation exposure Incidental exposure to naturally occurring radiation in a natural or anthropogenic environment, such as geographical areas with high background levels of radiation or specific locations such as Uranium mines. 0000-0002-5111-7263 obo:RBO_00002004 TRUE -obo:RBO_00002012 planned naturally occurring radiation exposure Deliberate or knowing exposure to naturally occurring radiation in a natural or anthropogenic environment, such as a radon spa. 0000-0002-5111-7263 obo:RBO_00002004 -obo:RBO_00002013 social and psychosocial study Studies relating to human society and the interrelation of social and educational factors with individual thought and behaviour including mental illness. 0000-0002-5111-7263 radiobiology study type -obo:RBO_00002015 mass media study Studies on the distribution of information or opinion by technological means of communication that reach large numbers of people. 0000-0002-5111-7263 radiobiology study type http://purl.biolontology.org/ontology/CSP/1580-0981 -obo:RBO_00002016 preparedness study Studies on the civil, legal, and political preparedness for accidental or deliberate release of radioactive materials or radiation into the environment. 0000-0002-5111-7263 radiobiology study type -obo:RBO_00002017 clinical study Studies in which research is conducted with human subjects or on material of human origin in which the investigator directly interacts with human subjects, including the dveelopment of new technologies, understanding of the mechanisms of disease, therapy, clinical trials, epidemiology behaviousrand health services research. 0000-0002-5111-7263 radiobiology study type http://purl.bioontology.org/ontology/CSP/4006-0105 -obo:RBO_00002018 legal and governance study Study of the laws, statutes, ordinances, government or international treaty regulations or authoritative guidelines, as well as for legal controversy and court decisions, relating to the regulation of radiation safety, movement and containment of radioactive materials and the consequences for human health or the natural environment of radioactive contamination. 0000-0002-5111-7263 radiobiology study type -obo:RBO_00002019 security and law enforcement study Studies relating to organisations and processes concerned with freedom from or resilience towards potential harm caused by hostile intent or circumstances (for example terrorism and illegal release of radioactive substances or radiation) towards the natural environment or human population, and the enforcement of relevant laws and international treaties. 0000-0002-5111-7263 radiobiology study type -obo:RBO_00002020 cancer study A study whose intention is to discover knowledge concerning the origins, nature diagnosis or therapy for neoplastic disease and cancer. This includes studies in humans, model organisms, the laboratory and in silico. This class includes experimental and epidemiological studies specifically aimed at cancer. 0000-0002-5111-7263 radiobiology study type -obo:RBO_00002021 study modality The specific manner, characteristic, pattern of application, or the employment of any technology, approach or formal procedure to implement the study plan to generate a study type. 0000-0002-5111-7263 obo:PATO_0001236 -obo:RBO_00002022 environmental study Studies of the presence of radiation of any type in the natural or anthropogenic environment and its impact on animals, plants, and microorganisms. This includes studies measuring nuclide transfer in the environment, and interaction with meteorological phenomena. This excludes occupational exposure and the human working environment. 0000-0002-5111-7263 radiobiology study type -obo:RBO_00002023 nuclear industry study Studies concerned with the regulation, monitoring and operation of the nuclear industry. For example nuclear power station and reprocessing plants, isotope purification and manufactore, weapons manufacture and testing. This includes occupation health studies, impact of accidental or deliberate release on the natural or man made environment and impact on organisms specifically affected directly or indirectly by contamination. 0000-0002-5111-7263 radiobiology study type -obo:RBO_00002024 laboratory study Research done in a laboratory. A laboratory study may use special equipment and cells or animals to investigate the effects of an experimental perturbation, discover fundamental molecular mechanisms, assay biological substances, or find out if a drug, procedure, or treatment is likely to be useful in humans. A laboratory investigation is often characterised by a hypothesis and is carried out with controls. 0000-0002-5111-7263 radiobiology study type http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28278 -obo:RBO_00002025 attitudinal study Study of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ethicolegal constructs surrounding radiation and radiation safety and regulation. 0000-0002-5111-7263 social and psychosocial study http://purl.bioontology.org/ontology/CSP/2482-9501 -obo:RBO_00002026 communication study Study concerning exchange or transmission of thoughts, messages, or information between people or between authorities and the general public (for example educational information, risk communication, safety communication) concerning exposure to and use of radiation. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002027 community study A study focussed on a set of people with some shared characteristic. The substance of shared element varies widely, from geography to a situation to interest to lives and values. The term is widely used to evoke sense of collectivity. For example communities collectively exposed to radioactive environmental contamination. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002028 political and psephological study The study of political involvement in radiation and nuclear regulation, military use, and safety as shown by inclusion in political manifestos and messaging by established or informal groups and its impact on voting patterns and democracy. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002029 psychometric study "A study measuring ""psychological"" aspects of a person such as knowledge, skills, abilities, attitudes, or personality using defined scales." 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002030 behavioural study A study of human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002031 sociological study A study dealing with group relationships, patterns of collective behavior, and social organization. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002032 social science and humanities study Studies involving fields of inquiry into human constructs and concerns as opposed to natural processes . These are traditionally the study of literature, philosophy, and religion. Included in this definition are sociological studies, especially those concerned with the social impact of the humanities. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002033 perceptions, expectations and behaviours study Specifically an attitudinal study looking at how perception, for example of risk, and expectations affect behaviour. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002034 holistic approaches to governance study Sociological, attitudinal, ethocolegal and regulatory approaches to governance of radiation and radioactive substance use. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002035 responsible research and innovation study Studies on policy concerning socially and ethically responsible research and innovation 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002036 stakeholder engagement study Studies of the engagement between an organisational entity and those groups or individuals potentially or actually impacted by the actions of that entity over a range of activities and approaches. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002037 risk and health communication study Study concerning the modes, efficacy and response to communication of risk and health impacts of radiation in all aspects. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002038 radiological protection culture study Studies concenring the attitudes to and practices of radiological protection in defined groups of people. For example the nuclear industry of a country or within a specific laboratory. 0000-0002-5111-7263 social and psychosocial study -obo:RBO_00002039 genetic population study Genetic study done at the population level or among population groups, generally to find the cause, incidence or spread of a disease or to see the response to a treatment, nutrition or environment. 0000-0002-5111-7263 epidemiological study http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16160 -obo:RBO_00002040 prospective study A type of study in which participants are enrolled into the study before they develop the disease or outcome in question. 0000-0002-5111-7263 epidemiological study http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C142646 -obo:RBO_00002041 registry study Observational studies which include an organized system that uses observational methods to collect uniform data (clinical and other) prospectively for a population defined by a particular disorder/disease, condition (including susceptibility to a disorder), or exposure (including products, health care services, and/or procedures) and that serves a predetermined scientific, clinical, or policy purpose. Patient registries may be single purpose or on-going data collection programs that address one or more questions. (AHRQ) An observational study that is also considered to be a Patient Registry. 0000-0002-5111-7263 epidemiological study http://purl.obolibrary.org/obo/NCIT_C129000 -obo:RBO_00002042 retrospective study A study looking backwards in time using observations collected predominantly prior to subject selection and enrolment 0000-0002-5111-7263 epidemiological study -obo:RBO_00002043 incidence or prevalence study A study of the number of new cases of a given disease during a given period in a specified population. It also is used for the rate at which new events occur in a defined population. this class also includes PREVALENCE, which refers to all cases in the population at a given time. 0000-0002-5111-7263 epidemiological study -obo:RBO_00002044 situation awareness and decision support study Studies concerning the optimisation of situation awareness through gathering and analysing information, and methodologies for making decisions on that awareness, such as estimating the path of a radioactive fallout with respect to weather and population density and making a decision to evacuate a population. 0000-0002-5111-7263 preparedness study -obo:RBO_00002045 civil protection study A study concerning the protection of the population from unexpected radioactive discharge or contamination, such as a dirty bomb, and civil safetyy coningency plans, such as deployment of emergency services and evacuation. 0000-0002-5111-7263 preparedness study -obo:RBO_00002046 disaster planning study Studies on planning for unexpected natural or man-made radiological catastrophe of substantial extent causing significant property damage or destruction, loss of life or sometimes permanent changes to the natural environment. Broader scope than civil protection as may relate to livestock, food and water shortage, disease outbreak and extensive traumas caused by precipitating or consequential damage. 0000-0002-5111-7263 preparedness study -obo:RBO_00002047 nuclear accident study Studies on plannig for or analysing a nuclear accident with release of airborn or waterborn contamination into the environment. Narrower than Disaster planning study but may be used to qualify an annotation to Disaster planning study if the source of contamination is a nuclear accident. A nuclear accident is not necessarily a disaster. 0000-0002-5111-7263 preparedness study -obo:RBO_00002048 clinical trial study A controlled study designed to assess the safety and efficacy of new drugs, devices, treatments, or preventive measures in humans by comparing two or more interventions or regimens 0000-0002-5111-7263 clinical study http://purl.bioontology.org/ontology/CSP/0690-6917 -obo:RBO_00002049 medical radiological safety study Study of the effects of radiation used in a medical therapeutic or diagnostic context. Inlcudes radiation accidents in this context, excludes occupational exposure for health professionals. 0000-0002-5111-7263 clinical study -obo:RBO_00002050 occupational health study A study concerned with health and safety policy development, implementation and practice in the workplace including investigating accidents at work, and chronic occupational exposure. Includes monitoring compliance with health and safety legislation and study of the promotion and maintenance of physical and mental health in the work environment. 0000-0002-5111-7263 clinical study -obo:RBO_00002051 radiation based diagnostics study Study on the efficacy, outcomes and adverse consequences of exposure to medical diagnostic procedures using internal or external irradiation. 0000-0002-5111-7263 clinical study -obo:RBO_00002052 radiotherapy study Study of the efficacy, outcomes and adverse consequences of exposure to therapeutic use of ionizing and nonionizing radiation including RADIONUCLIDE THERAPY, therapeutic radiation with visible, laser, or ultraviolet light. Includes technical development of protocols and equipment. 0000-0002-5111-7263 clinical study -obo:RBO_00002053 therapeutics study A study involvingdevelopment of agents or procedures intended to produce an effect that is intended to mitigate or stop a pathologic process. 0000-0002-5111-7263 clinical study -obo:RBO_00002054 histopathologic study A study of the macroscopic and microscopic anatomical changes in diseased tissue. 0000-0002-5111-7263 clinical study http://purl.bioontology.org/ontology/CSP/1448-3909 -obo:RBO_00002055 radiation legislation study Study of legal and statutory instruments and legislation designed to regulate the safety, use and transport of radioactive materials, release of such materials into the environment, or external radiation. 0000-0002-5111-7263 legal and governance study -obo:RBO_00002056 regulatory harmonisation study Study of the policy approaches and their implementation concerned with harmonising regulatory guidelines and legislation dealing with radiation and radioactive substances between legislatures, generally internationally. 0000-0002-5111-7263 legal and governance study -obo:RBO_00002057 nuclear proliferation treaty study Study of the development, implementation and monitoring of nuclear non proliferation treaties between states. 0000-0002-5111-7263 legal and governance study -obo:RBO_00002058 bioterrorism study Studies concerning intentional release of organisms (germs), toxic chemicals, or radioactive substances with intent to harm or kill people or the environment, or to inflict panic within a population. 0000-0002-5111-7263 security and law enforcement study http://purl.bioontology.org/ontology/CSP/5000-0002 -obo:RBO_00002059 military defence study Study of strategies and their implementation towards defence against radiation used as a weapon conducted by military powers and institutions. May also include civil defence where the military has a significant operational role, but not disaster preparedness. 0000-0002-5111-7263 security and law enforcement study -obo:RBO_00002060 dna modification study Study of biological processes that involve adding/removing chemical moieties to/from DNA, including methylation, phosphorylation, dephosphorylation, etc. Includes interventional DNA modification. 0000-0002-5111-7263 study modality -obo:RBO_00002061 histone modification study Study of biological processes that involve adding/removing chemical moieties to/from histones, including methylation, acetylation,phosphorylation, dephosphorylation, etc. 0000-0002-5111-7263 study modality -obo:RBO_00002062 interview study Study conducted by means of structured or unstructured interviews of persons of interest. 0000-0002-5111-7263 study modality -obo:RBO_00002063 genetic study A study of genetic variation and the inheritance of a trait or traits within a population or an individual including examination of genetic material for the presence or absence of cytogenetic or molecular genetic abnormalities. 0000-0002-5111-7263 study modality -obo:RBO_00002064 imaging study A radiographic study used to evaluate a specific anatomic location for a specific purpose. This may include the assessment of imaging modalities and the development of new techniques. Includes PET, MRI, CT and related techniques. 0000-0002-5111-7263 study modality -obo:RBO_00002065 mathematical modelling study Study concerned with the construction, analysis, evaluation, refinement etc. of mathematical or statistical models of the properties or behaviour of a set of entities, such as molecules, physiological processes, environmental processes such as nuclide transfer, such that functions are developed to reliably predict the behaviour of those entities. 0000-0002-5111-7263 study modality -obo:RBO_00002066 model organism study A study usually conducted in a laboratory where non human animals are used to model aspects of a disease process or its therapy to provide insights into human biology or pathobiology. 0000-0002-5111-7263 study modality -obo:RBO_00002067 monitoring technologies and metrology study Study concerning the development, use, calibration or standardisation of technologies for the qualitative or quantitative measurement of radiation and radionuclides. 0000-0002-5111-7263 study modality -obo:RBO_00002068 radiochemistry study Study of the chemistry of radioactive materials including radioactive tracer studies of metabolic processes 0000-0002-5111-7263 study modality -obo:RBO_00002069 policy development study Study of the development and implementation of public policy towards issues involving radiation 0000-0002-5111-7263 study modality -obo:RBO_00002070 acoustic radiation study Study of the effects of acoustic radiation on cellular and organismal physiology and the effects of acoustic radiation emitted in response to exposure to ionising radiation. 0000-0002-5111-7263 study modality -obo:RBO_00002071 environmental study_ abiotic_anthropogenic Study of radiation levels and effects in the human built environment. 0000-0002-5111-7263 environmental study -obo:RBO_00002072 natural environment study Study of radiation levels and effects in the natural environment. 0000-0002-5111-7263 environmental study -obo:RBO_00002073 ecological population modelling study The development and use of mathematical models and systems analysis for the description of naturally occurring non-human populations, and applications to measuring the effects of radiological contamination. 0000-0002-5111-7263 environmental study -obo:RBO_00002074 ecotoxicology study The study of environmental contamination with radiation and radioactive substances and the toxic effects on the ecosystem either through chemical toxicity or radiation exposure. 0000-0002-5111-7263 environmental study -obo:RBO_00002075 environmental radon study The study of environmental contamination with radon and the toxic effects on biota including humans. Both natural and anthropogenic environments. Includes radiometrics, safety policies and mitigation technologies. 0000-0002-5111-7263 environmental study -obo:RBO_00002076 radionuclide dispersal modelling study Mathematical modelling of radionuclide transfer and dispersal processes in water, earth or air, either directly or through the mediation of biota. 0000-0002-5111-7263 environmental study -obo:RBO_00002077 naturally occurring radioactive materials study Study of the ocurrence, levels and effects of naturally occurring radioactive materials such as Radon. 0000-0002-5111-7263 environmental study -obo:RBO_00002078 environmental radiation monitoring study Study involving the measurement of radiation levels, or concentration of radionuclides, in the natural or man made environment. Usually in a time series. 0000-0002-5111-7263 environmental study -obo:RBO_00002079 environmental radionuclide transfer study Study concerned with the measurement of transfer of radionuclides to biota from the environment. 0000-0002-5111-7263 environmental study -obo:RBO_00002080 non ionising electromagnetic radiation study Any study concenrd with the prevalence or effects on non-ionising radiations such as UV, acoustic, or RF. 0000-0002-5111-7263 environmental study -obo:RBO_00002081 nuclear installation study Study concerning the safety, regulation, activities and engineering of nuclear installations including power stations, waste processing plant, radionuclide generation and purification plant, and military nuclear establishments. May include occupational health studies if broader than just occupationaal health in scope. 0000-0002-5111-7263 nuclear industry study -obo:RBO_00002082 nuclear waste study Study of the process of generation of nuclear waste, its monitoring, regulation, disposal and inadvertent discharge. 0000-0002-5111-7263 nuclear industry study -obo:RBO_00002083 nuclear engineering study Study of the engineering of nuclear installations such as power plants. 0000-0002-5111-7263 nuclear industry study -obo:RBO_00002084 mining study Study of the process, regulation and monitoring of mines where exposure to naturally occurring radiation presents an occupational hazard for workers or the process itself, for example run off water or spoil, constitutes an environmental hazard. 0000-0002-5111-7263 nuclear industry study -obo:RBO_00002085 cell culture study A study using cells derived from an organism grown in artificial culture medium in a laboratory with the aim of understanding some aspect(s) of cell physiology, genetics or behaviour, generally as part of the testing of an hypothesis but also for diagnostic intent. 0000-0002-5111-7263 laboratory study -obo:RBO_00002086 organ culture study A study using an organ, part of an organ or an organoid culture, derived from an organism and grown in artificial culture medium in a laboratory with the aim of understanding some aspect(s) of cell physiology, genetics or behaviour, generally as part of the testing of an hypothesis but also for diagnostic intent. The system differs from cell culture in the generation or maintenance of multiple cell types with the spatial and functional relationship between them derived from or reflecting the normal organisation in vivo. 0000-0002-5111-7263 laboratory study -obo:RBO_00002087 molecular genetic study Any study involving the manipulation, measurement, or characterisation of DNA or RNA in a cell or organism. 0000-0002-5111-7263 laboratory study -obo:RBO_00002088 molecular structural study Elucidation of the physical structure of a macromolecule, protein, carbohydrate, DNA or RNA, its analysis and manipulation based on structure/function considerations. 0000-0002-5111-7263 laboratory study -obo:RBO_00002089 whole organism study A study using an intact organism, plant, animal, or microorganism 0000-0002-5111-7263 laboratory study -obo:RBO_00002090 bystander effect study Study of the cellular phenomenon which radiation energy is not been directly deposited in cells by transfer of medium, proximity/justaposition, or other means, but results in their behaving as if they had been irradiated. 0000-0002-5111-7263 laboratory study -obo:RBO_00002091 epigenetic study A study of heritable phenotype changes that do not involve alterations in the DNA sequence. This may be in intact organisms or in cells and includes population analysis of epigenetic phenomena and molecular analysis of gene expression and epigenetic modifications of chromatin such as DNA methylation and histone acetylation. 0000-0002-5111-7263 laboratory study -obo:RBO_00002092 mutagenesis study Study of the frequency of induction , nature and consequences of the production of genetic or epigenetic alterations by any technique, including chemicals, radiation, recombination, or other molecular biology methods. 0000-0002-5111-7263 laboratory study -obo:RBO_00002093 attitudinal study of nuclear industry risk perception Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or regulation of the nuclear industries. 0000-0002-5111-7263 attitudinal study -obo:RBO_00002094 attitudinal study towards ionising radiation in the environment Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ecological integrity towards natural or anthropogenic ionising radiation in the environment. 0000-0002-5111-7263 attitudinal study -obo:RBO_00002095 attitudinal study towards non-ionising radiation in the environment Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ecological integrity towards natural or anthropogenic non-ionising radiation in the natural environment. 0000-0002-5111-7263 attitudinal study -obo:RBO_00002096 attitudinal study towards medical radiation procedures Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety and efficacy in a clinical context where radiation is used for diagnostic or therapeutic procedures.. 0000-0002-5111-7263 attitudinal study -obo:RBO_00002097 attitudinal study towards radiation in the occupational environment Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety towards natural or anthropogenic non-ionising radiation in the occupational environment. 0000-0002-5111-7263 attitudinal study -obo:RBO_00002098 authority trust study Study of social and individual trust in the position and activities of legal or other competent advisory or regulatory authorities. 0000-0002-5111-7263 attitudinal study -obo:RBO_00002099 risk communication study Study on the modality, efficacy and responses to communcation of information or advice to populations or individuals, on the safety and risks of exposure to ionising radiation in any context. 0000-0002-5111-7263 communication study -obo:RBO_00002100 public communication study Study on the modality, efficacy and responses to communication of information or advice to populations or individuals, on the safety and risks of exposure to ionising radiation in any context. 0000-0002-5111-7263 communication study -obo:RBO_00002101 public education study Study on the modality, efficacy and responses to communication of information or advice to populations on any aspect of radiation, conceived of as an educational programme, and including a wider scope than just safety and risk. For example basic nuclear physics, emergency action advice. 0000-0002-5111-7263 communication study -obo:RBO_00002102 social affairs and community health study Study involving attitudes, health status, social organisation of defined communities identified by common characteristics such as occupation type, geography, gender identity, with respect to radiation. 0000-0002-5111-7263 community study -obo:RBO_00002103 community planning study Studies involving creation and assessment of plans for the future physical arrangement, well being, efficiency and condition of a community. It may have the goals of improving health, promoting efficiency in the provision of services and resources on a comprehensive basis for a whole community. In the context of radiation this may be concerned with community planning for dealing with mitigation measures for local NORM, or organised community-wide continegency measures for nuclear accident or recovery from such. 0000-0002-5111-7263 community study -obo:RBO_00002104 community survey study Study concerned with eliciting information in a structured way concerning issues of interest from members of a community defined by common characteristics, for example occupation, geographical location, personal history or gender. 0000-0002-5111-7263 community study -obo:RBO_00002105 individual behaviour study A study concerned with human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology at the level of slected individuals. May be carried out by observation or as individual responses to a questioannaire or interview in the case of humans where the person records their own assessment of their behaviour. 0000-0002-5111-7263 behavioural study -obo:RBO_00002106 population behaviour study A study concerned with human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology within substantial populations of individuals. Likely to be carried out by mass observation or indirect inference. 0000-0002-5111-7263 behavioural study -obo:RBO_00002107 radiotherapeutic modelling study Mathematical modelling for theraputic regime optimisation and for optimal tumor response, for example modelling spatiotemporal dynamics of tumor and blood volume fraction, and predicting response to radiation therapy. Also studies for beam modelling and multiimaging techniques. 0000-0002-5111-7263 therapeutics study -obo:RBO_00002108 building materials radiological safety study Study of the radiolonuclide components and emissions from building materials 0000-0002-5111-7263 environmental study_ abiotic_anthropogenic -obo:RBO_00002109 building radiological safety study Studies on radiological safety within buildings. Primary purpose os for buildings not specifially designed to hold radioactive materials but anaylyis and mitigation of risks from radioactive exposure from the local environment or materials. 0000-0002-5111-7263 environmental study_ abiotic_anthropogenic -obo:RBO_00002110 meteorology study Study of the weather and atmospheric dynamics mainly with respect to dissemination of radionuclides. 0000-0002-5111-7263 natural environment study -obo:RBO_00002111 environmental study_abiotic Study of non-living objects in the environment, such as soils or rocks. 0000-0002-5111-7263 natural environment study -obo:RBO_00002112 environmental study_biota ( non human) Study of non-human biota in the natural environment. 0000-0002-5111-7263 natural environment study -obo:RBO_00002113 environmental study_panbiota (all) Study which may include human and non-human biota in the environment. 0000-0002-5111-7263 natural environment study -obo:RBO_00002114 wireless communication radiation study Study of the measurement, effects and regulation of wireless communication signals, for example mobile phone radiation and microwave communication. 0000-0002-5111-7263 non ionising electromagnetic radiation study -obo:RBO_00002115 gamma ray photon Photons having energies that are greater than tens of thousands of electron volts (eV). Britannica.com The sample was irradiated with Cs-137 gamma ray photons. CHEBI:30212 -obo:RBO_00002116 x-ray photon A photon with energies from about 100 eV (electron volts) to 1 MeV (million electron volts). Britannica.com The sample was irradiated with x-ray photons. CHEBI:30212 -obo:RBO_00002117 irradiation An energy transfer process in which energy in the form of particles or waves is transferred from one entity to another Jack Miller Irradiation of the sample was with x-ray photons. 0000-0003-1741-8297 http://purl.obolibrary.org/obo/ENVO_01001852 obo:RBO_0002000 TRUE -http://purl.obolibrary.org/obo/OBI_0302889 obo:RBO_00002117 -obo:RBO_00002118 radioactive decay A process involving the emission of energy from an atomic nucleus resulting in change in the character of the nucleus obo:RBO_00015006 -obo:RBO_00002119 unplanned irradiation Irradiation that is not the result of a planned process obo:RBO_00002000 -obo:RBO_00002120 unplanned anthropogenic irradiation Unplanned irradiation that is of anthropogenic origin obo:RBO_00002119 -obo:RBO_00002121 unplanned naturally occurring radiation exposure Unplanned irradiation that is non-anthropogenic in origin obo:RBO_00002119 -obo:RBO_00002122 environmental radiation monitoring Environmental monitoring that includes continual assay for radiation dose or quality. http://purl.obolibrary.org/obo/ENVO_02500041 -obo:RBO_00002123 natural environment monitoring Monitoring within an environment which was not man-made. http://purl.obolibrary.org/obo/ENVO_02500041 -obo:RBO_00002124 anthropogenic environment monitoring Monitoring within a man-made or constructed environment http://purl.obolibrary.org/obo/ENVO_02500041 -obo:RBO_00002125 anthropogenic environment radiation monitoring Monitoring for radiation dose or quality within a man-made or constructed environment such as a building or a vehicle. obo:RBO_00002122|obo:RBO_00002124 -obo:RBO_00002126 natural environment radiation monitoring Monitoring for radiation dose or quality within a natural environment. obo:RBO_00002122|obo:RBO_00002123 -obo:RBO_00015000 radiation That energy which is transferred in space and time as part of the process of radiation (ENVO:01001023). obo:BFO_0000040 -obo:RBO_00015001 neutral particle radiation Uncharged particles with kinetic energy imparted by natural or artificial means (such as by a particle accelerator) obo:RBO_00015000 -obo:RBO_00015002 nanodosimetry assay An assay of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers See H.H. Rossi, Microdosimetry and Radiobiology, Radiation Protection Dosimetry, Volume 13, Issue 1-4, 1 December 1985, Pages 259�265, https://doi.org/10.1093/rpd/13.1-4.259 and Gustavo A. Santa Cruz,Microdosimetry: Principles and applications,Reports of Practical Oncology & Radiotherapy,Volume 21, Issue 2,2016,Pages 135-139,ISSN 1507-1367,https://doi.org/10.1016/j.rpor.2014.10.006. Usually a track structure assay at nm scale obo:RBO_00005041 -obo:RBO_00015003 microdosimetry assay An assay of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 micrometers See H.H. Rossi, Microdosimetry and Radiobiology, Radiation Protection Dosimetry, Volume 13, Issue 1-4, 1 December 1985, Pages 259�265, https://doi.org/10.1093/rpd/13.1-4.259 and Gustavo A. Santa Cruz,Microdosimetry: Principles and applications,Reports of Practical Oncology & Radiotherapy,Volume 21, Issue 2,2016,Pages 135-139,ISSN 1507-1367,https://doi.org/10.1016/j.rpor.2014.10.006. Usually a track structure assay at micrometre scale obo:RBO_00005041 -obo:RBO_00015004 alpha decay Nuclear decay in which an alpha particle is emitted. https://goldbook.iupac.org/terms/view/A00005 obo:RBO_00002118 alpha-decay http://purl.obolibrary.org/obo/REX_0000017 -obo:RBO_00015005 beta decay Radioactive decay in which a beta particle is emitted or in which orbital electron capture occurs. http://goldbook.iupac.org/B00572.html obo:RBO_00002118 beta-decay http://purl.obolibrary.org/obo/REX_0000007 -obo:RBO_00015006 subatomic process Processes in which electrons or components of the atomic nucleus are participants. BFO:0000015 -obo:RBO_00015007 nanodosimetric measurement datum Measurement of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers obo:RBO_010016 -obo:RBO_00015008 specific energy measurement datum In microdosimetry the specific energy, z, is the energy deposited by radiation ( in one or more deposition events) in a specified micrometric (or smaller) site divided my the mass of the site. Measured in Gy. obo:RBO_010016 -obo:RBO_00015009 particle track The path of a particle in matter, delineated by sites where the particle deposits energy. obo:IAO_0000030 -obo:RBO_00015010 nanodosimetry A pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers. PATO:0001241 -obo:RBO_00015011 particle track structure The complete set of spatial coordinates of energy deposition events along a particle track in matter PATO:0001236 -obo:RBO_00015012 ionization cluster A group of ionization events closely related in time and space, occurring in a specified target volume and originating from a single primary ionizing particle. UBERON:0000000 -obo:RBO_00015013 microdosimetric measurement datum Measurement of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 micrometers. obo:RBO_010016 -obo:RBO_00015014 micrometric volume "A volume of matter characterised by linear dimensions of the order of 0.5- 10's of microns, referred to as the ""site"" in microdosimetry." PATO:0001241 -obo:RBO_00015015 control specimen role A control specimen role of a biotic or abiotic sample or individual describes a specimen by its purpose, and therefore treatment, within a planned experimental process that tests hypotheses by isolating variables as dictated by the scientific method in order to make a conclusion about the effect of such variables. The quality of control inhering in the sample role exists as a result of the historical treatment of the sample. In a controlled experiment, two or more virtually identical experiments are conducted, but the factor being tested is varied in only one of them. This serves to isolate any causal phenomena. A control may have been subject to treatments during the experiment that might alter its state or behaviour and is therefore distinguishable from the sample as initial input into the experiment. However such treatments should in all cases but that of the variable under scrutiny, be the same as the experimental sample. OBI:0000112 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C64355 -obo:RBO_00015016 approximate sham irradiation Sham irradiation in which an identical irradiation protocol (with the exception of the administration of the radiation exposure) is not followed in every respect. Use approximate sham irradiation when at least one aspect of the irradiation (with the exception of the administration of the radiation exposure) is not followed precisely. For example, Not placing an organism or sample in a beam line for the same length of time as the irradiated organism(s) or sample(s) were left in the beam. obo:RBO_00005015 -obo:RBO_00015017 internal radiation exposure Exposure to an inhaled, ingested, injected or implanted source of radiation of any origin as part of a planned or accidental process. Experimental internal radiation exposure of rodents to radon gas through inhalation. obo:RBO_00002000 -obo:RBO_00015018 external radiation exposure Exposure to an external source of radiation of any origin or type. Mice exposed to external radiation from a Sr source. https://orcid.org/0000-0002-5111-7263 obo:RBO_00002000 -obo:RBO_00015019 complete sham irradiation Sham irradiation in which an identical irradiation protocol is followed in every respect, with the exception of the administration of the radiation exposure. Use complete sham irradiation when all steps of an irradiation protocol are followed for sham control group (with the exception of administration of the radiation exposure). obo:RBO_00005015 -obo:RBO_00015020 internal experimental radiation exposure Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally by the ingestion, inhalation or implantation of a source of radiation. https://orcid.org/0000-0002-5111-7263 Research subjects participating in a clinical trial using an internally implanted radiation source have an internal experimental radiation exposure obo:RBO_00002008|obo:RBO_00015017 -obo:RBO_00015021 energy deposition event The direct or indirect transfer of energy from radiation to a medium through ionisation or excitation of the atoms of the medium. obo:RBO_00015006 -obo:RBO_00015022 track formation http://purl.obolibrary.org/obo/BFO_0000015 -obo:RBO_00015023 mixed irradiation study A mixed irradiation study typically involves exposing a sample or system to a combination of different types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00000082 -obo:RBO_00015024 mixed ion and photon irradiation study A mixed ion and photon irradiation study typically involves exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015023 -obo:RBO_00015025 mixed ion and photon simultaneous irradiation study A mixed ion and photon simultaneous irradiation study typically involves simultaneously exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015024 -obo:RBO_00015026 mixed ion and photon sequential irradiation study A mixed ion and photon sequential irradiation study typically involves sequentially exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015024 -obo:RBO_00015027 multiple ion irradiation study multiple ion mixed irradiation study A multiple ion irradiation study typically involves exposing a sample or system to a combination of different types of charged particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015023 -obo:RBO_00015028 multiple ion simultaneous irradiation study A multiple ion simultaneous irradiation study typically involves simultaneously exposing a sample or system to a combination of ions. This could include exposure to various forms of particle radiation, for example ion beams. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015027 -obo:RBO_00015029 multiple ion sequential irradiation study A multiple ion sequential irradiation study involves exposing a sample or system to a combination of different ions. This could include exposure to various forms of particle radiation such as ion beams. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015027 +Ontology ID Label editor preferred term has curation status alternative term definition definition source example of usage editor note term editor curator note ontology term requester term tracker item Logical Type Class Type Parent exact synonym Has Subset Member of superset db xref deprecated +ID LABEL A editor preferred term AI has curation status A alternative term SPLIT=| A IAO:0000115 A definition source SPLIT=| A example of usage SPLIT=| A editor note SPLIT=| A term editor SPLIT=| A rdfs:comment SPLIT=| A ontology term requester A term tracker item TYPE CLASS_TYPE C % SPLIT=| A oboInOwl:hasExactSynonym C 'has subset some % SPLIT=| C 'part of' superset % A http://www.geneontology.org/formats/oboInOwl#hasDbXref A owl:deprecated +obo:RBO_00000001 ionizing radiation categorized by source Ionizing radiation classified by the material entity which generates or emits it. obo:RBO_00000116 +obo:RBO_00000002 space radiation Radiation originating outside the Earth's atmosphere. http://purl.obolibrary.org/obo/RBO_00000001 +obo:RBO_00000003 ground radiation Radiation produced on Earth or on another planetary body by natural or artificial means. One of the principal sources of ground radiation is radon gas. http://purl.obolibrary.org/obo/RBO_00000001 +obo:RBO_00000004 tissue equivalent material "Material presenting, when irradiated, interaction properties similar to those of soft tissue." ICRP glossary (http://icrpaedia.org/Tissue_equivalent_material) BFO:0000040 +obo:RBO_00000010 light ion "An atomic nucleus, fully stripped of its orbital electrons, and containing 2, 3, 4, 5, or 6 protons." charged particle|atomic nucleus +obo:RBO_00000011 active dosimeter "A radiation measuring device which records dose at the time of detection, with data available in real time" Ionization chambers and silicon solid state detectors can be used as active dosimeters. obo:RBO_00000115 +obo:RBO_00000012 passive dosimeter A radiation measuring device which integrates the amount of radiation to which it is exposed. Passive detectors are interrogated at a later time to determine the dose. Thermoluminescent dosimeters and plastic nuclear track detectors are passive detectors. obo:RBO_00000115 +obo:RBO_00000013 background ionizing radiation "The amount of ionizing radiation to which a member of the population on Earth is exposed from natural sources, such as terrestrial radiation from naturally-occurring radionuclides in the soil, cosmic radiation originating in outer space, and naturally-occurring ra" obo:RBO_00015000 +obo:RBO_00000014 effective dose "The sum of the equivalent doses to all organs in the body, each adjusted to account for the sensitivity of the organ to radiation. Effective dose is calculated for the whole body. Effective dose is expressed in millisieverts (mSv)." The effective dose was calculated to be 300 mSv. radiation dose +obo:RBO_00000015 mixed radiation "The process of exposing the same sample to more than one type and/or energy of radiation, in sequence or simultaneously." The samples were exposed to a mixed radiation field consisting of several ions at different energies. particle accelerator radiation mixed field|mixed radiation field +obo:RBO_00000016 radiation environment Radiation classified by where the exposure to the radiation is occurring. ENVO:01000254 +obo:RBO_00000017 earth surface That part of the Earth exposed to the Earth atmosphere. radiation environment +obo:RBO_00000018 earth atmosphere The region between the Earth's surface and an altitude of approximately 100 km radiation environment +obo:RBO_00000019 low earth orbit LEO The region of outer space between the Earth's atmosphere and the innermost Earth radiation belt ENVO:01000637 LEO +obo:RBO_00000020 beyond low earth orbit BLEO That part of outer space beyond the Earth's radiation belts. ENVO:01000637 BLEO +obo:RBO_00000021 fractionated radiation exposure fractionated A radiation dose administered in two or more exposures at specified time intervals obo:RBO_00002000 +obo:RBO_00000022 millirad A unit of absorbed dose equal to 1/1000 of a rad UO:1000135 mrad +obo:RBO_00000023 equivalent dose The product of the mean absorbed dose in an organ or tissue and the radiation weighting factor (w_R )of the radiation type of interest The equivalent dose was calculated to be 300 mSv. radiation dose +obo:RBO_00000024 dose fraction The absorbed radiation dose administered in a single one of a series comprising a fractionated radiation exposure The total dose was administered in five dose fractions. radiation dose +obo:RBO_00000026 cosmic radiation "Penetrating ionizing radiation, both particulate and electromagnetic, that originates in outer space" space radiation +obo:RBO_00000027 galactic cosmic radiation Galactic cosmic radiation consists of high-energy charged particles originating from outside the solar system Galactic cosmic radiation is one of the principal sources of radiation dose outside low-earth orbit cosmic radiation +obo:RBO_00000028 solar cosmic radiation Solar cosmic radiation is high-energy charged particles that originate from the sun. Solar cosmic radiation contributes to the radiation dose to humans in space. cosmic radiation +obo:RBO_00000029 dose rate The measurement datum representing a dose to an organism or object per unit time. The dose rate was 0.5 mGy/min. IAO:0000109 +obo:RBO_00000033 spacecraft "Vehicles, crewed or uncrewed, which are designed to orbit about the Earth or another celestial body or be placed into a trajectory to another celestial body or location in space." "NASA Thesaurus, 1988" The Apollo spacecraft took 24 astronauts to the Moon between 1968 and 1972. OBI:0000968 CHEBI:33250 +obo:RBO_00000044 spacecraft module a self-contained unit of a spacecraft spacecraft +obo:RBO_00000045 international space station module ISS module A self-contained unit of the International Space Station. The experiment was conducted in the International Space Station module Columbus|The experiment was conducted on the Russian module of the ISS. spacecraft module +obo:RBO_00000046 space station A spacecraft capable of supporting a human crew in orbit for an extended period of time. It lacks major propulsion or landing systems. Stations must have docking ports to allow other spacecraft to dock to transfer crew and supplies. Wikipedia "Mir was a space station that operated in low Earth orbit from 1986 to 2001, operated by the Soviet Union and later by Russia." spacecraft +obo:RBO_00000047 particle accelerator beamline "The path leading from a particle accelerator to an experimental station used in experiments in particle physics, materials science, chemistry, and molecular biology, or in irradiation tests or to produce isotopes." Wikipedia The HIMAC accelerator has a beamline dedicated for radiation biology experiments. obo:RBO_00000121 +obo:RBO_00000049 particle accelerator radiation Radiation produced by a particle accelerator. ground radiation +obo:RBO_00000050 nuclear reactor radiation Radiation produced by a nuclear reactor. ground radiation +obo:RBO_00000051 cesium-137 gamma radiation Cs-137 gamma High energy photons emitted during nuclear decay of the Cesium-137 isotope. obo:RBO_00000120 Cs-137 +obo:RBO_00000052 cobalt-60 gamma radiation Co-60 gamma High energy photons emitted during nuclear decay of the Cobalt-60 isotope. obo:RBO_00000120 Co-60 +obo:RBO_00000058 cobalt-57 gamma radiation Co-57 gamma High energy photons emitted during nuclear decay of the Cobalt-57 isotope. obo:RBO_00000120 Co-57 obo:RBO_00000060 +obo:RBO_00000060 radionuclide "Isotopes that exhibit radioactivity and undergo radioactive decay. (From Grant & Hackh's Chemical Dictionary, 5th ed & McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)" http://purl.bioontology.org/ontology/MESH/D011868 CHEBI:33250 +obo:RBO_00000061 actinide "A series of radioactive elements from ACTINIUM, atomic number 89, to and including LAWRENCIUM, atomic number 103" http://purl.bioontology.org/ontology/MESH/D008671 radionuclide +obo:RBO_00000062 actinium "A trivalent radioactive element and the prototypical member of the actinide family. It has the atomic symbol Ac, and atomic number 89. Its principal isotope is 227 and it decays primarily by beta-emission." http://purl.bioontology.org/ontology/MESH/D000186 actinide +obo:RBO_00000063 americium "A completely man-made radioactive actinide with atomic symbol Am, and atomic number 95. Its valence can range from +3 to +6. Because of its nonmagnetic ground state, it is an excellent superconductor. It is also used in bone mineral analysis and as a radiation source for radiotherapy" http://purl.bioontology.org/ontology/MESH/D000576 actinide +obo:RBO_00000064 californium "A man-made radioactive actinide with atomic symbol Cf, atomic number 98, and atomic weight 251. Its valence can be +2 or +3. Californium has medical use as a radiation source for radiotherapy" http://purl.bioontology.org/ontology/MESH/D002142 actinide +obo:RBO_00000065 neptunium "A radioactive element of the actinide metals family. It has the atomic symbol Np, and atomic number 93." http://purl.bioontology.org/ontology/MESH/D009405 actinide +obo:RBO_00000066 plutonium "A naturally radioactive element of the actinide metals series. It has the atomic symbol Pu, and atomic number 94. Plutonium is used as a nuclear fuel, to produce radioisotopes for research, in radionuclide batteries for pacemakers, and as the agent of fission in nuclear weapons." http://purl.bioontology.org/ontology/MESH/D011005 actinide +obo:RBO_00000067 thorium "A radioactive element of the actinide series of metals. It has an atomic symbol Th, atomic number 90, and atomic weight 232.04. It is used as fuel in nuclear reactors to produce fissionable uranium isotopes. Because of its radioopacity, various thorium compounds are used to facilitate visualization in roentgenography." http://purl.bioontology.org/ontology/MESH/D013910 actinide +obo:RBO_00000068 uranium "A radioactive element of the actinide series of metals. It has an atomic symbol U, atomic number 92, and atomic weight 238.03. U-235 is used as the fissionable fuel in nuclear weapons and as fuel in nuclear power reactors." http://purl.bioontology.org/ontology/MESH/D014501 actinide +obo:RBO_00000069 ultraviolet radiation UV UV radiation Electromagnetic radiation with photon energies approximately 3-120 eV. High energy UV radiation can be ioinizing. http://son.nasa.gov/tass/content/electrospectrum.htm obo:RBO_00000114 +obo:RBO_00000070 radioprotectant radioprotector A substance present at the time of irradiation that mitigates or prevents the biological effects of irradiation. "Richard T. Hoppe, Theodore Locke Phillips, Mack Roach, Leibel and Phillips Textbook of Radiation Oncology (Third Edition), W.B. Saunders, (2010), ISBN 9781416058977, https://doi.org/10.1016/B978-1-4160-5897-7.00093-7." E.G. amifostine. CHEBI:24432 +obo:RBO_00000071 radionuclide chelator Radionuclide chelators are small organic molecules or in some cases larger peptides that chemically sequester the radionuclide ion by forming a complex that determines the thermodynamic stability and kinetic inertness of the radionuclide. CHEBI:24432 +obo:RBO_00000072 co-carcinogen A co-carcinogen is generally a chemical that promotes the effects of a carcinogen in the production of cancer. In some circumstances exposure to radiation or physical trauma is considered to be co-carcinogenic. CHEBI:24432 +obo:RBO_00000073 radiation response modifier "Radiation response modifiers are agents that alter tumor or normal tissue response to radiation, such as radiation sensitizers and radiation protectors. " "Citrin DE, Mitchell JB. Altering the response to radiation: sensitizers and protectors. Semin Oncol. 2014 Dec;41(6):848-59. doi: 10.1053/j.seminoncol.2014.09.013. Epub 2014 Oct 7. PMID: 25499642; PMCID: PMC4270009." CHEBI:24432 +obo:RBO_00000074 peptide radiation response modifier Radiation response modifiers that are peptides. "Shaghaghi, Zahra et al. “Potential utility of peptides against damage induced by ionizing radiation.” Future oncology (2021): doi/10.2217/fon-2020-0577" radiation response modifier +obo:RBO_00000075 small molecule radiation response modifier Radiation response modifiers that are small molecules. radiation response modifier +obo:RBO_00000076 nuclear industry worker "A person employed or otherwise working in commercial activities where nuclear materials are created, handled or disposed and at risk of occupational radiation exposure. Excludes health workers." "Nezahat Hunter, Richard G.E. Haylock, Michael Gillies, Wei Zhang; Extended analysis of solid cancer incidence among the Nuclear Industry Workers in the UK: 1955–2011. Radiat Res 2022; doi: https://doi.org/10.1667/RADE-20-00269.1" occupational role +obo:RBO_00000077 astronaut occupational role +obo:RBO_00000078 military occupational role +obo:RBO_00000079 medical professional occupational role +obo:RBO_00000080 dentist medical professional +obo:RBO_00000081 radiologist medical professional +obo:RBO_00000082 radiobiology study type radiobiology investigation "The theme or modality of an experimental, theoretical, critical or summative study involving radiation, radioactive materials including their impacts on orgnisms and society." OBI:0000011 +obo:RBO_00000083 epidemiological study "An epidemiological study is the study (scientific, systematic, and data-driven) of the distribution (frequency, pattern) and determinants (causes, risk factors) of health-related states and events (not just diseases) in specified populations (neighborhood, school, city, state, country, global)" https://www.cdc.gov/csels/dsepd/ss1978/lesson1/section1.html radiobiology study type +obo:RBO_00000084 environmental study A study of the impact of radiation on the composition of or processes within the natural or anthropogenic environment. radiobiology study type A owl:deprecated +obo:RBO_00000085 lifespan study A study who endpoint is the lifespan of the organism under investifgation. radiobiology study type +obo:RBO_00000086 carcinogenesis study "A study of the effect of agents including radiation, seperately or together, on the incidence or type of neoplasia or pre-neoplasia." radiobiology study type +obo:RBO_00000087 tissue damage study A study in which the structural or processual damage to normal tissue caused by radiation is assessed. Often by histopathology or molecular profiling. radiobiology study type +obo:RBO_00000088 dna damage and repair study A study of the mechanism or effects of radiation on dna damage and its repair. radiobiology study type +obo:RBO_00000089 physiological study A study of the effects of internal or external radiation on cellular or organismal physiology. radiobiology study type +obo:RBO_00000090 anatomical study "A study of the effects of radiation on the integrity, composition and quality of adult, fetal or embryonic anatomical structures." radiobiology study type +obo:RBO_00000091 external exposure study A study of the effects of external irradiation on an organism. radiobiology study type +obo:RBO_00000092 internal contamination study "A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems." radiobiology study type +obo:RBO_00000093 mixed exposure route study A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. radiobiology study type +obo:RBO_00000094 acute external exposure study A study of the effects of external irradiation on an organism where the most of the dose is given in a single or small number of fractions closely in time. external exposure study +obo:RBO_00000095 chronic external exposure study A study of the effects of external irradiation on an organism where the dose is given over a protracted time period either continuously or in many fractions. Often these are lose dose studies. external exposure study +obo:RBO_00000096 chronic internal contamination study "A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. The dose is delivered over a long period of time, often continuously and generlly at low dose. For example long term Radon exposure by inhalation." internal contamination study +obo:RBO_00000097 acute internal contamination study "A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. Most of the dose is given over a short period of time and is generally unfractionated, such as in brachytherapy." internal contamination study +obo:RBO_00000098 acute mixed exposure route study A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. Acute exposure involves usually a single exposure over a short period of time with no fractionation. mixed exposure route study +obo:RBO_00000099 chronic mixed exposure route study A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. Chronic exposure involves usually a continuous or highly fractionated exposure over a long period of time. mixed exposure route study +obo:RBO_00000100 gene expression study A study of the effects of radiation on gene expression. radiobiology study type +obo:RBO_00000101 proteomics study A study of the effects of radiation on the proteome or individual proteins. radiobiology study type +obo:RBO_00000102 marker discovery study "A study that aims at the discovery of protein, RNA or other molecular entities or modifcations that can act as reliable surrogates for the prediction or measurement of the effects of radiation or the response of the organism to radiation." radiobiology study type +obo:RBO_00000103 therapeutics study "A study that aims at the discovery, development or assessment of efficacy of therapeutic agents or processes designed to mitigate or cure the effects of radiation exposure." radiobiology study type A owl:deprecated +obo:RBO_00000104 survival study "A study that uses survival as an endpoint. Generally applicable to animal studies rather than human studies which would use the ""lifespan"" measure (RBO:00000085)" radiobiology study type +obo:RBO_00000105 metabolomics study A study of the effects of radiation on the metabolome or individual metabolites. radiobiology study type +obo:RBO_00000106 nuclear accident study A study of the contributing factors consequences and prevention of nuclear accidents radiobiology study type A owl:deprecated +obo:RBO_00000107 toxicity study A study of the toxicity of chemical or biological agents on cells or whole organisms. radiobiology study type +obo:RBO_00000108 endocrine study A study of the effects of radiation on the endocrine system or of endocrine hormones on the effects of radiation. obo:RBO_00000089 +obo:RBO_00000109 offspring study transgenerational study A study of the effects of radiation on the offspring of an irradiated animal or plant. radiobiology study type +obo:RBO_00000110 biokinetics study pharmacokinetics A study of the distribution and metabolism orf drugs or biologicals used for therapeutic purposes. radiobiology study type +obo:RBO_00000111 occupational role "A set of behaviours that have some socially agreed upon function and for which there is an accepted code of norms. This may refer to a role within an organisation or within society as a whole. For example a Profession” can be defined as a cluster of occupational roles, or roles in which the incumbents perform certain functions valued in the organisation or society." BFO:0000023 +obo:RBO_00000112 high linear energy transfer radiation "Neutrons or charged particles, such as protons or alpha particles that produce ionizing events densely spaced on a molecular scale (e.g., >10 keV-micron^[-1]." NCRP https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf obo:RBO_00000116 NCIT:C17052 +obo:RBO_00000113 low linear energy transfer radiation X and gamma rays or light charged particles such as electrons that produce sparse ionizing events far apart on a molecular scale. NCRP https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf obo:RBO_00000116 low LET|low-LET NCIT:C17052 +obo:RBO_00000114 ionizing electromagnetic radiation Electromagnetic radiation having sufficient energy to remove one or more electrons from an atom obo:RBO_00000116 +obo:RBO_00000115 radiation dosimeter device radiation dosimeter radiation dosimeter A device that is used to measure the amount of ionizing radiation exposure or absorption. NCIT OBI:0000968 dosimeter NCIT:C150121 +obo:RBO_00000116 ionizing radiation ionising radiation Particle or electromagnetic radiation with sufficient energy to liberate one or more electrons from an atom. obo:RBO_00015000 ionising radiation NCIT:C17052 +obo:RBO_00000117 charged particle radiation charged particle charged particle Charged particles with kinetic energy imparted by natural or artificial means (such as by a particle accelerator) obo:RBO_00015000 NCIT:C18982 +obo:RBO_00000118 risk estimate OBI:0001909 NCIT:C19015 +obo:RBO_00000119 lifetime risk estimate obo:RBO_00000118 NCIT:C19662 +obo:RBO_00000120 gamma radiation electromagnetic radiation with photon energies greater than approximately 100 keV http://son.nasa.gov/tass/content/electrospectrum.htm obo:RBO_00000114 NCIT:C44386 +obo:RBO_00000121 particle accelerator A device used to impart kinetic energy to subatomic particles by means of electric and magnetic fields OBI:0000968|obo:RBO_00005014 NCIT:C94854 +obo:RBO_00000122 nuclear reactor A device in which nuclear fission may be initiated and controlled in a self-sustaining chain reaction to generate energy or produce useful radiation. OBI:0000968|obo:RBO_00005014 MESH:D009688 +obo:RBO_00000123 biological process BFO:0000015 GO:0008150 owl:deprecated +obo:RBO_00000124 cellular process obo:RBO_00000123 GO:0009987 owl:deprecated +obo:RBO_00005001 heavy ion radiation "Atomic nuclei, with atomic number 2 or greater and kinetic energy imparted by natural or artificial means" obo:RBO_00000117 +obo:RBO_00005002 light ion radiation "Atomic nuclei, variously defined as having atomic number 2, 3, 4, 5 or 6 and kinetic energy imparted by natural or artificial means" obo:RBO_00000117 +obo:RBO_00005003 charged particle A particle with a positive or negative electric charge BFO:0000040 +obo:RBO_00005009 space flight space flight spaceflight Activity carried out by crewed or robotic vehicles outside the Earth's atmmosphere. ENVO:03000010 Space flight +obo:RBO_010000 as low as reasonably achievable ALARA ALARA "A principle of radiation protection philosophy that requires that exposures to ionizing radiation be kept as low as reasonably achievable, economic and social factors being taken into account. The protection from radiation exposure is ALARA when the expen" NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) One of the measures to ensure ALARA is to minimize the time spent working around radioactive materials. Jack Miller obo:IAO_0000104 ALARA +obo:RBO_010001 radiation attenuation The reduction of radiation intensity upon passage of radiation through matter NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) "Attenuation in concrete or leadshielding is a common method of radiation protection on Earth, but is impractical in space due to mass constraints." Jack Miller BFO:0000182 +obo:RBO_010002 biodosimetry "Use of a biological response as an indicator of a dose of an effective agent (e.g., the extent of decline in peripheral blood lymphocytes of humans exposed to ionizing radiation can be used as an indicator of the absorbed dose to the whole body from that" NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Biodosimetry was used to measure the exposure of some victims of the Chernobyl nuclear accident. Jack Miller CHMO:0002796 +obo:RBO_010003 bystander effect "The term used to describe the effects on cells in proximity to irradiated cells, but through which radiation has not passed. In experimental radiation biology, the bystander effect can be investigated by targeting individual cells, or by using doses low enough that the probability for a given cell to be hit by a particle is less than one." NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The bystander effect can be studied by identifying cells that were traversed by a charged particle. Jack Miller obo:RBO_00005074 +obo:RBO_010006 delta ray delta electron "Highly energetic electrons produced during inelastic collisions between ionizing radiation and atomic electrons. In a small proportion of collisions, the ejected electron receives a considerable amount of energy (i.e., >1,000 eV), allowing it to travel a" NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Delta ray energies increase with the velocity of the incident particle. Jack Miller charged particle radiation delta electron +obo:RBO_010007 dose equivalent "The product of the absorbed dose (D) at a point and the quality factor (Q) at that point for the radiation type (i.e., H = DQ). The unit of H is J-kg^[-1] with the special name sievert (Sv)" NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The average annual dose equivalent for crew members on the ISS is approximately 300 mSv. Jack Miller radiation dose +obo:RBO_010008 excess lifetime risk of cancer The increased risk from induced cancer due to exposure when the effects over an entire lifetime are accounted for. Individuals who would have died of cancer anyway but die early because of exposure are not included NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Jack Miller obo:RBO_00000119 +obo:RBO_010009 fast neutron Neutrons of energies above a few hundred kiloelectron volts (keV) NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The sample was irradiated with fast neutrons. Jack Miller obo:RBO_00015001 +obo:RBO_010010 fluence "The number of particles or photons per unit of cross-sectional area perpendicular to the direction of the particle (units of m^2 or cm^2) (i.e., particles-m^[-2] or particles-cm^[-2])." NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The value of the fluence was approximately 1 particle per cm2. Jack Miller IAO:0000109 +obo:RBO_010011 flux "The quotient of dN by dt, where dN is the increment of the particle number in the time interval dt. The unit for flux is reciprocal second (s^[-1].)" NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) The flux of cosmic ray muons per cm2 at the surface of the Earth is approximately 1.0. Jack Miller IAO:0000109 +obo:RBO_010012 heavy ion "An atomic nucleus, fully stripped of its orbital electrons, containing 2 or more protons. Nuclei containing between 2 protons (helium) and 6 protons (carbon) are sometimes referred to as light ions." In RBO--needs def from NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Jack Miller CHEBI:33252|obo:RBO_00005003 +obo:RBO_010013 linear energy transfer LET The energy deposited by an ionizing charged particle or photon in any medium per unit path length. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Biological effects are a function of LET. Jack Miller IAO:0000109 LET +obo:RBO_010014 organ dose The mean absorbed radiation dose in a specified tissue or organ of the human body. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Radiation protection standards take into account organ dose as well as whole body dose. Jack Miller radiation dose +obo:RBO_010015 quality factor Dimensionless factor developed for purposes of radiation protection and assessing health risks in general terms that accounts for the relative biological effectiveness of different radiations in producing stochastic effects and is used to relate absorbed NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Neutrons have a high quality factor compared to photons. Jack Miller OBI:0001909 +obo:RBO_010016 radiation dose "A measurement datum of the quantity of radiation absorbed by a substance or organism. The term ""radiation dose"" may for example refer to absorbed dose, organ dose, dose equivalent or equivalent dose, depending upon context and weighting factor(s)." "The samples received a dose of 1 Gy. (The use of the gray unit implies that ""dose"" refers to a measured quantity, typically absorbed dose or organ dose.)|The samples received a dose of 1 Sv. (The use of the sievert unit implies that ""dose"" refers to a der" Jack Miller OBI:0000984 +obo:RBO_010017 radiation quality Is a quality of radiation that reflects the fluence spectrum of charged and neutral particles within the material or medium where dose is being deposited. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) and see https://melodi-online.eu/wp-content/uploads/2021/04/02-What-is-radiation-quality-Goodhead.pdf "Radiation quality is often expressed in terms of the linear energy transfer of the ionising particles that deliver the absorbed dose. Rossi, Harald H. Specification of Radiation Quality. Radiation Research, vol. 10, no. 5, Radiation Research Society, 1959, pp. 522 31, https://doi.org/10.2307/3570787. But this is an over simplification." Jack Miller PATO:0001018 TRUE +obo:RBO_010018 radiation weighting factor A factor used to allow for differences in the biological effectiveness between different radiations when calculating equivalent dose (H_T) (see equivalent dose). These factors are independent of the tissue or organ irradiated. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Radiation weighting factors may change as more data on biological effects are obtained. Jack Miller OBI:0001909 +obo:RBO_010019 relative biological effectiveness RBE "Factor used to compare the biological effectiveness of absorbed doses from different types of ionizing radiation, determined experimentally. RBE is the ratio of the absorbed dose of a reference radiation to the absorbed dose of the radiation in question r" NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Neutrons have been found to have a higher RBE than electrons. Jack Miller IAO:0000109 RBE +obo:RBO_010020 tissue equivalence Denotes a substance with absorbing and scattering properties for a given radiation that sufficiently match those of a particular biological tissue. NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) Tissue equivalent materials can be used to study radiation effects at depth in the human body. Jack Miller PATO:0001018 +obo:RBO_00005010 absorbed radiation dose The amount of energy from any type of ionizing radiation deposited in a specified mass of any medium. Jack Miller obo:RBO_010016 +obo:RBO_00005011 absorbed radiation dose rate The amount of energy from any type of ionizing radiation deposited in a specified mass of any medium per unit time. Jack Miller obo:RBO_00000029 +obo:RBO_00005012 ionizing radiation energy The kinetic energy carried by a particle or photon of ionizing radiation. Jack Miller obo:RBO_00000116 +obo:RBO_00005013 x-ray radiation x-ray x-ray Electromagnetic radiation with photon energies approximately between 0.1 and 120 keV. The upper end of the x-ray spectrum overlaps with the lower end of the gamma ray spectrum. http://son.nasa.gov/tass/content/electrospectrum.htm Jack Miller obo:RBO_00000114 +obo:RBO_00005014 radiation source A material entity which emits radiation Jack Miller material entity +obo:RBO_00005015 sham irradiation sham irradiation sham "Sham irradiation refers to a procedure in which participants or subjects in an experiment are exposed to simulated radiation, mimicking precisely the conditions of actual irradiation. The purpose of using sham irradiation is to create a control group that experiences the non-specific effects of the experimental setup, while excluding the specific effects associated with radiation exposure." Jack Miller obo:OBI_0000272 +obo:RBO_00005016 radiation fractionation protocol fractionation protocol fractionation protocol A protocol for administering a total radiation dose in two or more increments separated by a specified time interval Jack Miller obo:IAO_0000104 +obo:RBO_00005017 cis-lunar space cis-lunar space The region of space between the Earth and the Moon Jack Miller obo:RBO_00000016 +obo:RBO_00005018 lunar orbit lunar orbit "A region of space defined by a regular, repeating path of a specified object about Earth's moon" Jack Miller obo:RBO_00000016 +obo:RBO_00005019 lunar surface lunar surface The area of the lunar landmass exposed to space Jack Miller obo:RBO_00000016 +obo:RBO_00005020 cis-mars space cis-Mars space The region of space between the Earth and Mars Jack Miller obo:RBO_00000016 +obo:RBO_00005021 mars orbit Mars orbit "A region of space defined by a regular, repeating path of a specified object about Mars" Jack Miller obo:RBO_00000016 +obo:RBO_00005022 mars surface Mars surface The area of the Mars landmass exposed to the Martian atmosphere Jack Miller obo:RBO_00000016 +obo:RBO_00005023 interplanetary space interplanetary space The region of space in the Solar System between planets Jack Miller obo:RBO_00000016 +obo:RBO_00005024 planet surface planet surface The outermost solid or liquid area of a planet Jack Miller obo:RBO_00000016 +obo:RBO_00005025 non-irradiated non-irradiated "An organism or material entity kept unexposed to radiation, for purposes of comparison to a similar organism or material entity that has been exposed to radiation" Jack Miller PATO:0001241 +obo:RBO_00005026 ground analog study ground analog experiment ground analog "A study at a ground facility designed so as to replicate one or more conditions in space (e.g. radiation, microgravity, isolation)" Jack Miller obo:RBO_00000082 +obo:RBO_00005027 ground control study ground control ground control "An study at a ground facility designed so as to replicate conditions in space (e.g. radiation, microgravity, isolation) with the exception of one condition, so as to ascertain the effects of that condition on an organism or instrument" Jack Miller obo:RBO_00000082 +obo:RBO_00005028 irradiation protocol irradiation protocol A protocol for administering radiation to a sample Jack Miller OBI:0000272 +obo:RBO_00005029 radiation fraction radiation fraction fraction One of the series of individual doses administered to a sample in a fractionated irradiation. Jack Miller dose fraction +obo:RBO_00005030 radiation fraction interval radiation fraction interval Time between fractions in a fractionated irradiation. Jack Miller dose rate +obo:RBO_00005031 high altitude high altitude "The region of the atmosphere above 8000 feet above sea level. Altitudes above 12000 feet are sometimes referred to as very high altitude, and above 18000 feet as extremely high altitude." https://www.medicinenet.com/high_altitude/definition.htm Jack Miller OBI:0002983 +obo:RBO_00005032 sham-irradiated sham A quality of a biotic or abiotic sample or individual which is part of an experiment that tests the effects of radiation on organisms or materials by isolating variables as dictated by the scientific method in order to make a conclusion about the effect of such variables. In sham irradiation the precise treatment of the sample must be identical to that of the experimental samples and should be made explicit in the description of the method. "The class should be used in cases where it is clear that the control sample was treated in precisely the same way as the experimental samples or sham irradiation is specified. It is therefore a more restricted quality definition than ""non-irradiated"". It is likely to be used more often with external radiation exposure or exposure to a beam, and with a biological rather than abiotic sample." Jack Miller non-irradiated +obo:RBO_00005033 parabolic flight aircraft parabolic flight Vomit Comet An aircraft which flies a series of parabolic arcs to simulate micrgravity. Jack Miller ENVO:01001488 +obo:RBO_00005034 high altitude research aircraft An aircraft which flies at altitudes greater than commercial aircraft altitudes for research purposes. Jack Miller ENVO:01001488 +obo:RBO_00005035 uncrewed aerial vehicle UAV UAV "An research aircraft designed to operate without crew members, either autonomously or under control from a ground station" Jack Miller ENVO:01001488 +obo:RBO_00005036 highly charged energetic nucleus HZE HZE|highly charged energetic nuclei Fully ionized atomic nucleus with 2 or more protons and energies in excess of tens of MeV per nucleon Jack Miller CHEBI:36347 +obo:RBO_00005037 adaptive radiation response study adaptive A study of a response to radiation conditioned by prior administration of radiation of a different type and/or at a different dose or dose rate Jack Miller obo:RBO_00000082 +obo:RBO_00005038 average fractionated dose rate The total dose administered in a series of radiation fractions divided by the elapsed time between the beginning of the first exposure fraction and the end of the last exposure fraction Jack Miller dose rate +obo:RBO_00005039 gamma irradiator A device which exposes samples to gamma radiation. Jack Miller radiation source +obo:RBO_00005040 particle charge charge The electric charge of a particle used in an irradiation Jack Miller UO:0000219 +obo:RBO_00005041 radiation dosimetry The measurement of the amount of radiation taken up by a sample. Jack Miller dosimetry +obo:RBO_00005042 microbeam "A microbeam is a narrow beam of radiation, of micrometer or sub-micrometer dimensions. Together with integrated imaging techniques, microbeams allow precisely defined quantities of damage to be introduced at precisely defined locations." Wikipedia Jack Miller particle accelerator +UO:0000127 IAO:0000003 +obo:RBO_00005066 miligray per second mGy/sec mGy/sec A derived absorbed dose unit which is equal to one milligray absorbed per second UO:0000129 UO:0010065 TRUE +obo:RBO_00005067 indirect cellular response to stimulus Indirect cellular response to stimulus "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus which acts on another cell and not on the responding cell. The process begins with detection of the stimulus by a cell and ends with a change in state or activity of a different cell" Paul Schofield "This could be used to describe a tissue response to immune stimulation, so for example an IL2 response of endothelial cells in response to lymphocytes stimulated by pathogen." GO:0051716 +obo:RBO_00005068 indirect cellular response to radiation "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of radiation acting on another cell and not on the responding cell. The process begins with detection of radiation by a cell or cells and ends with a change in state or activity of a different cell or cells." Paul Schofield "The most obvious example is the bystander effect ( Carmel Mothersill, Andrej Rusin, Cristian Fernandez-Palomo & Colin Seymour (2018) History of bystander effects research 1905-present; what is in a name?, International Journal of Radiation Biology, 94:8, 696-707, DOI: 10.1080/09553002.2017.1398436) where a naive cell behaves as if it has been irradiated because of its communication with an irradiated cell. It may also be used to describe the abscopal effect. Note that abscopal effects have been noted for ionising and non-ionising ( RF) radiation, eg. L?ffler MW. et al. . A Non-interventional Clinical Trial Assessing Immune Responses After Radiofrequency Ablation of Liver Metastases From Colorectal Cancer. Front Immunol. 2019 Nov 19;10:2526. doi: 10.3389/fimmu.2019.02526. PMID: 31803175; PMCID: PMC6877671" obo:RBO_00005067 +obo:RBO_00005069 indirect cellular response to ionising radiation "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to ionising radiation which acts on another cell and not on the responding cell. The process begins with detection of the ionising radiation by one cell or cells and ends with a change in state or activity of a different cell or cells." Paul Schofield "Directly describes the bystander effect (Carmel Mothersill, Andrej Rusin, Cristian Fernandez-Palomo & Colin Seymour (2018) History of bystander effects research 1905-present; what is in a name?, International Journal of Radiation Biology, 94:8, 696-707, DOI: 10.1080/09553002.2017.1398436) but can alo sbe used to describe phenomena related to the abscopal effect, manifest in whole organisms where irradiation of one part of the organism causes changes in another un-irradiated component." obo:RBO_00005068 +obo:RBO_00005070 ionizing radiation device A device for exposing materials or biological organisms to ionizing radiation for research or therapeutic purposes. radiation source +obo:RBO_00005071 high-altitude balloon "High-altitude balloons are crewed or uncrewed balloons, usually filled with helium or hydrogen, that are released into the stratosphere, generally attaining between 18 and 37 km (11 and 23 mi; 59,000 and 121,000 ft) above sea level." Wikipedia Jack Miller aircraft +obo:RBO_00005072 space flight spaceflight Travel beyond the Earth's atmosphere Jack Miller PATO:0002062 +obo:RBO_00005074 non-targeted effects of ionising radiation non-targeted effects of ionising radiation NTE|non-targeted effects "Non-targeted effects of ionising radiation are characterised by cellular responses that occur in cells in which energy from ionizing radiation has not been deposited. The distinct classes of non-targeted effects include Genomic Instability, and Bystander effect which latter includes Abscopal effects and Bystander-mediated adaptive response. These can also arise non-clonally in the progeny of irradiated somatic or germ cells, resulting in radiation-induced genomic instability and transgenerational genomic instability respectively. (Kadhim M, Salomaa S, Wright E, et al. Non-targeted effects of ionising radiation--implications for low dose risk. Mutat Res. 2013;752(2):84-98. doi:10.1016/j.mrrev.2012.12.001)" Paul Schofield ORCID: 0000-0002-5111-7263 obo:RBO_00005069 +obo:RBO_00002000 radiation exposure Irradiation The process by which an entity is exposed to electromagnetic or acoustic radiation radiation energy internally or externally. 0000-0002-5111-7263 energy transfer process +obo:RBO_00002001 accidental radiation exposure Accidental irradiation Unplanned exposure to radiation of any type in any environment or otherwise planned process. 0000-0002-5111-7263 radiation exposure +obo:RBO_00002007 anthropogenic radiation exposure Exposure to human generated radiation "Exposure to ionising radiation created by a man-made machine or exposure to a fixed source. For example a cobalt source, an X ray machine, an acceleratororf a nucler weapon." 0000-0002-5111-7263 radiation exposure +obo:RBO_00002002 planned radiation exposure Planned irradiation "Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally." 0000-0002-5111-7263 anthropogenic radiation exposure|planned process +obo:RBO_00002003 medical diagnostic radiation exposure Diagnostic irradiation "Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a diagnosis of disease." 0000-0002-5111-7263 planned anthropogenic radiation exposure +obo:RBO_00002004 exposure to naturally ocurring radioactive material Environmental irradiation Exposure to naturally occurring radiation (NORM) of any type in any environment . 0000-0002-5111-7263 radiation exposure +obo:RBO_00002005 medical therapeutic radiation exposure Therapeutic irradiation "Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a cure or mitigation of disease." 0000-0002-5111-7263 planned anthropogenic radiation exposure +obo:RBO_00002006 accidental non-medical anthropogenic radiation exposure Accidental man-made radiation exposure "Unplanned exposure to anthropogenic radiation of any type in any environment ; for example radiation from nuclear waste, nuclear industry discharge or weapons." 0000-0002-5111-7263 accidental anthropogenic radiation exposure +obo:RBO_00002008 planned anthropogenic radiation exposure Planned exposure to radiation generated through a device or exposure to a source emitting ionising radiation 0000-0002-5111-7263 OBI:0000011|anthropogenic radiation exposure +obo:RBO_00002009 accidental anthropogenic radiation exposure Accidental or incidental exposure to radiation from a man made process or machine. Covers both radiation accidents and routine occupational exposure. 0000-0002-5111-7263 anthropogenic radiation exposure +obo:RBO_00002010 accidental medical anthropogenic radiation exposure "Accidental exposure occurring during medical therapy or diagnostics, for example medical radiation accidents or overdoses." 0000-0002-5111-7263 accidental anthropogenic radiation exposure +obo:RBO_00002011 unplanned naturally occurring radiation exposure "Incidental exposure to naturally occurring radiation in a natural or anthropogenic environment, such as geographical areas with high background levels of radiation or specific locations such as Uranium mines." 0000-0002-5111-7263 obo:RBO_00002004 TRUE +obo:RBO_00002012 planned naturally occurring radiation exposure "Deliberate or knowing exposure to naturally occurring radiation in a natural or anthropogenic environment, such as a radon spa." 0000-0002-5111-7263 obo:RBO_00002004 +obo:RBO_00002013 social and psychosocial study Studies relating to human society and the interrelation of social and educational factors with individual thought and behaviour including mental illness. 0000-0002-5111-7263 radiobiology study type +obo:RBO_00002015 mass media study Studies on the distribution of information or opinion by technological means of communication that reach large numbers of people. 0000-0002-5111-7263 radiobiology study type http://purl.biolontology.org/ontology/CSP/1580-0981 +obo:RBO_00002016 preparedness study "Studies on the civil, legal, and political preparedness for accidental or deliberate release of radioactive materials or radiation into the environment." 0000-0002-5111-7263 radiobiology study type +obo:RBO_00002017 clinical study "Studies in which research is conducted with human subjects or on material of human origin in which the investigator directly interacts with human subjects, including the dveelopment of new technologies, understanding of the mechanisms of disease, therapy, clinical trials, epidemiology behaviousrand health services research." 0000-0002-5111-7263 radiobiology study type http://purl.bioontology.org/ontology/CSP/4006-0105 +obo:RBO_00002018 legal and governance study "Study of the laws, statutes, ordinances, government or international treaty regulations or authoritative guidelines, as well as for legal controversy and court decisions, relating to the regulation of radiation safety, movement and containment of radioactive materials and the consequences for human health or the natural environment of radioactive contamination." 0000-0002-5111-7263 radiobiology study type +obo:RBO_00002019 security and law enforcement study "Studies relating to organisations and processes concerned with freedom from or resilience towards potential harm caused by hostile intent or circumstances (for example terrorism and illegal release of radioactive substances or radiation) towards the natural environment or human population, and the enforcement of relevant laws and international treaties." 0000-0002-5111-7263 radiobiology study type +obo:RBO_00002020 cancer study "A study whose intention is to discover knowledge concerning the origins, nature diagnosis or therapy for neoplastic disease and cancer. This includes studies in humans, model organisms, the laboratory and in silico. This class includes experimental and epidemiological studies specifically aimed at cancer." 0000-0002-5111-7263 radiobiology study type +obo:RBO_00002021 study modality "The specific manner, characteristic, pattern of application, or the employment of any technology, approach or formal procedure to implement the study plan to generate a study type." 0000-0002-5111-7263 obo:PATO_0001236 +obo:RBO_00002022 environmental study "Studies of the presence of radiation of any type in the natural or anthropogenic environment and its impact on animals, plants, and microorganisms. This includes studies measuring nuclide transfer in the environment, and interaction with meteorological phenomena. This excludes occupational exposure and the human working environment." 0000-0002-5111-7263 radiobiology study type +obo:RBO_00002023 nuclear industry study "Studies concerned with the regulation, monitoring and operation of the nuclear industry. For example nuclear power station and reprocessing plants, isotope purification and manufactore, weapons manufacture and testing. This includes occupation health studies, impact of accidental or deliberate release on the natural or man made environment and impact on organisms specifically affected directly or indirectly by contamination." 0000-0002-5111-7263 radiobiology study type +obo:RBO_00002024 laboratory study "Research done in a laboratory. A laboratory study may use special equipment and cells or animals to investigate the effects of an experimental perturbation, discover fundamental molecular mechanisms, assay biological substances, or find out if a drug, procedure, or treatment is likely to be useful in humans. A laboratory investigation is often characterised by a hypothesis and is carried out with controls." 0000-0002-5111-7263 radiobiology study type http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28278 +obo:RBO_00002025 attitudinal study "Study of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ethicolegal constructs surrounding radiation and radiation safety and regulation." 0000-0002-5111-7263 social and psychosocial study http://purl.bioontology.org/ontology/CSP/2482-9501 +obo:RBO_00002026 communication study "Study concerning exchange or transmission of thoughts, messages, or information between people or between authorities and the general public (for example educational information, risk communication, safety communication) concerning exposure to and use of radiation." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002027 community study "A study focussed on a set of people with some shared characteristic. The substance of shared element varies widely, from geography to a situation to interest to lives and values. The term is widely used to evoke sense of collectivity. For example communities collectively exposed to radioactive environmental contamination." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002028 political and psephological study "The study of political involvement in radiation and nuclear regulation, military use, and safety as shown by inclusion in political manifestos and messaging by established or informal groups and its impact on voting patterns and democracy." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002029 psychometric study "A study measuring ""psychological"" aspects of a person such as knowledge, skills, abilities, attitudes, or personality using defined scales." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002030 behavioural study "A study of human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002031 sociological study "A study dealing with group relationships, patterns of collective behavior, and social organization." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002032 social science and humanities study "Studies involving fields of inquiry into human constructs and concerns as opposed to natural processes . These are traditionally the study of literature, philosophy, and religion. Included in this definition are sociological studies, especially those concerned with the social impact of the humanities." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002033 "perceptions, expectations and behaviours study" "Specifically an attitudinal study looking at how perception, for example of risk, and expectations affect behaviour." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002034 holistic approaches to governance study "Sociological, attitudinal, ethocolegal and regulatory approaches to governance of radiation and radioactive substance use." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002035 responsible research and innovation study Studies on policy concerning socially and ethically responsible research and innovation 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002036 stakeholder engagement study Studies of the engagement between an organisational entity and those groups or individuals potentially or actually impacted by the actions of that entity over a range of activities and approaches. 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002037 risk and health communication study "Study concerning the modes, efficacy and response to communication of risk and health impacts of radiation in all aspects." 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002038 radiological protection culture study Studies concenring the attitudes to and practices of radiological protection in defined groups of people. For example the nuclear industry of a country or within a specific laboratory. 0000-0002-5111-7263 social and psychosocial study +obo:RBO_00002039 genetic population study "Genetic study done at the population level or among population groups, generally to find the cause, incidence or spread of a disease or to see the response to a treatment, nutrition or environment." 0000-0002-5111-7263 epidemiological study http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16160 +obo:RBO_00002040 prospective study A type of study in which participants are enrolled into the study before they develop the disease or outcome in question. 0000-0002-5111-7263 epidemiological study http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C142646 +obo:RBO_00002041 registry study "Observational studies which include an organized system that uses observational methods to collect uniform data (clinical and other) prospectively for a population defined by a particular disorder/disease, condition (including susceptibility to a disorder), or exposure (including products, health care services, and/or procedures) and that serves a predetermined scientific, clinical, or policy purpose. Patient registries may be single purpose or on-going data collection programs that address one or more questions. (AHRQ) An observational study that is also considered to be a Patient Registry." 0000-0002-5111-7263 epidemiological study http://purl.obolibrary.org/obo/NCIT_C129000 +obo:RBO_00002042 retrospective study A study looking backwards in time using observations collected predominantly prior to subject selection and enrolment 0000-0002-5111-7263 epidemiological study +obo:RBO_00002043 incidence or prevalence study "A study of the number of new cases of a given disease during a given period in a specified population. It also is used for the rate at which new events occur in a defined population. this class also includes PREVALENCE, which refers to all cases in the population at a given time." 0000-0002-5111-7263 epidemiological study +obo:RBO_00002044 situation awareness and decision support study "Studies concerning the optimisation of situation awareness through gathering and analysing information, and methodologies for making decisions on that awareness, such as estimating the path of a radioactive fallout with respect to weather and population density and making a decision to evacuate a population." 0000-0002-5111-7263 preparedness study +obo:RBO_00002045 civil protection study "A study concerning the protection of the population from unexpected radioactive discharge or contamination, such as a dirty bomb, and civil safetyy coningency plans, such as deployment of emergency services and evacuation." 0000-0002-5111-7263 preparedness study +obo:RBO_00002046 disaster planning study "Studies on planning for unexpected natural or man-made radiological catastrophe of substantial extent causing significant property damage or destruction, loss of life or sometimes permanent changes to the natural environment. Broader scope than civil protection as may relate to livestock, food and water shortage, disease outbreak and extensive traumas caused by precipitating or consequential damage." 0000-0002-5111-7263 preparedness study +obo:RBO_00002047 nuclear accident study Studies on plannig for or analysing a nuclear accident with release of airborn or waterborn contamination into the environment. Narrower than Disaster planning study but may be used to qualify an annotation to Disaster planning study if the source of contamination is a nuclear accident. A nuclear accident is not necessarily a disaster. 0000-0002-5111-7263 preparedness study +obo:RBO_00002048 clinical trial study "A controlled study designed to assess the safety and efficacy of new drugs, devices, treatments, or preventive measures in humans by comparing two or more interventions or regimens" 0000-0002-5111-7263 clinical study http://purl.bioontology.org/ontology/CSP/0690-6917 +obo:RBO_00002049 medical radiological safety study "Study of the effects of radiation used in a medical therapeutic or diagnostic context. Inlcudes radiation accidents in this context, excludes occupational exposure for health professionals." 0000-0002-5111-7263 clinical study +obo:RBO_00002050 occupational health study "A study concerned with health and safety policy development, implementation and practice in the workplace including investigating accidents at work, and chronic occupational exposure. Includes monitoring compliance with health and safety legislation and study of the promotion and maintenance of physical and mental health in the work environment." 0000-0002-5111-7263 clinical study +obo:RBO_00002051 radiation based diagnostics study "Study on the efficacy, outcomes and adverse consequences of exposure to medical diagnostic procedures using internal or external irradiation." 0000-0002-5111-7263 clinical study +obo:RBO_00002052 radiotherapy study "Study of the efficacy, outcomes and adverse consequences of exposure to therapeutic use of ionizing and nonionizing radiation including RADIONUCLIDE THERAPY, therapeutic radiation with visible, laser, or ultraviolet light. Includes technical development of protocols and equipment." 0000-0002-5111-7263 clinical study +obo:RBO_00002053 therapeutics study A study involvingdevelopment of agents or procedures intended to produce an effect that is intended to mitigate or stop a pathologic process. 0000-0002-5111-7263 clinical study +obo:RBO_00002054 histopathologic study A study of the macroscopic and microscopic anatomical changes in diseased tissue. 0000-0002-5111-7263 clinical study http://purl.bioontology.org/ontology/CSP/1448-3909 +obo:RBO_00002055 radiation legislation study "Study of legal and statutory instruments and legislation designed to regulate the safety, use and transport of radioactive materials, release of such materials into the environment, or external radiation." 0000-0002-5111-7263 legal and governance study +obo:RBO_00002056 regulatory harmonisation study "Study of the policy approaches and their implementation concerned with harmonising regulatory guidelines and legislation dealing with radiation and radioactive substances between legislatures, generally internationally." 0000-0002-5111-7263 legal and governance study +obo:RBO_00002057 nuclear proliferation treaty study "Study of the development, implementation and monitoring of nuclear non proliferation treaties between states." 0000-0002-5111-7263 legal and governance study +obo:RBO_00002058 bioterrorism study "Studies concerning intentional release of organisms (germs), toxic chemicals, or radioactive substances with intent to harm or kill people or the environment, or to inflict panic within a population." 0000-0002-5111-7263 security and law enforcement study http://purl.bioontology.org/ontology/CSP/5000-0002 +obo:RBO_00002059 military defence study "Study of strategies and their implementation towards defence against radiation used as a weapon conducted by military powers and institutions. May also include civil defence where the military has a significant operational role, but not disaster preparedness." 0000-0002-5111-7263 security and law enforcement study +obo:RBO_00002060 dna modification study "Study of biological processes that involve adding/removing chemical moieties to/from DNA, including methylation, phosphorylation, dephosphorylation, etc. Includes interventional DNA modification." 0000-0002-5111-7263 study modality +obo:RBO_00002061 histone modification study "Study of biological processes that involve adding/removing chemical moieties to/from histones, including methylation, acetylation,phosphorylation, dephosphorylation, etc." 0000-0002-5111-7263 study modality +obo:RBO_00002062 interview study Study conducted by means of structured or unstructured interviews of persons of interest. 0000-0002-5111-7263 study modality +obo:RBO_00002063 genetic study A study of genetic variation and the inheritance of a trait or traits within a population or an individual including examination of genetic material for the presence or absence of cytogenetic or molecular genetic abnormalities. 0000-0002-5111-7263 study modality +obo:RBO_00002064 imaging study "A radiographic study used to evaluate a specific anatomic location for a specific purpose. This may include the assessment of imaging modalities and the development of new techniques. Includes PET, MRI, CT and related techniques." 0000-0002-5111-7263 study modality +obo:RBO_00002065 mathematical modelling study "Study concerned with the construction, analysis, evaluation, refinement etc. of mathematical or statistical models of the properties or behaviour of a set of entities, such as molecules, physiological processes, environmental processes such as nuclide transfer, such that functions are developed to reliably predict the behaviour of those entities." 0000-0002-5111-7263 study modality +obo:RBO_00002066 model organism study A study usually conducted in a laboratory where non human animals are used to model aspects of a disease process or its therapy to provide insights into human biology or pathobiology. 0000-0002-5111-7263 study modality +obo:RBO_00002067 monitoring technologies and metrology study "Study concerning the development, use, calibration or standardisation of technologies for the qualitative or quantitative measurement of radiation and radionuclides." 0000-0002-5111-7263 study modality +obo:RBO_00002068 radiochemistry study Study of the chemistry of radioactive materials including radioactive tracer studies of metabolic processes 0000-0002-5111-7263 study modality +obo:RBO_00002069 policy development study Study of the development and implementation of public policy towards issues involving radiation 0000-0002-5111-7263 study modality +obo:RBO_00002070 acoustic radiation study Study of the effects of acoustic radiation on cellular and organismal physiology and the effects of acoustic radiation emitted in response to exposure to ionising radiation. 0000-0002-5111-7263 study modality +obo:RBO_00002071 environmental study_ abiotic_anthropogenic Study of radiation levels and effects in the human built environment. 0000-0002-5111-7263 environmental study +obo:RBO_00002072 natural environment study Study of radiation levels and effects in the natural environment. 0000-0002-5111-7263 environmental study +obo:RBO_00002073 ecological population modelling study "The development and use of mathematical models and systems analysis for the description of naturally occurring non-human populations, and applications to measuring the effects of radiological contamination." 0000-0002-5111-7263 environmental study +obo:RBO_00002074 ecotoxicology study The study of environmental contamination with radiation and radioactive substances and the toxic effects on the ecosystem either through chemical toxicity or radiation exposure. 0000-0002-5111-7263 environmental study +obo:RBO_00002075 environmental radon study "The study of environmental contamination with radon and the toxic effects on biota including humans. Both natural and anthropogenic environments. Includes radiometrics, safety policies and mitigation technologies." 0000-0002-5111-7263 environmental study +obo:RBO_00002076 radionuclide dispersal modelling study "Mathematical modelling of radionuclide transfer and dispersal processes in water, earth or air, either directly or through the mediation of biota." 0000-0002-5111-7263 environmental study +obo:RBO_00002077 naturally occurring radioactive materials study "Study of the ocurrence, levels and effects of naturally occurring radioactive materials such as Radon." 0000-0002-5111-7263 environmental study +obo:RBO_00002078 environmental radiation monitoring study "Study involving the measurement of radiation levels, or concentration of radionuclides, in the natural or man made environment. Usually in a time series." 0000-0002-5111-7263 environmental study +obo:RBO_00002079 environmental radionuclide transfer study Study concerned with the measurement of transfer of radionuclides to biota from the environment. 0000-0002-5111-7263 environmental study +obo:RBO_00002080 non ionising electromagnetic radiation study "Any study concenrd with the prevalence or effects on non-ionising radiations such as UV, acoustic, or RF." 0000-0002-5111-7263 environmental study +obo:RBO_00002081 nuclear installation study "Study concerning the safety, regulation, activities and engineering of nuclear installations including power stations, waste processing plant, radionuclide generation and purification plant, and military nuclear establishments. May include occupational health studies if broader than just occupationaal health in scope." 0000-0002-5111-7263 nuclear industry study +obo:RBO_00002082 nuclear waste study "Study of the process of generation of nuclear waste, its monitoring, regulation, disposal and inadvertent discharge." 0000-0002-5111-7263 nuclear industry study +obo:RBO_00002083 nuclear engineering study Study of the engineering of nuclear installations such as power plants. 0000-0002-5111-7263 nuclear industry study +obo:RBO_00002084 mining study "Study of the process, regulation and monitoring of mines where exposure to naturally occurring radiation presents an occupational hazard for workers or the process itself, for example run off water or spoil, constitutes an environmental hazard." 0000-0002-5111-7263 nuclear industry study +obo:RBO_00002085 cell culture study "A study using cells derived from an organism grown in artificial culture medium in a laboratory with the aim of understanding some aspect(s) of cell physiology, genetics or behaviour, generally as part of the testing of an hypothesis but also for diagnostic intent." 0000-0002-5111-7263 laboratory study +obo:RBO_00002086 organ culture study "A study using an organ, part of an organ or an organoid culture, derived from an organism and grown in artificial culture medium in a laboratory with the aim of understanding some aspect(s) of cell physiology, genetics or behaviour, generally as part of the testing of an hypothesis but also for diagnostic intent. The system differs from cell culture in the generation or maintenance of multiple cell types with the spatial and functional relationship between them derived from or reflecting the normal organisation in vivo." 0000-0002-5111-7263 laboratory study +obo:RBO_00002087 molecular genetic study "Any study involving the manipulation, measurement, or characterisation of DNA or RNA in a cell or organism." 0000-0002-5111-7263 laboratory study +obo:RBO_00002088 molecular structural study "Elucidation of the physical structure of a macromolecule, protein, carbohydrate, DNA or RNA, its analysis and manipulation based on structure/function considerations." 0000-0002-5111-7263 laboratory study +obo:RBO_00002089 whole organism study "A study using an intact organism, plant, animal, or microorganism" 0000-0002-5111-7263 laboratory study +obo:RBO_00002090 bystander effect study "Study of the cellular phenomenon which radiation energy is not been directly deposited in cells by transfer of medium, proximity/justaposition, or other means, but results in their behaving as if they had been irradiated." 0000-0002-5111-7263 laboratory study +obo:RBO_00002091 epigenetic study A study of heritable phenotype changes that do not involve alterations in the DNA sequence. This may be in intact organisms or in cells and includes population analysis of epigenetic phenomena and molecular analysis of gene expression and epigenetic modifications of chromatin such as DNA methylation and histone acetylation. 0000-0002-5111-7263 laboratory study +obo:RBO_00002092 mutagenesis study "Study of the frequency of induction , nature and consequences of the production of genetic or epigenetic alterations by any technique, including chemicals, radiation, recombination, or other molecular biology methods." 0000-0002-5111-7263 laboratory study +obo:RBO_00002093 attitudinal study of nuclear industry risk perception "Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or regulation of the nuclear industries." 0000-0002-5111-7263 attitudinal study +obo:RBO_00002094 attitudinal study towards ionising radiation in the environment "Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ecological integrity towards natural or anthropogenic ionising radiation in the environment." 0000-0002-5111-7263 attitudinal study +obo:RBO_00002095 attitudinal study towards non-ionising radiation in the environment "Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ecological integrity towards natural or anthropogenic non-ionising radiation in the natural environment." 0000-0002-5111-7263 attitudinal study +obo:RBO_00002096 attitudinal study towards medical radiation procedures "Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety and efficacy in a clinical context where radiation is used for diagnostic or therapeutic procedures.." 0000-0002-5111-7263 attitudinal study +obo:RBO_00002097 attitudinal study towards radiation in the occupational environment "Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety towards natural or anthropogenic non-ionising radiation in the occupational environment." 0000-0002-5111-7263 attitudinal study +obo:RBO_00002098 authority trust study Study of social and individual trust in the position and activities of legal or other competent advisory or regulatory authorities. 0000-0002-5111-7263 attitudinal study +obo:RBO_00002099 risk communication study "Study on the modality, efficacy and responses to communcation of information or advice to populations or individuals, on the safety and risks of exposure to ionising radiation in any context." 0000-0002-5111-7263 communication study +obo:RBO_00002100 public communication study "Study on the modality, efficacy and responses to communication of information or advice to populations or individuals, on the safety and risks of exposure to ionising radiation in any context." 0000-0002-5111-7263 communication study +obo:RBO_00002101 public education study "Study on the modality, efficacy and responses to communication of information or advice to populations on any aspect of radiation, conceived of as an educational programme, and including a wider scope than just safety and risk. For example basic nuclear physics, emergency action advice." 0000-0002-5111-7263 communication study +obo:RBO_00002102 social affairs and community health study "Study involving attitudes, health status, social organisation of defined communities identified by common characteristics such as occupation type, geography, gender identity, with respect to radiation." 0000-0002-5111-7263 community study +obo:RBO_00002103 community planning study "Studies involving creation and assessment of plans for the future physical arrangement, well being, efficiency and condition of a community. It may have the goals of improving health, promoting efficiency in the provision of services and resources on a comprehensive basis for a whole community. In the context of radiation this may be concerned with community planning for dealing with mitigation measures for local NORM, or organised community-wide continegency measures for nuclear accident or recovery from such." 0000-0002-5111-7263 community study +obo:RBO_00002104 community survey study "Study concerned with eliciting information in a structured way concerning issues of interest from members of a community defined by common characteristics, for example occupation, geographical location, personal history or gender." 0000-0002-5111-7263 community study +obo:RBO_00002105 individual behaviour study "A study concerned with human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology at the level of slected individuals. May be carried out by observation or as individual responses to a questioannaire or interview in the case of humans where the person records their own assessment of their behaviour." 0000-0002-5111-7263 behavioural study +obo:RBO_00002106 population behaviour study "A study concerned with human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology within substantial populations of individuals. Likely to be carried out by mass observation or indirect inference." 0000-0002-5111-7263 behavioural study +obo:RBO_00002107 radiotherapeutic modelling study "Mathematical modelling for theraputic regime optimisation and for optimal tumor response, for example modelling spatiotemporal dynamics of tumor and blood volume fraction, and predicting response to radiation therapy. Also studies for beam modelling and multiimaging techniques." 0000-0002-5111-7263 therapeutics study +obo:RBO_00002108 building materials radiological safety study Study of the radiolonuclide components and emissions from building materials 0000-0002-5111-7263 environmental study_ abiotic_anthropogenic +obo:RBO_00002109 building radiological safety study Studies on radiological safety within buildings. Primary purpose os for buildings not specifially designed to hold radioactive materials but anaylyis and mitigation of risks from radioactive exposure from the local environment or materials. 0000-0002-5111-7263 environmental study_ abiotic_anthropogenic +obo:RBO_00002110 meteorology study Study of the weather and atmospheric dynamics mainly with respect to dissemination of radionuclides. 0000-0002-5111-7263 natural environment study +obo:RBO_00002111 environmental study_abiotic "Study of non-living objects in the environment, such as soils or rocks." 0000-0002-5111-7263 natural environment study +obo:RBO_00002112 environmental study_biota ( non human) Study of non-human biota in the natural environment. 0000-0002-5111-7263 natural environment study +obo:RBO_00002113 environmental study_panbiota (all) Study which may include human and non-human biota in the environment. 0000-0002-5111-7263 natural environment study +obo:RBO_00002114 wireless communication radiation study "Study of the measurement, effects and regulation of wireless communication signals, for example mobile phone radiation and microwave communication." 0000-0002-5111-7263 non ionising electromagnetic radiation study +obo:RBO_00002115 gamma ray photon Photons having energies that are greater than tens of thousands of electron volts (eV). Britannica.com The sample was irradiated with Cs-137 gamma ray photons. CHEBI:30212 +obo:RBO_00002116 x-ray photon A photon with energies from about 100 eV (electron volts) to 1 MeV (million electron volts). Britannica.com The sample was irradiated with x-ray photons. CHEBI:30212 +obo:RBO_00002117 irradiation An energy transfer process in which energy in the form of particles or waves is transferred from one entity to another Jack Miller Irradiation of the sample was with x-ray photons. 0000-0003-1741-8297 http://purl.obolibrary.org/obo/ENVO_01001852 obo:RBO_0002000 TRUE +http://purl.obolibrary.org/obo/OBI_0302889 obo:RBO_00002117 +obo:RBO_00002118 radioactive decay A process involving the emission of energy from an atomic nucleus resulting in change in the character of the nucleus obo:RBO_00015006 +obo:RBO_00002119 unplanned irradiation Irradiation that is not the result of a planned process obo:RBO_00002000 +obo:RBO_00002120 unplanned anthropogenic irradiation Unplanned irradiation that is of anthropogenic origin obo:RBO_00002119 +obo:RBO_00002121 unplanned naturally occurring radiation exposure Unplanned irradiation that is non-anthropogenic in origin obo:RBO_00002119 +obo:RBO_00002122 environmental radiation monitoring Environmental monitoring that includes continual assay for radiation dose or quality. http://purl.obolibrary.org/obo/ENVO_02500041 +obo:RBO_00002123 natural environment monitoring Monitoring within an environment which was not man-made. http://purl.obolibrary.org/obo/ENVO_02500041 +obo:RBO_00002124 anthropogenic environment monitoring Monitoring within a man-made or constructed environment http://purl.obolibrary.org/obo/ENVO_02500041 +obo:RBO_00002125 anthropogenic environment radiation monitoring Monitoring for radiation dose or quality within a man-made or constructed environment such as a building or a vehicle. obo:RBO_00002122|obo:RBO_00002124 +obo:RBO_00002126 natural environment radiation monitoring Monitoring for radiation dose or quality within a natural environment. obo:RBO_00002122|obo:RBO_00002123 +obo:RBO_00015000 radiation That energy which is transferred in space and time as part of the process of radiation (ENVO:01001023). obo:BFO_0000040 +obo:RBO_00015001 neutral particle radiation Uncharged particles with kinetic energy imparted by natural or artificial means (such as by a particle accelerator) obo:RBO_00015000 +obo:RBO_00015002 nanodosimetry assay An assay of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers "See H.H. Rossi, Microdosimetry and Radiobiology, Radiation Protection Dosimetry, Volume 13, Issue 1-4, 1 December 1985, Pages 259�265, https://doi.org/10.1093/rpd/13.1-4.259 and Gustavo A. Santa Cruz,Microdosimetry: Principles and applications,Reports of Practical Oncology & Radiotherapy,Volume 21, Issue 2,2016,Pages 135-139,ISSN 1507-1367,https://doi.org/10.1016/j.rpor.2014.10.006." Usually a track structure assay at nm scale obo:RBO_00005041 +obo:RBO_00015003 microdosimetry assay An assay of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 micrometers "See H.H. Rossi, Microdosimetry and Radiobiology, Radiation Protection Dosimetry, Volume 13, Issue 1-4, 1 December 1985, Pages 259�265, https://doi.org/10.1093/rpd/13.1-4.259 and Gustavo A. Santa Cruz,Microdosimetry: Principles and applications,Reports of Practical Oncology & Radiotherapy,Volume 21, Issue 2,2016,Pages 135-139,ISSN 1507-1367,https://doi.org/10.1016/j.rpor.2014.10.006." Usually a track structure assay at micrometre scale obo:RBO_00005041 +obo:RBO_00015004 alpha decay Nuclear decay in which an alpha particle is emitted. https://goldbook.iupac.org/terms/view/A00005 obo:RBO_00002118 alpha-decay http://purl.obolibrary.org/obo/REX_0000017 +obo:RBO_00015005 beta decay Radioactive decay in which a beta particle is emitted or in which orbital electron capture occurs. http://goldbook.iupac.org/B00572.html obo:RBO_00002118 beta-decay http://purl.obolibrary.org/obo/REX_0000007 +obo:RBO_00015006 subatomic process Processes in which electrons or components of the atomic nucleus are participants. BFO:0000015 +obo:RBO_00015007 nanodosimetric measurement datum Measurement of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers obo:RBO_010016 +obo:RBO_00015008 specific energy measurement datum "In microdosimetry the specific energy, z, is the energy deposited by radiation ( in one or more deposition events) in a specified micrometric (or smaller) site divided my the mass of the site. Measured in Gy." obo:RBO_010016 +obo:RBO_00015009 particle track "The path of a particle in matter, delineated by sites where the particle deposits energy." obo:IAO_0000030 +obo:RBO_00015010 nanodosimetry A pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers. PATO:0001241 +obo:RBO_00015011 particle track structure The complete set of spatial coordinates of energy deposition events along a particle track in matter PATO:0001236 +obo:RBO_00015012 ionization cluster "A group of ionization events closely related in time and space, occurring in a specified target volume and originating from a single primary ionizing particle." UBERON:0000000 +obo:RBO_00015013 microdosimetric measurement datum Measurement of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 micrometers. obo:RBO_010016 +obo:RBO_00015014 micrometric volume "A volume of matter characterised by linear dimensions of the order of 0.5- 10's of microns, referred to as the ""site"" in microdosimetry." PATO:0001241 +obo:RBO_00015015 control specimen role "A control specimen role of a biotic or abiotic sample or individual describes a specimen by its purpose, and therefore treatment, within a planned experimental process that tests hypotheses by isolating variables as dictated by the scientific method in order to make a conclusion about the effect of such variables. The quality of control inhering in the sample role exists as a result of the historical treatment of the sample. In a controlled experiment, two or more virtually identical experiments are conducted, but the factor being tested is varied in only one of them. This serves to isolate any causal phenomena. A control may have been subject to treatments during the experiment that might alter its state or behaviour and is therefore distinguishable from the sample as initial input into the experiment. However such treatments should in all cases but that of the variable under scrutiny, be the same as the experimental sample." OBI:0000112 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C64355 +obo:RBO_00015016 approximate sham irradiation Sham irradiation in which an identical irradiation protocol (with the exception of the administration of the radiation exposure) is not followed in every respect. "Use approximate sham irradiation when at least one aspect of the irradiation (with the exception of the administration of the radiation exposure) is not followed precisely. For example, Not placing an organism or sample in a beam line for the same length of time as the irradiated organism(s) or sample(s) were left in the beam." obo:RBO_00005015 +obo:RBO_00015017 internal radiation exposure "Exposure to an inhaled, ingested, injected or implanted source of radiation of any origin as part of a planned or accidental process." Experimental internal radiation exposure of rodents to radon gas through inhalation. obo:RBO_00002000 +obo:RBO_00015018 external radiation exposure Exposure to an external source of radiation of any origin or type. Mice exposed to external radiation from a Sr source. https://orcid.org/0000-0002-5111-7263 obo:RBO_00002000 +obo:RBO_00015019 complete sham irradiation "Sham irradiation in which an identical irradiation protocol is followed in every respect, with the exception of the administration of the radiation exposure." Use complete sham irradiation when all steps of an irradiation protocol are followed for sham control group (with the exception of administration of the radiation exposure). obo:RBO_00005015 +obo:RBO_00015020 internal experimental radiation exposure "Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally by the ingestion, inhalation or implantation of a source of radiation." https://orcid.org/0000-0002-5111-7263 Research subjects participating in a clinical trial using an internally implanted radiation source have an internal experimental radiation exposure obo:RBO_00002008|obo:RBO_00015017 +obo:RBO_00015021 energy deposition event The direct or indirect transfer of energy from radiation to a medium through ionisation or excitation of the atoms of the medium. obo:RBO_00015006 +obo:RBO_00015022 track formation http://purl.obolibrary.org/obo/BFO_0000015 +obo:RBO_00015023 mixed irradiation study "A mixed irradiation study typically involves exposing a sample or system to a combination of different types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation." http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00000082 +obo:RBO_00015024 mixed ion and photon irradiation study "A mixed ion and photon irradiation study typically involves exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation." http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015023 +obo:RBO_00015025 mixed ion and photon simultaneous irradiation study "A mixed ion and photon simultaneous irradiation study typically involves simultaneously exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation." http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015024 +obo:RBO_00015026 mixed ion and photon sequential irradiation study "A mixed ion and photon sequential irradiation study typically involves sequentially exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation." http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015024 +obo:RBO_00015027 multiple ion irradiation study multiple ion mixed irradiation study A multiple ion irradiation study typically involves exposing a sample or system to a combination of different types of charged particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015023 +obo:RBO_00015028 multiple ion simultaneous irradiation study "A multiple ion simultaneous irradiation study typically involves simultaneously exposing a sample or system to a combination of ions. This could include exposure to various forms of particle radiation, for example ion beams. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation." http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015027 +obo:RBO_00015029 multiple ion sequential irradiation study A multiple ion sequential irradiation study involves exposing a sample or system to a combination of different ions. This could include exposure to various forms of particle radiation such as ion beams. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. http://orcid.org/0000-0002-5111-7263|https://orcid.org/0000-0001-9227-0670 obo:RBO_00015027 From e51a33e4a57519b87ec3134895a7c4209eb84472 Mon Sep 17 00:00:00 2001 From: DanBerrios Date: Fri, 26 Apr 2024 18:25:28 +0000 Subject: [PATCH 2/5] Build --- rbo-base.owl | 27 +- rbo-full.owl | 28859 +++++++-------- rbo.owl | 28862 +++++++--------- src/ontology/Makefile | 2 +- src/ontology/components/all_templates.owl | 4 +- src/ontology/imports/bfo_import.owl | 4 +- src/ontology/imports/chebi_import.owl | 4 +- src/ontology/imports/chmo_import.owl | 4 +- src/ontology/imports/cob_import.owl | 4 +- src/ontology/imports/efo_import.owl | 4 +- src/ontology/imports/envo_import.owl | 4 +- src/ontology/imports/go_import.owl | 4 +- src/ontology/imports/ncbitaxon_import.owl | 4 +- src/ontology/imports/obi_import.owl | 4 +- src/ontology/imports/pato_import.owl | 4 +- src/ontology/imports/pco_import.owl | 4 +- src/ontology/imports/ro_import.owl | 4 +- src/ontology/imports/uberon_import.owl | 4 +- src/ontology/imports/uo_import.owl | 4 +- .../reports/rbo-edit.owl-obo-report.tsv | 68 +- src/ontology/reports/rbo.owl-obo-report.tsv | 3380 +- src/templates/RBO_classes.owl | 2092 +- 22 files changed, 27042 insertions(+), 36308 deletions(-) diff --git a/rbo-base.owl b/rbo-base.owl index 3d16f3a..a0ea748 100644 --- a/rbo-base.owl +++ b/rbo-base.owl @@ -1,23 +1,24 @@ - - RBO is an ontology for the effects of radiation on biota in terrestrial and space environments. - Radiation Biology Ontology - - - 2024-02-29 + + RBO is an ontology for the effects of radiation on biota in terrestrial and space environments. + Radiation Biology Ontology + + + 2024-04-26 @@ -99,6 +100,12 @@ + + + + + + @@ -1926,7 +1933,7 @@ - + Planned exposure to radiation generated through a device or exposure to a source emitting ionising radiation 0000-0002-5111-7263 @@ -4952,5 +4959,5 @@ - + diff --git a/rbo-full.owl b/rbo-full.owl index 21a45b3..ed0e3fb 100644 --- a/rbo-full.owl +++ b/rbo-full.owl @@ -2,9 +2,9 @@ - - RBO is an ontology for the effects of radiation on biota in terrestrial and space environments. - Radiation Biology Ontology - - 2024-02-29 + + RBO is an ontology for the effects of radiation on biota in terrestrial and space environments. + Radiation Biology Ontology + + 2024-04-26 @@ -1219,9 +1220,9 @@ We also have the outstanding issue of how to aim different definitions to differ - Examples of a Creator include a person, an organisation, + Examples of a Creator include a person, an organisation, or a service. Typically, the name of a Creator should - be used to indicate the entity. + be used to indicate the entity. http://purl.org/dc/elements/1.1/creator uberon dc-creator @@ -1240,10 +1241,10 @@ We also have the outstanding issue of how to aim different definitions to differ - Typically, Date will be associated with the creation or + Typically, Date will be associated with the creation or availability of the resource. Recommended best practice for encoding the date value is defined in a profile of - ISO 8601 [W3CDTF] and follows the YYYY-MM-DD format. + ISO 8601 [W3CDTF] and follows the YYYY-MM-DD format. A date associated with an event in the life cycle of the resource. @@ -1256,9 +1257,9 @@ We also have the outstanding issue of how to aim different definitions to differ - Description may include but is not limited to: an abstract, + Description may include but is not limited to: an abstract, table of contents, reference to a graphical representation - of content or a free-text account of the content. + of content or a free-text account of the content. http://purl.org/dc/elements/1.1/description uberon dc-description @@ -1294,10 +1295,10 @@ We also have the outstanding issue of how to aim different definitions to differ - + Typically, a Title will be a name by which the resource is formally known. - + http://purl.org/dc/elements/1.1/title uberon dc-title @@ -1346,7 +1347,7 @@ We also have the outstanding issue of how to aim different definitions to differ Mark Miller - 2018-05-11T13:47:29Z + 2018-05-11T13:47:29Z http://purl.org/dc/terms/license uberon dcterms-license @@ -1539,7 +1540,7 @@ We also have the outstanding issue of how to aim different definitions to differ - has_alternative_id + has_alternative_id @@ -1596,7 +1597,7 @@ We also have the outstanding issue of how to aim different definitions to differ - has_obo_namespace + has_obo_namespace @@ -1604,7 +1605,7 @@ We also have the outstanding issue of how to aim different definitions to differ - has_related_synonym + has_related_synonym @@ -1630,7 +1631,7 @@ We also have the outstanding issue of how to aim different definitions to differ - in_subset + in_subset @@ -2081,8 +2082,8 @@ A continuant cannot have an occurrent as part: use 'participates in'. An example is: translation preceded_by transcription; aging preceded_by development (not however death preceded_by aging). Where derives_from links classes of continuants, preceded_by links classes of processes. Clearly, however, these two relations are not independent of each other. Thus if cells of type C1 derive_from cells of type C, then any cell division involving an instance of C1 in a given lineage is preceded_by cellular processes involving an instance of C. The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P. Note that an assertion to the effect that P preceded_by P1 is rather weak; it tells us little about the relations between the underlying instances in virtue of which the preceded_by relation obtains. Typically we will be interested in stronger relations, for example in the relation immediately_preceded_by, or in relations which combine preceded_by with a condition to the effect that the corresponding instances of P and P1 share participants, or that their participants are connected by relations of derivation, or (as a first step along the road to a treatment of causality) that the one process in some way affects (for example, initiates or regulates) the other. is preceded by preceded_by - http://www.obofoundry.org/ro/#OBO_REL:preceded_by - http://www.obofoundry.org/ro/#OBO_REL:preceded_by + http://www.obofoundry.org/ro/#OBO_REL:preceded_by + http://www.obofoundry.org/ro/#OBO_REL:preceded_by BFO:0000062 external uberon @@ -3082,8 +3083,8 @@ Werner suggests a solution based on "Magnitudes" a proposal for which a relation between a process and a continuant, in which the continuant is somehow involved in the process Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time. has_participant - http://www.obofoundry.org/ro/#OBO_REL:has_participant - http://www.obofoundry.org/ro/#OBO_REL:has_participant + http://www.obofoundry.org/ro/#OBO_REL:has_participant + http://www.obofoundry.org/ro/#OBO_REL:has_participant RO:0000057 external has_participant @@ -3396,8 +3397,8 @@ range: spatial region or site (immaterial continuant) Most location relations will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/ located_in - http://www.obofoundry.org/ro/#OBO_REL:located_in - http://www.obofoundry.org/ro/#OBO_REL:located_in + http://www.obofoundry.org/ro/#OBO_REL:located_in + http://www.obofoundry.org/ro/#OBO_REL:located_in RO:0001025 uberon located_in @@ -4798,7 +4799,7 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R.Chris Mungall Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends. - https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1 + https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1 RO:0002222 temporally_related_to @@ -5430,8 +5431,8 @@ where p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. - - cjm + + cjm RO:0002304 external causally_upstream_of,_positive_effect @@ -5453,8 +5454,8 @@ where p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. - - cjm + + cjm RO:0002305 external causally_upstream_of,_negative_effect @@ -6630,8 +6631,8 @@ Each of these 3 primitives can be composed to yield a cross-product of different A relationship that holds between two entities in which the processes executed by the two entities are causally connected. - Considering relabeling as 'pairwise interacts with' This relation and all sub-relations can be applied to either (1) pairs of entities that are interacting at any moment of time (2) populations or species of entity whose members have the disposition to interact (3) classes whose members have the disposition to interact. + Considering relabeling as 'pairwise interacts with' Chris Mungall Note that this relationship type, and sub-relationship types may be redundant with process terms from other ontologies. For example, the symbiotic relationship hierarchy parallels GO. The relations are provided as a convenient shortcut. Consider using the more expressive processual form to capture your data. In the future, these relations will be linked to their cognate processes through rules. @@ -7959,14 +7960,14 @@ For example, A and B may be gene products and binding of B by A positively regul An inflammatory disease that is realized in response to an inflammatory process occurring in the gut (which is itself the realization of a process realized in response to harmful stimuli in the mucosal lining of th gut) Environmental polymorphism in butterflies: These butterflies have a 'responsivity to day length trait' that is realized in response to the duration of the day, and is realized in developmental processes that lead to increased or decreased pigmentation in the adult morph. r 'realized in response to' s iff, r is a realizable (e.g. a plant trait such as responsivity to drought), s is an environmental stimulus (a process), and s directly causes the realization of r. - - - - - Austin Meier - Chris Mungall - David Osumi-Sutherland - Marie Angelique Laporte + + + + + Austin Meier + Chris Mungall + David Osumi-Sutherland + Marie Angelique Laporte triggered by process realized in response to https://docs.google.com/document/d/1KWhZxVBhIPkV6_daHta0h6UyHbjY2eIrnON1WIRGgdY/edit @@ -8159,7 +8160,7 @@ For example, A and B may be gene products and binding of B by A positively regul A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C. - + RO:0019000 gene_ontology regulates_characteristic @@ -8178,7 +8179,7 @@ For example, A and B may be gene products and binding of B by A positively regul A relationship that holds between a process and a characteristic in which process (P) positively regulates characteristic (C) iff: P results in an increase in the intensity or magnitude of C. - + RO:0019001 gene_ontology positively_regulates_characteristic @@ -8201,7 +8202,7 @@ For example, A and B may be gene products and binding of B by A positively regul A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C. - + RO:0019002 gene_ontology negatively_regulates_characteristic @@ -9303,16 +9304,7 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - + @@ -9368,19 +9360,18 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/OBOFoundry/COB/issues/65 https://github.com/oborel/obo-relations/pull/284 + + + + + + + + - - - - - - - - - - + We should name the inverse in COB and avoid the confusing inverse(..) construct @@ -9987,25 +9978,25 @@ For example, A and B may be gene products and binding of B by A positively regul - An atom of an element that exhibits properties that are between those of metals and nonmetals, or that has a mixture of them. The term generally includes boron, silicon, germanium, arsenic, antimony, and tellurium, while carbon, aluminium, selenium, polonium, and astatine are less commonly included. - Wikipedia:Metalloid - chebi_ontology - metalloid - metalloids - CHEBI:137980 + An atom of an element that exhibits properties that are between those of metals and nonmetals, or that has a mixture of them. The term generally includes boron, silicon, germanium, arsenic, antimony, and tellurium, while carbon, aluminium, selenium, polonium, and astatine are less commonly included. + Wikipedia:Metalloid + chebi_ontology + metalloid + metalloids + CHEBI:137980 - metalloid atom + metalloid atom - metalloid + metalloid ChEBI - metalloids + metalloids ChEBI @@ -11158,122 +11149,122 @@ For example, A and B may be gene products and binding of B by A positively regul - A trace radioisotope of argon with atomic mass of 38.964313 and a half-life of 269 years. - 0 - [39Ar] - InChI=1S/Ar/i1-1 - XKRFYHLGVUSROY-BJUDXGSMSA-N - 38.964 - 38.96431 - [Ar] - CAS:25729-41-3 - PMID:16429279 - PMID:17781454 - PMID:17791262 - PMID:28017500 - PMID:28755564 - PMID:30487580 - chebi_ontology - (39)18Ar - (39)Ar - (39)Ar radioisotope - Ar-39 - Ar-39 radioisotope - argon 39 - argon, isotope of mass 39 - argon-39 - CHEBI:155827 + A trace radioisotope of argon with atomic mass of 38.964313 and a half-life of 269 years. + 0 + [39Ar] + InChI=1S/Ar/i1-1 + XKRFYHLGVUSROY-BJUDXGSMSA-N + 38.964 + 38.96431 + [Ar] + CAS:25729-41-3 + PMID:16429279 + PMID:17781454 + PMID:17791262 + PMID:28017500 + PMID:28755564 + PMID:30487580 + chebi_ontology + (39)18Ar + (39)Ar + (39)Ar radioisotope + Ar-39 + Ar-39 radioisotope + argon 39 + argon, isotope of mass 39 + argon-39 + CHEBI:155827 - argon-39 atom + argon-39 atom - CAS:25729-41-3 + CAS:25729-41-3 ChemIDplus - PMID:16429279 + PMID:16429279 Europe PMC - PMID:17781454 + PMID:17781454 Europe PMC - PMID:17791262 + PMID:17791262 Europe PMC - PMID:28017500 + PMID:28017500 Europe PMC - PMID:28755564 + PMID:28755564 Europe PMC - PMID:30487580 + PMID:30487580 Europe PMC - (39)18Ar + (39)18Ar ChEBI - (39)Ar + (39)Ar ChemIDplus - (39)Ar radioisotope + (39)Ar radioisotope ChEBI - Ar-39 + Ar-39 ChEBI - Ar-39 radioisotope + Ar-39 radioisotope ChEBI - argon 39 + argon 39 ChEBI - argon, isotope of mass 39 + argon, isotope of mass 39 ChemIDplus - argon-39 + argon-39 ChEBI @@ -13765,151 +13756,151 @@ For example, A and B may be gene products and binding of B by A positively regul - A minor stable isotope of calcium with relative atomic mass 42.95877 and 0.135 atom percent natural abundance. - 0 - [43Ca] - InChI=1S/Ca/i1+3 - OYPRJOBELJOOCE-AKLPVKDBSA-N - 42.959 - 42.95877 - [43Ca] - CAS:14333-06-3 - PMID:11859764 - PMID:19117733 - PMID:20463996 - PMID:20574585 - PMID:23163540 - PMID:23398971 - PMID:24874995 - PMID:25306191 - PMID:29770988 - PMID:6548252 - ((43)Ca)calcium - chebi_ontology - (43)20Ca - (43)Ca - (43)calcium - Ca-43 - calcium, isotope of mass 43 - calcium-43 - calcium-43 isotope - CHEBI:176566 + A minor stable isotope of calcium with relative atomic mass 42.95877 and 0.135 atom percent natural abundance. + 0 + [43Ca] + InChI=1S/Ca/i1+3 + OYPRJOBELJOOCE-AKLPVKDBSA-N + 42.959 + 42.95877 + [43Ca] + CAS:14333-06-3 + PMID:11859764 + PMID:19117733 + PMID:20463996 + PMID:20574585 + PMID:23163540 + PMID:23398971 + PMID:24874995 + PMID:25306191 + PMID:29770988 + PMID:6548252 + ((43)Ca)calcium + chebi_ontology + (43)20Ca + (43)Ca + (43)calcium + Ca-43 + calcium, isotope of mass 43 + calcium-43 + calcium-43 isotope + CHEBI:176566 - calcium-43 atom + calcium-43 atom - CAS:14333-06-3 + CAS:14333-06-3 ChemIDplus - PMID:11859764 + PMID:11859764 Europe PMC - PMID:19117733 + PMID:19117733 Europe PMC - PMID:20463996 + PMID:20463996 Europe PMC - PMID:20574585 + PMID:20574585 Europe PMC - PMID:23163540 + PMID:23163540 Europe PMC - PMID:23398971 + PMID:23398971 Europe PMC - PMID:24874995 + PMID:24874995 Europe PMC - PMID:25306191 + PMID:25306191 Europe PMC - PMID:29770988 + PMID:29770988 Europe PMC - PMID:6548252 + PMID:6548252 Europe PMC - ((43)Ca)calcium + ((43)Ca)calcium IUPAC - (43)20Ca + (43)20Ca ChEBI - (43)Ca + (43)Ca ChemIDplus - (43)calcium + (43)calcium ChEBI - Ca-43 + Ca-43 ChEBI - calcium, isotope of mass 43 + calcium, isotope of mass 43 ChemIDplus - calcium-43 + calcium-43 ChemIDplus - calcium-43 isotope + calcium-43 isotope ChEBI @@ -13919,130 +13910,130 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of molybdenum with relative atomic mass 97.90541, 24.29 atom percent natural abundance and nuclear spin 0. - 0 - [98Mo] - InChI=1S/Mo/i1+2 - ZOKXTWBITQBERF-NJFSPNSNSA-N - 97.905 - 97.90541 - [98Mo] - CAS:14392-20-2 - PMID:19720541 - PMID:22796396 - PMID:22970917 - PMID:24593536 - PMID:25087173 - PMID:25168118 - PMID:25880611 - PMID:26397967 - PMID:26808401 - ((98)Mo)molybdenum - chebi_ontology - (98)42Mo - (98)Mo - Mo-98 - molybdenum, isotope of mass 98 - molybdenum-98 - CHEBI:176570 + A stable isotope of molybdenum with relative atomic mass 97.90541, 24.29 atom percent natural abundance and nuclear spin 0. + 0 + [98Mo] + InChI=1S/Mo/i1+2 + ZOKXTWBITQBERF-NJFSPNSNSA-N + 97.905 + 97.90541 + [98Mo] + CAS:14392-20-2 + PMID:19720541 + PMID:22796396 + PMID:22970917 + PMID:24593536 + PMID:25087173 + PMID:25168118 + PMID:25880611 + PMID:26397967 + PMID:26808401 + ((98)Mo)molybdenum + chebi_ontology + (98)42Mo + (98)Mo + Mo-98 + molybdenum, isotope of mass 98 + molybdenum-98 + CHEBI:176570 - molybdenum-98 atom + molybdenum-98 atom - CAS:14392-20-2 + CAS:14392-20-2 ChemIDplus - PMID:19720541 + PMID:19720541 Europe PMC - PMID:22796396 + PMID:22796396 Europe PMC - PMID:22970917 + PMID:22970917 Europe PMC - PMID:24593536 + PMID:24593536 Europe PMC - PMID:25087173 + PMID:25087173 SUBMITTER - PMID:25168118 + PMID:25168118 Europe PMC - PMID:25880611 + PMID:25880611 Europe PMC - PMID:26397967 + PMID:26397967 Europe PMC - PMID:26808401 + PMID:26808401 Europe PMC - ((98)Mo)molybdenum + ((98)Mo)molybdenum IUPAC - (98)42Mo + (98)42Mo ChEBI - (98)Mo + (98)Mo ChemIDplus - Mo-98 + Mo-98 ChEBI - molybdenum, isotope of mass 98 + molybdenum, isotope of mass 98 ChemIDplus - molybdenum-98 + molybdenum-98 ChemIDplus @@ -14052,123 +14043,123 @@ For example, A and B may be gene products and binding of B by A positively regul - A major stable isotope of strontium with relative atomic mass 87.90561 and 82.58 atom percent natural abundance. - 0 - [88Sr] - InChI=1S/Sr/i1+0 - CIOAGBVUUVVLOB-IGMARMGPSA-N - 87.906 - 87.90561 - [88Sr] - CAS:14119-10-9 - PMID:11893161 - PMID:27829691 - PMID:32350478 - PMID:33328666 - PMID:33834832 - PMID:6337617 - ((88)Sr)strontium - chebi_ontology - (88)38Sr - (88)Sr - (88)strontium - Sr-88 - strontium, isotope of mass 88 - strontium-88 - strontium-88 isotope - CHEBI:176571 + A major stable isotope of strontium with relative atomic mass 87.90561 and 82.58 atom percent natural abundance. + 0 + [88Sr] + InChI=1S/Sr/i1+0 + CIOAGBVUUVVLOB-IGMARMGPSA-N + 87.906 + 87.90561 + [88Sr] + CAS:14119-10-9 + PMID:11893161 + PMID:27829691 + PMID:32350478 + PMID:33328666 + PMID:33834832 + PMID:6337617 + ((88)Sr)strontium + chebi_ontology + (88)38Sr + (88)Sr + (88)strontium + Sr-88 + strontium, isotope of mass 88 + strontium-88 + strontium-88 isotope + CHEBI:176571 - strontium-88 atom + strontium-88 atom - CAS:14119-10-9 + CAS:14119-10-9 ChemIDplus - PMID:11893161 + PMID:11893161 Europe PMC - PMID:27829691 + PMID:27829691 Europe PMC - PMID:32350478 + PMID:32350478 Europe PMC - PMID:33328666 + PMID:33328666 Europe PMC - PMID:33834832 + PMID:33834832 Europe PMC - PMID:6337617 + PMID:6337617 SUBMITTER - ((88)Sr)strontium + ((88)Sr)strontium IUPAC - (88)38Sr + (88)38Sr ChEBI - (88)Sr + (88)Sr ChemIDplus - (88)strontium + (88)strontium ChEBI - Sr-88 + Sr-88 ChEBI - strontium, isotope of mass 88 + strontium, isotope of mass 88 ChemIDplus - strontium-88 + strontium-88 ChemIDplus - strontium-88 isotope + strontium-88 isotope ChEBI @@ -14178,130 +14169,130 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of rubidium with relative atomic mass 84.91179, 72.17 atom percent natural abundance and nuclear spin 5/2. - 0 - [85Rb] - InChI=1S/Rb/i1+0 - IGLNJRXAVVLDKE-IGMARMGPSA-N - 84.912 - 84.91179 - [85Rb] - CAS:13982-12-2 - PMID:18026483 - PMID:18033464 - PMID:18291893 - PMID:18382518 - PMID:19855587 - PMID:25087142 - PMID:32909800 - PMID:33709729 - PMID:34170158 - ((85)Rb)rubidium - chebi_ontology - (85)37Rb - (85)Rb - Rb-85 - rubidium, isotope of mass 85 - rubidium-85 - CHEBI:176572 + A stable isotope of rubidium with relative atomic mass 84.91179, 72.17 atom percent natural abundance and nuclear spin 5/2. + 0 + [85Rb] + InChI=1S/Rb/i1+0 + IGLNJRXAVVLDKE-IGMARMGPSA-N + 84.912 + 84.91179 + [85Rb] + CAS:13982-12-2 + PMID:18026483 + PMID:18033464 + PMID:18291893 + PMID:18382518 + PMID:19855587 + PMID:25087142 + PMID:32909800 + PMID:33709729 + PMID:34170158 + ((85)Rb)rubidium + chebi_ontology + (85)37Rb + (85)Rb + Rb-85 + rubidium, isotope of mass 85 + rubidium-85 + CHEBI:176572 - rubidium-85 atom + rubidium-85 atom - CAS:13982-12-2 + CAS:13982-12-2 ChemIDplus - PMID:18026483 + PMID:18026483 Europe PMC - PMID:18033464 + PMID:18033464 Europe PMC - PMID:18291893 + PMID:18291893 Europe PMC - PMID:18382518 + PMID:18382518 Europe PMC - PMID:19855587 + PMID:19855587 Europe PMC - PMID:25087142 + PMID:25087142 SUBMITTER - PMID:32909800 + PMID:32909800 Europe PMC - PMID:33709729 + PMID:33709729 Europe PMC - PMID:34170158 + PMID:34170158 Europe PMC - ((85)Rb)rubidium + ((85)Rb)rubidium IUPAC - (85)37Rb + (85)37Rb ChEBI - (85)Rb + (85)Rb ChemIDplus - Rb-85 + Rb-85 ChEBI - rubidium, isotope of mass 85 + rubidium, isotope of mass 85 ChemIDplus - rubidium-85 + rubidium-85 ChemIDplus @@ -14311,145 +14302,145 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of selenium with relative atomic mass 81.91670, 8.82 atom percent natural abundance and nuclear spin 0. - 0 - [82Se] - InChI=1S/Se/i1+3 - BUGBHKTXTAQXES-AKLPVKDBSA-N - 81.917 - 81.91670 - [82Se] - CAS:14687-58-2 - Chemspider:4892236 - PMID:16028633 - PMID:18781022 - PMID:21139275 - PMID:22258472 - PMID:23575454 - PMID:29932707 - PMID:30881205 - PMID:31386478 - PMID:31951429 - PMID:33576665 - PMID:6337549 - ((82)Se)selenium - chebi_ontology - (82)34Se - (82)Se - Se-82 - selenium, isotope of mass 82 - selenium-82 - CHEBI:176573 + A stable isotope of selenium with relative atomic mass 81.91670, 8.82 atom percent natural abundance and nuclear spin 0. + 0 + [82Se] + InChI=1S/Se/i1+3 + BUGBHKTXTAQXES-AKLPVKDBSA-N + 81.917 + 81.91670 + [82Se] + CAS:14687-58-2 + Chemspider:4892236 + PMID:16028633 + PMID:18781022 + PMID:21139275 + PMID:22258472 + PMID:23575454 + PMID:29932707 + PMID:30881205 + PMID:31386478 + PMID:31951429 + PMID:33576665 + PMID:6337549 + ((82)Se)selenium + chebi_ontology + (82)34Se + (82)Se + Se-82 + selenium, isotope of mass 82 + selenium-82 + CHEBI:176573 - selenium-82 atom + selenium-82 atom - CAS:14687-58-2 + CAS:14687-58-2 ChemIDplus - PMID:16028633 + PMID:16028633 Europe PMC - PMID:18781022 + PMID:18781022 Europe PMC - PMID:21139275 + PMID:21139275 Europe PMC - PMID:22258472 + PMID:22258472 Europe PMC - PMID:23575454 + PMID:23575454 Europe PMC - PMID:29932707 + PMID:29932707 Europe PMC - PMID:30881205 + PMID:30881205 Europe PMC - PMID:31386478 + PMID:31386478 Europe PMC - PMID:31951429 + PMID:31951429 Europe PMC - PMID:33576665 + PMID:33576665 Europe PMC - PMID:6337549 + PMID:6337549 SUBMITTER - ((82)Se)selenium + ((82)Se)selenium IUPAC - (82)34Se + (82)34Se ChEBI - (82)Se + (82)Se ChemIDplus - Se-82 + Se-82 ChEBI - selenium, isotope of mass 82 + selenium, isotope of mass 82 ChemIDplus - selenium-82 + selenium-82 ChemIDplus @@ -14459,130 +14450,130 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of zinc with relative atomic mass 65.92603, 27.7 atom percent natural abundance and nuclear spin 0. - 0 - [66Zn] - InChI=1S/Zn/i1+1 - HCHKCACWOHOZIP-OUBTZVSYSA-N - 65.926 - 65.92603 - [66Zn] - CAS:14378-33-7 - PMID:12447866 - PMID:19836537 - PMID:20155761 - PMID:21047059 - PMID:24196216 - PMID:26065372 - PMID:26808401 - PMID:27189145 - PMID:27306032 - ((66)Zn)zinc - chebi_ontology - (66)30Zn - (66)Zn - Zn-66 - zinc, isotope of mass 66 - zinc-66 - CHEBI:176574 + A stable isotope of zinc with relative atomic mass 65.92603, 27.7 atom percent natural abundance and nuclear spin 0. + 0 + [66Zn] + InChI=1S/Zn/i1+1 + HCHKCACWOHOZIP-OUBTZVSYSA-N + 65.926 + 65.92603 + [66Zn] + CAS:14378-33-7 + PMID:12447866 + PMID:19836537 + PMID:20155761 + PMID:21047059 + PMID:24196216 + PMID:26065372 + PMID:26808401 + PMID:27189145 + PMID:27306032 + ((66)Zn)zinc + chebi_ontology + (66)30Zn + (66)Zn + Zn-66 + zinc, isotope of mass 66 + zinc-66 + CHEBI:176574 - zinc-66 atom + zinc-66 atom - PMID:26065372 - Europe PMC - - - - - PMID:26808401 - Europe PMC - - - - - PMID:27189145 + PMID:27189145 Europe PMC - PMID:27306032 + PMID:27306032 Europe PMC - ((66)Zn)zinc + ((66)Zn)zinc IUPAC - (66)30Zn + (66)30Zn ChEBI - (66)Zn + (66)Zn ChemIDplus - Zn-66 + Zn-66 ChemIDplus - zinc, isotope of mass 66 + zinc, isotope of mass 66 ChemIDplus - zinc-66 + zinc-66 ChemIDplus - CAS:14378-33-7 + CAS:14378-33-7 ChemIDplus - PMID:12447866 + PMID:12447866 SUBMITTER - PMID:19836537 + PMID:19836537 + Europe PMC + + + + + PMID:20155761 + Europe PMC + + + + + PMID:21047059 Europe PMC - PMID:20155761 + PMID:24196216 Europe PMC - PMID:21047059 + PMID:26065372 Europe PMC - PMID:24196216 + PMID:26808401 Europe PMC @@ -14592,109 +14583,109 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of nickel with relative atomic mass 59.93079, 26.223 atom percent natural abundance and nuclear spin 0. - 0 - [60Ni] - InChI=1S/Ni/i1+1 - PXHVJJICTQNCMI-OUBTZVSYSA-N - 59.931 - 59.93079 - [60Ni] - CAS:13981-80-1 - PMID:15308160 - PMID:22583786 - PMID:23149182 - PMID:25126912 - PMID:25700212 - PMID:26709546 - PMID:29376683 - ((60)Ni)nickel - chebi_ontology - (60)Ni - Ni-60 - nickel, isotope of mass 60 - nickel-60 - CHEBI:176575 + A stable isotope of nickel with relative atomic mass 59.93079, 26.223 atom percent natural abundance and nuclear spin 0. + 0 + [60Ni] + InChI=1S/Ni/i1+1 + PXHVJJICTQNCMI-OUBTZVSYSA-N + 59.931 + 59.93079 + [60Ni] + CAS:13981-80-1 + PMID:15308160 + PMID:22583786 + PMID:23149182 + PMID:25126912 + PMID:25700212 + PMID:26709546 + PMID:29376683 + ((60)Ni)nickel + chebi_ontology + (60)Ni + Ni-60 + nickel, isotope of mass 60 + nickel-60 + CHEBI:176575 - nickel-60 atom + nickel-60 atom - CAS:13981-80-1 + CAS:13981-80-1 ChemIDplus - PMID:15308160 + PMID:15308160 Europe PMC - PMID:22583786 + PMID:22583786 Europe PMC - PMID:23149182 + PMID:23149182 Europe PMC - PMID:25126912 + PMID:25126912 Europe PMC - PMID:25700212 + PMID:25700212 Europe PMC - PMID:26709546 + PMID:26709546 Europe PMC - PMID:29376683 + PMID:29376683 Europe PMC - ((60)Ni)nickel + ((60)Ni)nickel IUPAC - (60)Ni + (60)Ni ChEBI - Ni-60 + Ni-60 ChEBI - nickel, isotope of mass 60 + nickel, isotope of mass 60 ChemIDplus - nickel-60 + nickel-60 ChemIDplus @@ -14704,172 +14695,172 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of cobalt with relative atomic mass 58.93319, 100 atom percent natural abundance and nuclear spin 7/2. - 0 - [59Co] - InChI=1S/Co/i1+0 - GUTLYIVDDKVIGB-IGMARMGPSA-N - 58.933 - 58.93319 - [59Co] - PMID:10617436 - PMID:10940985 - PMID:11421673 - PMID:11528329 - PMID:12943912 - PMID:19150229 - PMID:19421527 - PMID:25069794 - PMID:25169133 - PMID:26066447 - PMID:26641288 - PMID:27355901 - PMID:30137661 - PMID:31367328 - PMID:32478347 - ((59)Co)cobalt - chebi_ontology - (59)27Co - (59)Co - Co-59 - cobalt, isotope of mass 59 - cobalt-(59)Co - cobalt-59 - CHEBI:176578 + A stable isotope of cobalt with relative atomic mass 58.93319, 100 atom percent natural abundance and nuclear spin 7/2. + 0 + [59Co] + InChI=1S/Co/i1+0 + GUTLYIVDDKVIGB-IGMARMGPSA-N + 58.933 + 58.93319 + [59Co] + PMID:10617436 + PMID:10940985 + PMID:11421673 + PMID:11528329 + PMID:12943912 + PMID:19150229 + PMID:19421527 + PMID:25069794 + PMID:25169133 + PMID:26066447 + PMID:26641288 + PMID:27355901 + PMID:30137661 + PMID:31367328 + PMID:32478347 + ((59)Co)cobalt + chebi_ontology + (59)27Co + (59)Co + Co-59 + cobalt, isotope of mass 59 + cobalt-(59)Co + cobalt-59 + CHEBI:176578 - cobalt-59 atom + cobalt-59 atom - PMID:10617436 + PMID:10617436 Europe PMC - PMID:10940985 + PMID:10940985 Europe PMC - PMID:11421673 + PMID:11421673 Europe PMC - PMID:11528329 + PMID:11528329 SUBMITTER - PMID:12943912 + PMID:12943912 Europe PMC - PMID:19150229 + PMID:19150229 Europe PMC - PMID:19421527 + PMID:19421527 Europe PMC - PMID:25069794 + PMID:25069794 Europe PMC - PMID:25169133 + PMID:25169133 Europe PMC - PMID:26066447 + PMID:26066447 Europe PMC - PMID:26641288 + PMID:26641288 Europe PMC - PMID:27355901 + PMID:27355901 Europe PMC - PMID:30137661 + PMID:30137661 Europe PMC - PMID:31367328 + PMID:31367328 Europe PMC - PMID:32478347 + PMID:32478347 Europe PMC - ((59)Co)cobalt + ((59)Co)cobalt IUPAC - (59)27Co + (59)27Co ChEBI - (59)Co + (59)Co ChEBI - Co-59 + Co-59 ChEBI - cobalt, isotope of mass 59 + cobalt, isotope of mass 59 ChEBI - cobalt-(59)Co + cobalt-(59)Co ChEBI - cobalt-59 + cobalt-59 ChEBI @@ -14879,102 +14870,102 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of manganese with relative atomic mass 54.93804, 100 atom percent natural abundance and nuclear spin 5/2. - 0 - [55Mn] - InChI=1S/Mn/i1+0 - PWHULOQIROXLJO-IGMARMGPSA-N - 54.938 - 54.93804 - [55Mn] - PMID:20645339 - PMID:21058720 - PMID:21341708 - PMID:24993844 - PMID:25179135 - PMID:25891681 - ((55)Mn)manganese - chebi_ontology - (55)25Mn - (55)Mn - Mn-55 - manganese, isotope of mass 55 - manganese-55 - CHEBI:176583 + A stable isotope of manganese with relative atomic mass 54.93804, 100 atom percent natural abundance and nuclear spin 5/2. + 0 + [55Mn] + InChI=1S/Mn/i1+0 + PWHULOQIROXLJO-IGMARMGPSA-N + 54.938 + 54.93804 + [55Mn] + PMID:20645339 + PMID:21058720 + PMID:21341708 + PMID:24993844 + PMID:25179135 + PMID:25891681 + ((55)Mn)manganese + chebi_ontology + (55)25Mn + (55)Mn + Mn-55 + manganese, isotope of mass 55 + manganese-55 + CHEBI:176583 - manganese-55 atom + manganese-55 atom - PMID:20645339 + PMID:20645339 Europe PMC - PMID:21058720 + PMID:21058720 Europe PMC - PMID:21341708 + PMID:21341708 Europe PMC - PMID:24993844 + PMID:24993844 Europe PMC - PMID:25179135 + PMID:25179135 Europe PMC - PMID:25891681 + PMID:25891681 Europe PMC - ((55)Mn)manganese + ((55)Mn)manganese IUPAC - (55)25Mn + (55)25Mn ChEBI - (55)Mn + (55)Mn ChEBI - Mn-55 + Mn-55 ChEBI - manganese, isotope of mass 55 + manganese, isotope of mass 55 ChEBI - manganese-55 + manganese-55 ChEBI @@ -14984,60 +14975,60 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of arsenic with relative atomic mass 74.921596, 100 atom percent natural abundance and nuclear spin 3/2. - 0 - [75As] - InChI=1S/As/i1+0 - RQNWIZPPADIBDY-IGMARMGPSA-N - 74.922 - 74.92159 - [75As] - ((75)As)arsenic - chebi_ontology - (75)33As - (75)As - As-75 - arsenic, isotope of mass 75 - arsenic-75 - CHEBI:176584 + A stable isotope of arsenic with relative atomic mass 74.921596, 100 atom percent natural abundance and nuclear spin 3/2. + 0 + [75As] + InChI=1S/As/i1+0 + RQNWIZPPADIBDY-IGMARMGPSA-N + 74.922 + 74.92159 + [75As] + ((75)As)arsenic + chebi_ontology + (75)33As + (75)As + As-75 + arsenic, isotope of mass 75 + arsenic-75 + CHEBI:176584 - arsenic-75 atom + arsenic-75 atom - ((75)As)arsenic + ((75)As)arsenic IUPAC - (75)33As + (75)33As ChEBI - (75)As + (75)As ChEBI - As-75 + As-75 ChEBI - arsenic, isotope of mass 75 + arsenic, isotope of mass 75 ChEBI - arsenic-75 + arsenic-75 ChEBI @@ -15311,59 +15302,59 @@ For example, A and B may be gene products and binding of B by A positively regul - An iron group element atom that has atomic number 26. - 0 - Fe - InChI=1S/Fe - XEEYBQQBJWHFJM-UHFFFAOYSA-N - 55.84500 - 55.93494 - [Fe] - CHEBI:13322 - CHEBI:24872 - CHEBI:5974 - CAS:7439-89-6 - DrugBank:DB01592 - HMDB:HMDB0015531 - KEGG:C00023 - Reaxys:4122945 - WebElements:Fe + An iron group element atom that has atomic number 26. + 0 + Fe + InChI=1S/Fe + XEEYBQQBJWHFJM-UHFFFAOYSA-N + 55.84500 + 55.93494 + [Fe] + CHEBI:13322 + CHEBI:24872 + CHEBI:5974 + CAS:7439-89-6 + DrugBank:DB01592 + HMDB:HMDB0015531 + KEGG:C00023 + Reaxys:4122945 + WebElements:Fe iron - chebi_ontology + chebi_ontology 26Fe Eisen - Fe + Fe Iron fer ferrum hierro iron - CHEBI:18248 + CHEBI:18248 - iron atom + iron atom - CAS:7439-89-6 + CAS:7439-89-6 ChemIDplus - CAS:7439-89-6 + CAS:7439-89-6 KEGG COMPOUND - CAS:7439-89-6 + CAS:7439-89-6 NIST Chemistry WebBook - Reaxys:4122945 + Reaxys:4122945 Reaxys @@ -15388,13 +15379,13 @@ For example, A and B may be gene products and binding of B by A positively regul - Fe + Fe IUPAC - Fe + Fe UniProt @@ -15466,97 +15457,97 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Mn - InChI=1S/Mn - PWHULOQIROXLJO-UHFFFAOYSA-N - 54.93805 - 54.93804 - [Mn] - CHEBI:13382 - CHEBI:25153 - CHEBI:6681 - CAS:7439-96-5 - KEGG:C00034 - WebElements:Mn - manganese - chebi_ontology - 25Mn - Mangan - Manganese - Mn - manganese - manganeso - manganum - CHEBI:18291 + 0 + Mn + InChI=1S/Mn + PWHULOQIROXLJO-UHFFFAOYSA-N + 54.93805 + 54.93804 + [Mn] + CHEBI:13382 + CHEBI:25153 + CHEBI:6681 + CAS:7439-96-5 + KEGG:C00034 + WebElements:Mn + manganese + chebi_ontology + 25Mn + Mangan + Manganese + Mn + manganese + manganeso + manganum + CHEBI:18291 - manganese atom + manganese atom - CAS:7439-96-5 + CAS:7439-96-5 ChemIDplus - CAS:7439-96-5 + CAS:7439-96-5 KEGG COMPOUND - manganese + manganese IUPAC - 25Mn + 25Mn IUPAC - Mangan - NIST_Chemistry_WebBook + Mangan + NIST_Chemistry_WebBook - Manganese + Manganese KEGG_COMPOUND - Mn + Mn IUPAC - Mn + Mn UniProt - manganese + manganese ChEBI - manganeso + manganeso ChEBI - manganum + manganum ChEBI @@ -15943,137 +15934,137 @@ For example, A and B may be gene products and binding of B by A positively regul - A carbon group element atom with a symbol Fl and atomic number 114. - 0 - Fl - InChI=1S/Fl - WIHJCBVMYKIGOT-UHFFFAOYSA-N - 289.000 - 289.00000 - [Fl] - PMID:16833611 - PMID:17919027 - PMID:19905506 - PMID:20379506 - PMID:20867370 - PMID:23787759 - PMID:24456007 - PMID:29711350 - PMID:36092655 - Wikipedia:Flerovium - chebi_ontology - 114Fl - 114Uuq - E114 - Fl - Uuq - eka-lead - element 114 - ununquadium - CHEBI:194531 + A carbon group element atom with a symbol Fl and atomic number 114. + 0 + Fl + InChI=1S/Fl + WIHJCBVMYKIGOT-UHFFFAOYSA-N + 289.000 + 289.00000 + [Fl] + PMID:16833611 + PMID:17919027 + PMID:19905506 + PMID:20379506 + PMID:20867370 + PMID:23787759 + PMID:24456007 + PMID:29711350 + PMID:36092655 + Wikipedia:Flerovium + chebi_ontology + 114Fl + 114Uuq + E114 + Fl + Uuq + eka-lead + element 114 + ununquadium + CHEBI:194531 - flerovium atom + flerovium atom - PMID:16833611 + PMID:16833611 Europe PMC - PMID:17919027 + PMID:17919027 Europe PMC - PMID:19905506 + PMID:19905506 Europe PMC - PMID:20379506 + PMID:20379506 Europe PMC - PMID:20867370 + PMID:20867370 Europe PMC - PMID:23787759 + PMID:23787759 Europe PMC - PMID:24456007 + PMID:24456007 Europe PMC - PMID:29711350 + PMID:29711350 Europe PMC - PMID:36092655 + PMID:36092655 Europe PMC - 114Fl + 114Fl ChEBI - 114Uuq + 114Uuq ChEBI - E114 + E114 ChEBI - Fl + Fl ChEBI - Uuq + Uuq ChEBI - eka-lead + eka-lead ChEBI - element 114 + element 114 ChEBI - ununquadium + ununquadium ChEBI @@ -16083,102 +16074,102 @@ For example, A and B may be gene products and binding of B by A positively regul - A boron group element atom with a symbol Nh and atomic number 113. - 0 - Nh - InChI=1S/Nh - KUGNSLWRKGRKGS-UHFFFAOYSA-N - 286.000 - 286.00000 - [Nh] - PMID:19049424 - PMID:34142795 - PMID:34917588 - PMID:36149319 - PMID:9913354 - Wikipedia:Nihonium - chebi_ontology - 113Nh - E113 - Nh - Uut - eka-thallium - element 113 - ununtrium - CHEBI:194533 + A boron group element atom with a symbol Nh and atomic number 113. + 0 + Nh + InChI=1S/Nh + KUGNSLWRKGRKGS-UHFFFAOYSA-N + 286.000 + 286.00000 + [Nh] + PMID:19049424 + PMID:34142795 + PMID:34917588 + PMID:36149319 + PMID:9913354 + Wikipedia:Nihonium + chebi_ontology + 113Nh + E113 + Nh + Uut + eka-thallium + element 113 + ununtrium + CHEBI:194533 - nihonium atom + nihonium atom - PMID:19049424 + PMID:19049424 Europe PMC - PMID:34142795 + PMID:34142795 Europe PMC - PMID:34917588 + PMID:34917588 Europe PMC - PMID:36149319 + PMID:36149319 Europe PMC - PMID:9913354 + PMID:9913354 Europe PMC - 113Nh + 113Nh ChEBI - E113 + E113 ChEBI - Nh + Nh ChEBI - Uut + Uut ChEBI - eka-thallium + eka-thallium ChEBI - element 113 + element 113 ChEBI - ununtrium + ununtrium ChEBI @@ -16188,81 +16179,81 @@ For example, A and B may be gene products and binding of B by A positively regul - A pnictogen atom with a symbol Mc and atomic number 115. - 0 - Mc - InChI=1S/Mc - QDXZEHQJHSHEQF-UHFFFAOYSA-N - 289.000 - 289.00000 - [Mc] - PMID:24074079 - PMID:34142795 - Wikipedia:Moscovium - chebi_ontology - 115Mc - E115 - Mc - Uup - eka-bismuth - element 115 - ununpentium - CHEBI:194535 + A pnictogen atom with a symbol Mc and atomic number 115. + 0 + Mc + InChI=1S/Mc + QDXZEHQJHSHEQF-UHFFFAOYSA-N + 289.000 + 289.00000 + [Mc] + PMID:24074079 + PMID:34142795 + Wikipedia:Moscovium + chebi_ontology + 115Mc + E115 + Mc + Uup + eka-bismuth + element 115 + ununpentium + CHEBI:194535 - moscovium atom + moscovium atom - PMID:24074079 + PMID:24074079 Europe PMC - PMID:34142795 + PMID:34142795 Europe PMC - 115Mc + 115Mc ChEBI - E115 + E115 ChEBI - Mc + Mc ChEBI - Uup + Uup ChEBI - eka-bismuth + eka-bismuth ChEBI - element 115 + element 115 ChEBI - ununpentium + ununpentium ChEBI @@ -16272,81 +16263,81 @@ For example, A and B may be gene products and binding of B by A positively regul - A chalcogen atom with a symbol Lv and atomic number 116. - 0 - Lv - InChI=1S/Lv - ONFASNXETZOODS-UHFFFAOYSA-N - 293.000 - 293.00000 - [Lv] - PMID:17381195 - PMID:27554416 - Wikipedia:Livermorium - chebi_ontology - 116Lv - E116 - Lv - Uuh - eka-polonium - element 116 - ununhexium - CHEBI:194537 + A chalcogen atom with a symbol Lv and atomic number 116. + 0 + Lv + InChI=1S/Lv + ONFASNXETZOODS-UHFFFAOYSA-N + 293.000 + 293.00000 + [Lv] + PMID:17381195 + PMID:27554416 + Wikipedia:Livermorium + chebi_ontology + 116Lv + E116 + Lv + Uuh + eka-polonium + element 116 + ununhexium + CHEBI:194537 - livermorium atom + livermorium atom - PMID:17381195 + PMID:17381195 Europe PMC - PMID:27554416 + PMID:27554416 Europe PMC - 116Lv + 116Lv ChEBI - E116 + E116 ChEBI - Lv + Lv ChEBI - Uuh + Uuh ChEBI - eka-polonium + eka-polonium ChEBI - element 116 + element 116 ChEBI - ununhexium + ununhexium ChEBI @@ -16356,95 +16347,95 @@ For example, A and B may be gene products and binding of B by A positively regul - A halogen atom with a symbol Ts and atomic number 117. - 0 - Ts - InChI=1S/Ts - INMSAURDCVBGHH-UHFFFAOYSA-N - 293.000 - 293.00000 - [Ts] - PMID:16483205 - PMID:19367904 - PMID:20395479 - PMID:23090670 - Wikipedia:Tennessine - chebi_ontology - 117Ts - E117 - Ts - Uus - eka-astatine - element 117 - ununseptium - CHEBI:194539 + A halogen atom with a symbol Ts and atomic number 117. + 0 + Ts + InChI=1S/Ts + INMSAURDCVBGHH-UHFFFAOYSA-N + 293.000 + 293.00000 + [Ts] + PMID:16483205 + PMID:19367904 + PMID:20395479 + PMID:23090670 + Wikipedia:Tennessine + chebi_ontology + 117Ts + E117 + Ts + Uus + eka-astatine + element 117 + ununseptium + CHEBI:194539 - tennessine atom + tennessine atom - PMID:16483205 + PMID:16483205 Europe PMC - PMID:19367904 + PMID:19367904 Europe PMC - PMID:20395479 + PMID:20395479 Europe PMC - PMID:23090670 + PMID:23090670 Europe PMC - 117Ts + 117Ts ChEBI - E117 + E117 ChEBI - Ts + Ts ChEBI - Uus + Uus ChEBI - eka-astatine + eka-astatine ChEBI - element 117 + element 117 ChEBI - ununseptium + ununseptium ChEBI @@ -16455,108 +16446,108 @@ For example, A and B may be gene products and binding of B by A positively regul - A p-block element atom with a symbol Og and atomic number 118. - 0 - InChI=1S/Og - GOANEQIZDYDFCO-UHFFFAOYSA-N - 294.000 - 294.00000 - [Og] - PMID:10062781 - PMID:11486061 - PMID:19045133 - PMID:23913741 - PMID:36859080 - Wikipedia:Oganesson - chebi_ontology - 118Og - E118 - Og - Uuo - eka-emanation - eka-radon - element 118 - ununoctium - CHEBI:194541 + A p-block element atom with a symbol Og and atomic number 118. + 0 + InChI=1S/Og + GOANEQIZDYDFCO-UHFFFAOYSA-N + 294.000 + 294.00000 + [Og] + PMID:10062781 + PMID:11486061 + PMID:19045133 + PMID:23913741 + PMID:36859080 + Wikipedia:Oganesson + chebi_ontology + 118Og + E118 + Og + Uuo + eka-emanation + eka-radon + element 118 + ununoctium + CHEBI:194541 - oganesson atom + oganesson atom - PMID:10062781 + PMID:10062781 Europe PMC - PMID:11486061 + PMID:11486061 Europe PMC - PMID:19045133 + PMID:19045133 Europe PMC - PMID:23913741 + PMID:23913741 Europe PMC - PMID:36859080 + PMID:36859080 Europe PMC - 118Og + 118Og ChEBI - E118 + E118 ChEBI - Og + Og ChEBI - Uuo + Uuo ChEBI - eka-emanation + eka-emanation ChEBI - eka-radon + eka-radon ChEBI - element 118 + element 118 ChEBI - ununoctium + ununoctium ChEBI @@ -16651,80 +16642,80 @@ For example, A and B may be gene products and binding of B by A positively regul - alkaline earth metals - chebi_ontology - Erdalkalimetall - Erdalkalimetalle - alkaline earth metal - alkaline-earth metal - alkaline-earth metals - metal alcalino-terreux - metal alcalinoterreo - metales alcalinoterreos - metaux alcalino-terreux - CHEBI:22313 + alkaline earth metals + chebi_ontology + Erdalkalimetall + Erdalkalimetalle + alkaline earth metal + alkaline-earth metal + alkaline-earth metals + metal alcalino-terreux + metal alcalinoterreo + metales alcalinoterreos + metaux alcalino-terreux + CHEBI:22313 - alkaline earth metal atom + alkaline earth metal atom - alkaline earth metals + alkaline earth metals IUPAC - Erdalkalimetall + Erdalkalimetall ChEBI - Erdalkalimetalle + Erdalkalimetalle ChEBI - alkaline earth metal + alkaline earth metal ChEBI - alkaline-earth metal + alkaline-earth metal ChEBI - alkaline-earth metals + alkaline-earth metals ChEBI - metal alcalino-terreux + metal alcalino-terreux ChEBI - metal alcalinoterreo + metal alcalinoterreo ChEBI - metales alcalinoterreos + metales alcalinoterreos ChEBI - metaux alcalino-terreux + metaux alcalino-terreux ChEBI @@ -16736,66 +16727,66 @@ For example, A and B may be gene products and binding of B by A positively regul - alkali metals - chebi_ontology - Alkalimetall - Alkalimetalle - alkali metal - metal alcalin - metal alcalino - metales alcalinos - metaux alcalins - CHEBI:22314 + alkali metals + chebi_ontology + Alkalimetall + Alkalimetalle + alkali metal + metal alcalin + metal alcalino + metales alcalinos + metaux alcalins + CHEBI:22314 - alkali metal atom + alkali metal atom - alkali metals + alkali metals IUPAC - Alkalimetall + Alkalimetall ChEBI - Alkalimetalle + Alkalimetalle ChEBI - alkali metal + alkali metal ChEBI - metal alcalin + metal alcalin ChEBI - metal alcalino + metal alcalino ChEBI - metales alcalinos + metales alcalinos ChEBI - metaux alcalins + metaux alcalins ChEBI @@ -17153,74 +17144,74 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Br - InChI=1S/Br - WKBOTKDWSSQWDR-UHFFFAOYSA-N - 79.90400 - 78.91834 - [Br] - WebElements:Br - bromine - chebi_ontology - 35Br - Br - Brom - brome - bromine - bromo - bromum - CHEBI:22927 + 0 + Br + InChI=1S/Br + WKBOTKDWSSQWDR-UHFFFAOYSA-N + 79.90400 + 78.91834 + [Br] + WebElements:Br + bromine + chebi_ontology + 35Br + Br + Brom + brome + bromine + bromo + bromum + CHEBI:22927 - bromine atom + bromine atom - bromine + bromine IUPAC - 35Br + 35Br IUPAC - Br + Br ChEBI - Brom + Brom ChEBI - brome + brome ChEBI - bromine + bromine ChEBI - bromo + bromo ChEBI - bromum + bromum ChEBI @@ -17230,80 +17221,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Cd - InChI=1S/Cd - BDOSMKKIYDKNTQ-UHFFFAOYSA-N - 112.41100 - 113.90336 - [Cd] - CAS:7440-43-9 - KEGG:C01413 - WebElements:Cd - cadmium - chebi_ontology - 48Cd - Cd - Kadmium - cadmio - cadmium - CHEBI:22977 + 0 + Cd + InChI=1S/Cd + BDOSMKKIYDKNTQ-UHFFFAOYSA-N + 112.41100 + 113.90336 + [Cd] + CAS:7440-43-9 + KEGG:C01413 + WebElements:Cd + cadmium + chebi_ontology + 48Cd + Cd + Kadmium + cadmio + cadmium + CHEBI:22977 - cadmium atom + cadmium atom - CAS:7440-43-9 + CAS:7440-43-9 ChemIDplus - CAS:7440-43-9 + CAS:7440-43-9 KEGG COMPOUND - CAS:7440-43-9 + CAS:7440-43-9 NIST Chemistry WebBook - cadmium + cadmium IUPAC - 48Cd + 48Cd IUPAC - Cd + Cd IUPAC - Kadmium - NIST_Chemistry_WebBook + Kadmium + NIST_Chemistry_WebBook - cadmio + cadmio ChEBI - cadmium + cadmium ChEBI @@ -17313,82 +17304,82 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ca - InChI=1S/Ca - OYPRJOBELJOOCE-UHFFFAOYSA-N - 40.07800 - 39.96259 - [Ca] - CAS:7440-70-2 - DrugBank:DB01373 - KEGG:C00076 - WebElements:Ca - calcium - chebi_ontology - 20Ca - Ca - Calcium - Kalzium - calcio - calcium - CHEBI:22984 + 0 + Ca + InChI=1S/Ca + OYPRJOBELJOOCE-UHFFFAOYSA-N + 40.07800 + 39.96259 + [Ca] + CAS:7440-70-2 + DrugBank:DB01373 + KEGG:C00076 + WebElements:Ca + calcium + chebi_ontology + 20Ca + Ca + Calcium + Kalzium + calcio + calcium + CHEBI:22984 - calcium atom + calcium atom - CAS:7440-70-2 + CAS:7440-70-2 ChemIDplus - calcium + calcium IUPAC - 20Ca + 20Ca IUPAC - Ca + Ca IUPAC - Ca + Ca UniProt - Calcium + Calcium KEGG_COMPOUND - Kalzium + Kalzium ChEBI - calcio + calcio ChEBI - calcium + calcium ChEBI @@ -17544,74 +17535,74 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Cl - InChI=1S/Cl - ZAMOUSCENKQFHK-UHFFFAOYSA-N - 35.45270 - 34.96885 - [Cl] - WebElements:Cl - chlorine - chebi_ontology - 17Cl - Chlor - Cl - chlore - chlorine - chlorum - cloro - CHEBI:23116 + 0 + Cl + InChI=1S/Cl + ZAMOUSCENKQFHK-UHFFFAOYSA-N + 35.45270 + 34.96885 + [Cl] + WebElements:Cl + chlorine + chebi_ontology + 17Cl + Chlor + Cl + chlore + chlorine + chlorum + cloro + CHEBI:23116 - chlorine atom + chlorine atom - chlorine + chlorine IUPAC - 17Cl + 17Cl IUPAC - Chlor + Chlor ChEBI - Cl + Cl IUPAC - chlore + chlore ChEBI - chlorine + chlorine ChEBI - chlorum + chlorum ChEBI - cloro + cloro ChEBI @@ -17866,74 +17857,74 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - F - InChI=1S/F - YCKRFDGAMUMZLT-UHFFFAOYSA-N - 18.99840 - 18.99840 - [F] - CAS:7782-41-4 - WebElements:F - fluorine - chebi_ontology - 9F - F - Fluor - fluor - fluorine - fluorum - CHEBI:24061 + 0 + F + InChI=1S/F + YCKRFDGAMUMZLT-UHFFFAOYSA-N + 18.99840 + 18.99840 + [F] + CAS:7782-41-4 + WebElements:F + fluorine + chebi_ontology + 9F + F + Fluor + fluor + fluorine + fluorum + CHEBI:24061 - fluorine atom + fluorine atom - CAS:7782-41-4 + CAS:7782-41-4 ChemIDplus - fluorine + fluorine IUPAC - 9F + 9F IUPAC - F + F IUPAC - Fluor + Fluor ChemIDplus - fluor + fluor ChEBI - fluorine + fluorine ChEBI - fluorum + fluorum ChEBI @@ -18068,74 +18059,74 @@ For example, A and B may be gene products and binding of B by A positively regul - halogen - halogens - chebi_ontology - Halogene - group 17 elements - group VII elements - halogene - halogenes - halogeno - halogenos - CHEBI:24473 + halogen + halogens + chebi_ontology + Halogene + group 17 elements + group VII elements + halogene + halogenes + halogeno + halogenos + CHEBI:24473 - halogen + halogen - halogen + halogen IUPAC - halogens + halogens IUPAC - Halogene + Halogene ChEBI - group 17 elements + group 17 elements ChEBI - group VII elements + group VII elements ChEBI - halogene + halogene ChEBI - halogenes + halogenes ChEBI - halogeno + halogeno ChEBI - halogenos + halogenos ChEBI @@ -18558,89 +18549,89 @@ For example, A and B may be gene products and binding of B by A positively regul - Chemical element with atomic number 53. - 0 - I - InChI=1S/I - ZCYVEMRRCGMTRW-UHFFFAOYSA-N - 126.90447 - 126.90447 - [I] - WebElements:I - iodine - chebi_ontology - 53I - I - Iod - J - Jod - iode - iodine - iodium - yodo - CHEBI:24859 + Chemical element with atomic number 53. + 0 + I + InChI=1S/I + ZCYVEMRRCGMTRW-UHFFFAOYSA-N + 126.90447 + 126.90447 + [I] + WebElements:I + iodine + chebi_ontology + 53I + I + Iod + J + Jod + iode + iodine + iodium + yodo + CHEBI:24859 - iodine atom + iodine atom - iodine + iodine IUPAC - 53I + 53I IUPAC - I + I ChEBI - Iod + Iod ChEBI - J + J ChEBI - Jod + Jod ChEBI - iode + iode ChEBI - iodine + iodine ChEBI - iodium + iodium ChEBI - yodo + yodo ChEBI @@ -18860,75 +18851,75 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Pb - InChI=1S/Pb - WABPQHHGFIMREM-UHFFFAOYSA-N - 207.20000 - 207.97665 - [Pb] - KEGG:C06696 - WebElements:Pb - lead - chebi_ontology - 82Pb - Blei - Pb - lead - plomb - plomo - plumbum - CHEBI:25016 + 0 + Pb + InChI=1S/Pb + WABPQHHGFIMREM-UHFFFAOYSA-N + 207.20000 + 207.97665 + [Pb] + KEGG:C06696 + WebElements:Pb + lead + chebi_ontology + 82Pb + Blei + Pb + lead + plomb + plomo + plumbum + CHEBI:25016 - lead atom + lead atom - lead + lead IUPAC - 82Pb + 82Pb IUPAC - Blei + Blei ChEBI - Pb + Pb IUPAC - lead + lead ChEBI - plomb + plomb ChEBI - plomo + plomo ChEBI - plumbum + plumbum IUPAC @@ -18950,82 +18941,82 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Mg - InChI=1S/Mg - FYYHWMGAXLPEAU-UHFFFAOYSA-N - 24.30500 - 23.98504 - [Mg] - CAS:7439-95-4 - DrugBank:DB01378 - Gmelin:16207 - KEGG:C00305 - WebElements:Mg - magnesium - chebi_ontology - 12Mg - Magnesium - Mg - magnesio - magnesium - CHEBI:25107 + 0 + Mg + InChI=1S/Mg + FYYHWMGAXLPEAU-UHFFFAOYSA-N + 24.30500 + 23.98504 + [Mg] + CAS:7439-95-4 + DrugBank:DB01378 + Gmelin:16207 + KEGG:C00305 + WebElements:Mg + magnesium + chebi_ontology + 12Mg + Magnesium + Mg + magnesio + magnesium + CHEBI:25107 - magnesium atom + magnesium atom - CAS:7439-95-4 + CAS:7439-95-4 ChemIDplus - Gmelin:16207 + Gmelin:16207 Gmelin - magnesium + magnesium IUPAC - 12Mg + 12Mg IUPAC - Magnesium + Magnesium ChEBI - Mg + Mg IUPAC - Mg + Mg UniProt - magnesio + magnesio ChEBI - magnesium + magnesium ChEBI @@ -19035,102 +19026,102 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Hg - InChI=1S/Hg - QSHDDOUJBYECFT-UHFFFAOYSA-N - 200.59000 - 201.97064 - [Hg] - CAS:7439-97-6 - WebElements:Hg - mercury - chebi_ontology - 80Hg - Hg - Quecksilber - azogue - hydrargyrum - liquid silver - mercure - mercurio - mercury - quicksilver - CHEBI:25195 + 0 + Hg + InChI=1S/Hg + QSHDDOUJBYECFT-UHFFFAOYSA-N + 200.59000 + 201.97064 + [Hg] + CAS:7439-97-6 + WebElements:Hg + mercury + chebi_ontology + 80Hg + Hg + Quecksilber + azogue + hydrargyrum + liquid silver + mercure + mercurio + mercury + quicksilver + CHEBI:25195 - mercury atom + mercury atom - CAS:7439-97-6 + CAS:7439-97-6 ChemIDplus - mercury + mercury IUPAC - 80Hg + 80Hg IUPAC - Hg + Hg IUPAC - Quecksilber + Quecksilber ChemIDplus - azogue + azogue ChEBI - hydrargyrum + hydrargyrum IUPAC - liquid silver + liquid silver ChemIDplus - mercure + mercure ChemIDplus - mercurio + mercurio ChEBI - mercury + mercury ChEBI - quicksilver + quicksilver ChemIDplus @@ -20145,76 +20136,76 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - K - InChI=1S/K - ZLMJMSJWJFRBEC-UHFFFAOYSA-N - 39.09830 - 38.96371 - [K] - CAS:7440-09-7 - DrugBank:DB01345 - KEGG:C00238 - WebElements:K - potassium - chebi_ontology - 19K - K - Kalium - kalium - potasio - potassium - CHEBI:26216 + 0 + K + InChI=1S/K + ZLMJMSJWJFRBEC-UHFFFAOYSA-N + 39.09830 + 38.96371 + [K] + CAS:7440-09-7 + DrugBank:DB01345 + KEGG:C00238 + WebElements:K + potassium + chebi_ontology + 19K + K + Kalium + kalium + potasio + potassium + CHEBI:26216 - potassium atom + potassium atom - CAS:7440-09-7 + CAS:7440-09-7 ChemIDplus - potassium + potassium IUPAC - 19K + 19K IUPAC - K + K IUPAC - Kalium + Kalium ChemIDplus - kalium + kalium IUPAC - potasio + potasio ChEBI - potassium + potassium ChEBI @@ -20236,82 +20227,82 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Na - InChI=1S/Na - KEAYESYHFKHZAL-UHFFFAOYSA-N - 22.98977 - 22.98977 - [Na] - CAS:7440-23-5 - Gmelin:16221 - KEGG:C01330 - WebElements:Na - sodium - chebi_ontology - 11Na - Na - Natrium - natrium - sodio - sodium - CHEBI:26708 + 0 + Na + InChI=1S/Na + KEAYESYHFKHZAL-UHFFFAOYSA-N + 22.98977 + 22.98977 + [Na] + CAS:7440-23-5 + Gmelin:16221 + KEGG:C01330 + WebElements:Na + sodium + chebi_ontology + 11Na + Na + Natrium + natrium + sodio + sodium + CHEBI:26708 - sodium atom + sodium atom - CAS:7440-23-5 + CAS:7440-23-5 ChemIDplus - Gmelin:16221 + Gmelin:16221 Gmelin - sodium + sodium IUPAC - 11Na + 11Na IUPAC - Na + Na IUPAC - Natrium + Natrium ChemIDplus - natrium + natrium IUPAC - sodio + sodio ChemIDplus - sodium + sodium ChEBI @@ -20553,116 +20544,116 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - S - InChI=1S/S - NINIDFKCEFEMDL-UHFFFAOYSA-N - 32.06600 - 31.97207 - [S] - CAS:7704-34-9 - KEGG:C00087 - KEGG:D06527 - PPDB:605 - WebElements:S - sulfur - chebi_ontology - 16S - Elemental sulfur - S - Schwefel - azufre - soufre - sulfur - sulphur - theion - CHEBI:26833 + 0 + S + InChI=1S/S + NINIDFKCEFEMDL-UHFFFAOYSA-N + 32.06600 + 31.97207 + [S] + CAS:7704-34-9 + KEGG:C00087 + KEGG:D06527 + PPDB:605 + WebElements:S + sulfur + chebi_ontology + 16S + Elemental sulfur + S + Schwefel + azufre + soufre + sulfur + sulphur + theion + CHEBI:26833 - sulfur atom + sulfur atom - CAS:7704-34-9 + CAS:7704-34-9 ChemIDplus - CAS:7704-34-9 + CAS:7704-34-9 NIST Chemistry WebBook - sulfur + sulfur IUPAC - 16S + 16S IUPAC - Elemental sulfur + Elemental sulfur KEGG_COMPOUND - S + S IUPAC - S + S KEGG_COMPOUND - Schwefel + Schwefel ChEBI - azufre + azufre ChEBI - soufre + soufre ChEBI - sulfur + sulfur ChEBI - sulfur + sulfur UniProt - sulphur + sulphur ChEBI - theion + theion IUPAC @@ -21000,88 +20991,88 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Sn - InChI=1S/Sn - ATJFFYVFTNAWJD-UHFFFAOYSA-N - 118.71000 - 119.90220 - [Sn] - CAS:7440-31-5 - UM-BBD_compID:c0585 - WebElements:Sn - tin - chebi_ontology - 50Sn - Sn - Zinn - estano - etain - stannum - tin - CHEBI:27007 + 0 + Sn + InChI=1S/Sn + ATJFFYVFTNAWJD-UHFFFAOYSA-N + 118.71000 + 119.90220 + [Sn] + CAS:7440-31-5 + UM-BBD_compID:c0585 + WebElements:Sn + tin + chebi_ontology + 50Sn + Sn + Zinn + estano + etain + stannum + tin + CHEBI:27007 - tin atom + tin atom - CAS:7440-31-5 + CAS:7440-31-5 ChemIDplus - UM-BBD_compID:c0585 - UM-BBD + UM-BBD_compID:c0585 + UM-BBD - tin + tin IUPAC - 50Sn + 50Sn IUPAC - Sn + Sn IUPAC - Zinn + Zinn ChemIDplus - estano + estano ChEBI - etain + etain ChEBI - stannum + stannum IUPAC - tin + tin ChEBI @@ -21119,9 +21110,9 @@ For example, A and B may be gene products and binding of B by A positively regul - An element whose atom has an incomplete d sub-shell, or which can give rise to cations with an incomplete d sub-shell. + An element whose atom has an incomplete d sub-shell, or which can give rise to cations with an incomplete d sub-shell. transition element - chebi_ontology + chebi_ontology Uebergangselement Uebergangsmetalle metal de transicion @@ -21132,9 +21123,9 @@ For example, A and B may be gene products and binding of B by A positively regul transition elements transition metal transition metals - CHEBI:27081 + CHEBI:27081 - transition element atom + transition element atom @@ -21284,67 +21275,67 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - U - InChI=1S/U - JFALSRSLKYAFGM-UHFFFAOYSA-N - 238.02890 - 238.05079 - [U] - CAS:7440-61-1 - WebElements:U - uranium - chebi_ontology - 92U - U - Uran - uranio - uranium - CHEBI:27214 + 0 + U + InChI=1S/U + JFALSRSLKYAFGM-UHFFFAOYSA-N + 238.02890 + 238.05079 + [U] + CAS:7440-61-1 + WebElements:U + uranium + chebi_ontology + 92U + U + Uran + uranio + uranium + CHEBI:27214 - uranium atom + uranium atom - CAS:7440-61-1 + CAS:7440-61-1 ChemIDplus - uranium + uranium IUPAC - 92U + 92U IUPAC - U + U IUPAC - Uran + Uran ChEBI - uranio + uranio ChEBI - uranium + uranium ChEBI @@ -21354,103 +21345,103 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Zn - InChI=1S/Zn - HCHKCACWOHOZIP-UHFFFAOYSA-N - 65.39000 - 63.92914 - [Zn] - CAS:7440-66-6 - Gmelin:16321 - KEGG:C00038 - PDBeChem:ZN - WebElements:Zn - zinc - chebi_ontology - 30Zn - Zink - Zn - Zn(II) - Zn2+ - cinc - zinc - zincum - CHEBI:27363 + 0 + Zn + InChI=1S/Zn + HCHKCACWOHOZIP-UHFFFAOYSA-N + 65.39000 + 63.92914 + [Zn] + CAS:7440-66-6 + Gmelin:16321 + KEGG:C00038 + PDBeChem:ZN + WebElements:Zn + zinc + chebi_ontology + 30Zn + Zink + Zn + Zn(II) + Zn2+ + cinc + zinc + zincum + CHEBI:27363 - zinc atom + zinc atom - CAS:7440-66-6 + CAS:7440-66-6 ChemIDplus - CAS:7440-66-6 + CAS:7440-66-6 KEGG COMPOUND - Gmelin:16321 + Gmelin:16321 Gmelin - zinc + zinc IUPAC - 30Zn + 30Zn IUPAC - Zink + Zink ChEBI - Zn + Zn IUPAC - Zn(II) + Zn(II) KEGG_COMPOUND - Zn2+ + Zn2+ KEGG_COMPOUND - cinc + cinc ChEBI - zinc + zinc ChEBI - zincum + zincum ChEBI @@ -21519,97 +21510,97 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - B - InChI=1S/B - ZOXJGFHDIHLPTG-UHFFFAOYSA-N - 10.81100 - 11.00930 - [B] - CHEBI:22915 - CHEBI:3152 - CAS:7440-42-8 - KEGG:C06266 - WebElements:B - boron - chebi_ontology - 5B - B - Bor - Boron - boracium - bore - boro - boron - CHEBI:27560 + 0 + B + InChI=1S/B + ZOXJGFHDIHLPTG-UHFFFAOYSA-N + 10.81100 + 11.00930 + [B] + CHEBI:22915 + CHEBI:3152 + CAS:7440-42-8 + KEGG:C06266 + WebElements:B + boron + chebi_ontology + 5B + B + Bor + Boron + boracium + bore + boro + boron + CHEBI:27560 - boron atom + boron atom - CAS:7440-42-8 + CAS:7440-42-8 ChemIDplus - CAS:7440-42-8 + CAS:7440-42-8 KEGG COMPOUND - boron + boron IUPAC - 5B + 5B IUPAC - B + B KEGG_COMPOUND - Bor + Bor ChEBI - Boron + Boron KEGG_COMPOUND - boracium + boracium ChEBI - bore + bore ChEBI - boro + boro ChEBI - boron + boron ChEBI @@ -21620,90 +21611,90 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - As - InChI=1S/As - RQNWIZPPADIBDY-UHFFFAOYSA-N - 74.92160 - 74.92159 - [As] - CHEBI:22630 - CHEBI:2845 - CAS:7440-38-2 - KEGG:C06269 - WebElements:As - arsenic - chebi_ontology - 33As - Arsen - Arsenic - As - arsenic - arsenico - arsenicum - CHEBI:27563 + 0 + As + InChI=1S/As + RQNWIZPPADIBDY-UHFFFAOYSA-N + 74.92160 + 74.92159 + [As] + CHEBI:22630 + CHEBI:2845 + CAS:7440-38-2 + KEGG:C06269 + WebElements:As + arsenic + chebi_ontology + 33As + Arsen + Arsenic + As + arsenic + arsenico + arsenicum + CHEBI:27563 - arsenic atom + arsenic atom - CAS:7440-38-2 + CAS:7440-38-2 ChemIDplus - CAS:7440-38-2 + CAS:7440-38-2 KEGG COMPOUND - arsenic + arsenic IUPAC - 33As + 33As IUPAC - Arsen + Arsen ChemIDplus - Arsenic + Arsenic KEGG_COMPOUND - As + As KEGG_COMPOUND - arsenic + arsenic ChEBI - arsenico + arsenico ChEBI - arsenicum + arsenicum ChEBI @@ -21714,87 +21705,87 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Se - InChI=1S/Se - BUGBHKTXTAQXES-UHFFFAOYSA-N - 78.96000 - 79.91652 - [Se] - CHEBI:26627 - CHEBI:9091 - CAS:7782-49-2 - DrugBank:DB11135 - FooDB:FDB013400 - HMDB:HMDB0001349 - KEGG:C01529 - WebElements:Se - Wikipedia:Selenium - selenium - chebi_ontology - 34Se - Se - Selen - Selenium - selenio - selenium - CHEBI:27568 + 0 + Se + InChI=1S/Se + BUGBHKTXTAQXES-UHFFFAOYSA-N + 78.96000 + 79.91652 + [Se] + CHEBI:26627 + CHEBI:9091 + CAS:7782-49-2 + DrugBank:DB11135 + FooDB:FDB013400 + HMDB:HMDB0001349 + KEGG:C01529 + WebElements:Se + Wikipedia:Selenium + selenium + chebi_ontology + 34Se + Se + Selen + Selenium + selenio + selenium + CHEBI:27568 - selenium atom + selenium atom - CAS:7782-49-2 + CAS:7782-49-2 ChemIDplus - CAS:7782-49-2 + CAS:7782-49-2 NIST Chemistry WebBook - selenium + selenium IUPAC - 34Se + 34Se IUPAC - Se + Se IUPAC - Selen + Selen ChemIDplus - Selenium + Selenium KEGG_COMPOUND - selenio + selenio ChEBI - selenium + selenium ChEBI @@ -21806,90 +21797,90 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Si - InChI=1S/Si - XUIMIQQOPSSXEZ-UHFFFAOYSA-N - 28.08550 - 27.97693 - [Si] - CHEBI:26676 - CHEBI:9140 - CAS:7440-21-3 - KEGG:C06263 - WebElements:Si - silicon - chebi_ontology - 14Si - Si - Silicon - Silizium - silicio - silicium - silicon - CHEBI:27573 + 0 + Si + InChI=1S/Si + XUIMIQQOPSSXEZ-UHFFFAOYSA-N + 28.08550 + 27.97693 + [Si] + CHEBI:26676 + CHEBI:9140 + CAS:7440-21-3 + KEGG:C06263 + WebElements:Si + silicon + chebi_ontology + 14Si + Si + Silicon + Silizium + silicio + silicium + silicon + CHEBI:27573 - silicon atom + silicon atom - CAS:7440-21-3 + CAS:7440-21-3 ChemIDplus - silicon + silicon IUPAC - 14Si + 14Si IUPAC - Si + Si IUPAC - Si + Si KEGG_COMPOUND - Silicon + Silicon KEGG_COMPOUND - Silizium + Silizium ChEBI - silicio + silicio ChEBI - silicium + silicium ChEBI - silicon + silicon ChEBI @@ -22013,105 +22004,105 @@ For example, A and B may be gene products and binding of B by A positively regul - A cobalt group element atom that has atomic number 27. - 0 - Co - InChI=1S/Co - GUTLYIVDDKVIGB-UHFFFAOYSA-N - 58.93320 - 58.93319 - [Co] - CHEBI:23335 - CHEBI:3788 - CAS:7440-48-4 - KEGG:C00175 - KEGG:C19171 - PDBeChem:3CO - WebElements:Co - cobalt - chebi_ontology - 27Co - Co - Cobalt - Kobalt - cobalt - cobalto - cobaltum - CHEBI:27638 + A cobalt group element atom that has atomic number 27. + 0 + Co + InChI=1S/Co + GUTLYIVDDKVIGB-UHFFFAOYSA-N + 58.93320 + 58.93319 + [Co] + CHEBI:23335 + CHEBI:3788 + CAS:7440-48-4 + KEGG:C00175 + KEGG:C19171 + PDBeChem:3CO + WebElements:Co + cobalt + chebi_ontology + 27Co + Co + Cobalt + Kobalt + cobalt + cobalto + cobaltum + CHEBI:27638 - cobalt atom + cobalt atom - CAS:7440-48-4 + CAS:7440-48-4 ChemIDplus - CAS:7440-48-4 + CAS:7440-48-4 KEGG COMPOUND - CAS:7440-48-4 + CAS:7440-48-4 NIST Chemistry WebBook - cobalt + cobalt IUPAC - 27Co + 27Co IUPAC - Co + Co IUPAC - Co + Co UniProt - Cobalt + Cobalt KEGG_COMPOUND - Kobalt - NIST_Chemistry_WebBook + Kobalt + NIST_Chemistry_WebBook - cobalt + cobalt ChEBI - cobalto + cobalto ChEBI - cobaltum + cobaltum ChEBI @@ -22121,88 +22112,88 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - V - InChI=1S/V - LEONUFNNVUYDNQ-UHFFFAOYSA-N - 50.94150 - 50.94396 - [V] - CHEBI:27274 - CHEBI:9930 - CAS:7440-62-2 - KEGG:C06267 - WebElements:V - vanadium - chebi_ontology - 23V - V - Vanadium - vanadio - vanadium - CHEBI:27698 + 0 + V + InChI=1S/V + LEONUFNNVUYDNQ-UHFFFAOYSA-N + 50.94150 + 50.94396 + [V] + CHEBI:27274 + CHEBI:9930 + CAS:7440-62-2 + KEGG:C06267 + WebElements:V + vanadium + chebi_ontology + 23V + V + Vanadium + vanadio + vanadium + CHEBI:27698 - vanadium atom + vanadium atom - CAS:7440-62-2 + CAS:7440-62-2 ChemIDplus - CAS:7440-62-2 + CAS:7440-62-2 KEGG COMPOUND - CAS:7440-62-2 + CAS:7440-62-2 NIST Chemistry WebBook - vanadium + vanadium IUPAC - 23V + 23V IUPAC - V + V IUPAC - V + V KEGG_COMPOUND - Vanadium + Vanadium KEGG_COMPOUND - vanadio + vanadio ChEBI - vanadium + vanadium ChEBI @@ -22212,139 +22203,139 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - W - InChI=1S/W - WFKWXMTUELFFGS-UHFFFAOYSA-N - 183.84000 - 183.95093 - [W] - CHEBI:27170 - CHEBI:9779 - CAS:7440-33-7 - Gmelin:16317 - KEGG:C00753 - PDBeChem:W - WebElements:W - Tungsten - tungsten - wolfram - chebi_ontology - 74W - W - Wolfram - tungsten atom - tungstene - tungsteno - volframio - wolframio - wolframium - CHEBI:27998 + 0 + W + InChI=1S/W + WFKWXMTUELFFGS-UHFFFAOYSA-N + 183.84000 + 183.95093 + [W] + CHEBI:27170 + CHEBI:9779 + CAS:7440-33-7 + Gmelin:16317 + KEGG:C00753 + PDBeChem:W + WebElements:W + Tungsten + tungsten + wolfram + chebi_ontology + 74W + W + Wolfram + tungsten atom + tungstene + tungsteno + volframio + wolframio + wolframium + CHEBI:27998 - tungsten + tungsten - CAS:7440-33-7 + CAS:7440-33-7 ChemIDplus - CAS:7440-33-7 + CAS:7440-33-7 KEGG COMPOUND - CAS:7440-33-7 + CAS:7440-33-7 NIST Chemistry WebBook - Gmelin:16317 + Gmelin:16317 Gmelin - Tungsten + Tungsten KEGG_COMPOUND - tungsten + tungsten IUPAC - wolfram + wolfram IUPAC - 74W + 74W IUPAC - W + W IUPAC - W + W UniProt - Wolfram - NIST_Chemistry_WebBook + Wolfram + NIST_Chemistry_WebBook - tungsten atom + tungsten atom ChEBI - tungstene + tungstene ChEBI - tungsteno + tungsteno ChEBI - volframio + volframio ChEBI - wolframio + wolframio ChEBI - wolframium + wolframium ChEBI @@ -22355,97 +22346,97 @@ For example, A and B may be gene products and binding of B by A positively regul - A chromium group element atom that has atomic number 24. - 0 - Cr - InChI=1S/Cr - VYZAMTAEIAYCRO-UHFFFAOYSA-N - 51.99610 - 51.94051 - [Cr] - CHEBI:23235 - CHEBI:3678 - CAS:7440-47-3 - KEGG:C06268 - WebElements:Cr - chromium - chebi_ontology - 24Cr - Chrom - Chromium - Cr - chrome - chromium - cromo - CHEBI:28073 + A chromium group element atom that has atomic number 24. + 0 + Cr + InChI=1S/Cr + VYZAMTAEIAYCRO-UHFFFAOYSA-N + 51.99610 + 51.94051 + [Cr] + CHEBI:23235 + CHEBI:3678 + CAS:7440-47-3 + KEGG:C06268 + WebElements:Cr + chromium + chebi_ontology + 24Cr + Chrom + Chromium + Cr + chrome + chromium + cromo + CHEBI:28073 - chromium atom + chromium atom - CAS:7440-47-3 + CAS:7440-47-3 ChemIDplus - CAS:7440-47-3 + CAS:7440-47-3 KEGG COMPOUND - chromium + chromium IUPAC - 24Cr + 24Cr IUPAC - Chrom + Chrom ChemIDplus - Chromium + Chromium KEGG_COMPOUND - Cr + Cr IUPAC - Cr + Cr KEGG_COMPOUND - chrome + chrome ChEBI - chromium + chromium ChEBI - cromo + cromo ChEBI @@ -22530,244 +22521,244 @@ For example, A and B may be gene products and binding of B by A positively regul - Chemical element (nickel group element atom) with atomic number 28. - 0 - Ni - InChI=1S/Ni - PXHVJJICTQNCMI-UHFFFAOYSA-N - 58.69340 - 57.93534 - [Ni] - CHEBI:25515 - CHEBI:7552 - CAS:7440-02-0 - Gmelin:16229 - KEGG:C00291 - PMID:12756270 - PMID:14634084 - PMID:14734778 - PMID:15165199 - PMID:19828094 - PMID:20477134 - PMID:22762130 - PMID:23142754 - PMID:23317102 - PMID:23692032 - PMID:23692035 - PMID:23723488 - PMID:23834453 - PMID:23857010 - PMID:23895079 - PMID:23909687 - PMID:9060994 - PMID:9886425 - Reaxys:4122946 - WebElements:Ni - Wikipedia:Nickel - nickel - chebi_ontology - 28Ni - Ni - Nickel - Raney alloy - niccolum - nickel - niquel - CHEBI:28112 + Chemical element (nickel group element atom) with atomic number 28. + 0 + Ni + InChI=1S/Ni + PXHVJJICTQNCMI-UHFFFAOYSA-N + 58.69340 + 57.93534 + [Ni] + CHEBI:25515 + CHEBI:7552 + CAS:7440-02-0 + Gmelin:16229 + KEGG:C00291 + PMID:12756270 + PMID:14634084 + PMID:14734778 + PMID:15165199 + PMID:19828094 + PMID:20477134 + PMID:22762130 + PMID:23142754 + PMID:23317102 + PMID:23692032 + PMID:23692035 + PMID:23723488 + PMID:23834453 + PMID:23857010 + PMID:23895079 + PMID:23909687 + PMID:9060994 + PMID:9886425 + Reaxys:4122946 + WebElements:Ni + Wikipedia:Nickel + nickel + chebi_ontology + 28Ni + Ni + Nickel + Raney alloy + niccolum + nickel + niquel + CHEBI:28112 - nickel atom + nickel atom - CAS:7440-02-0 + CAS:7440-02-0 ChemIDplus - CAS:7440-02-0 + CAS:7440-02-0 KEGG COMPOUND - CAS:7440-02-0 + CAS:7440-02-0 NIST Chemistry WebBook - Gmelin:16229 + Gmelin:16229 Gmelin - PMID:12756270 + PMID:12756270 Europe PMC - PMID:14634084 + PMID:14634084 Europe PMC - PMID:14734778 + PMID:14734778 Europe PMC - PMID:15165199 + PMID:15165199 Europe PMC - PMID:19828094 + PMID:19828094 Europe PMC - PMID:20477134 + PMID:20477134 Europe PMC - PMID:22762130 + PMID:22762130 Europe PMC - PMID:23142754 + PMID:23142754 Europe PMC - PMID:23317102 + PMID:23317102 Europe PMC - PMID:23692032 + PMID:23692032 Europe PMC - PMID:23692035 + PMID:23692035 Europe PMC - PMID:23723488 + PMID:23723488 Europe PMC - PMID:23834453 + PMID:23834453 Europe PMC - PMID:23857010 + PMID:23857010 Europe PMC - PMID:23895079 + PMID:23895079 Europe PMC - PMID:23909687 + PMID:23909687 Europe PMC - PMID:9060994 + PMID:9060994 Europe PMC - PMID:9886425 + PMID:9886425 Europe PMC - Reaxys:4122946 + Reaxys:4122946 Reaxys - nickel + nickel IUPAC - 28Ni + 28Ni IUPAC - Ni + Ni IUPAC - Ni + Ni UniProt - Nickel + Nickel ChEBI - Raney alloy + Raney alloy ChemIDplus - niccolum + niccolum ChEBI - nickel + nickel ChEBI - niquel + niquel ChEBI @@ -22903,103 +22894,103 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - P - InChI=1S/P - OAICVXFJPJFONN-UHFFFAOYSA-N - 30.97376 - 30.97376 - [P] - CHEBI:26080 - CHEBI:8168 - CAS:7723-14-0 - Gmelin:16235 - KEGG:C06262 - WebElements:P - phosphorus - chebi_ontology - 15P - P - Phosphor - Phosphorus - fosforo - phosphore - phosphorus - CHEBI:28659 + 0 + P + InChI=1S/P + OAICVXFJPJFONN-UHFFFAOYSA-N + 30.97376 + 30.97376 + [P] + CHEBI:26080 + CHEBI:8168 + CAS:7723-14-0 + Gmelin:16235 + KEGG:C06262 + WebElements:P + phosphorus + chebi_ontology + 15P + P + Phosphor + Phosphorus + fosforo + phosphore + phosphorus + CHEBI:28659 - phosphorus atom + phosphorus atom - CAS:7723-14-0 + CAS:7723-14-0 ChemIDplus - CAS:7723-14-0 + CAS:7723-14-0 KEGG COMPOUND - Gmelin:16235 + Gmelin:16235 Gmelin - phosphorus + phosphorus IUPAC - 15P + 15P IUPAC - P + P IUPAC - P + P KEGG_COMPOUND - Phosphor + Phosphor ChEBI - Phosphorus + Phosphorus KEGG_COMPOUND - fosforo + fosforo ChEBI - phosphore + phosphore ChEBI - phosphorus + phosphorus ChEBI @@ -23009,110 +23000,110 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Mo - InChI=1S/Mo - ZOKXTWBITQBERF-UHFFFAOYSA-N - 95.94000 - 97.90541 - [Mo] - CHEBI:25369 - CHEBI:49750 - CHEBI:6968 - CAS:7439-98-7 - Gmelin:16205 - KEGG:C00150 - WebElements:Mo - molybdenum - chebi_ontology - 42Mo - Mo - Molybdaen - Molybdenum - molibdeno - molybdene - molybdenum - CHEBI:28685 + 0 + Mo + InChI=1S/Mo + ZOKXTWBITQBERF-UHFFFAOYSA-N + 95.94000 + 97.90541 + [Mo] + CHEBI:25369 + CHEBI:49750 + CHEBI:6968 + CAS:7439-98-7 + Gmelin:16205 + KEGG:C00150 + WebElements:Mo + molybdenum + chebi_ontology + 42Mo + Mo + Molybdaen + Molybdenum + molibdeno + molybdene + molybdenum + CHEBI:28685 - molybdenum atom + molybdenum atom - CAS:7439-98-7 + CAS:7439-98-7 ChemIDplus - CAS:7439-98-7 + CAS:7439-98-7 KEGG COMPOUND - CAS:7439-98-7 + CAS:7439-98-7 NIST Chemistry WebBook - Gmelin:16205 + Gmelin:16205 Gmelin - molybdenum + molybdenum IUPAC - 42Mo + 42Mo IUPAC - Mo + Mo IUPAC - Mo + Mo UniProt - Molybdaen + Molybdaen ChEBI - Molybdenum + Molybdenum KEGG_COMPOUND - molibdeno + molibdeno ChEBI - molybdene + molybdene ChEBI - molybdenum + molybdenum ChEBI @@ -23123,110 +23114,110 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Cu - InChI=1S/Cu - RYGMFSIKBFXOCR-UHFFFAOYSA-N - 63.54600 - 62.92960 - [Cu] - CHEBI:23376 - CHEBI:3874 - CAS:7440-50-8 - Gmelin:16269 - KEGG:C00070 - WebElements:Cu - copper - chebi_ontology - 29Cu - Copper - Cu - Kupfer - cobre - copper - cuivre - cuprum - CHEBI:28694 + 0 + Cu + InChI=1S/Cu + RYGMFSIKBFXOCR-UHFFFAOYSA-N + 63.54600 + 62.92960 + [Cu] + CHEBI:23376 + CHEBI:3874 + CAS:7440-50-8 + Gmelin:16269 + KEGG:C00070 + WebElements:Cu + copper + chebi_ontology + 29Cu + Copper + Cu + Kupfer + cobre + copper + cuivre + cuprum + CHEBI:28694 - copper atom + copper atom - CAS:7440-50-8 + CAS:7440-50-8 ChemIDplus - CAS:7440-50-8 + CAS:7440-50-8 KEGG COMPOUND - Gmelin:16269 + Gmelin:16269 Gmelin - copper + copper IUPAC - 29Cu + 29Cu IUPAC - Copper + Copper KEGG_COMPOUND - Cu + Cu ChEBI - Cu + Cu IUPAC - Kupfer + Kupfer ChEBI - cobre + cobre ChEBI - copper + copper ChEBI - cuivre + cuivre ChEBI - cuprum + cuprum IUPAC @@ -23883,104 +23874,104 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Al - InChI=1S/Al - XAGFODPZIPBFFR-UHFFFAOYSA-N - 26.98154 - 26.98154 - [Al] - CHEBI:22471 - CHEBI:2616 - CAS:7429-90-5 - DrugBank:DB01370 - Gmelin:16248 - KEGG:C06264 - WebElements:Al - aluminium - chebi_ontology - 13Al - Al - Aluminium - aluminio - aluminium - aluminum - CHEBI:28984 + 0 + Al + InChI=1S/Al + XAGFODPZIPBFFR-UHFFFAOYSA-N + 26.98154 + 26.98154 + [Al] + CHEBI:22471 + CHEBI:2616 + CAS:7429-90-5 + DrugBank:DB01370 + Gmelin:16248 + KEGG:C06264 + WebElements:Al + aluminium + chebi_ontology + 13Al + Al + Aluminium + aluminio + aluminium + aluminum + CHEBI:28984 - aluminium atom + aluminium atom - CAS:7429-90-5 + CAS:7429-90-5 ChemIDplus - CAS:7429-90-5 + CAS:7429-90-5 KEGG COMPOUND - Gmelin:16248 + Gmelin:16248 Gmelin - aluminium + aluminium IUPAC - 13Al + 13Al IUPAC - Al + Al IUPAC - Al + Al KEGG_COMPOUND - Aluminium + Aluminium ChEBI - Aluminium + Aluminium KEGG_COMPOUND - aluminio + aluminio ChEBI - aluminium + aluminium ChEBI - aluminum - NIST_Chemistry_WebBook + aluminum + NIST_Chemistry_WebBook @@ -24158,60 +24149,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of hydrogen with relative atomic mass 1.007825 and a natural abundance of 99.9885 atom percent (from Greek pirhoomegatauomicronsigma, first). - 0 - [1H] - InChI=1S/H/i1+0 - YZCKVEUIGOORGS-IGMARMGPSA-N - 1.008 - 1.00783 - [1H] - protium - chebi_ontology - (1)1H - (1)H - hydrogen-1 - protio - protium - CHEBI:29236 + The stable isotope of hydrogen with relative atomic mass 1.007825 and a natural abundance of 99.9885 atom percent (from Greek pirhoomegatauomicronsigma, first). + 0 + [1H] + InChI=1S/H/i1+0 + YZCKVEUIGOORGS-IGMARMGPSA-N + 1.008 + 1.00783 + [1H] + protium + chebi_ontology + (1)1H + (1)H + hydrogen-1 + protio + protium + CHEBI:29236 - protium atom + protium atom - protium + protium IUPAC - (1)1H + (1)1H IUPAC - (1)H + (1)H IUPAC - hydrogen-1 + hydrogen-1 ChEBI - protio + protio ChEBI - protium + protium ChEBI @@ -24221,95 +24212,95 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of hydrogen with relative atomic mass 2.014102 and a natural abundance of 0.0115 atom percent (from Greek deltaepsilonupsilontauepsilonrhoomicronnu, second). - 0 - D - InChI=1S/H2/h1H/i1+1 - UFHFLCQGNIYNRP-OUBTZVSYSA-N - 2.014 - 2.01410 - [2H] - deuterium - chebi_ontology - (2)1H - (2)H - D - Deuterium - deuterio - deuterium - heavy hydrogen - hidrogeno pesado - hydrogen-2 - schwerer Wasserstoff - CHEBI:29237 + The stable isotope of hydrogen with relative atomic mass 2.014102 and a natural abundance of 0.0115 atom percent (from Greek deltaepsilonupsilontauepsilonrhoomicronnu, second). + 0 + D + InChI=1S/H2/h1H/i1+1 + UFHFLCQGNIYNRP-OUBTZVSYSA-N + 2.014 + 2.01410 + [2H] + deuterium + chebi_ontology + (2)1H + (2)H + D + Deuterium + deuterio + deuterium + heavy hydrogen + hidrogeno pesado + hydrogen-2 + schwerer Wasserstoff + CHEBI:29237 - deuterium atom + deuterium atom - deuterium + deuterium IUPAC - (2)1H + (2)1H IUPAC - (2)H + (2)H IUPAC - D + D IUPAC - Deuterium + Deuterium ChEBI - deuterio + deuterio ChEBI - deuterium + deuterium ChEBI - heavy hydrogen + heavy hydrogen ChEBI - hidrogeno pesado + hidrogeno pesado ChEBI - hydrogen-2 + hydrogen-2 ChEBI - schwerer Wasserstoff + schwerer Wasserstoff ChEBI @@ -24319,74 +24310,74 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of hydrogen with relative atomic mass 3.016049 and half-life of 12.33 years (from Greek taurhoiotatauomicronsigma, third). - 0 - T - InChI=1S/H2/h1H/i1+2 - UFHFLCQGNIYNRP-NJFSPNSNSA-N - 3.016 - 3.01605 - [3H] - tritium - chebi_ontology - (3)1H - (3)H - T - hydrogen-3 - tritio - tritium - ueberschwerer Wasserstoff - CHEBI:29238 + The radioactive isotope of hydrogen with relative atomic mass 3.016049 and half-life of 12.33 years (from Greek taurhoiotatauomicronsigma, third). + 0 + T + InChI=1S/H2/h1H/i1+2 + UFHFLCQGNIYNRP-NJFSPNSNSA-N + 3.016 + 3.01605 + [3H] + tritium + chebi_ontology + (3)1H + (3)H + T + hydrogen-3 + tritio + tritium + ueberschwerer Wasserstoff + CHEBI:29238 - tritium atom + tritium atom - tritium + tritium IUPAC - (3)1H + (3)1H IUPAC - (3)H + (3)H IUPAC - T + T IUPAC - hydrogen-3 + hydrogen-3 ChEBI - tritio + tritio ChEBI - tritium + tritium ChEBI - ueberschwerer Wasserstoff + ueberschwerer Wasserstoff ChEBI @@ -24396,81 +24387,81 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Au - InChI=1S/Au - PCHJSUWPFVWCPO-UHFFFAOYSA-N - 196.96655 - 196.96657 - [Au] - CAS:7440-57-5 - WebElements:Au - gold - chebi_ontology - 79Au - Au - Gold - aurum - gold - or - oro - CHEBI:29287 + 0 + Au + InChI=1S/Au + PCHJSUWPFVWCPO-UHFFFAOYSA-N + 196.96655 + 196.96657 + [Au] + CAS:7440-57-5 + WebElements:Au + gold + chebi_ontology + 79Au + Au + Gold + aurum + gold + or + oro + CHEBI:29287 - gold atom + gold atom - CAS:7440-57-5 + CAS:7440-57-5 ChemIDplus - gold + gold IUPAC - 79Au + 79Au IUPAC - Au + Au IUPAC - Gold + Gold ChEBI - aurum + aurum IUPAC - gold + gold ChEBI - or + or ChEBI - oro + oro ChEBI @@ -24840,67 +24831,67 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Li - InChI=1S/Li - WHXSMMKQMYFTQS-UHFFFAOYSA-N - 6.94100 - 7.01600 - [Li] - CAS:7439-93-2 - WebElements:Li - lithium - chebi_ontology - 3Li - Li - Lithium - lithium - litio - CHEBI:30145 + 0 + Li + InChI=1S/Li + WHXSMMKQMYFTQS-UHFFFAOYSA-N + 6.94100 + 7.01600 + [Li] + CAS:7439-93-2 + WebElements:Li + lithium + chebi_ontology + 3Li + Li + Lithium + lithium + litio + CHEBI:30145 - lithium atom + lithium atom - CAS:7439-93-2 + CAS:7439-93-2 NIST Chemistry WebBook - lithium + lithium IUPAC - 3Li + 3Li IUPAC - Li + Li IUPAC - Lithium + Lithium ChEBI - lithium + lithium ChEBI - litio + litio ChEBI @@ -25135,74 +25126,74 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of helium with relative atomic mass 3.016029. The least abundant (0.000137 atom percent) isotope of naturally occurring helium. - 0 - [3He] - InChI=1S/He/i1-1 - SWQJXJOGLNCZEY-BJUDXGSMSA-N - 3.016 - 3.01603 - [3He] - CAS:14762-55-1 - Gmelin:14208 - helium-3 - chebi_ontology - (3)2He - (3)He - (3He)helium - helium, isotope of mass 3 - helium-3 - CHEBI:30218 + The stable isotope of helium with relative atomic mass 3.016029. The least abundant (0.000137 atom percent) isotope of naturally occurring helium. + 0 + [3He] + InChI=1S/He/i1-1 + SWQJXJOGLNCZEY-BJUDXGSMSA-N + 3.016 + 3.01603 + [3He] + CAS:14762-55-1 + Gmelin:14208 + helium-3 + chebi_ontology + (3)2He + (3)He + (3He)helium + helium, isotope of mass 3 + helium-3 + CHEBI:30218 - helium-3 atom + helium-3 atom - CAS:14762-55-1 + CAS:14762-55-1 ChemIDplus - Gmelin:14208 + Gmelin:14208 Gmelin - helium-3 + helium-3 IUPAC - (3)2He + (3)2He IUPAC - (3)He + (3)He IUPAC - (3He)helium + (3He)helium ChemIDplus - helium, isotope of mass 3 + helium, isotope of mass 3 ChemIDplus - helium-3 + helium-3 ChEBI @@ -25212,53 +25203,53 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of helium with relative atomic mass 4.002603. The most abundant (99.99 atom percent) isotope of naturally occurring helium. - 0 - [4He] - InChI=1S/He/i1+0 - SWQJXJOGLNCZEY-IGMARMGPSA-N - 4.003 - 4.00260 - [4He] - Gmelin:14207 - helium-4 - chebi_ontology - (4)2He - (4)He - helium-4 - CHEBI:30219 + The stable isotope of helium with relative atomic mass 4.002603. The most abundant (99.99 atom percent) isotope of naturally occurring helium. + 0 + [4He] + InChI=1S/He/i1+0 + SWQJXJOGLNCZEY-IGMARMGPSA-N + 4.003 + 4.00260 + [4He] + Gmelin:14207 + helium-4 + chebi_ontology + (4)2He + (4)He + helium-4 + CHEBI:30219 - helium-4 atom + helium-4 atom - Gmelin:14207 + Gmelin:14207 Gmelin - helium-4 + helium-4 IUPAC - (4)2He + (4)2He IUPAC - (4)He + (4)He IUPAC - helium-4 + helium-4 ChEBI @@ -25350,87 +25341,87 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - At - InChI=1S/At - RYXHOMYVWAEKHL-UHFFFAOYSA-N - 210.00000 - 210.00000 - [At] - CAS:7440-68-8 - Gmelin:40440 - WebElements:At - astatine - chebi_ontology - 85At - Astat - At - astate - astatine - astato - CHEBI:30415 + 0 + At + InChI=1S/At + RYXHOMYVWAEKHL-UHFFFAOYSA-N + 210.00000 + 210.00000 + [At] + CAS:7440-68-8 + Gmelin:40440 + WebElements:At + astatine + chebi_ontology + 85At + Astat + At + astate + astatine + astato + CHEBI:30415 - astatine atom + astatine atom - CAS:7440-68-8 + CAS:7440-68-8 ChemIDplus - CAS:7440-68-8 + CAS:7440-68-8 NIST Chemistry WebBook - Gmelin:40440 + Gmelin:40440 Gmelin - astatine + astatine IUPAC - 85At + 85At IUPAC - Astat + Astat ChEBI - At + At IUPAC - astate + astate ChEBI - astatine + astatine ChEBI - astato + astato ChEBI @@ -25440,81 +25431,81 @@ For example, A and B may be gene products and binding of B by A positively regul - A metallic element first identified and named from the brilliant indigo (Latin indicum) blue line in its flame spectrum. - 0 - In - InChI=1S/In - APFVFJFRJDLVQX-UHFFFAOYSA-N - 114.81800 - 114.90388 - [In] - CAS:7440-74-6 - Gmelin:16297 - WebElements:In - indium - chebi_ontology - 49In - In - Indium - indio - indium - CHEBI:30430 + A metallic element first identified and named from the brilliant indigo (Latin indicum) blue line in its flame spectrum. + 0 + In + InChI=1S/In + APFVFJFRJDLVQX-UHFFFAOYSA-N + 114.81800 + 114.90388 + [In] + CAS:7440-74-6 + Gmelin:16297 + WebElements:In + indium + chebi_ontology + 49In + In + Indium + indio + indium + CHEBI:30430 - indium atom + indium atom - CAS:7440-74-6 + CAS:7440-74-6 ChemIDplus - CAS:7440-74-6 + CAS:7440-74-6 NIST Chemistry WebBook - Gmelin:16297 + Gmelin:16297 Gmelin - indium + indium IUPAC - 49In + 49In IUPAC - In + In IUPAC - Indium + Indium ChEBI - indio + indio ChEBI - indium + indium ChEBI @@ -25524,67 +25515,67 @@ For example, A and B may be gene products and binding of B by A positively regul - A metallic element first identified and named from the brilliant green line in its flame spectrum (from Greek thetaalphalambdalambdaomicronsigma, a green shoot). - 0 - Tl - InChI=1S/Tl - BKVIYDNLLOSFOA-UHFFFAOYSA-N - 204.38330 - 204.97443 - [Tl] - CAS:7440-28-0 - Gmelin:16308 - WebElements:Tl - thallium - chebi_ontology - 81Tl - Tl - talio - CHEBI:30440 + A metallic element first identified and named from the brilliant green line in its flame spectrum (from Greek thetaalphalambdalambdaomicronsigma, a green shoot). + 0 + Tl + InChI=1S/Tl + BKVIYDNLLOSFOA-UHFFFAOYSA-N + 204.38330 + 204.97443 + [Tl] + CAS:7440-28-0 + Gmelin:16308 + WebElements:Tl + thallium + chebi_ontology + 81Tl + Tl + talio + CHEBI:30440 - thallium + thallium - CAS:7440-28-0 + CAS:7440-28-0 ChemIDplus - CAS:7440-28-0 + CAS:7440-28-0 NIST Chemistry WebBook - Gmelin:16308 + Gmelin:16308 Gmelin - thallium + thallium IUPAC - 81Tl + 81Tl IUPAC - Tl + Tl IUPAC - talio + talio ChEBI @@ -25596,66 +25587,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ge - InChI=1S/Ge - GNPVGFCGXDBREM-UHFFFAOYSA-N - 72.61000 - 73.92118 - [Ge] - CAS:7440-56-4 - WebElements:Ge - germanium - chebi_ontology - 32Ge - Ge - germanio - germanium - CHEBI:30441 + 0 + Ge + InChI=1S/Ge + GNPVGFCGXDBREM-UHFFFAOYSA-N + 72.61000 + 73.92118 + [Ge] + CAS:7440-56-4 + WebElements:Ge + germanium + chebi_ontology + 32Ge + Ge + germanio + germanium + CHEBI:30441 - germanium atom + germanium atom - CAS:7440-56-4 + CAS:7440-56-4 ChemIDplus - CAS:7440-56-4 + CAS:7440-56-4 NIST Chemistry WebBook - germanium + germanium IUPAC - 32Ge + 32Ge IUPAC - Ge + Ge IUPAC - germanio + germanio ChEBI - germanium + germanium ChEBI @@ -25666,87 +25657,87 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Te - InChI=1S/Te - PORWMNRCUJJQNO-UHFFFAOYSA-N - 127.60000 - 129.90622 - [Te] - CAS:13494-80-9 - Gmelin:16309 - WebElements:Te - tellurium - chebi_ontology - 52Te - Te - Tellur - tellure - tellurium - teluro - CHEBI:30452 + 0 + Te + InChI=1S/Te + PORWMNRCUJJQNO-UHFFFAOYSA-N + 127.60000 + 129.90622 + [Te] + CAS:13494-80-9 + Gmelin:16309 + WebElements:Te + tellurium + chebi_ontology + 52Te + Te + Tellur + tellure + tellurium + teluro + CHEBI:30452 - tellurium atom + tellurium atom - CAS:13494-80-9 + CAS:13494-80-9 ChemIDplus - CAS:13494-80-9 + CAS:13494-80-9 NIST Chemistry WebBook - Gmelin:16309 + Gmelin:16309 Gmelin - tellurium + tellurium IUPAC - 52Te + 52Te IUPAC - Te + Te IUPAC - Tellur + Tellur ChEBI - tellure + tellure ChEBI - tellurium + tellurium ChEBI - teluro + teluro ChEBI @@ -25757,137 +25748,137 @@ For example, A and B may be gene products and binding of B by A positively regul - Alkaline earth metal atom with atomic number 4. - 0 - Be - InChI=1S/Be - ATBAMAFKBVZNFJ-UHFFFAOYSA-N - 9.01218 - 9.01218 - [Be] - CAS:7440-41-7 - Gmelin:16265 - PMID:10858219 - PMID:11897645 - PMID:14643414 - PMID:16951350 - PMID:18250483 - PMID:18768897 - PMID:24912188 - Reaxys:14617151 - WebElements:Be - beryllium - chebi_ontology - 4Be - Be - Beryllium - berilio - beryllium - CHEBI:30501 + Alkaline earth metal atom with atomic number 4. + 0 + Be + InChI=1S/Be + ATBAMAFKBVZNFJ-UHFFFAOYSA-N + 9.01218 + 9.01218 + [Be] + CAS:7440-41-7 + Gmelin:16265 + PMID:10858219 + PMID:11897645 + PMID:14643414 + PMID:16951350 + PMID:18250483 + PMID:18768897 + PMID:24912188 + Reaxys:14617151 + WebElements:Be + beryllium + chebi_ontology + 4Be + Be + Beryllium + berilio + beryllium + CHEBI:30501 - beryllium atom + beryllium atom - CAS:7440-41-7 + CAS:7440-41-7 ChemIDplus - CAS:7440-41-7 + CAS:7440-41-7 NIST Chemistry WebBook - Gmelin:16265 + Gmelin:16265 Gmelin - PMID:10858219 + PMID:10858219 Europe PMC - PMID:11897645 + PMID:11897645 Europe PMC - PMID:14643414 + PMID:14643414 Europe PMC - PMID:16951350 + PMID:16951350 Europe PMC - PMID:18250483 + PMID:18250483 Europe PMC - PMID:18768897 + PMID:18768897 Europe PMC - PMID:24912188 + PMID:24912188 Europe PMC - Reaxys:14617151 + Reaxys:14617151 Reaxys - beryllium + beryllium IUPAC - 4Be + 4Be IUPAC - Be + Be IUPAC - Beryllium + Beryllium ChEBI - berilio + berilio ChEBI - beryllium + beryllium ChEBI @@ -25897,81 +25888,81 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ag - InChI=1S/Ag - BQCADISMDOOEFD-UHFFFAOYSA-N - 107.86820 - 106.90509 - [Ag] - CAS:7440-22-4 - WebElements:Ag - silver - chebi_ontology - 47Ag - Ag - Silber - argent - argentum - plata - silver - CHEBI:30512 + 0 + Ag + InChI=1S/Ag + BQCADISMDOOEFD-UHFFFAOYSA-N + 107.86820 + 106.90509 + [Ag] + CAS:7440-22-4 + WebElements:Ag + silver + chebi_ontology + 47Ag + Ag + Silber + argent + argentum + plata + silver + CHEBI:30512 - silver atom + silver atom - CAS:7440-22-4 + CAS:7440-22-4 ChemIDplus - silver + silver IUPAC - 47Ag + 47Ag IUPAC - Ag + Ag IUPAC - Silber + Silber ChemIDplus - argent + argent ChEBI - argentum + argentum IUPAC - plata + plata ChEBI - silver + silver ChEBI @@ -25982,74 +25973,74 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Sb - InChI=1S/Sb - WATWJIUSRGPENY-UHFFFAOYSA-N - 121.76000 - 120.90381 - [Sb] - WebElements:Sb - antimony - chebi_ontology - 51Sb - Antimon - Sb - antimoine - antimonio - antimony - stibium - CHEBI:30513 + 0 + Sb + InChI=1S/Sb + WATWJIUSRGPENY-UHFFFAOYSA-N + 121.76000 + 120.90381 + [Sb] + WebElements:Sb + antimony + chebi_ontology + 51Sb + Antimon + Sb + antimoine + antimonio + antimony + stibium + CHEBI:30513 - antimony atom + antimony atom - antimony + antimony IUPAC - 51Sb + 51Sb IUPAC - Antimon + Antimon ChEBI - Sb + Sb IUPAC - antimoine + antimoine ChEBI - antimonio + antimonio ChEBI - antimony + antimony ChEBI - stibium + stibium IUPAC @@ -26059,80 +26050,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Cs - InChI=1S/Cs - TVFDJXOCXUVLDH-UHFFFAOYSA-N - 132.90545 - 132.90545 - [Cs] - WebElements:Cs - caesium - chebi_ontology - 55Cs - Caesium - Cs - Zaesium - caesium - cesio - cesium - CHEBI:30514 + 0 + Cs + InChI=1S/Cs + TVFDJXOCXUVLDH-UHFFFAOYSA-N + 132.90545 + 132.90545 + [Cs] + WebElements:Cs + caesium + chebi_ontology + 55Cs + Caesium + Cs + Zaesium + caesium + cesio + cesium + CHEBI:30514 - caesium atom + caesium atom - caesium + caesium IUPAC - 55Cs + 55Cs IUPAC - Caesium + Caesium ChEBI - Cs + Cs IUPAC - Zaesium + Zaesium ChEBI - caesium + caesium ChEBI - cesio + cesio ChEBI - cesium + cesium ChEBI - cesium + cesium IUPAC @@ -26143,73 +26134,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ru - InChI=1S/Ru - KJTLSVCANCCWHF-UHFFFAOYSA-N - 101.07000 - 101.90434 - [Ru] - CAS:7440-18-8 - WebElements:Ru - ruthenium - chebi_ontology - 44Ru - Ru - Ruthenium - rutenio - ruthenium - CHEBI:30682 + 0 + Ru + InChI=1S/Ru + KJTLSVCANCCWHF-UHFFFAOYSA-N + 101.07000 + 101.90434 + [Ru] + CAS:7440-18-8 + WebElements:Ru + ruthenium + chebi_ontology + 44Ru + Ru + Ruthenium + rutenio + ruthenium + CHEBI:30682 - ruthenium atom + ruthenium atom - CAS:7440-18-8 + CAS:7440-18-8 ChemIDplus - CAS:7440-18-8 + CAS:7440-18-8 NIST Chemistry WebBook - ruthenium + ruthenium IUPAC - 44Ru + 44Ru IUPAC - Ru + Ru IUPAC - Ruthenium + Ruthenium ChEBI - rutenio + rutenio ChEBI - ruthenium + ruthenium ChEBI @@ -26220,73 +26211,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Os - InChI=1S/Os - SYQBFIAQOQZEGI-UHFFFAOYSA-N - 190.23000 - 191.96148 - [Os] - CAS:7440-04-2 - Gmelin:16234 - WebElements:Os - osmium - chebi_ontology - 76Os - Os - osmio - osmium - CHEBI:30687 + 0 + Os + InChI=1S/Os + SYQBFIAQOQZEGI-UHFFFAOYSA-N + 190.23000 + 191.96148 + [Os] + CAS:7440-04-2 + Gmelin:16234 + WebElements:Os + osmium + chebi_ontology + 76Os + Os + osmio + osmium + CHEBI:30687 - osmium atom + osmium atom - CAS:7440-04-2 + CAS:7440-04-2 ChemIDplus - CAS:7440-04-2 + CAS:7440-04-2 NIST Chemistry WebBook - Gmelin:16234 + Gmelin:16234 Gmelin - osmium + osmium IUPAC - 76Os + 76Os IUPAC - Os + Os IUPAC - osmio + osmio ChEBI - osmium + osmium ChEBI @@ -26360,67 +26351,67 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ba - InChI=1S/Ba - DSAJWYNOEDNPEQ-UHFFFAOYSA-N - 137.32700 - 137.90525 - [Ba] - WebElements:Ba - barium - chebi_ontology - 56Ba - Ba - Barium - bario - barium - baryum - CHEBI:32594 + 0 + Ba + InChI=1S/Ba + DSAJWYNOEDNPEQ-UHFFFAOYSA-N + 137.32700 + 137.90525 + [Ba] + WebElements:Ba + barium + chebi_ontology + 56Ba + Ba + Barium + bario + barium + baryum + CHEBI:32594 - barium atom + barium atom - barium + barium IUPAC - 56Ba + 56Ba IUPAC - Ba + Ba IUPAC - Barium + Barium ChEBI - bario + bario ChEBI - barium + barium ChEBI - baryum + baryum ChEBI @@ -26508,67 +26499,67 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Eu - InChI=1S/Eu - OGPBJKLSAFTDLK-UHFFFAOYSA-N - 151.96400 - 152.92124 - [Eu] - CAS:7440-53-1 - Gmelin:16279 - WebElements:Eu - europium - chebi_ontology - 63Eu - Eu - europio - europium - CHEBI:32999 + 0 + Eu + InChI=1S/Eu + OGPBJKLSAFTDLK-UHFFFAOYSA-N + 151.96400 + 152.92124 + [Eu] + CAS:7440-53-1 + Gmelin:16279 + WebElements:Eu + europium + chebi_ontology + 63Eu + Eu + europio + europium + CHEBI:32999 - europium atom + europium atom - CAS:7440-53-1 + CAS:7440-53-1 ChemIDplus - Gmelin:16279 + Gmelin:16279 Gmelin - europium + europium IUPAC - 63Eu + 63Eu IUPAC - Eu + Eu IUPAC - europio + europio ChEBI - europium + europium ChEBI @@ -27569,74 +27560,74 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Bi - InChI=1S/Bi - JCXGWMGPZLAOME-UHFFFAOYSA-N - 208.98038 - 208.98040 - [Bi] - CAS:7440-69-9 - WebElements:Bi - bismuth - chebi_ontology - 83Bi - Bi - Bismut - Wismut - bismuth - bismuto - CHEBI:33301 + 0 + Bi + InChI=1S/Bi + JCXGWMGPZLAOME-UHFFFAOYSA-N + 208.98038 + 208.98040 + [Bi] + CAS:7440-69-9 + WebElements:Bi + bismuth + chebi_ontology + 83Bi + Bi + Bismut + Wismut + bismuth + bismuto + CHEBI:33301 - bismuth atom + bismuth atom - CAS:7440-69-9 + CAS:7440-69-9 ChemIDplus - bismuth + bismuth IUPAC - 83Bi + 83Bi IUPAC - Bi + Bi IUPAC - Bismut + Bismut ChEBI - Wismut + Wismut ChEBI - bismuth + bismuth ChEBI - bismuto + bismuto ChEBI @@ -28048,60 +28039,60 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ne - InChI=1S/Ne - GKAOGPIIYCISHV-UHFFFAOYSA-N - 20.17970 - 19.99244 - [Ne] - CAS:7440-01-9 - WebElements:Ne - neon - chebi_ontology - 10Ne - Ne - Neon - neon - CHEBI:33310 + 0 + Ne + InChI=1S/Ne + GKAOGPIIYCISHV-UHFFFAOYSA-N + 20.17970 + 19.99244 + [Ne] + CAS:7440-01-9 + WebElements:Ne + neon + chebi_ontology + 10Ne + Ne + Neon + neon + CHEBI:33310 - neon atom + neon atom - CAS:7440-01-9 + CAS:7440-01-9 ChemIDplus - neon + neon IUPAC - 10Ne + 10Ne IUPAC - Ne + Ne ChEBI - Neon + Neon ChEBI - neon + neon ChEBI @@ -28112,74 +28103,74 @@ For example, A and B may be gene products and binding of B by A positively regul - A radioactive metallic element discovered in 1898 by Marie Sklodowska Curie and named after her home country, Poland (Latin Polonia). - 0 - Po - InChI=1S/Po - HZEBHPIOVYHPMT-UHFFFAOYSA-N - 209.00000 - 209.00000 - [Po] - CAS:7440-08-6 - Gmelin:40435 - WebElements:Po - polonium - chebi_ontology - 84Po - Po - polonio - polonium - CHEBI:33313 + A radioactive metallic element discovered in 1898 by Marie Sklodowska Curie and named after her home country, Poland (Latin Polonia). + 0 + Po + InChI=1S/Po + HZEBHPIOVYHPMT-UHFFFAOYSA-N + 209.00000 + 209.00000 + [Po] + CAS:7440-08-6 + Gmelin:40435 + WebElements:Po + polonium + chebi_ontology + 84Po + Po + polonio + polonium + CHEBI:33313 - polonium atom + polonium atom - CAS:7440-08-6 + CAS:7440-08-6 ChemIDplus - CAS:7440-08-6 + CAS:7440-08-6 NIST Chemistry WebBook - Gmelin:40435 + Gmelin:40435 Gmelin - polonium + polonium IUPAC - 84Po + 84Po IUPAC - Po + Po IUPAC - polonio + polonio ChEBI - polonium + polonium ChEBI @@ -28332,45 +28323,45 @@ For example, A and B may be gene products and binding of B by A positively regul - group 13 elements - chebi_ontology - Element der Borgruppe - boron group element - boron group elements - group III elements - CHEBI:33317 + group 13 elements + chebi_ontology + Element der Borgruppe + boron group element + boron group elements + group III elements + CHEBI:33317 - boron group element atom + boron group element atom - group 13 elements + group 13 elements IUPAC - Element der Borgruppe + Element der Borgruppe ChEBI - boron group element + boron group element ChEBI - boron group elements + boron group elements ChEBI - group III elements + group III elements ChEBI @@ -28422,73 +28413,73 @@ For example, A and B may be gene products and binding of B by A positively regul - lanthanoids - chebi_ontology - Lanthanoid - Lanthanoide - Lanthanoidengruppe - Lanthanoidenreiche - Ln - lanthanide - lanthanides - lanthanoid - CHEBI:33319 + lanthanoids + chebi_ontology + Lanthanoid + Lanthanoide + Lanthanoidengruppe + Lanthanoidenreiche + Ln + lanthanide + lanthanides + lanthanoid + CHEBI:33319 - lanthanoid atom + lanthanoid atom - lanthanoids + lanthanoids IUPAC - Lanthanoid + Lanthanoid ChEBI - Lanthanoide + Lanthanoide ChEBI - Lanthanoidengruppe + Lanthanoidengruppe ChEBI - Lanthanoidenreiche + Lanthanoidenreiche ChEBI - Ln + Ln ChEBI - lanthanide + lanthanide ChEBI - lanthanides + lanthanides ChEBI - lanthanoid + lanthanoid ChEBI @@ -28498,87 +28489,87 @@ For example, A and B may be gene products and binding of B by A positively regul - actinoids - chebi_ontology - Actinoid - Actinoide - Actinoidenelemente - Actinoidengruppe - Aktinoide - Aktinoidenelemente - An - actinide - actinides - actinoid - CHEBI:33320 + actinoids + chebi_ontology + Actinoid + Actinoide + Actinoidenelemente + Actinoidengruppe + Aktinoide + Aktinoidenelemente + An + actinide + actinides + actinoid + CHEBI:33320 - actinoid atom + actinoid atom - actinoids + actinoids IUPAC - Actinoid + Actinoid ChEBI - Actinoide + Actinoide ChEBI - Actinoidenelemente + Actinoidenelemente ChEBI - Actinoidengruppe + Actinoidengruppe ChEBI - Aktinoide + Aktinoide ChEBI - Aktinoidenelemente + Aktinoidenelemente ChEBI - An + An ChEBI - actinide + actinide ChEBI - actinides + actinides ChEBI - actinoid + actinoid ChEBI @@ -28588,24 +28579,24 @@ For example, A and B may be gene products and binding of B by A positively regul - rare earth metals - chebi_ontology - rare earth metal - CHEBI:33321 + rare earth metals + chebi_ontology + rare earth metal + CHEBI:33321 - rare earth metal atom + rare earth metal atom - rare earth metals + rare earth metals IUPAC - rare earth metal + rare earth metal ChEBI @@ -28615,74 +28606,74 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Rb - InChI=1S/Rb - IGLNJRXAVVLDKE-UHFFFAOYSA-N - 85.46780 - 84.91179 - [Rb] - CAS:7440-17-7 - DrugBank:DB06749 - Gmelin:16244 - WebElements:Rb - rubidium - chebi_ontology - 37Rb - Rb - rubidio - rubidium - CHEBI:33322 + 0 + Rb + InChI=1S/Rb + IGLNJRXAVVLDKE-UHFFFAOYSA-N + 85.46780 + 84.91179 + [Rb] + CAS:7440-17-7 + DrugBank:DB06749 + Gmelin:16244 + WebElements:Rb + rubidium + chebi_ontology + 37Rb + Rb + rubidio + rubidium + CHEBI:33322 - rubidium atom + rubidium atom - CAS:7440-17-7 + CAS:7440-17-7 ChemIDplus - CAS:7440-17-7 + CAS:7440-17-7 NIST Chemistry WebBook - Gmelin:16244 + Gmelin:16244 Gmelin - rubidium + rubidium IUPAC - 37Rb + 37Rb IUPAC - Rb + Rb IUPAC - rubidio + rubidio ChEBI - rubidium + rubidium ChEBI @@ -28692,80 +28683,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Fr - InChI=1S/Fr - KLMCZVJOEAUDNE-UHFFFAOYSA-N - 223.00000 - 223.00000 - [Fr] - CAS:7440-73-5 - Gmelin:40458 - WebElements:Fr - francium - chebi_ontology - 87Fr - Fr - Franzium - francio - francium - CHEBI:33323 + 0 + Fr + InChI=1S/Fr + KLMCZVJOEAUDNE-UHFFFAOYSA-N + 223.00000 + 223.00000 + [Fr] + CAS:7440-73-5 + Gmelin:40458 + WebElements:Fr + francium + chebi_ontology + 87Fr + Fr + Franzium + francio + francium + CHEBI:33323 - francium atom + francium atom - CAS:7440-73-5 + CAS:7440-73-5 ChemIDplus - CAS:7440-73-5 + CAS:7440-73-5 NIST Chemistry WebBook - Gmelin:40458 + Gmelin:40458 Gmelin - francium + francium IUPAC - 87Fr + 87Fr IUPAC - Fr + Fr IUPAC - Franzium + Franzium ChEBI - francio + francio ChEBI - francium + francium ChEBI @@ -28775,66 +28766,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Sr - InChI=1S/Sr - CIOAGBVUUVVLOB-UHFFFAOYSA-N - 87.62000 - 87.90561 - [Sr] - CAS:7440-24-6 - WebElements:Sr - strontium - chebi_ontology - 38Sr - Sr - estroncio - strontium - CHEBI:33324 + 0 + Sr + InChI=1S/Sr + CIOAGBVUUVVLOB-UHFFFAOYSA-N + 87.62000 + 87.90561 + [Sr] + CAS:7440-24-6 + WebElements:Sr + strontium + chebi_ontology + 38Sr + Sr + estroncio + strontium + CHEBI:33324 - strontium atom + strontium atom - CAS:7440-24-6 + CAS:7440-24-6 ChemIDplus - CAS:7440-24-6 + CAS:7440-24-6 NIST Chemistry WebBook - strontium + strontium IUPAC - 38Sr + 38Sr IUPAC - Sr + Sr IUPAC - estroncio + estroncio ChEBI - strontium + strontium ChEBI @@ -28844,66 +28835,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ra - InChI=1S/Ra - HCWPIIXVSYCSAN-UHFFFAOYSA-N - 226.00000 - 226.00000 - [Ra] - CAS:7440-14-4 - WebElements:Ra - radium - chebi_ontology - 88Ra - Ra - radio - radium - CHEBI:33325 + 0 + Ra + InChI=1S/Ra + HCWPIIXVSYCSAN-UHFFFAOYSA-N + 226.00000 + 226.00000 + [Ra] + CAS:7440-14-4 + WebElements:Ra + radium + chebi_ontology + 88Ra + Ra + radio + radium + CHEBI:33325 - radium atom + radium atom - CAS:7440-14-4 + CAS:7440-14-4 ChemIDplus - CAS:7440-14-4 + CAS:7440-14-4 NIST Chemistry WebBook - radium + radium IUPAC - 88Ra + 88Ra IUPAC - Ra + Ra IUPAC - radio + radio ChEBI - radium + radium ChEBI @@ -28915,73 +28906,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Sc - InChI=1S/Sc - SIXSYDAISGFNSX-UHFFFAOYSA-N - 44.95591 - 44.95591 - [Sc] - CAS:7440-20-2 - WebElements:Sc - scandium - chebi_ontology - 21Sc - Sc - Skandium - escandio - scandium - CHEBI:33330 + 0 + Sc + InChI=1S/Sc + SIXSYDAISGFNSX-UHFFFAOYSA-N + 44.95591 + 44.95591 + [Sc] + CAS:7440-20-2 + WebElements:Sc + scandium + chebi_ontology + 21Sc + Sc + Skandium + escandio + scandium + CHEBI:33330 - scandium atom + scandium atom - CAS:7440-20-2 + CAS:7440-20-2 ChemIDplus - CAS:7440-20-2 + CAS:7440-20-2 NIST Chemistry WebBook - scandium + scandium IUPAC - 21Sc + 21Sc IUPAC - Sc + Sc IUPAC - Skandium + Skandium ChEBI - escandio + escandio ChEBI - scandium + scandium ChEBI @@ -28993,73 +28984,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Y - InChI=1S/Y - VWQVUPCCIRVNHF-UHFFFAOYSA-N - 88.90585 - 88.90584 - [Y] - CAS:7440-65-5 - Gmelin:16319 - WebElements:Y - yttrium - chebi_ontology - 39Y - Y - ytrio - yttrium - CHEBI:33331 + 0 + Y + InChI=1S/Y + VWQVUPCCIRVNHF-UHFFFAOYSA-N + 88.90585 + 88.90584 + [Y] + CAS:7440-65-5 + Gmelin:16319 + WebElements:Y + yttrium + chebi_ontology + 39Y + Y + ytrio + yttrium + CHEBI:33331 - yttrium atom + yttrium atom - CAS:7440-65-5 + CAS:7440-65-5 ChemIDplus - CAS:7440-65-5 + CAS:7440-65-5 NIST Chemistry WebBook - Gmelin:16319 + Gmelin:16319 Gmelin - yttrium + yttrium IUPAC - 39Y + 39Y IUPAC - Y + Y ChEBI - ytrio + ytrio ChEBI - yttrium + yttrium ChEBI @@ -29069,31 +29060,31 @@ For example, A and B may be gene products and binding of B by A positively regul - group 3 elements - chebi_ontology - scandium group element - scandium group elements - CHEBI:33335 + group 3 elements + chebi_ontology + scandium group element + scandium group elements + CHEBI:33335 - scandium group element atom + scandium group element atom - group 3 elements + group 3 elements IUPAC - scandium group element + scandium group element ChEBI - scandium group elements + scandium group elements ChEBI @@ -29105,87 +29096,87 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - La - InChI=1S/La - FZLIPJUXYLNCLC-UHFFFAOYSA-N - 138.90550 - 138.90636 - [La] - CAS:7439-91-0 - Gmelin:16203 - WebElements:La - lanthanum - chebi_ontology - 57La - La - Lanthan - lantano - lanthane - lanthanum - CHEBI:33336 + 0 + La + InChI=1S/La + FZLIPJUXYLNCLC-UHFFFAOYSA-N + 138.90550 + 138.90636 + [La] + CAS:7439-91-0 + Gmelin:16203 + WebElements:La + lanthanum + chebi_ontology + 57La + La + Lanthan + lantano + lanthane + lanthanum + CHEBI:33336 - lanthanum atom + lanthanum atom - CAS:7439-91-0 + CAS:7439-91-0 ChemIDplus - CAS:7439-91-0 + CAS:7439-91-0 NIST Chemistry WebBook - Gmelin:16203 + Gmelin:16203 Gmelin - lanthanum + lanthanum IUPAC - 57La + 57La IUPAC - La + La ChEBI - Lanthan + Lanthan ChEBI - lantano + lantano ChEBI - lanthane + lanthane ChEBI - lanthanum + lanthanum ChEBI @@ -29196,73 +29187,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ac - InChI=1S/Ac - QQINRWTZWGJFDB-UHFFFAOYSA-N - 227.00000 - 227.00000 - [Ac] - CAS:7440-34-8 - WebElements:Ac - actinium - chebi_ontology - 89Ac - Ac - Aktinium - actinio - actinium - CHEBI:33337 + 0 + Ac + InChI=1S/Ac + QQINRWTZWGJFDB-UHFFFAOYSA-N + 227.00000 + 227.00000 + [Ac] + CAS:7440-34-8 + WebElements:Ac + actinium + chebi_ontology + 89Ac + Ac + Aktinium + actinio + actinium + CHEBI:33337 - actinium atom + actinium atom - CAS:7440-34-8 + CAS:7440-34-8 ChemIDplus - CAS:7440-34-8 + CAS:7440-34-8 NIST Chemistry WebBook - actinium + actinium IUPAC - 89Ac + 89Ac IUPAC - Ac + Ac IUPAC - Aktinium + Aktinium ChEBI - actinio + actinio ChEBI - actinium + actinium ChEBI @@ -29272,31 +29263,31 @@ For example, A and B may be gene products and binding of B by A positively regul - group 12 elements - chebi_ontology - zinc group element - zinc group elements - CHEBI:33340 + group 12 elements + chebi_ontology + zinc group element + zinc group elements + CHEBI:33340 - zinc group element atom + zinc group element atom - group 12 elements + group 12 elements IUPAC - zinc group element + zinc group element ChEBI - zinc group elements + zinc group elements ChEBI @@ -29306,80 +29297,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ti - InChI=1S/Ti - RTAQQCXQSZGOHL-UHFFFAOYSA-N - 47.86700 - 47.94794 - [Ti] - CAS:7440-32-6 - WebElements:Ti - titanium - chebi_ontology - 22Ti - Ti - Titan - titane - titanio - titanium - CHEBI:33341 + 0 + Ti + InChI=1S/Ti + RTAQQCXQSZGOHL-UHFFFAOYSA-N + 47.86700 + 47.94794 + [Ti] + CAS:7440-32-6 + WebElements:Ti + titanium + chebi_ontology + 22Ti + Ti + Titan + titane + titanio + titanium + CHEBI:33341 - titanium atom + titanium atom - CAS:7440-32-6 + CAS:7440-32-6 ChemIDplus - CAS:7440-32-6 + CAS:7440-32-6 NIST Chemistry WebBook - titanium + titanium IUPAC - 22Ti + 22Ti IUPAC - Ti + Ti IUPAC - Titan + Titan ChEBI - titane + titane ChEBI - titanio + titanio ChEBI - titanium + titanium ChEBI @@ -29389,80 +29380,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Zr - InChI=1S/Zr - QCWXUUIWCKQGHC-UHFFFAOYSA-N - 91.22400 - 89.90470 - [Zr] - CAS:7440-67-7 - WebElements:Zr - zirconium - chebi_ontology - 40Zr - Zirkonium - Zr - circonio - zirconio - zirconium - CHEBI:33342 + 0 + Zr + InChI=1S/Zr + QCWXUUIWCKQGHC-UHFFFAOYSA-N + 91.22400 + 89.90470 + [Zr] + CAS:7440-67-7 + WebElements:Zr + zirconium + chebi_ontology + 40Zr + Zirkonium + Zr + circonio + zirconio + zirconium + CHEBI:33342 - zirconium atom + zirconium atom - CAS:7440-67-7 + CAS:7440-67-7 ChemIDplus - CAS:7440-67-7 + CAS:7440-67-7 NIST Chemistry WebBook - zirconium + zirconium IUPAC - 40Zr + 40Zr IUPAC - Zirkonium + Zirkonium ChEBI - Zr + Zr IUPAC - circonio + circonio ChEBI - zirconio + zirconio ChEBI - zirconium + zirconium ChEBI @@ -29472,66 +29463,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Hf - InChI=1S/Hf - VBJZVLUMGGDVMO-UHFFFAOYSA-N - 178.49000 - 179.94656 - [Hf] - CAS:7440-58-6 - WebElements:Hf - hafnium - chebi_ontology - 72Hf - Hf - hafnio - hafnium - CHEBI:33343 + 0 + Hf + InChI=1S/Hf + VBJZVLUMGGDVMO-UHFFFAOYSA-N + 178.49000 + 179.94656 + [Hf] + CAS:7440-58-6 + WebElements:Hf + hafnium + chebi_ontology + 72Hf + Hf + hafnio + hafnium + CHEBI:33343 - hafnium atom + hafnium atom - CAS:7440-58-6 + CAS:7440-58-6 ChemIDplus - CAS:7440-58-6 + CAS:7440-58-6 NIST Chemistry WebBook - hafnium + hafnium IUPAC - 72Hf + 72Hf IUPAC - Hf + Hf IUPAC - hafnio + hafnio ChEBI - hafnium + hafnium ChEBI @@ -29541,87 +29532,87 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Nb - InChI=1S/Nb - GUCVJGMIXFAOAE-UHFFFAOYSA-N - 92.90638 - 92.90637 - [Nb] - CAS:7440-03-1 - WebElements:Nb - niobium - chebi_ontology - 41Nb - Nb - Niob - columbio - columbium - niobio - niobium - CHEBI:33344 + 0 + Nb + InChI=1S/Nb + GUCVJGMIXFAOAE-UHFFFAOYSA-N + 92.90638 + 92.90637 + [Nb] + CAS:7440-03-1 + WebElements:Nb + niobium + chebi_ontology + 41Nb + Nb + Niob + columbio + columbium + niobio + niobium + CHEBI:33344 - niobium atom + niobium atom - CAS:7440-03-1 + CAS:7440-03-1 ChemIDplus - CAS:7440-03-1 + CAS:7440-03-1 NIST Chemistry WebBook - niobium + niobium IUPAC - 41Nb + 41Nb IUPAC - Nb + Nb IUPAC - Niob + Niob ChEBI - columbio + columbio ChEBI - columbium - NIST_Chemistry_WebBook + columbium + NIST_Chemistry_WebBook - niobio + niobio ChEBI - niobium + niobium ChEBI @@ -29631,31 +29622,31 @@ For example, A and B may be gene products and binding of B by A positively regul - group 4 elements - chebi_ontology - titanium group element - titanium group elements - CHEBI:33345 + group 4 elements + chebi_ontology + titanium group element + titanium group elements + CHEBI:33345 - titanium group element atom + titanium group element atom - group 4 elements + group 4 elements IUPAC - titanium group element + titanium group element ChEBI - titanium group elements + titanium group elements ChEBI @@ -29665,81 +29656,81 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Rf - InChI=1S/Rf - YGPLJIIQQIDVFJ-UHFFFAOYSA-N - 261.00000 - 267.00000 - [Rf] - WebElements:Rf - rutherfordium - chebi_ontology - 104Rf - Ku - Rf - Unq - kurchatovium - rutherfordio - rutherfordium - unnilquadium - CHEBI:33346 + 0 + Rf + InChI=1S/Rf + YGPLJIIQQIDVFJ-UHFFFAOYSA-N + 261.00000 + 267.00000 + [Rf] + WebElements:Rf + rutherfordium + chebi_ontology + 104Rf + Ku + Rf + Unq + kurchatovium + rutherfordio + rutherfordium + unnilquadium + CHEBI:33346 - rutherfordium atom + rutherfordium atom - rutherfordium + rutherfordium IUPAC - 104Rf + 104Rf IUPAC - Ku + Ku ChEBI - Rf + Rf IUPAC - Unq + Unq IUPAC - kurchatovium + kurchatovium ChEBI - rutherfordio + rutherfordio ChEBI - rutherfordium + rutherfordium ChEBI - unnilquadium + unnilquadium IUPAC @@ -29749,31 +29740,31 @@ For example, A and B may be gene products and binding of B by A positively regul - group 5 elements - chebi_ontology - vanadium group element - vanadium group elements - CHEBI:33347 + group 5 elements + chebi_ontology + vanadium group element + vanadium group elements + CHEBI:33347 - vanadium group element atom + vanadium group element atom - group 5 elements + group 5 elements IUPAC - vanadium group element + vanadium group element ChEBI - vanadium group elements + vanadium group elements ChEBI @@ -29783,80 +29774,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ta - InChI=1S/Ta - GUVRBAGPIYLISA-UHFFFAOYSA-N - 180.94790 - 180.94800 - [Ta] - CAS:7440-25-7 - WebElements:Ta - tantalum - chebi_ontology - 73Ta - Ta - Tantal - tantale - tantalo - tantalum - CHEBI:33348 + 0 + Ta + InChI=1S/Ta + GUVRBAGPIYLISA-UHFFFAOYSA-N + 180.94790 + 180.94800 + [Ta] + CAS:7440-25-7 + WebElements:Ta + tantalum + chebi_ontology + 73Ta + Ta + Tantal + tantale + tantalo + tantalum + CHEBI:33348 - tantalum atom + tantalum atom - CAS:7440-25-7 + CAS:7440-25-7 ChemIDplus - CAS:7440-25-7 + CAS:7440-25-7 NIST Chemistry WebBook - tantalum + tantalum IUPAC - 73Ta + 73Ta IUPAC - Ta + Ta IUPAC - Tantal + Tantal ChEBI - tantale + tantale ChEBI - tantalo + tantalo ChEBI - tantalum + tantalum ChEBI @@ -29866,93 +29857,93 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Db - 262.00000 - 270.00000 - [Db] - WebElements:Db - dubnium - chebi_ontology - 105Db - Db - Ha - Ns - Unp - dubnio - dubnium - hahnium - nielsbohrium - unnilpentium - CHEBI:33349 + 0 + Db + 262.00000 + 270.00000 + [Db] + WebElements:Db + dubnium + chebi_ontology + 105Db + Db + Ha + Ns + Unp + dubnio + dubnium + hahnium + nielsbohrium + unnilpentium + CHEBI:33349 - dubnium atom + dubnium atom - dubnium + dubnium IUPAC - 105Db + 105Db IUPAC - Db + Db IUPAC - Ha + Ha ChEBI - Ns + Ns ChEBI - Unp + Unp IUPAC - dubnio + dubnio ChEBI - dubnium + dubnium ChEBI - hahnium + hahnium ChEBI - nielsbohrium + nielsbohrium ChEBI - unnilpentium + unnilpentium IUPAC @@ -29962,31 +29953,31 @@ For example, A and B may be gene products and binding of B by A positively regul - group 6 elements - chebi_ontology - chromium group element - chromium group elements - CHEBI:33350 + group 6 elements + chebi_ontology + chromium group element + chromium group elements + CHEBI:33350 - chromium group element atom + chromium group element atom - group 6 elements + group 6 elements IUPAC - chromium group element + chromium group element ChEBI - chromium group elements + chromium group elements ChEBI @@ -29996,65 +29987,65 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Sg - 263.00000 - 271.00000 - [Sg] - WebElements:Sg - seaborgium - chebi_ontology - 106Sg - Sg - Unh - seaborgio - seaborgium - unnilhexium - CHEBI:33351 + 0 + Sg + 263.00000 + 271.00000 + [Sg] + WebElements:Sg + seaborgium + chebi_ontology + 106Sg + Sg + Unh + seaborgio + seaborgium + unnilhexium + CHEBI:33351 - seaborgium atom + seaborgium atom - seaborgium + seaborgium IUPAC - 106Sg + 106Sg IUPAC - Sg + Sg IUPAC - Unh + Unh ChEBI - seaborgio + seaborgio ChEBI - seaborgium + seaborgium ChEBI - unnilhexium + unnilhexium IUPAC @@ -30064,31 +30055,31 @@ For example, A and B may be gene products and binding of B by A positively regul - group 7 elements - chebi_ontology - manganese group element - manganese group elements - CHEBI:33352 + group 7 elements + chebi_ontology + manganese group element + manganese group elements + CHEBI:33352 - manganese group element atom + manganese group element atom - group 7 elements + group 7 elements IUPAC - manganese group element + manganese group element ChEBI - manganese group elements + manganese group elements ChEBI @@ -30098,80 +30089,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Tc - InChI=1S/Tc - GKLVYJBZJHMRIY-UHFFFAOYSA-N - 98.00000 - 97.00000 - [Tc] - CAS:7440-26-8 - Gmelin:16310 - WebElements:Tc - technetium - chebi_ontology - 43Tc - Tc - Technetium - technetium - tecnecio - CHEBI:33353 + 0 + Tc + InChI=1S/Tc + GKLVYJBZJHMRIY-UHFFFAOYSA-N + 98.00000 + 97.00000 + [Tc] + CAS:7440-26-8 + Gmelin:16310 + WebElements:Tc + technetium + chebi_ontology + 43Tc + Tc + Technetium + technetium + tecnecio + CHEBI:33353 - technetium atom + technetium atom - CAS:7440-26-8 + CAS:7440-26-8 ChemIDplus - CAS:7440-26-8 + CAS:7440-26-8 NIST Chemistry WebBook - Gmelin:16310 + Gmelin:16310 Gmelin - technetium + technetium IUPAC - 43Tc + 43Tc IUPAC - Tc + Tc IUPAC - Technetium + Technetium ChEBI - technetium + technetium ChEBI - tecnecio + tecnecio ChEBI @@ -30181,79 +30172,79 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Bh - 264.00000 - 270.00000 - [Bh] - WebElements:Bh - bohrium - chebi_ontology - 107Bh - Bh - Ns - Uns - bohrio - bohrium - nielsbohrium - unnilseptium - CHEBI:33355 + 0 + Bh + 264.00000 + 270.00000 + [Bh] + WebElements:Bh + bohrium + chebi_ontology + 107Bh + Bh + Ns + Uns + bohrio + bohrium + nielsbohrium + unnilseptium + CHEBI:33355 - bohrium atom + bohrium atom - bohrium + bohrium IUPAC - 107Bh + 107Bh IUPAC - Bh + Bh IUPAC - Ns + Ns ChEBI - Uns + Uns IUPAC - bohrio + bohrio ChEBI - bohrium + bohrium ChEBI - nielsbohrium + nielsbohrium ChEBI - unnilseptium + unnilseptium IUPAC @@ -30264,12 +30255,12 @@ For example, A and B may be gene products and binding of B by A positively regul group 8 elements - chebi_ontology + chebi_ontology iron group element iron group elements - CHEBI:33356 + CHEBI:33356 - iron group element atom + iron group element atom @@ -30297,79 +30288,79 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Hs - 265.00000 - 277.00000 - [Hs] - WebElements:Hs - hassium - chebi_ontology - 108Hs - Ha - Hs - Uno - hahnium - hassio - hassium - unniloctium - CHEBI:33357 + 0 + Hs + 265.00000 + 277.00000 + [Hs] + WebElements:Hs + hassium + chebi_ontology + 108Hs + Ha + Hs + Uno + hahnium + hassio + hassium + unniloctium + CHEBI:33357 - hassium atom + hassium atom - hassium + hassium IUPAC - 108Hs + 108Hs IUPAC - Ha + Ha ChEBI - Hs + Hs IUPAC - Uno + Uno IUPAC - hahnium + hahnium ChEBI - hassio + hassio ChEBI - hassium + hassium ChEBI - unniloctium + unniloctium IUPAC @@ -30379,31 +30370,31 @@ For example, A and B may be gene products and binding of B by A positively regul - group 9 elements - chebi_ontology - cobalt group element - cobalt group elements - CHEBI:33358 + group 9 elements + chebi_ontology + cobalt group element + cobalt group elements + CHEBI:33358 - cobalt group element atom + cobalt group element atom - group 9 elements + group 9 elements IUPAC - cobalt group element + cobalt group element ChEBI - cobalt group elements + cobalt group elements ChEBI @@ -30413,75 +30404,75 @@ For example, A and B may be gene products and binding of B by A positively regul - A cobalt group element atom of atomic number 45. - 0 - Rh - InChI=1S/Rh - MHOVAHRLVXNVSD-UHFFFAOYSA-N - 102.90550 - 102.90550 - [Rh] - CAS:7440-16-6 - PMID:2936374 - WebElements:Rh - Wikipedia:Rhodium - rhodium - chebi_ontology - 45Rh - Rh - rhodium - rodio - CHEBI:33359 + A cobalt group element atom of atomic number 45. + 0 + Rh + InChI=1S/Rh + MHOVAHRLVXNVSD-UHFFFAOYSA-N + 102.90550 + 102.90550 + [Rh] + CAS:7440-16-6 + PMID:2936374 + WebElements:Rh + Wikipedia:Rhodium + rhodium + chebi_ontology + 45Rh + Rh + rhodium + rodio + CHEBI:33359 - rhodium atom + rhodium atom - CAS:7440-16-6 + CAS:7440-16-6 ChemIDplus - CAS:7440-16-6 + CAS:7440-16-6 NIST Chemistry WebBook - PMID:2936374 + PMID:2936374 Europe PMC - rhodium + rhodium IUPAC - 45Rh + 45Rh IUPAC - Rh + Rh ChEBI - rhodium + rhodium ChEBI - rodio + rodio ChEBI @@ -30491,65 +30482,65 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Mt - 0.00000 - 0.00000 - [Mt] - WebElements:Mt - meitnerium - chebi_ontology - 109Mt - Mt - Une - meitnerio - meitnerium - unnilennium - CHEBI:33361 + 0 + Mt + 0.00000 + 0.00000 + [Mt] + WebElements:Mt + meitnerium + chebi_ontology + 109Mt + Mt + Une + meitnerio + meitnerium + unnilennium + CHEBI:33361 - meitnerium atom + meitnerium atom - meitnerium + meitnerium IUPAC - 109Mt + 109Mt IUPAC - Mt + Mt IUPAC - Une + Une IUPAC - meitnerio + meitnerio ChEBI - meitnerium + meitnerium ChEBI - unnilennium + unnilennium IUPAC @@ -30559,31 +30550,31 @@ For example, A and B may be gene products and binding of B by A positively regul - group 10 elements - chebi_ontology - nickel group element - nickel group elements - CHEBI:33362 + group 10 elements + chebi_ontology + nickel group element + nickel group elements + CHEBI:33362 - nickel group element atom + nickel group element atom - group 10 elements + group 10 elements IUPAC - nickel group element + nickel group element ChEBI - nickel group elements + nickel group elements ChEBI @@ -30595,75 +30586,75 @@ For example, A and B may be gene products and binding of B by A positively regul - Chemical element (nickel group element atom) with atomic number 46. - 0 - Pd - InChI=1S/Pd - KDLHZDBZIXYQEI-UHFFFAOYSA-N - 106.42000 - 105.90348 - [Pd] - CAS:7440-05-3 - PMID:25097477 - Reaxys:4937491 - WebElements:Pd - Wikipedia:Palladium - palladium - chebi_ontology - 46Pd - Pd - paladio - CHEBI:33363 + Chemical element (nickel group element atom) with atomic number 46. + 0 + Pd + InChI=1S/Pd + KDLHZDBZIXYQEI-UHFFFAOYSA-N + 106.42000 + 105.90348 + [Pd] + CAS:7440-05-3 + PMID:25097477 + Reaxys:4937491 + WebElements:Pd + Wikipedia:Palladium + palladium + chebi_ontology + 46Pd + Pd + paladio + CHEBI:33363 - palladium + palladium - CAS:7440-05-3 + CAS:7440-05-3 ChemIDplus - CAS:7440-05-3 + CAS:7440-05-3 NIST Chemistry WebBook - PMID:25097477 + PMID:25097477 Europe PMC - Reaxys:4937491 + Reaxys:4937491 Reaxys - palladium + palladium IUPAC - 46Pd + 46Pd IUPAC - Pd + Pd IUPAC - paladio + paladio ChEBI @@ -30674,73 +30665,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Pt - InChI=1S/Pt - BASFCYQUMIYNBI-UHFFFAOYSA-N - 195.078 - 194.96479 - [Pt] - CAS:7440-06-4 - WebElements:Pt - platinum - chebi_ontology - 78Pt - Platin - Pt - platine - platino - CHEBI:33364 + 0 + Pt + InChI=1S/Pt + BASFCYQUMIYNBI-UHFFFAOYSA-N + 195.078 + 194.96479 + [Pt] + CAS:7440-06-4 + WebElements:Pt + platinum + chebi_ontology + 78Pt + Platin + Pt + platine + platino + CHEBI:33364 - platinum + platinum - CAS:7440-06-4 + CAS:7440-06-4 ChemIDplus - CAS:7440-06-4 + CAS:7440-06-4 NIST Chemistry WebBook - platinum + platinum IUPAC - 78Pt + 78Pt IUPAC - Platin + Platin ChEBI - Pt + Pt IUPAC - platine + platine ChEBI - platino + platino ChEBI @@ -30750,58 +30741,58 @@ For example, A and B may be gene products and binding of B by A positively regul - chebi_ontology - PGM - Platinmetalle - Platinoide - platinoid - platinum group metal - platinum group metals - platinum metals - CHEBI:33365 + chebi_ontology + PGM + Platinmetalle + Platinoide + platinoid + platinum group metal + platinum group metals + platinum metals + CHEBI:33365 - platinum group metal atom + platinum group metal atom - PGM + PGM ChEBI - Platinmetalle + Platinmetalle ChEBI - Platinoide + Platinoide ChEBI - platinoid + platinoid ChEBI - platinum group metal + platinum group metal ChEBI - platinum group metals + platinum group metals ChEBI - platinum metals + platinum metals ChEBI @@ -30811,38 +30802,38 @@ For example, A and B may be gene products and binding of B by A positively regul - group 11 elements - chebi_ontology - coinage metals - copper group element - copper group elements - CHEBI:33366 + group 11 elements + chebi_ontology + coinage metals + copper group element + copper group elements + CHEBI:33366 - copper group element atom + copper group element atom - group 11 elements + group 11 elements IUPAC - coinage metals + coinage metals ChEBI - copper group element + copper group element ChEBI - copper group elements + copper group elements ChEBI @@ -30852,60 +30843,60 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ds - InChI=1S/Ds - NCBMSFCPDGXTHD-UHFFFAOYSA-N - 0.00000 - 0.00000 - [Ds] - WebElements:Ds - darmstadtium - chebi_ontology - 110Ds - Ds - Uun - darmstadtio - ununnilium - CHEBI:33367 + 0 + Ds + InChI=1S/Ds + NCBMSFCPDGXTHD-UHFFFAOYSA-N + 0.00000 + 0.00000 + [Ds] + WebElements:Ds + darmstadtium + chebi_ontology + 110Ds + Ds + Uun + darmstadtio + ununnilium + CHEBI:33367 - darmstadtium + darmstadtium - darmstadtium + darmstadtium IUPAC - 110Ds + 110Ds IUPAC - Ds + Ds IUPAC - Uun + Uun IUPAC - darmstadtio + darmstadtio ChEBI - ununnilium + ununnilium IUPAC @@ -30915,76 +30906,76 @@ For example, A and B may be gene products and binding of B by A positively regul - A copper group element atom with atomic number 111. The the ninth member of the 6d series of transition metals, it is an extremely radioactive, synthetic element. Average mass is around 281. - 0 - Rg - InChI=1S/Rg - LJROPTGWFUZRDB-UHFFFAOYSA-N - 0.000 - 0.00000 - [Rg] - WebElements:Rg - Wikipedia:Roentgenium - roentgenium - chebi_ontology - 111Rg - Rg - Roentgenium - Uuu - roentgenio - roentgenium - unununium - CHEBI:33368 + A copper group element atom with atomic number 111. The the ninth member of the 6d series of transition metals, it is an extremely radioactive, synthetic element. Average mass is around 281. + 0 + Rg + InChI=1S/Rg + LJROPTGWFUZRDB-UHFFFAOYSA-N + 0.000 + 0.00000 + [Rg] + WebElements:Rg + Wikipedia:Roentgenium + roentgenium + chebi_ontology + 111Rg + Rg + Roentgenium + Uuu + roentgenio + roentgenium + unununium + CHEBI:33368 - roentgenium atom + roentgenium atom - roentgenium + roentgenium IUPAC - 111Rg + 111Rg IUPAC - Rg + Rg IUPAC - Roentgenium + Roentgenium ChEBI - Uuu + Uuu ChEBI - roentgenio + roentgenio ChEBI - roentgenium + roentgenium ChEBI - unununium + unununium ChEBI @@ -30995,86 +30986,86 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ce - InChI=1S/Ce - GWXLDORMOJMVQZ-UHFFFAOYSA-N - 140.11600 - 139.90544 - [Ce] - CAS:7440-45-1 - Gmelin:16275 - WebElements:Ce - cerium - chebi_ontology - 58Ce - Ce - Cer - Zer - cerio - CHEBI:33369 + 0 + Ce + InChI=1S/Ce + GWXLDORMOJMVQZ-UHFFFAOYSA-N + 140.11600 + 139.90544 + [Ce] + CAS:7440-45-1 + Gmelin:16275 + WebElements:Ce + cerium + chebi_ontology + 58Ce + Ce + Cer + Zer + cerio + CHEBI:33369 - cerium + cerium - CAS:7440-45-1 + CAS:7440-45-1 ChemIDplus - CAS:7440-45-1 + CAS:7440-45-1 NIST Chemistry WebBook - Gmelin:16275 + Gmelin:16275 Gmelin - cerium + cerium ChEBI - cerium + cerium IUPAC - 58Ce + 58Ce IUPAC - Ce + Ce IUPAC - Cer + Cer ChEBI - Zer + Zer ChEBI - cerio + cerio ChEBI @@ -31084,59 +31075,59 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [99Tc] - InChI=1S/Tc/i1+1 - GKLVYJBZJHMRIY-OUBTZVSYSA-N - 98.906 - 98.90625 - [99Tc] - CAS:14133-76-7 - Gmelin:41657 - technetium-99 - chebi_ontology - (99)43Tc - (99)Tc - technetium, isotope of mass 99 - CHEBI:33371 + 0 + [99Tc] + InChI=1S/Tc/i1+1 + GKLVYJBZJHMRIY-OUBTZVSYSA-N + 98.906 + 98.90625 + [99Tc] + CAS:14133-76-7 + Gmelin:41657 + technetium-99 + chebi_ontology + (99)43Tc + (99)Tc + technetium, isotope of mass 99 + CHEBI:33371 - technetium-99 + technetium-99 - CAS:14133-76-7 + CAS:14133-76-7 ChemIDplus - Gmelin:41657 + Gmelin:41657 Gmelin - technetium-99 + technetium-99 IUPAC - (99)43Tc + (99)43Tc IUPAC - (99)Tc + (99)Tc IUPAC - technetium, isotope of mass 99 + technetium, isotope of mass 99 ChemIDplus @@ -31147,87 +31138,87 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Nd - InChI=1S/Nd - QEFYFXOXNSNQGX-UHFFFAOYSA-N - 144.24000 - 141.90773 - [Nd] - CAS:7440-00-8 - Gmelin:16212 - WebElements:Nd - neodymium - chebi_ontology - 60Nd - Nd - Neodym - neodimio - neodyme - neodymium - CHEBI:33372 + 0 + Nd + InChI=1S/Nd + QEFYFXOXNSNQGX-UHFFFAOYSA-N + 144.24000 + 141.90773 + [Nd] + CAS:7440-00-8 + Gmelin:16212 + WebElements:Nd + neodymium + chebi_ontology + 60Nd + Nd + Neodym + neodimio + neodyme + neodymium + CHEBI:33372 - neodymium atom + neodymium atom - CAS:7440-00-8 + CAS:7440-00-8 ChemIDplus - CAS:7440-00-8 + CAS:7440-00-8 NIST Chemistry WebBook - Gmelin:16212 + Gmelin:16212 Gmelin - neodymium + neodymium IUPAC - 60Nd + 60Nd IUPAC - Nd + Nd IUPAC - Neodym + Neodym ChEBI - neodimio + neodimio ChEBI - neodyme + neodyme ChEBI - neodymium + neodymium ChEBI @@ -31238,80 +31229,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Pm - InChI=1S/Pm - VQMWBBYLQSCNPO-UHFFFAOYSA-N - 145.00000 - 145.00000 - [Pm] - CAS:7440-12-2 - Gmelin:16237 - WebElements:Pm - promethium - chebi_ontology - 61Pm - Pm - Promethium - promethium - prometio - CHEBI:33373 + 0 + Pm + InChI=1S/Pm + VQMWBBYLQSCNPO-UHFFFAOYSA-N + 145.00000 + 145.00000 + [Pm] + CAS:7440-12-2 + Gmelin:16237 + WebElements:Pm + promethium + chebi_ontology + 61Pm + Pm + Promethium + promethium + prometio + CHEBI:33373 - promethium atom + promethium atom - CAS:7440-12-2 + CAS:7440-12-2 ChemIDplus - CAS:7440-12-2 + CAS:7440-12-2 NIST Chemistry WebBook - Gmelin:16237 + Gmelin:16237 Gmelin - promethium + promethium IUPAC - 61Pm + 61Pm IUPAC - Pm + Pm IUPAC - Promethium + Promethium ChEBI - promethium + promethium ChEBI - prometio + prometio ChEBI @@ -31322,73 +31313,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Sm - InChI=1S/Sm - KZUNJOHGWZRPMI-UHFFFAOYSA-N - 150.36000 - 151.91974 - [Sm] - CAS:7440-19-9 - Gmelin:16301 - WebElements:Sm - samarium - chebi_ontology - 62Sm - Sm - samario - samarium - CHEBI:33374 + 0 + Sm + InChI=1S/Sm + KZUNJOHGWZRPMI-UHFFFAOYSA-N + 150.36000 + 151.91974 + [Sm] + CAS:7440-19-9 + Gmelin:16301 + WebElements:Sm + samarium + chebi_ontology + 62Sm + Sm + samario + samarium + CHEBI:33374 - samarium atom + samarium atom - CAS:7440-19-9 + CAS:7440-19-9 ChemIDplus - CAS:7440-19-9 + CAS:7440-19-9 NIST Chemistry WebBook - Gmelin:16301 + Gmelin:16301 Gmelin - samarium + samarium IUPAC - 62Sm + 62Sm IUPAC - Sm + Sm IUPAC - samario + samario ChEBI - samarium + samarium ChEBI @@ -31399,73 +31390,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Gd - InChI=1S/Gd - UIWYJDYFSGRHKR-UHFFFAOYSA-N - 157.25000 - 157.92411 - [Gd] - CAS:7440-54-2 - Gmelin:16286 - WebElements:Gd - gadolinium - chebi_ontology - 64Gd - Gd - gadolinio - gadolinium - CHEBI:33375 + 0 + Gd + InChI=1S/Gd + UIWYJDYFSGRHKR-UHFFFAOYSA-N + 157.25000 + 157.92411 + [Gd] + CAS:7440-54-2 + Gmelin:16286 + WebElements:Gd + gadolinium + chebi_ontology + 64Gd + Gd + gadolinio + gadolinium + CHEBI:33375 - gadolinium atom + gadolinium atom - CAS:7440-54-2 + CAS:7440-54-2 ChemIDplus - CAS:7440-54-2 + CAS:7440-54-2 NIST Chemistry WebBook - Gmelin:16286 + Gmelin:16286 Gmelin - gadolinium + gadolinium IUPAC - 64Gd + 64Gd IUPAC - Gd + Gd IUPAC - gadolinio + gadolinio ChEBI - gadolinium + gadolinium ChEBI @@ -31476,73 +31467,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Tb - InChI=1S/Tb - GZCRRIHWUXGPOV-UHFFFAOYSA-N - 158.92534 - 158.92535 - [Tb] - CAS:7440-27-9 - Gmelin:16311 - WebElements:Tb - terbium - chebi_ontology - 65Tb - Tb - terbio - terbium - CHEBI:33376 + 0 + Tb + InChI=1S/Tb + GZCRRIHWUXGPOV-UHFFFAOYSA-N + 158.92534 + 158.92535 + [Tb] + CAS:7440-27-9 + Gmelin:16311 + WebElements:Tb + terbium + chebi_ontology + 65Tb + Tb + terbio + terbium + CHEBI:33376 - terbium atom + terbium atom - CAS:7440-27-9 + CAS:7440-27-9 ChemIDplus - CAS:7440-27-9 + CAS:7440-27-9 NIST Chemistry WebBook - Gmelin:16311 + Gmelin:16311 Gmelin - terbium + terbium IUPAC - 65Tb + 65Tb IUPAC - Tb + Tb IUPAC - terbio + terbio ChEBI - terbium + terbium ChEBI @@ -31553,73 +31544,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Dy - InChI=1S/Dy - KBQHZAAAGSGFKK-UHFFFAOYSA-N - 162.50000 - 163.92918 - [Dy] - CAS:7429-91-6 - Gmelin:16278 - WebElements:Dy - dysprosium - chebi_ontology - 66Dy - Dy - disprosio - dysprosium - CHEBI:33377 + 0 + Dy + InChI=1S/Dy + KBQHZAAAGSGFKK-UHFFFAOYSA-N + 162.50000 + 163.92918 + [Dy] + CAS:7429-91-6 + Gmelin:16278 + WebElements:Dy + dysprosium + chebi_ontology + 66Dy + Dy + disprosio + dysprosium + CHEBI:33377 - dysprosium atom + dysprosium atom - CAS:7429-91-6 + CAS:7429-91-6 ChemIDplus - CAS:7429-91-6 + CAS:7429-91-6 NIST Chemistry WebBook - Gmelin:16278 + Gmelin:16278 Gmelin - dysprosium + dysprosium IUPAC - 66Dy + 66Dy IUPAC - Dy + Dy IUPAC - disprosio + disprosio ChEBI - dysprosium + dysprosium ChEBI @@ -31630,66 +31621,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Er - InChI=1S/Er - UYAHIZSMUZPPFV-UHFFFAOYSA-N - 167.26000 - 165.93030 - [Er] - CAS:7440-52-0 - Gmelin:16280 - WebElements:Er - erbium - chebi_ontology - 68Er - Er - erbio - CHEBI:33379 + 0 + Er + InChI=1S/Er + UYAHIZSMUZPPFV-UHFFFAOYSA-N + 167.26000 + 165.93030 + [Er] + CAS:7440-52-0 + Gmelin:16280 + WebElements:Er + erbium + chebi_ontology + 68Er + Er + erbio + CHEBI:33379 - erbium + erbium - CAS:7440-52-0 + CAS:7440-52-0 ChemIDplus - CAS:7440-52-0 + CAS:7440-52-0 NIST Chemistry WebBook - Gmelin:16280 + Gmelin:16280 Gmelin - erbium + erbium IUPAC - 68Er + 68Er IUPAC - Er + Er IUPAC - erbio + erbio ChEBI @@ -31700,73 +31691,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Tm - InChI=1S/Tm - FRNOGLGSGLTDKL-UHFFFAOYSA-N - 168.93421 - 168.93422 - [Tm] - CAS:7440-30-4 - Gmelin:16307 - WebElements:Tm - thulium - chebi_ontology - 69Tm - Tm - thulium - tulio - CHEBI:33380 + 0 + Tm + InChI=1S/Tm + FRNOGLGSGLTDKL-UHFFFAOYSA-N + 168.93421 + 168.93422 + [Tm] + CAS:7440-30-4 + Gmelin:16307 + WebElements:Tm + thulium + chebi_ontology + 69Tm + Tm + thulium + tulio + CHEBI:33380 - thulium atom + thulium atom - CAS:7440-30-4 + CAS:7440-30-4 ChemIDplus - CAS:7440-30-4 + CAS:7440-30-4 NIST Chemistry WebBook - Gmelin:16307 + Gmelin:16307 Gmelin - thulium + thulium IUPAC - 69Tm + 69Tm IUPAC - Tm + Tm ChEBI - thulium + thulium ChEBI - tulio + tulio ChEBI @@ -31777,66 +31768,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Yb - InChI=1S/Yb - NAWDYIZEMPQZHO-UHFFFAOYSA-N - 173.04000 - 173.93887 - [Yb] - CAS:7440-64-4 - Gmelin:16320 - WebElements:Yb - ytterbium - chebi_ontology - 70Yb - Yb - yterbio - CHEBI:33381 + 0 + Yb + InChI=1S/Yb + NAWDYIZEMPQZHO-UHFFFAOYSA-N + 173.04000 + 173.93887 + [Yb] + CAS:7440-64-4 + Gmelin:16320 + WebElements:Yb + ytterbium + chebi_ontology + 70Yb + Yb + yterbio + CHEBI:33381 - ytterbium + ytterbium - CAS:7440-64-4 + CAS:7440-64-4 ChemIDplus - CAS:7440-64-4 + CAS:7440-64-4 NIST Chemistry WebBook - Gmelin:16320 + Gmelin:16320 Gmelin - ytterbium + ytterbium IUPAC - 70Yb + 70Yb IUPAC - Yb + Yb IUPAC - yterbio + yterbio ChEBI @@ -31847,101 +31838,101 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Lu - InChI=1S/Lu - OHSVLFRHMCKCQY-UHFFFAOYSA-N - 174.96700 - 174.94078 - [Lu] - CAS:7439-94-3 - Gmelin:16202 - WebElements:Lu - lutetium - chebi_ontology - 71Lu - Cassiopeium - Lu - Lutetium - cassiopium - lutecio - lutecium - lutetium - CHEBI:33382 + 0 + Lu + InChI=1S/Lu + OHSVLFRHMCKCQY-UHFFFAOYSA-N + 174.96700 + 174.94078 + [Lu] + CAS:7439-94-3 + Gmelin:16202 + WebElements:Lu + lutetium + chebi_ontology + 71Lu + Cassiopeium + Lu + Lutetium + cassiopium + lutecio + lutecium + lutetium + CHEBI:33382 - lutetium atom + lutetium atom - CAS:7439-94-3 + CAS:7439-94-3 ChemIDplus - CAS:7439-94-3 + CAS:7439-94-3 NIST Chemistry WebBook - Gmelin:16202 + Gmelin:16202 Gmelin - lutetium + lutetium IUPAC - 71Lu + 71Lu IUPAC - Cassiopeium + Cassiopeium ChEBI - Lu + Lu IUPAC - Lutetium + Lutetium ChEBI - cassiopium + cassiopium ChEBI - lutecio + lutecio ChEBI - lutecium + lutecium ChEBI - lutetium + lutetium ChEBI @@ -31951,66 +31942,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Th - InChI=1S/Th - ZSLUVFAKFWKJRC-UHFFFAOYSA-N - 232.03810 - 232.03806 - [Th] - CAS:7440-29-1 - KEGG:C19157 - WebElements:Th - thorium - chebi_ontology - 90Th - Th - torio - CHEBI:33385 + 0 + Th + InChI=1S/Th + ZSLUVFAKFWKJRC-UHFFFAOYSA-N + 232.03810 + 232.03806 + [Th] + CAS:7440-29-1 + KEGG:C19157 + WebElements:Th + thorium + chebi_ontology + 90Th + Th + torio + CHEBI:33385 - thorium + thorium - CAS:7440-29-1 + CAS:7440-29-1 ChemIDplus - CAS:7440-29-1 + CAS:7440-29-1 KEGG COMPOUND - CAS:7440-29-1 + CAS:7440-29-1 NIST Chemistry WebBook - thorium + thorium IUPAC - 90Th + 90Th IUPAC - Th + Th IUPAC - torio + torio ChEBI @@ -32020,81 +32011,81 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Pa - InChI=1S/Pa - XLROVYAPLOFLNU-UHFFFAOYSA-N - 231.03588 - 231.03589 - [Pa] - CAS:7440-13-3 - WebElements:Pa - protactinium - chebi_ontology - 91Pa - Pa - brevium - protactinio - protactinium - protoactinium - CHEBI:33386 + 0 + Pa + InChI=1S/Pa + XLROVYAPLOFLNU-UHFFFAOYSA-N + 231.03588 + 231.03589 + [Pa] + CAS:7440-13-3 + WebElements:Pa + protactinium + chebi_ontology + 91Pa + Pa + brevium + protactinio + protactinium + protoactinium + CHEBI:33386 - protactinium atom + protactinium atom - CAS:7440-13-3 + CAS:7440-13-3 ChemIDplus - CAS:7440-13-3 + CAS:7440-13-3 NIST Chemistry WebBook - protactinium + protactinium IUPAC - 91Pa + 91Pa IUPAC - Pa + Pa IUPAC - brevium + brevium ChEBI - protactinio + protactinio ChEBI - protactinium + protactinium ChEBI - protoactinium - NIST_Chemistry_WebBook + protoactinium + NIST_Chemistry_WebBook @@ -32103,66 +32094,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Np - InChI=1S/Np - LFNLGNPSGWYGGD-UHFFFAOYSA-N - 237.00000 - 237.00000 - [Np] - CAS:7439-99-8 - WebElements:Np - neptunium - chebi_ontology - 93Np - Np - neptunio - neptunium - CHEBI:33387 + 0 + Np + InChI=1S/Np + LFNLGNPSGWYGGD-UHFFFAOYSA-N + 237.00000 + 237.00000 + [Np] + CAS:7439-99-8 + WebElements:Np + neptunium + chebi_ontology + 93Np + Np + neptunio + neptunium + CHEBI:33387 - neptunium atom + neptunium atom - CAS:7439-99-8 + CAS:7439-99-8 ChemIDplus - CAS:7439-99-8 + CAS:7439-99-8 NIST Chemistry WebBook - neptunium + neptunium IUPAC - 93Np + 93Np IUPAC - Np + Np IUPAC - neptunio + neptunio ChEBI - neptunium + neptunium ChEBI @@ -32172,73 +32163,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Pu - InChI=1S/Pu - OYEHPCDNVJXUIW-UHFFFAOYSA-N - 244.00000 - 244.00000 - [Pu] - CAS:7440-07-5 - KEGG:C19159 - WebElements:Pu - plutonium - chebi_ontology - 94Pu - Pu - plutonio - plutonium - CHEBI:33388 + 0 + Pu + InChI=1S/Pu + OYEHPCDNVJXUIW-UHFFFAOYSA-N + 244.00000 + 244.00000 + [Pu] + CAS:7440-07-5 + KEGG:C19159 + WebElements:Pu + plutonium + chebi_ontology + 94Pu + Pu + plutonio + plutonium + CHEBI:33388 - plutonium atom + plutonium atom - CAS:7440-07-5 + CAS:7440-07-5 ChemIDplus - CAS:7440-07-5 + CAS:7440-07-5 KEGG COMPOUND - CAS:7440-07-5 + CAS:7440-07-5 NIST Chemistry WebBook - plutonium + plutonium IUPAC - 94Pu + 94Pu IUPAC - Pu + Pu ChEBI - plutonio + plutonio ChEBI - plutonium + plutonium ChEBI @@ -32248,80 +32239,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Am - InChI=1S/Am - LXQXZNRPTYVCNG-UHFFFAOYSA-N - 243.00000 - 243.00000 - [Am] - CAS:7440-35-9 - WebElements:Am - americium - chebi_ontology - 95Am - Am - Americium - Amerizium - americio - americium - CHEBI:33389 + 0 + Am + InChI=1S/Am + LXQXZNRPTYVCNG-UHFFFAOYSA-N + 243.00000 + 243.00000 + [Am] + CAS:7440-35-9 + WebElements:Am + americium + chebi_ontology + 95Am + Am + Americium + Amerizium + americio + americium + CHEBI:33389 - americium atom + americium atom - CAS:7440-35-9 + CAS:7440-35-9 ChemIDplus - CAS:7440-35-9 + CAS:7440-35-9 NIST Chemistry WebBook - americium + americium IUPAC - 95Am + 95Am IUPAC - Am + Am IUPAC - Americium + Americium ChEBI - Amerizium + Amerizium ChEBI - americio + americio ChEBI - americium + americium ChEBI @@ -32331,66 +32322,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Cm - InChI=1S/Cm - NIWWFAAXEMMFMS-UHFFFAOYSA-N - 247.00000 - 247.00000 - [Cm] - CAS:7440-51-9 - WebElements:Cm - curium - chebi_ontology - 96Cm - Cm - curio - curium - CHEBI:33390 + 0 + Cm + InChI=1S/Cm + NIWWFAAXEMMFMS-UHFFFAOYSA-N + 247.00000 + 247.00000 + [Cm] + CAS:7440-51-9 + WebElements:Cm + curium + chebi_ontology + 96Cm + Cm + curio + curium + CHEBI:33390 - curium atom + curium atom - CAS:7440-51-9 + CAS:7440-51-9 ChemIDplus - CAS:7440-51-9 + CAS:7440-51-9 NIST Chemistry WebBook - curium + curium IUPAC - 96Cm + 96Cm IUPAC - Cm + Cm IUPAC - curio + curio ChEBI - curium + curium ChEBI @@ -32400,73 +32391,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Bk - InChI=1S/Bk - PWVKJRSRVJTHTR-UHFFFAOYSA-N - 247.00000 - 247.00000 - [Bk] - CAS:7440-40-6 - WebElements:Bk - berkelium - chebi_ontology - 97Bk - Berkelium - Bk - berkelio - berkelium - CHEBI:33391 + 0 + Bk + InChI=1S/Bk + PWVKJRSRVJTHTR-UHFFFAOYSA-N + 247.00000 + 247.00000 + [Bk] + CAS:7440-40-6 + WebElements:Bk + berkelium + chebi_ontology + 97Bk + Berkelium + Bk + berkelio + berkelium + CHEBI:33391 - berkelium atom + berkelium atom - CAS:7440-40-6 + CAS:7440-40-6 ChemIDplus - CAS:7440-40-6 + CAS:7440-40-6 NIST Chemistry WebBook - berkelium + berkelium IUPAC - 97Bk + 97Bk IUPAC - Berkelium + Berkelium ChEBI - Bk + Bk ChEBI - berkelio + berkelio ChEBI - berkelium + berkelium ChEBI @@ -32476,73 +32467,73 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Cf - InChI=1S/Cf - HGLDOAKPQXAFKI-UHFFFAOYSA-N - 251.00000 - 251.00000 - [Cf] - CAS:7440-71-3 - WebElements:Cf - californium - chebi_ontology - 98Cf - Cf - Kalifornium - californio - californium - CHEBI:33392 + 0 + Cf + InChI=1S/Cf + HGLDOAKPQXAFKI-UHFFFAOYSA-N + 251.00000 + 251.00000 + [Cf] + CAS:7440-71-3 + WebElements:Cf + californium + chebi_ontology + 98Cf + Cf + Kalifornium + californio + californium + CHEBI:33392 - californium atom + californium atom - CAS:7440-71-3 + CAS:7440-71-3 ChemIDplus - CAS:7440-71-3 + CAS:7440-71-3 NIST Chemistry WebBook - californium + californium IUPAC - 98Cf + 98Cf ChEBI - Cf + Cf IUPAC - Kalifornium + Kalifornium ChEBI - californio + californio ChEBI - californium + californium ChEBI @@ -32552,66 +32543,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Es - InChI=1S/Es - CKBRQZNRCSJHFT-UHFFFAOYSA-N - 252.00000 - 252.00000 - [Es] - CAS:7429-92-7 - WebElements:Es - einsteinium - chebi_ontology - 99Es - Es - einsteinio - einsteinium - CHEBI:33393 + 0 + Es + InChI=1S/Es + CKBRQZNRCSJHFT-UHFFFAOYSA-N + 252.00000 + 252.00000 + [Es] + CAS:7429-92-7 + WebElements:Es + einsteinium + chebi_ontology + 99Es + Es + einsteinio + einsteinium + CHEBI:33393 - einsteinium atom + einsteinium atom - CAS:7429-92-7 + CAS:7429-92-7 ChemIDplus - CAS:7429-92-7 + CAS:7429-92-7 NIST Chemistry WebBook - einsteinium + einsteinium IUPAC - 99Es + 99Es IUPAC - Es + Es IUPAC - einsteinio + einsteinio ChEBI - einsteinium + einsteinium ChEBI @@ -32621,59 +32612,59 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Fm - InChI=1S/Fm - MIORUQGGZCBUGO-UHFFFAOYSA-N - 257.00000 - 257.00000 - [Fm] - CAS:7440-72-4 - WebElements:Fm - fermium - chebi_ontology - 100Fm - Fm - fermio - CHEBI:33394 + 0 + Fm + InChI=1S/Fm + MIORUQGGZCBUGO-UHFFFAOYSA-N + 257.00000 + 257.00000 + [Fm] + CAS:7440-72-4 + WebElements:Fm + fermium + chebi_ontology + 100Fm + Fm + fermio + CHEBI:33394 - fermium + fermium - CAS:7440-72-4 + CAS:7440-72-4 ChemIDplus - CAS:7440-72-4 + CAS:7440-72-4 NIST Chemistry WebBook - fermium + fermium IUPAC - 100Fm + 100Fm IUPAC - Fm + Fm IUPAC - fermio + fermio ChEBI @@ -32683,87 +32674,87 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Md - InChI=1S/Md - MQVSLOYRCXQRPM-UHFFFAOYSA-N - 258.00000 - 258.00000 - [Md] - CAS:7440-11-1 - WebElements:Md - mendelevium - chebi_ontology - 101Md - Md - Mendelevium - Unu - mendelevio - mendelevium - unnilunium - CHEBI:33395 + 0 + Md + InChI=1S/Md + MQVSLOYRCXQRPM-UHFFFAOYSA-N + 258.00000 + 258.00000 + [Md] + CAS:7440-11-1 + WebElements:Md + mendelevium + chebi_ontology + 101Md + Md + Mendelevium + Unu + mendelevio + mendelevium + unnilunium + CHEBI:33395 - mendelevium atom + mendelevium atom - CAS:7440-11-1 + CAS:7440-11-1 ChemIDplus - CAS:7440-11-1 + CAS:7440-11-1 NIST Chemistry WebBook - mendelevium + mendelevium IUPAC - 101Md + 101Md IUPAC - Md + Md IUPAC - Mendelevium + Mendelevium ChEBI - Unu + Unu IUPAC - mendelevio + mendelevio ChEBI - mendelevium + mendelevium ChEBI - unnilunium + unnilunium IUPAC @@ -32773,86 +32764,86 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - No - InChI=1S/No - ORQBXQOJMQIAOY-UHFFFAOYSA-N - 259.00000 - 259.00000 - [No] - CAS:10028-14-5 - WebElements:No - Nobelium - nobelium - chebi_ontology - 102No - No - Unb - nobelio - unnilbium - CHEBI:33396 + 0 + No + InChI=1S/No + ORQBXQOJMQIAOY-UHFFFAOYSA-N + 259.00000 + 259.00000 + [No] + CAS:10028-14-5 + WebElements:No + Nobelium + nobelium + chebi_ontology + 102No + No + Unb + nobelio + unnilbium + CHEBI:33396 - nobelium + nobelium - CAS:10028-14-5 + CAS:10028-14-5 ChemIDplus - CAS:10028-14-5 + CAS:10028-14-5 NIST Chemistry WebBook - Nobelium + Nobelium ChEBI - nobelium + nobelium ChEBI - nobelium + nobelium IUPAC - 102No + 102No IUPAC - No + No IUPAC - Unb + Unb IUPAC - nobelio + nobelio ChEBI - unnilbium + unnilbium IUPAC @@ -32863,81 +32854,81 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Lr - InChI=1S/Lr - CNQCVBJFEGMYDW-UHFFFAOYSA-N - 262.00000 - 262.00000 - [Lr] - CAS:22537-19-5 - WebElements:Lr - lawrencium - chebi_ontology - 103Lr - Lr - Unt - laurencio - lawrencio - lawrencium - unniltrium - CHEBI:33397 + 0 + Lr + InChI=1S/Lr + CNQCVBJFEGMYDW-UHFFFAOYSA-N + 262.00000 + 262.00000 + [Lr] + CAS:22537-19-5 + WebElements:Lr + lawrencium + chebi_ontology + 103Lr + Lr + Unt + laurencio + lawrencio + lawrencium + unniltrium + CHEBI:33397 - lawrencium atom + lawrencium atom - CAS:22537-19-5 + CAS:22537-19-5 ChemIDplus - lawrencium + lawrencium IUPAC - 103Lr + 103Lr IUPAC - Lr + Lr IUPAC - Unt + Unt IUPAC - laurencio + laurencio ChEBI - lawrencio + lawrencio ChEBI - lawrencium + lawrencium ChEBI - unniltrium + unniltrium IUPAC @@ -33234,80 +33225,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [220Rn] - InChI=1S/Rn/i1-2 - SYUHGPGVQRZVTB-YPZZEJLDSA-N - 220.011 - 220.01138 - [220Rn] - CAS:22481-48-7 - Gmelin:297037 - radon-220 - chebi_ontology - (220)86Rn - (220)Rn - Tn - radon, isotope of mass 220 - radon-220 - thoron - CHEBI:33491 + 0 + [220Rn] + InChI=1S/Rn/i1-2 + SYUHGPGVQRZVTB-YPZZEJLDSA-N + 220.011 + 220.01138 + [220Rn] + CAS:22481-48-7 + Gmelin:297037 + radon-220 + chebi_ontology + (220)86Rn + (220)Rn + Tn + radon, isotope of mass 220 + radon-220 + thoron + CHEBI:33491 - radon-220 atom + radon-220 atom - CAS:22481-48-7 + CAS:22481-48-7 ChemIDplus - Gmelin:297037 + Gmelin:297037 Gmelin - radon-220 + radon-220 IUPAC - (220)86Rn + (220)86Rn IUPAC - (220)Rn + (220)Rn IUPAC - Tn + Tn ChEBI - radon, isotope of mass 220 + radon, isotope of mass 220 ChemIDplus - radon-220 + radon-220 ChEBI - thoron + thoron ChemIDplus @@ -33317,59 +33308,59 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [222Rn] - InChI=1S/Rn/i1+0 - SYUHGPGVQRZVTB-IGMARMGPSA-N - 222.018 - 222.01757 - [222Rn] - CAS:14859-67-7 - radon-222 - chebi_ontology - (222)86Rn - (222)Rn - radon, isotope of mass 222 - radon-222 - CHEBI:33492 + 0 + [222Rn] + InChI=1S/Rn/i1+0 + SYUHGPGVQRZVTB-IGMARMGPSA-N + 222.018 + 222.01757 + [222Rn] + CAS:14859-67-7 + radon-222 + chebi_ontology + (222)86Rn + (222)Rn + radon, isotope of mass 222 + radon-222 + CHEBI:33492 - radon-222 atom + radon-222 atom - CAS:14859-67-7 + CAS:14859-67-7 ChemIDplus - radon-222 + radon-222 IUPAC - (222)86Rn + (222)86Rn IUPAC - (222)Rn + (222)Rn IUPAC - radon, isotope of mass 222 + radon, isotope of mass 222 ChemIDplus - radon-222 + radon-222 ChEBI @@ -33379,80 +33370,80 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [219Rn] - InChI=1S/Rn/i1-3 - SYUHGPGVQRZVTB-OIOBTWANSA-N - 219.009 - 219.00947 - [219Rn] - CAS:14835-02-0 - Gmelin:297039 - radon-219 - chebi_ontology - (219)86Rn - (219)Rn - An - actinon - radon, isotope of mass 219 - radon-219 - CHEBI:33493 + 0 + [219Rn] + InChI=1S/Rn/i1-3 + SYUHGPGVQRZVTB-OIOBTWANSA-N + 219.009 + 219.00947 + [219Rn] + CAS:14835-02-0 + Gmelin:297039 + radon-219 + chebi_ontology + (219)86Rn + (219)Rn + An + actinon + radon, isotope of mass 219 + radon-219 + CHEBI:33493 - radon-219 atom + radon-219 atom - CAS:14835-02-0 + CAS:14835-02-0 ChemIDplus - Gmelin:297039 + Gmelin:297039 Gmelin - radon-219 + radon-219 IUPAC - (219)86Rn + (219)86Rn IUPAC - (219)Rn + (219)Rn IUPAC - An + An ChEBI - actinon + actinon ChEBI - radon, isotope of mass 219 + radon, isotope of mass 219 ChemIDplus - radon-219 + radon-219 ChEBI @@ -33511,74 +33502,74 @@ For example, A and B may be gene products and binding of B by A positively regul - A zinc group element atom with a symbol Cn and atomic number 112. All its isotopes are intensely radioactive. Prior to its discovery, it had the placeholder name ununbium (in accordance with IUPAC recommendations). Following its discovery (in Darmstadt, 1996) and subsequent confirmation, the name copernicium was adopted in 2010. - 0 - Cn - InChI=1S/Cn - NOTIIDSZELDPOP-UHFFFAOYSA-N - NaN - 0.00000 - [Cn] - Wikipedia:Copernicium - copernicium - chebi_ontology - 112Cn - 112Cp - 112Uub - Cn - Uub - ununbium - CHEBI:33517 + A zinc group element atom with a symbol Cn and atomic number 112. All its isotopes are intensely radioactive. Prior to its discovery, it had the placeholder name ununbium (in accordance with IUPAC recommendations). Following its discovery (in Darmstadt, 1996) and subsequent confirmation, the name copernicium was adopted in 2010. + 0 + Cn + InChI=1S/Cn + NOTIIDSZELDPOP-UHFFFAOYSA-N + NaN + 0.00000 + [Cn] + Wikipedia:Copernicium + copernicium + chebi_ontology + 112Cn + 112Cp + 112Uub + Cn + Uub + ununbium + CHEBI:33517 - copernicium atom + copernicium atom - copernicium + copernicium IUPAC - 112Cn + 112Cn ChEBI - 112Cp + 112Cp IUPAC - 112Uub + 112Uub IUPAC - Cn + Cn IUPAC - Uub + Uub IUPAC - ununbium + ununbium ChEBI - ununbium + ununbium IUPAC @@ -33588,26 +33579,26 @@ For example, A and B may be gene products and binding of B by A positively regul - An atom of an element that exhibits typical metallic properties, being typically shiny, with high electrical and thermal conductivity. - CHEBI:25217 - CHEBI:6788 - KEGG:C00050 - PMID:21784043 - Wikipedia:Metal - chebi_ontology + An atom of an element that exhibits typical metallic properties, being typically shiny, with high electrical and thermal conductivity. + CHEBI:25217 + CHEBI:6788 + KEGG:C00050 + PMID:21784043 + Wikipedia:Metal + chebi_ontology elemental metal elemental metals metal element metal elements metals - CHEBI:33521 + CHEBI:33521 - metal atom + metal atom - PMID:21784043 + PMID:21784043 Europe PMC @@ -33740,12 +33731,12 @@ For example, A and B may be gene products and binding of B by A positively regul - chebi_ontology + chebi_ontology d-block element d-block elements - CHEBI:33561 + CHEBI:33561 - d-block element atom + d-block element atom @@ -33766,23 +33757,23 @@ For example, A and B may be gene products and binding of B by A positively regul - chebi_ontology - f-block element - f-block elements - CHEBI:33562 + chebi_ontology + f-block element + f-block elements + CHEBI:33562 - f-block element atom + f-block element atom - f-block element + f-block element ChEBI - f-block elements + f-block elements ChEBI @@ -35472,81 +35463,81 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of oxygen with relative atomic mass 17.999160 and 0.205 atom percent natural abundance. - 0 - [18O] - InChI=1S/O/i1+2 - QVGXLLKOCUKJST-NJFSPNSNSA-N - 17.999 - 17.99916 - [18O] - CAS:14797-71-8 - Gmelin:17562 - oxygen-18 - chebi_ontology - (18)8O - (18)O - heavy oxygen - oxygen, isotope of mass 18 - oxygen-18 - schwerer Sauerstoff - CHEBI:33815 + The stable isotope of oxygen with relative atomic mass 17.999160 and 0.205 atom percent natural abundance. + 0 + [18O] + InChI=1S/O/i1+2 + QVGXLLKOCUKJST-NJFSPNSNSA-N + 17.999 + 17.99916 + [18O] + CAS:14797-71-8 + Gmelin:17562 + oxygen-18 + chebi_ontology + (18)8O + (18)O + heavy oxygen + oxygen, isotope of mass 18 + oxygen-18 + schwerer Sauerstoff + CHEBI:33815 - oxygen-18 atom + oxygen-18 atom - CAS:14797-71-8 + CAS:14797-71-8 ChemIDplus - Gmelin:17562 + Gmelin:17562 Gmelin - oxygen-18 + oxygen-18 IUPAC - (18)8O + (18)8O IUPAC - (18)O + (18)O IUPAC - heavy oxygen + heavy oxygen ChEBI - oxygen, isotope of mass 18 + oxygen, isotope of mass 18 ChemIDplus - oxygen-18 + oxygen-18 ChEBI - schwerer Sauerstoff + schwerer Sauerstoff ChEBI @@ -35556,53 +35547,53 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of oxygen with relative atomic mass 15.994914. The most abundant (99.76 atom percent) isotope of naturally occurring oxygen. - 0 - [16O] - InChI=1S/O/i1+0 - QVGXLLKOCUKJST-IGMARMGPSA-N - 15.995 - 15.99491 - [16O] - Gmelin:17560 - oxygen-16 - chebi_ontology - (16)8O - (16)O - oxygen-16 - CHEBI:33818 + The stable isotope of oxygen with relative atomic mass 15.994914. The most abundant (99.76 atom percent) isotope of naturally occurring oxygen. + 0 + [16O] + InChI=1S/O/i1+0 + QVGXLLKOCUKJST-IGMARMGPSA-N + 15.995 + 15.99491 + [16O] + Gmelin:17560 + oxygen-16 + chebi_ontology + (16)8O + (16)O + oxygen-16 + CHEBI:33818 - oxygen-16 atom + oxygen-16 atom - Gmelin:17560 + Gmelin:17560 Gmelin - oxygen-16 + oxygen-16 IUPAC - (16)8O + (16)8O IUPAC - (16)O + (16)O IUPAC - oxygen-16 + oxygen-16 ChEBI @@ -35612,67 +35603,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of oxygen with relative atomic mass 16.999131. The least abundant (0.038 atom percent) isotope of naturally occurring oxygen. - 0 - [17O] - InChI=1S/O/i1+1 - QVGXLLKOCUKJST-OUBTZVSYSA-N - 16.999 - 16.99913 - [17O] - CAS:13968-48-4 - Gmelin:17561 - oxygen-17 - chebi_ontology - (17)8O - (17)O - oxygen, isotope of mass 17 - oxygen-17 - CHEBI:33819 + The stable isotope of oxygen with relative atomic mass 16.999131. The least abundant (0.038 atom percent) isotope of naturally occurring oxygen. + 0 + [17O] + InChI=1S/O/i1+1 + QVGXLLKOCUKJST-OUBTZVSYSA-N + 16.999 + 16.99913 + [17O] + CAS:13968-48-4 + Gmelin:17561 + oxygen-17 + chebi_ontology + (17)8O + (17)O + oxygen, isotope of mass 17 + oxygen-17 + CHEBI:33819 - oxygen-17 atom + oxygen-17 atom - CAS:13968-48-4 + CAS:13968-48-4 ChemIDplus - Gmelin:17561 + Gmelin:17561 Gmelin - oxygen-17 + oxygen-17 IUPAC - (17)8O + (17)8O IUPAC - (17)O + (17)O IUPAC - oxygen, isotope of mass 17 + oxygen, isotope of mass 17 ChemIDplus - oxygen-17 + oxygen-17 ChEBI @@ -38071,60 +38062,60 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [14C] - InChI=1S/C/i1+2 - OKTJSMMVPCPJKN-NJFSPNSNSA-N - 14.003 - 14.00324 - [14C] - CAS:14762-75-5 - Wikipedia:Carbon-14 - carbon-14 - chebi_ontology - (14)6C - (14)C - carbon, isotope of mass 14 - carbon-14 - CHEBI:36927 + 0 + [14C] + InChI=1S/C/i1+2 + OKTJSMMVPCPJKN-NJFSPNSNSA-N + 14.003 + 14.00324 + [14C] + CAS:14762-75-5 + Wikipedia:Carbon-14 + carbon-14 + chebi_ontology + (14)6C + (14)C + carbon, isotope of mass 14 + carbon-14 + CHEBI:36927 - carbon-14 atom + carbon-14 atom - CAS:14762-75-5 + CAS:14762-75-5 ChemIDplus - carbon-14 + carbon-14 IUPAC - (14)6C + (14)6C IUPAC - (14)C + (14)C IUPAC - carbon, isotope of mass 14 + carbon, isotope of mass 14 ChemIDplus - carbon-14 + carbon-14 ChEBI @@ -38134,66 +38125,66 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [13C] - InChI=1S/C/i1+1 - OKTJSMMVPCPJKN-OUBTZVSYSA-N - 13.003 - 13.00335 - [13C] - CAS:14762-74-4 - carbon-13 - carbon-13 atom - chebi_ontology - (13)6C - (13)C - carbon, isotope of mass 13 - carbon-13 - CHEBI:36928 + 0 + [13C] + InChI=1S/C/i1+1 + OKTJSMMVPCPJKN-OUBTZVSYSA-N + 13.003 + 13.00335 + [13C] + CAS:14762-74-4 + carbon-13 + carbon-13 atom + chebi_ontology + (13)6C + (13)C + carbon, isotope of mass 13 + carbon-13 + CHEBI:36928 - carbon-13 atom + carbon-13 atom - CAS:14762-74-4 + CAS:14762-74-4 ChemIDplus - carbon-13 + carbon-13 IUPAC - carbon-13 atom + carbon-13 atom ChemIDplus - (13)6C + (13)6C IUPAC - (13)C + (13)C IUPAC - carbon, isotope of mass 13 + carbon, isotope of mass 13 ChemIDplus - carbon-13 + carbon-13 ChEBI @@ -38203,59 +38194,59 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [11C] - InChI=1S/C/i1-1 - OKTJSMMVPCPJKN-BJUDXGSMSA-N - 11.011 - 11.01143 - [11C] - CAS:14333-33-6 - carbon-11 - chebi_ontology - (11)6C - (11)C - carbon, isotope of mass 11 - carbon-11 - CHEBI:36929 + 0 + [11C] + InChI=1S/C/i1-1 + OKTJSMMVPCPJKN-BJUDXGSMSA-N + 11.011 + 11.01143 + [11C] + CAS:14333-33-6 + carbon-11 + chebi_ontology + (11)6C + (11)C + carbon, isotope of mass 11 + carbon-11 + CHEBI:36929 - carbon-11 atom + carbon-11 atom - CAS:14333-33-6 + CAS:14333-33-6 ChemIDplus - carbon-11 + carbon-11 IUPAC - (11)6C + (11)6C IUPAC - (11)C + (11)C IUPAC - carbon, isotope of mass 11 + carbon, isotope of mass 11 ChemIDplus - carbon-11 + carbon-11 ChEBI @@ -38265,59 +38256,59 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [10C] - InChI=1S/C/i1-2 - OKTJSMMVPCPJKN-YPZZEJLDSA-N - 10.017 - 10.01685 - [10C] - CAS:15578-68-4 - carbon-10 - chebi_ontology - (10)6C - (10)C - carbon, isotope of mass 10 - carbon-10 - CHEBI:36930 + 0 + [10C] + InChI=1S/C/i1-2 + OKTJSMMVPCPJKN-YPZZEJLDSA-N + 10.017 + 10.01685 + [10C] + CAS:15578-68-4 + carbon-10 + chebi_ontology + (10)6C + (10)C + carbon, isotope of mass 10 + carbon-10 + CHEBI:36930 - carbon-10 atom + carbon-10 atom - CAS:15578-68-4 + CAS:15578-68-4 ChemIDplus - carbon-10 + carbon-10 IUPAC - (10)6C + (10)6C IUPAC - (10)C + (10)C IUPAC - carbon, isotope of mass 10 + carbon, isotope of mass 10 ChemIDplus - carbon-10 + carbon-10 ChEBI @@ -38327,45 +38318,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [12C] - InChI=1S/C/i1+0 - OKTJSMMVPCPJKN-IGMARMGPSA-N - 12.000 - 12.00000 - [12C] - carbon-12 - chebi_ontology - (12)6C - (12)C - carbon-12 - CHEBI:36931 + 0 + [12C] + InChI=1S/C/i1+0 + OKTJSMMVPCPJKN-IGMARMGPSA-N + 12.000 + 12.00000 + [12C] + carbon-12 + chebi_ontology + (12)6C + (12)C + carbon-12 + CHEBI:36931 - carbon-12 atom + carbon-12 atom - carbon-12 + carbon-12 IUPAC - (12)6C + (12)6C IUPAC - (12)C + (12)C IUPAC - carbon-12 + carbon-12 ChEBI @@ -38375,67 +38366,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of oxygen with relative atomic mass 15.003065. The longest-lived oxygen radionuclide with half-life of 122.2 s. - 0 - [15O] - InChI=1S/O/i1-1 - QVGXLLKOCUKJST-BJUDXGSMSA-N - 15.003 - 15.00307 - [15O] - CAS:13982-43-9 - Gmelin:316575 - oxygen-15 - chebi_ontology - (15)8O - (15)O - oxygen, isotope of mass 15 - oxygen-15 - CHEBI:36932 + The radioactive isotope of oxygen with relative atomic mass 15.003065. The longest-lived oxygen radionuclide with half-life of 122.2 s. + 0 + [15O] + InChI=1S/O/i1-1 + QVGXLLKOCUKJST-BJUDXGSMSA-N + 15.003 + 15.00307 + [15O] + CAS:13982-43-9 + Gmelin:316575 + oxygen-15 + chebi_ontology + (15)8O + (15)O + oxygen, isotope of mass 15 + oxygen-15 + CHEBI:36932 - oxygen-15 atom + oxygen-15 atom - CAS:13982-43-9 + CAS:13982-43-9 ChemIDplus - Gmelin:316575 + Gmelin:316575 Gmelin - oxygen-15 + oxygen-15 IUPAC - (15)8O + (15)8O IUPAC - (15)O + (15)O IUPAC - oxygen, isotope of mass 15 + oxygen, isotope of mass 15 ChemIDplus - oxygen-15 + oxygen-15 ChEBI @@ -38445,52 +38436,52 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [19O] - InChI=1S/O/i1+3 - QVGXLLKOCUKJST-AKLPVKDBSA-N - 19.004 - 19.00358 - [19O] - CAS:13982-18-8 - oxygen-19 - chebi_ontology - (19)8O - (19)O - oxygen-19 - CHEBI:36933 + 0 + [19O] + InChI=1S/O/i1+3 + QVGXLLKOCUKJST-AKLPVKDBSA-N + 19.004 + 19.00358 + [19O] + CAS:13982-18-8 + oxygen-19 + chebi_ontology + (19)8O + (19)O + oxygen-19 + CHEBI:36933 - oxygen-19 atom + oxygen-19 atom - CAS:13982-18-8 + CAS:13982-18-8 ChemIDplus - oxygen-19 + oxygen-19 IUPAC - (19)8O + (19)8O IUPAC - (19)O + (19)O IUPAC - oxygen-19 + oxygen-19 ChEBI @@ -38500,57 +38491,57 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of nitrogen with relative atomic mass 15.000109. The least abundant (0.368 atom percent) isotope of naturally occurring nitrogen. - 0 - N - 14.007 - 14.00307 - CAS:14390-96-6 - nitrogen-15 - chebi_ontology - (15)7N - (15)N - nitrogen, isotope of mass 15 - nitrogen-15 - CHEBI:36934 + The stable isotope of nitrogen with relative atomic mass 15.000109. The least abundant (0.368 atom percent) isotope of naturally occurring nitrogen. + 0 + N + 14.007 + 14.00307 + CAS:14390-96-6 + nitrogen-15 + chebi_ontology + (15)7N + (15)N + nitrogen, isotope of mass 15 + nitrogen-15 + CHEBI:36934 - nitrogen-15 atom + nitrogen-15 atom - CAS:14390-96-6 + CAS:14390-96-6 ChemIDplus - nitrogen-15 + nitrogen-15 IUPAC - (15)7N + (15)7N IUPAC - (15)N + (15)N IUPAC - nitrogen, isotope of mass 15 + nitrogen, isotope of mass 15 ChemIDplus - nitrogen-15 + nitrogen-15 ChEBI @@ -38560,57 +38551,57 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of nitrogen with relative atomic mass 13.0057386. The longest-lived nitrogen radionuclide with half-life of 9.965 min. - 0 - N - 14.007 - 14.00307 - CAS:13981-22-1 - nitrogen-13 - chebi_ontology - (13)7N - (13)N - nitrogen, isotope of mass 13 - nitrogen-13 - CHEBI:36935 + The radioactive isotope of nitrogen with relative atomic mass 13.0057386. The longest-lived nitrogen radionuclide with half-life of 9.965 min. + 0 + N + 14.007 + 14.00307 + CAS:13981-22-1 + nitrogen-13 + chebi_ontology + (13)7N + (13)N + nitrogen, isotope of mass 13 + nitrogen-13 + CHEBI:36935 - nitrogen-13 atom + nitrogen-13 atom - CAS:13981-22-1 + CAS:13981-22-1 ChemIDplus - nitrogen-13 + nitrogen-13 IUPAC - (13)7N + (13)7N IUPAC - (13)N + (13)N IUPAC - nitrogen, isotope of mass 13 + nitrogen, isotope of mass 13 ChemIDplus - nitrogen-13 + nitrogen-13 ChEBI @@ -38620,56 +38611,56 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - N - 14.007 - 14.00307 - CAS:13981-62-9 - nitrogen-16 - chebi_ontology - (16)7N - (16)N - nitrogen, isotope of mass 16 - nitrogen-16 - CHEBI:36936 + 0 + N + 14.007 + 14.00307 + CAS:13981-62-9 + nitrogen-16 + chebi_ontology + (16)7N + (16)N + nitrogen, isotope of mass 16 + nitrogen-16 + CHEBI:36936 - nitrogen-16 atom + nitrogen-16 atom - CAS:13981-62-9 + CAS:13981-62-9 ChemIDplus - nitrogen-16 + nitrogen-16 IUPAC - (16)7N + (16)7N IUPAC - (16)N + (16)N IUPAC - nitrogen, isotope of mass 16 + nitrogen, isotope of mass 16 ChemIDplus - nitrogen-16 + nitrogen-16 ChEBI @@ -38679,49 +38670,49 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - N - 14.007 - 14.00307 - CAS:14914-35-3 - nitrogen-17 - chebi_ontology - (17)7N - (17)N - nitrogen-17 - CHEBI:36937 + 0 + N + 14.007 + 14.00307 + CAS:14914-35-3 + nitrogen-17 + chebi_ontology + (17)7N + (17)N + nitrogen-17 + CHEBI:36937 - nitrogen-17 atom + nitrogen-17 atom - CAS:14914-35-3 + CAS:14914-35-3 ChemIDplus - nitrogen-17 + nitrogen-17 IUPAC - (17)7N + (17)7N IUPAC - (17)N + (17)N ChEBI - nitrogen-17 + nitrogen-17 ChEBI @@ -38731,43 +38722,43 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of nitrogen with relative atomic mass 14.003074. The most abundant (99.63 atom percent) isotope of naturally occurring nitrogen. - 0 - N - 14.007 - 14.00307 - nitrogen-14 - chebi_ontology - (14)7N - (14)N - nitrogen-14 - CHEBI:36938 + The stable isotope of nitrogen with relative atomic mass 14.003074. The most abundant (99.63 atom percent) isotope of naturally occurring nitrogen. + 0 + N + 14.007 + 14.00307 + nitrogen-14 + chebi_ontology + (14)7N + (14)N + nitrogen-14 + CHEBI:36938 - nitrogen-14 atom + nitrogen-14 atom - nitrogen-14 + nitrogen-14 IUPAC - (14)7N + (14)7N IUPAC - (14)N + (14)N IUPAC - nitrogen-14 + nitrogen-14 ChEBI @@ -38777,62 +38768,62 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of fluorine with relative atomic mass 18.000938. The longest-lived fluorine radionuclide with half-life of 109.77 min. - 0 - [18F] - InChI=1S/F/i1-1 - YCKRFDGAMUMZLT-BJUDXGSMSA-N - 18.001 - 18.00094 - [18F] - CAS:13981-56-1 - DrugBank:DB13134 - Wikipedia:Fluorine-18 - fluorine-18 - chebi_ontology - (18)9F - (18)F - fluorine, isotope of mass 18 - fluorine-18 - CHEBI:36939 + The radioactive isotope of fluorine with relative atomic mass 18.000938. The longest-lived fluorine radionuclide with half-life of 109.77 min. + 0 + [18F] + InChI=1S/F/i1-1 + YCKRFDGAMUMZLT-BJUDXGSMSA-N + 18.001 + 18.00094 + [18F] + CAS:13981-56-1 + DrugBank:DB13134 + Wikipedia:Fluorine-18 + fluorine-18 + chebi_ontology + (18)9F + (18)F + fluorine, isotope of mass 18 + fluorine-18 + CHEBI:36939 - fluorine-18 atom + fluorine-18 atom - CAS:13981-56-1 + CAS:13981-56-1 ChemIDplus - fluorine-18 + fluorine-18 IUPAC - (18)9F + (18)9F IUPAC - (18)F + (18)F IUPAC - fluorine, isotope of mass 18 + fluorine, isotope of mass 18 ChemIDplus - fluorine-18 + fluorine-18 ChEBI @@ -38842,46 +38833,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of fluorine with relative atomic mass 18.998403 and nuclear spin (1)/2. - 0 - [19F] - InChI=1S/F/i1+0 - YCKRFDGAMUMZLT-IGMARMGPSA-N - 18.998 - 18.99840 - [19F] - fluorine-19 - chebi_ontology - (19)9F - (19)F - fluorine-19 - CHEBI:36940 + The stable isotope of fluorine with relative atomic mass 18.998403 and nuclear spin (1)/2. + 0 + [19F] + InChI=1S/F/i1+0 + YCKRFDGAMUMZLT-IGMARMGPSA-N + 18.998 + 18.99840 + [19F] + fluorine-19 + chebi_ontology + (19)9F + (19)F + fluorine-19 + CHEBI:36940 - fluorine-19 atom + fluorine-19 atom - fluorine-19 + fluorine-19 IUPAC - (19)9F + (19)9F IUPAC - (19)F + (19)F ChEBI - fluorine-19 + fluorine-19 ChEBI @@ -38988,46 +38979,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of helium with relative atomic mass 6.01889 and half-life of 806.7 ms. - 0 - [6He] - InChI=1S/He/i1+2 - SWQJXJOGLNCZEY-NJFSPNSNSA-N - 6.019 - 6.01889 - [6He] - helium-6 - chebi_ontology - (6)2He - (6)He - helium-6 - CHEBI:37003 + The radioactive isotope of helium with relative atomic mass 6.01889 and half-life of 806.7 ms. + 0 + [6He] + InChI=1S/He/i1+2 + SWQJXJOGLNCZEY-NJFSPNSNSA-N + 6.019 + 6.01889 + [6He] + helium-6 + chebi_ontology + (6)2He + (6)He + helium-6 + CHEBI:37003 - helium-6 atom + helium-6 atom - helium-6 + helium-6 IUPAC - (6)2He + (6)2He IUPAC - (6)He + (6)He IUPAC - helium-6 + helium-6 ChEBI @@ -39037,46 +39028,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of helium with relative atomic mass 8.03392 and half-life of 119.0 ms. - 0 - [8He] - InChI=1S/He/i1+4 - SWQJXJOGLNCZEY-RNFDNDRNSA-N - 8.034 - 8.03392 - [8He] - helium-8 - chebi_ontology - (8)2He - (8)He - helium-8 - CHEBI:37004 + The radioactive isotope of helium with relative atomic mass 8.03392 and half-life of 119.0 ms. + 0 + [8He] + InChI=1S/He/i1+4 + SWQJXJOGLNCZEY-RNFDNDRNSA-N + 8.034 + 8.03392 + [8He] + helium-8 + chebi_ontology + (8)2He + (8)He + helium-8 + CHEBI:37004 - helium-8 atom + helium-8 atom - helium-8 + helium-8 IUPAC - (8)2He + (8)2He IUPAC - (8)He + (8)He IUPAC - helium-8 + helium-8 ChEBI @@ -39272,67 +39263,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 209.98286 and half-life of 138.376 days; the only naturally occurring isotope of polonium. - 0 - [210Po] - InChI=1S/Po/i1+1 - HZEBHPIOVYHPMT-OUBTZVSYSA-N - 209.983 - 209.98286 - [210Po] - CAS:13981-52-7 - Gmelin:76756 - polonium-210 - chebi_ontology - (210)84Po - (210)Po - polonium, isotope of mass 210 - polonium-210 - CHEBI:37340 + The radioactive isotope of polonium with relative atomic mass 209.98286 and half-life of 138.376 days; the only naturally occurring isotope of polonium. + 0 + [210Po] + InChI=1S/Po/i1+1 + HZEBHPIOVYHPMT-OUBTZVSYSA-N + 209.983 + 209.98286 + [210Po] + CAS:13981-52-7 + Gmelin:76756 + polonium-210 + chebi_ontology + (210)84Po + (210)Po + polonium, isotope of mass 210 + polonium-210 + CHEBI:37340 - polonium-210 atom + polonium-210 atom - CAS:13981-52-7 + CAS:13981-52-7 ChemIDplus - Gmelin:76756 + Gmelin:76756 Gmelin - polonium-210 + polonium-210 IUPAC - (210)84Po + (210)84Po IUPAC - (210)Po + (210)Po IUPAC - polonium, isotope of mass 210 + polonium, isotope of mass 210 ChemIDplus - polonium-210 + polonium-210 ChEBI @@ -39342,67 +39333,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 210.986637 and half-life of 0.516 s. - 0 - [211Po] - InChI=1S/Po/i1+2 - HZEBHPIOVYHPMT-NJFSPNSNSA-N - 210.987 - 210.98664 - [211Po] - CAS:15735-83-8 - Gmelin:41683 - polonium-211 - chebi_ontology - (211)84Po - (211)Po - polonium, isotope of mass 211 - polonium-211 - CHEBI:37341 + The radioactive isotope of polonium with relative atomic mass 210.986637 and half-life of 0.516 s. + 0 + [211Po] + InChI=1S/Po/i1+2 + HZEBHPIOVYHPMT-NJFSPNSNSA-N + 210.987 + 210.98664 + [211Po] + CAS:15735-83-8 + Gmelin:41683 + polonium-211 + chebi_ontology + (211)84Po + (211)Po + polonium, isotope of mass 211 + polonium-211 + CHEBI:37341 - polonium-211 atom + polonium-211 atom - CAS:15735-83-8 + CAS:15735-83-8 ChemIDplus - Gmelin:41683 + Gmelin:41683 Gmelin - polonium-211 + polonium-211 IUPAC - (211)84Po + (211)84Po IUPAC - (211)Po + (211)Po IUPAC - polonium, isotope of mass 211 + polonium, isotope of mass 211 ChemIDplus - polonium-211 + polonium-211 ChEBI @@ -39412,67 +39403,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 211.988852 and half-life of 0.299 mus. - 0 - [212Po] - InChI=1S/Po/i1+3 - HZEBHPIOVYHPMT-AKLPVKDBSA-N - 211.989 - 211.98885 - [212Po] - CAS:15389-34-1 - Gmelin:41677 - polonium-212 - chebi_ontology - (212)84Po - (212)Po - polonium, isotope of mass 212 - polonium-212 - CHEBI:37342 + The radioactive isotope of polonium with relative atomic mass 211.988852 and half-life of 0.299 mus. + 0 + [212Po] + InChI=1S/Po/i1+3 + HZEBHPIOVYHPMT-AKLPVKDBSA-N + 211.989 + 211.98885 + [212Po] + CAS:15389-34-1 + Gmelin:41677 + polonium-212 + chebi_ontology + (212)84Po + (212)Po + polonium, isotope of mass 212 + polonium-212 + CHEBI:37342 - polonium-212 atom + polonium-212 atom - CAS:15389-34-1 + CAS:15389-34-1 ChemIDplus - Gmelin:41677 + Gmelin:41677 Gmelin - polonium-212 + polonium-212 IUPAC - (212)84Po + (212)84Po IUPAC - (212)Po + (212)Po IUPAC - polonium, isotope of mass 212 + polonium, isotope of mass 212 ChemIDplus - polonium-212 + polonium-212 ChEBI @@ -39482,60 +39473,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 212.9928425 and half-life of 4.2 mus. - 0 - [213Po] - InChI=1S/Po/i1+4 - HZEBHPIOVYHPMT-RNFDNDRNSA-N - 212.993 - 212.99284 - [213Po] - CAS:15756-57-7 - polonium-213 - chebi_ontology - (213)84Po - (213)Po - polonium, isotope of mass 213 - polonium-213 - CHEBI:37343 + The radioactive isotope of polonium with relative atomic mass 212.9928425 and half-life of 4.2 mus. + 0 + [213Po] + InChI=1S/Po/i1+4 + HZEBHPIOVYHPMT-RNFDNDRNSA-N + 212.993 + 212.99284 + [213Po] + CAS:15756-57-7 + polonium-213 + chebi_ontology + (213)84Po + (213)Po + polonium, isotope of mass 213 + polonium-213 + CHEBI:37343 - polonium-213 atom + polonium-213 atom - CAS:15756-57-7 + CAS:15756-57-7 ChemIDplus - polonium-213 + polonium-213 IUPAC - (213)84Po + (213)84Po IUPAC - (213)Po + (213)Po IUPAC - polonium, isotope of mass 213 + polonium, isotope of mass 213 ChemIDplus - polonium-213 + polonium-213 ChEBI @@ -39545,67 +39536,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 213.995186 and half-life of 164.3 mus. - 0 - [214Po] - InChI=1S/Po/i1+5 - HZEBHPIOVYHPMT-BKFZFHPZSA-N - 213.995 - 213.99519 - [214Po] - CAS:15735-67-8 - Gmelin:41679 - polonium-214 - chebi_ontology - (214)84Po - (214)Po - polonium, isotope of mass 214 - polonium-214 - CHEBI:37344 + The radioactive isotope of polonium with relative atomic mass 213.995186 and half-life of 164.3 mus. + 0 + [214Po] + InChI=1S/Po/i1+5 + HZEBHPIOVYHPMT-BKFZFHPZSA-N + 213.995 + 213.99519 + [214Po] + CAS:15735-67-8 + Gmelin:41679 + polonium-214 + chebi_ontology + (214)84Po + (214)Po + polonium, isotope of mass 214 + polonium-214 + CHEBI:37344 - polonium-214 atom + polonium-214 atom - CAS:15735-67-8 + CAS:15735-67-8 ChemIDplus - Gmelin:41679 + Gmelin:41679 Gmelin - polonium-214 + polonium-214 IUPAC - (214)84Po + (214)84Po IUPAC - (214)Po + (214)Po IUPAC - polonium, isotope of mass 214 + polonium, isotope of mass 214 ChemIDplus - polonium-214 + polonium-214 ChEBI @@ -39615,67 +39606,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 214.999415 and half-life of 1.781 ms. - 0 - [215Po] - InChI=1S/Po/i1+6 - HZEBHPIOVYHPMT-LZFNBGRKSA-N - 214.999 - 214.99941 - [215Po] - CAS:15706-52-2 - Gmelin:41680 - polonium-215 - chebi_ontology - (215)84Po - (215)Po - polonium, isotope of mass 215 - polonium-215 - CHEBI:37345 + The radioactive isotope of polonium with relative atomic mass 214.999415 and half-life of 1.781 ms. + 0 + [215Po] + InChI=1S/Po/i1+6 + HZEBHPIOVYHPMT-LZFNBGRKSA-N + 214.999 + 214.99941 + [215Po] + CAS:15706-52-2 + Gmelin:41680 + polonium-215 + chebi_ontology + (215)84Po + (215)Po + polonium, isotope of mass 215 + polonium-215 + CHEBI:37345 - polonium-215 atom + polonium-215 atom - CAS:15706-52-2 + CAS:15706-52-2 ChemIDplus - Gmelin:41680 + Gmelin:41680 Gmelin - polonium-215 + polonium-215 IUPAC - (215)84Po + (215)84Po IUPAC - (215)Po + (215)Po IUPAC - polonium, isotope of mass 215 + polonium, isotope of mass 215 ChemIDplus - polonium-215 + polonium-215 ChEBI @@ -39685,67 +39676,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 216.001905 and half-life of 0.145 s. - 0 - [216Po] - InChI=1S/Po/i1+7 - HZEBHPIOVYHPMT-RKEGKUSMSA-N - 216.002 - 216.00191 - [216Po] - CAS:15756-58-8 - Gmelin:41684 - polonium-216 - chebi_ontology - (216)84Po - (216)Po - polonium, isotope of mass 216 - polonium-216 - CHEBI:37346 + The radioactive isotope of polonium with relative atomic mass 216.001905 and half-life of 0.145 s. + 0 + [216Po] + InChI=1S/Po/i1+7 + HZEBHPIOVYHPMT-RKEGKUSMSA-N + 216.002 + 216.00191 + [216Po] + CAS:15756-58-8 + Gmelin:41684 + polonium-216 + chebi_ontology + (216)84Po + (216)Po + polonium, isotope of mass 216 + polonium-216 + CHEBI:37346 - polonium-216 atom + polonium-216 atom - CAS:15756-58-8 + CAS:15756-58-8 ChemIDplus - Gmelin:41684 + Gmelin:41684 Gmelin - polonium-216 + polonium-216 IUPAC - (216)84Po + (216)84Po IUPAC - (216)Po + (216)Po IUPAC - polonium, isotope of mass 216 + polonium, isotope of mass 216 ChemIDplus - polonium-216 + polonium-216 ChEBI @@ -39755,46 +39746,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 217.006253 and half-life of < 10 s. - 0 - [217Po] - InChI=1S/Po/i1+8 - HZEBHPIOVYHPMT-CONNIKPHSA-N - 217.006 - 217.00625 - [217Po] - polonium-217 - chebi_ontology - (217)84Po - (217)Po - polonium-217 - CHEBI:37347 + The radioactive isotope of polonium with relative atomic mass 217.006253 and half-life of < 10 s. + 0 + [217Po] + InChI=1S/Po/i1+8 + HZEBHPIOVYHPMT-CONNIKPHSA-N + 217.006 + 217.00625 + [217Po] + polonium-217 + chebi_ontology + (217)84Po + (217)Po + polonium-217 + CHEBI:37347 - polonium-217 atom + polonium-217 atom - polonium-217 + polonium-217 IUPAC - (217)84Po + (217)84Po IUPAC - (217)Po + (217)Po IUPAC - polonium-217 + polonium-217 ChEBI @@ -39804,67 +39795,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 218.008966 and half-life of 3.10 min. - 0 - [218Po] - InChI=1S/Po/i1+9 - HZEBHPIOVYHPMT-KUYOKYOWSA-N - 218.009 - 218.00897 - [218Po] - CAS:15422-74-9 - Gmelin:41685 - polonium-218 - chebi_ontology - (218)84Po - (218)Po - polonium, isotope of mass 218 - polonium-218 - CHEBI:37348 + The radioactive isotope of polonium with relative atomic mass 218.008966 and half-life of 3.10 min. + 0 + [218Po] + InChI=1S/Po/i1+9 + HZEBHPIOVYHPMT-KUYOKYOWSA-N + 218.009 + 218.00897 + [218Po] + CAS:15422-74-9 + Gmelin:41685 + polonium-218 + chebi_ontology + (218)84Po + (218)Po + polonium, isotope of mass 218 + polonium-218 + CHEBI:37348 - polonium-218 atom + polonium-218 atom - CAS:15422-74-9 + CAS:15422-74-9 ChemIDplus - Gmelin:41685 + Gmelin:41685 Gmelin - polonium-218 + polonium-218 IUPAC - (218)84Po + (218)84Po IUPAC - (218)Po + (218)Po IUPAC - polonium, isotope of mass 218 + polonium, isotope of mass 218 ChemIDplus - polonium-218 + polonium-218 ChEBI @@ -39874,45 +39865,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [190Po] - InChI=1S/Po/i1-19 - HZEBHPIOVYHPMT-BTCYYSDASA-N - 189.994 - 189.99429 - [190Po] - polonium-190 - chebi_ontology - (190)84Po - (190)Po - polonium-190 - CHEBI:37350 + 0 + [190Po] + InChI=1S/Po/i1-19 + HZEBHPIOVYHPMT-BTCYYSDASA-N + 189.994 + 189.99429 + [190Po] + polonium-190 + chebi_ontology + (190)84Po + (190)Po + polonium-190 + CHEBI:37350 - polonium-190 atom + polonium-190 atom - polonium-190 + polonium-190 IUPAC - (190)84Po + (190)84Po IUPAC - (190)Po + (190)Po IUPAC - polonium-190 + polonium-190 ChEBI @@ -39922,45 +39913,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [191Po] - InChI=1S/Po/i1-18 - HZEBHPIOVYHPMT-ZWLOOBQPSA-N - 190.995 - 190.99465 - [191Po] - polonium-191 - chebi_ontology - (191)84Po - (191)Po - polonium-191 - CHEBI:37351 + 0 + [191Po] + InChI=1S/Po/i1-18 + HZEBHPIOVYHPMT-ZWLOOBQPSA-N + 190.995 + 190.99465 + [191Po] + polonium-191 + chebi_ontology + (191)84Po + (191)Po + polonium-191 + CHEBI:37351 - polonium-191 atom + polonium-191 atom - polonium-191 + polonium-191 IUPAC - (191)84Po + (191)84Po IUPAC - (191)Po + (191)Po IUPAC - polonium-191 + polonium-191 ChEBI @@ -39970,45 +39961,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [192Po] - InChI=1S/Po/i1-17 - HZEBHPIOVYHPMT-MEAORNGASA-N - 191.990 - 191.99033 - [192Po] - polonium-192 - chebi_ontology - (192)84Po - (192)Po - polonium-192 - CHEBI:37352 + 0 + [192Po] + InChI=1S/Po/i1-17 + HZEBHPIOVYHPMT-MEAORNGASA-N + 191.990 + 191.99033 + [192Po] + polonium-192 + chebi_ontology + (192)84Po + (192)Po + polonium-192 + CHEBI:37352 - polonium-192 atom + polonium-192 atom - polonium-192 + polonium-192 IUPAC - (192)84Po + (192)84Po IUPAC - (192)Po + (192)Po IUPAC - polonium-192 + polonium-192 ChEBI @@ -40018,45 +40009,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [193Po] - InChI=1S/Po/i1-16 - HZEBHPIOVYHPMT-KLOSUXQXSA-N - 192.991 - 192.99110 - [193Po] - polonium-193 - chebi_ontology - (193)84Po - (193)Po - polonium-193 - CHEBI:37353 + 0 + [193Po] + InChI=1S/Po/i1-16 + HZEBHPIOVYHPMT-KLOSUXQXSA-N + 192.991 + 192.99110 + [193Po] + polonium-193 + chebi_ontology + (193)84Po + (193)Po + polonium-193 + CHEBI:37353 - polonium-193 atom + polonium-193 atom - polonium-193 + polonium-193 IUPAC - (193)84Po + (193)84Po IUPAC - (193)Po + (193)Po IUPAC - polonium-193 + polonium-193 ChEBI @@ -40066,45 +40057,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [194Po] - InChI=1S/Po/i1-15 - HZEBHPIOVYHPMT-LPJXZZDMSA-N - 193.988 - 193.98828 - [194Po] - polonium-194 - chebi_ontology - (194)84Po - (194)Po - polonium-194 - CHEBI:37354 + 0 + [194Po] + InChI=1S/Po/i1-15 + HZEBHPIOVYHPMT-LPJXZZDMSA-N + 193.988 + 193.98828 + [194Po] + polonium-194 + chebi_ontology + (194)84Po + (194)Po + polonium-194 + CHEBI:37354 - polonium-194 atom + polonium-194 atom - polonium-194 + polonium-194 IUPAC - (194)84Po + (194)84Po IUPAC - (194)Po + (194)Po IUPAC - polonium-194 + polonium-194 ChEBI @@ -40114,45 +40105,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [195Po] - InChI=1S/Po/i1-14 - HZEBHPIOVYHPMT-DWTUDRKQSA-N - 194.988 - 194.98804 - [195Po] - polonium-195 - chebi_ontology - (195)84Po - (195)Po - polonium-195 - CHEBI:37355 + 0 + [195Po] + InChI=1S/Po/i1-14 + HZEBHPIOVYHPMT-DWTUDRKQSA-N + 194.988 + 194.98804 + [195Po] + polonium-195 + chebi_ontology + (195)84Po + (195)Po + polonium-195 + CHEBI:37355 - polonium-195 atom + polonium-195 atom - polonium-195 + polonium-195 IUPAC - (195)84Po + (195)84Po IUPAC - (195)Po + (195)Po IUPAC - polonium-195 + polonium-195 ChEBI @@ -40162,45 +40153,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [196Po] - InChI=1S/Po/i1-13 - HZEBHPIOVYHPMT-QAPNMCNYSA-N - 195.985 - 195.98547 - [196Po] - polonium-196 - chebi_ontology - (196)84Po - (196)Po - polonium-196 - CHEBI:37356 + 0 + [196Po] + InChI=1S/Po/i1-13 + HZEBHPIOVYHPMT-QAPNMCNYSA-N + 195.985 + 195.98547 + [196Po] + polonium-196 + chebi_ontology + (196)84Po + (196)Po + polonium-196 + CHEBI:37356 - polonium-196 atom + polonium-196 atom - polonium-196 + polonium-196 IUPAC - (196)84Po + (196)84Po IUPAC - (196)Po + (196)Po IUPAC - polonium-196 + polonium-196 ChEBI @@ -40210,45 +40201,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [197Po] - InChI=1S/Po/i1-12 - HZEBHPIOVYHPMT-DFNMHJECSA-N - 196.986 - 196.98557 - [197Po] - polonium-197 - chebi_ontology - (197)84Po - (197)Po - polonium-197 - CHEBI:37357 + 0 + [197Po] + InChI=1S/Po/i1-12 + HZEBHPIOVYHPMT-DFNMHJECSA-N + 196.986 + 196.98557 + [197Po] + polonium-197 + chebi_ontology + (197)84Po + (197)Po + polonium-197 + CHEBI:37357 - polonium-197 atom + polonium-197 atom - polonium-197 + polonium-197 IUPAC - (197)84Po + (197)84Po ChEBI - (197)Po + (197)Po ChEBI - polonium-197 + polonium-197 ChEBI @@ -40258,45 +40249,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [198Po] - InChI=1S/Po/i1-11 - HZEBHPIOVYHPMT-DSSHQIQSSA-N - 197.984 - 197.98402 - [198Po] - polonium-198 - chebi_ontology - (198)84Po - (198)Po - polonium-198 - CHEBI:37358 + 0 + [198Po] + InChI=1S/Po/i1-11 + HZEBHPIOVYHPMT-DSSHQIQSSA-N + 197.984 + 197.98402 + [198Po] + polonium-198 + chebi_ontology + (198)84Po + (198)Po + polonium-198 + CHEBI:37358 - polonium-198 atom + polonium-198 atom - polonium-198 + polonium-198 IUPAC - (198)84Po + (198)84Po IUPAC - (198)Po + (198)Po IUPAC - polonium-198 + polonium-198 ChEBI @@ -40306,45 +40297,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [199Po] - InChI=1S/Po/i1-10 - HZEBHPIOVYHPMT-CBESVEIWSA-N - 198.985 - 198.98504 - [199Po] - polonium-199 - chebi_ontology - (199)84Po - (199)Po - polonium-199 - CHEBI:37359 + 0 + [199Po] + InChI=1S/Po/i1-10 + HZEBHPIOVYHPMT-CBESVEIWSA-N + 198.985 + 198.98504 + [199Po] + polonium-199 + chebi_ontology + (199)84Po + (199)Po + polonium-199 + CHEBI:37359 - polonium-199 atom + polonium-199 atom - polonium-199 + polonium-199 IUPAC - (199)84Po + (199)84Po IUPAC - (199)Po + (199)Po IUPAC - polonium-199 + polonium-199 ChEBI @@ -40354,45 +40345,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [200Po] - InChI=1S/Po/i1-9 - HZEBHPIOVYHPMT-DBXDQKISSA-N - 199.982 - 199.98173 - [200Po] - polonium-200 - chebi_ontology - (200)84Po - (200)Po - polonium-200 - CHEBI:37360 + 0 + [200Po] + InChI=1S/Po/i1-9 + HZEBHPIOVYHPMT-DBXDQKISSA-N + 199.982 + 199.98173 + [200Po] + polonium-200 + chebi_ontology + (200)84Po + (200)Po + polonium-200 + CHEBI:37360 - polonium-200 atom + polonium-200 atom - polonium-200 + polonium-200 IUPAC - (200)84Po + (200)84Po IUPAC - (200)Po + (200)Po IUPAC - polonium-200 + polonium-200 ChEBI @@ -40402,45 +40393,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [201Po] - InChI=1S/Po/i1-8 - HZEBHPIOVYHPMT-QQVBLGSISA-N - 200.982 - 200.98221 - [201Po] - polonium-201 - chebi_ontology - (201)84Po - (201)Po - polonium-201 - CHEBI:37361 + 0 + [201Po] + InChI=1S/Po/i1-8 + HZEBHPIOVYHPMT-QQVBLGSISA-N + 200.982 + 200.98221 + [201Po] + polonium-201 + chebi_ontology + (201)84Po + (201)Po + polonium-201 + CHEBI:37361 - polonium-201 atom + polonium-201 atom - polonium-201 + polonium-201 IUPAC - (201)84Po + (201)84Po IUPAC - (201)Po + (201)Po IUPAC - polonium-201 + polonium-201 ChEBI @@ -40450,45 +40441,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [202Po] - InChI=1S/Po/i1-7 - HZEBHPIOVYHPMT-NOHWODKXSA-N - 201.981 - 201.98070 - [202Po] - polonium-202 - chebi_ontology - (202)84Po - (202)Po - polonium-202 - CHEBI:37362 + 0 + [202Po] + InChI=1S/Po/i1-7 + HZEBHPIOVYHPMT-NOHWODKXSA-N + 201.981 + 201.98070 + [202Po] + polonium-202 + chebi_ontology + (202)84Po + (202)Po + polonium-202 + CHEBI:37362 - polonium-202 atom + polonium-202 atom - polonium-202 + polonium-202 IUPAC - (202)84Po + (202)84Po IUPAC - (202)Po + (202)Po IUPAC - polonium-202 + polonium-202 ChEBI @@ -40498,60 +40489,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 202.981413 and half-life of 36.7 min. - 0 - [203Po] - InChI=1S/Po/i1-6 - HZEBHPIOVYHPMT-VENIDDJXSA-N - 202.981 - 202.98141 - [203Po] - CAS:16729-74-1 - polonium-203 - chebi_ontology - (203)84Po - (203)Po - polonium, isotope of mass 203 - polonium-203 - CHEBI:37363 + The radioactive isotope of polonium with relative atomic mass 202.981413 and half-life of 36.7 min. + 0 + [203Po] + InChI=1S/Po/i1-6 + HZEBHPIOVYHPMT-VENIDDJXSA-N + 202.981 + 202.98141 + [203Po] + CAS:16729-74-1 + polonium-203 + chebi_ontology + (203)84Po + (203)Po + polonium, isotope of mass 203 + polonium-203 + CHEBI:37363 - polonium-203 atom + polonium-203 atom - CAS:16729-74-1 + CAS:16729-74-1 ChemIDplus - polonium-203 + polonium-203 IUPAC - (203)84Po + (203)84Po IUPAC - (203)Po + (203)Po IUPAC - polonium, isotope of mass 203 + polonium, isotope of mass 203 ChemIDplus - polonium-203 + polonium-203 ChEBI @@ -40561,45 +40552,45 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - [204Po] - InChI=1S/Po/i1-5 - HZEBHPIOVYHPMT-FTXFMUIASA-N - 203.980 - 203.98031 - [204Po] - polonium-204 - chebi_ontology - (204)84Po - (204)Po - polonium-204 - CHEBI:37364 + 0 + [204Po] + InChI=1S/Po/i1-5 + HZEBHPIOVYHPMT-FTXFMUIASA-N + 203.980 + 203.98031 + [204Po] + polonium-204 + chebi_ontology + (204)84Po + (204)Po + polonium-204 + CHEBI:37364 - polonium-204 atom + polonium-204 atom - polonium-204 + polonium-204 IUPAC - (204)84Po + (204)84Po IUPAC - (204)Po + (204)Po IUPAC - polonium-204 + polonium-204 ChEBI @@ -40609,60 +40600,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 204.981165 and half-life of 1.66 h. - 0 - [205Po] - InChI=1S/Po/i1-4 - HZEBHPIOVYHPMT-AHCXROLUSA-N - 204.981 - 204.98117 - [205Po] - CAS:16729-76-3 - polonium-205 - chebi_ontology - (205)84Po - (205)Po - polonium, isotope of mass 205 - polonium-205 - CHEBI:37365 + The radioactive isotope of polonium with relative atomic mass 204.981165 and half-life of 1.66 h. + 0 + [205Po] + InChI=1S/Po/i1-4 + HZEBHPIOVYHPMT-AHCXROLUSA-N + 204.981 + 204.98117 + [205Po] + CAS:16729-76-3 + polonium-205 + chebi_ontology + (205)84Po + (205)Po + polonium, isotope of mass 205 + polonium-205 + CHEBI:37365 - polonium-205 atom + polonium-205 atom - CAS:16729-76-3 + CAS:16729-76-3 ChemIDplus - polonium-205 + polonium-205 IUPAC - (205)84Po + (205)84Po IUPAC - (205)Po + (205)Po IUPAC - polonium, isotope of mass 205 + polonium, isotope of mass 205 ChemIDplus - polonium-205 + polonium-205 ChEBI @@ -40672,46 +40663,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 205.98047 and half-life of 8.8 days. - 0 - [206Po] - InChI=1S/Po/i1-3 - HZEBHPIOVYHPMT-OIOBTWANSA-N - 205.980 - 205.98047 - [206Po] - polonium-206 - chebi_ontology - (206)84Po - (206)Po - polonium-206 - CHEBI:37366 + The radioactive isotope of polonium with relative atomic mass 205.98047 and half-life of 8.8 days. + 0 + [206Po] + InChI=1S/Po/i1-3 + HZEBHPIOVYHPMT-OIOBTWANSA-N + 205.980 + 205.98047 + [206Po] + polonium-206 + chebi_ontology + (206)84Po + (206)Po + polonium-206 + CHEBI:37366 - polonium-206 atom + polonium-206 atom - polonium-206 + polonium-206 IUPAC - (206)84Po + (206)84Po IUPAC - (206)Po + (206)Po IUPAC - polonium-206 + polonium-206 ChEBI @@ -40721,60 +40712,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 206.981578 and half-life of 5.80 h. - 0 - [207Po] - InChI=1S/Po/i1-2 - HZEBHPIOVYHPMT-YPZZEJLDSA-N - 206.982 - 206.98158 - [207Po] - CAS:15720-45-3 - polonium-207 - chebi_ontology - (207)84Po - (207)Po - polonium, isotope of mass 207 - polonium-207 - CHEBI:37367 + The radioactive isotope of polonium with relative atomic mass 206.981578 and half-life of 5.80 h. + 0 + [207Po] + InChI=1S/Po/i1-2 + HZEBHPIOVYHPMT-YPZZEJLDSA-N + 206.982 + 206.98158 + [207Po] + CAS:15720-45-3 + polonium-207 + chebi_ontology + (207)84Po + (207)Po + polonium, isotope of mass 207 + polonium-207 + CHEBI:37367 - polonium-207 atom + polonium-207 atom - CAS:15720-45-3 + CAS:15720-45-3 ChemIDplus - polonium-207 + polonium-207 IUPAC - (207)84Po + (207)84Po IUPAC - (207)Po + (207)Po IUPAC - polonium, isotope of mass 207 + polonium, isotope of mass 207 ChemIDplus - polonium-207 + polonium-207 ChEBI @@ -40784,46 +40775,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 207.98123 and half-life of 2.898 years. - 0 - [208Po] - InChI=1S/Po/i1-1 - HZEBHPIOVYHPMT-BJUDXGSMSA-N - 207.981 - 207.98123 - [208Po] - polonium-208 - chebi_ontology - (208)84Po - (208)Po - polonium-208 - CHEBI:37368 + The radioactive isotope of polonium with relative atomic mass 207.98123 and half-life of 2.898 years. + 0 + [208Po] + InChI=1S/Po/i1-1 + HZEBHPIOVYHPMT-BJUDXGSMSA-N + 207.981 + 207.98123 + [208Po] + polonium-208 + chebi_ontology + (208)84Po + (208)Po + polonium-208 + CHEBI:37368 - polonium-208 atom + polonium-208 atom - polonium-208 + polonium-208 IUPAC - (208)84Po + (208)84Po IUPAC - (208)Po + (208)Po IUPAC - polonium-208 + polonium-208 ChEBI @@ -40833,46 +40824,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of polonium with relative atomic mass 208.982404 and half-life of 102 years. - 0 - [209Po] - InChI=1S/Po/i1+0 - HZEBHPIOVYHPMT-IGMARMGPSA-N - 208.982 - 208.98242 - [209Po] - polonium-209 - chebi_ontology - (209)84Po - (209)Po - polonium-209 - CHEBI:37369 + The radioactive isotope of polonium with relative atomic mass 208.982404 and half-life of 102 years. + 0 + [209Po] + InChI=1S/Po/i1+0 + HZEBHPIOVYHPMT-IGMARMGPSA-N + 208.982 + 208.98242 + [209Po] + polonium-209 + chebi_ontology + (209)84Po + (209)Po + polonium-209 + CHEBI:37369 - polonium-209 atom + polonium-209 atom - polonium-209 + polonium-209 IUPAC - (209)84Po + (209)84Po IUPAC - (209)Po + (209)Po IUPAC - polonium-209 + polonium-209 ChEBI @@ -41096,53 +41087,53 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of thallium with relative atomic mass 202.9723. The least abundant (29.524 atom percent) isotope of naturally occurring thallium. - 0 - [203Tl] - InChI=1S/Tl/i1-1 - BKVIYDNLLOSFOA-BJUDXGSMSA-N - 202.972 - 202.97234 - [203Tl] - CAS:14280-48-9 - thallium-203 - chebi_ontology - (203)81Tl - (203)Tl - thallium, isotope of mass 203 - CHEBI:37802 + The stable isotope of thallium with relative atomic mass 202.9723. The least abundant (29.524 atom percent) isotope of naturally occurring thallium. + 0 + [203Tl] + InChI=1S/Tl/i1-1 + BKVIYDNLLOSFOA-BJUDXGSMSA-N + 202.972 + 202.97234 + [203Tl] + CAS:14280-48-9 + thallium-203 + chebi_ontology + (203)81Tl + (203)Tl + thallium, isotope of mass 203 + CHEBI:37802 - thallium-203 + thallium-203 - CAS:14280-48-9 + CAS:14280-48-9 ChemIDplus - thallium-203 + thallium-203 IUPAC - (203)81Tl + (203)81Tl IUPAC - (203)Tl + (203)Tl IUPAC - thallium, isotope of mass 203 + thallium, isotope of mass 203 ChemIDplus @@ -41152,60 +41143,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of thallium with relative atomic mass 204.9744. The most abundant (70.476 atom percent) isotope of naturally occurring thallium. - 0 - [205Tl] - InChI=1S/Tl/i1+1 - BKVIYDNLLOSFOA-OUBTZVSYSA-N - 204.974 - 204.97443 - [205Tl] - CAS:14280-49-0 - Gmelin:557319 - thallium-205 - chebi_ontology - (205)81Tl - (205)Tl - thallium, isotope of mass 205 - CHEBI:37803 + The stable isotope of thallium with relative atomic mass 204.9744. The most abundant (70.476 atom percent) isotope of naturally occurring thallium. + 0 + [205Tl] + InChI=1S/Tl/i1+1 + BKVIYDNLLOSFOA-OUBTZVSYSA-N + 204.974 + 204.97443 + [205Tl] + CAS:14280-49-0 + Gmelin:557319 + thallium-205 + chebi_ontology + (205)81Tl + (205)Tl + thallium, isotope of mass 205 + CHEBI:37803 - thallium-205 + thallium-205 - CAS:14280-49-0 + CAS:14280-49-0 ChemIDplus - Gmelin:557319 + Gmelin:557319 Gmelin - thallium-205 + thallium-205 IUPAC - (205)81Tl + (205)81Tl IUPAC - (205)Tl + (205)Tl IUPAC - thallium, isotope of mass 205 + thallium, isotope of mass 205 ChemIDplus @@ -41215,53 +41206,53 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of thallium with relative atomic mass 200.9708 and half-life of 72.912 hours. - 0 - [201Tl] - InChI=1S/Tl/i1-3 - BKVIYDNLLOSFOA-OIOBTWANSA-N - 200.971 - 200.97080 - [201Tl] - CAS:15064-65-0 - thallium-201 - chebi_ontology - (201)81Tl - (201)Tl - thallium, isotope of mass 201 - CHEBI:37804 + The radioactive isotope of thallium with relative atomic mass 200.9708 and half-life of 72.912 hours. + 0 + [201Tl] + InChI=1S/Tl/i1-3 + BKVIYDNLLOSFOA-OIOBTWANSA-N + 200.971 + 200.97080 + [201Tl] + CAS:15064-65-0 + thallium-201 + chebi_ontology + (201)81Tl + (201)Tl + thallium, isotope of mass 201 + CHEBI:37804 - thallium-201 + thallium-201 - CAS:15064-65-0 + CAS:15064-65-0 ChemIDplus - thallium-201 + thallium-201 IUPAC - (201)81Tl + (201)81Tl IUPAC - (201)Tl + (201)Tl IUPAC - thallium, isotope of mass 201 + thallium, isotope of mass 201 ChemIDplus @@ -41271,60 +41262,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of thallium with relative atomic mass 198.9698 and half-life of 7.42 hours. - 0 - [199Tl] - InChI=1S/Tl/i1-5 - BKVIYDNLLOSFOA-FTXFMUIASA-N - 198.970 - 198.96981 - [199Tl] - CAS:15064-66-1 - Gmelin:1491863 - thallium-199 - chebi_ontology - (199)81Tl - (199)Tl - thallium, isotope of mass 199 - CHEBI:37805 + The radioactive isotope of thallium with relative atomic mass 198.9698 and half-life of 7.42 hours. + 0 + [199Tl] + InChI=1S/Tl/i1-5 + BKVIYDNLLOSFOA-FTXFMUIASA-N + 198.970 + 198.96981 + [199Tl] + CAS:15064-66-1 + Gmelin:1491863 + thallium-199 + chebi_ontology + (199)81Tl + (199)Tl + thallium, isotope of mass 199 + CHEBI:37805 - thallium-199 + thallium-199 - CAS:15064-66-1 + CAS:15064-66-1 ChemIDplus - Gmelin:1491863 + Gmelin:1491863 Gmelin - thallium-199 + thallium-199 IUPAC - (199)81Tl + (199)81Tl IUPAC - (199)Tl + (199)Tl IUPAC - thallium, isotope of mass 199 + thallium, isotope of mass 199 ChemIDplus @@ -41504,60 +41495,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of aluminium with relative atomic mass 26.98153 and nuclear spin (5)/2. - 0 - [27Al] - InChI=1S/Al/i1+0 - XAGFODPZIPBFFR-IGMARMGPSA-N - 26.982 - 26.98154 - [27Al] - aluminium-27 - chebi_ontology - (27)13Al - (27)Al - aluminium-27 - aluminum, isotope of mass 27 - aluminum-27 - CHEBI:37968 + The stable isotope of aluminium with relative atomic mass 26.98153 and nuclear spin (5)/2. + 0 + [27Al] + InChI=1S/Al/i1+0 + XAGFODPZIPBFFR-IGMARMGPSA-N + 26.982 + 26.98154 + [27Al] + aluminium-27 + chebi_ontology + (27)13Al + (27)Al + aluminium-27 + aluminum, isotope of mass 27 + aluminum-27 + CHEBI:37968 - aluminium-27 atom + aluminium-27 atom - aluminium-27 + aluminium-27 IUPAC - (27)13Al + (27)13Al IUPAC - (27)Al + (27)Al IUPAC - aluminium-27 + aluminium-27 ChEBI - aluminum, isotope of mass 27 + aluminum, isotope of mass 27 ChEBI - aluminum-27 + aluminum-27 ChEBI @@ -41567,67 +41558,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of aluminium with relative atomic mass 25.986892 and half-life of 717,000 years. - 0 - [26Al] - InChI=1S/Al/i1-1 - XAGFODPZIPBFFR-BJUDXGSMSA-N - 25.987 - 25.98689 - [26Al] - CAS:14682-66-7 - aluminium-26 - chebi_ontology - (26)13Al - (26)Al - aluminium-26 - aluminum, isotope of mass 26 - aluminum-26 - CHEBI:37969 + The radioactive isotope of aluminium with relative atomic mass 25.986892 and half-life of 717,000 years. + 0 + [26Al] + InChI=1S/Al/i1-1 + XAGFODPZIPBFFR-BJUDXGSMSA-N + 25.987 + 25.98689 + [26Al] + CAS:14682-66-7 + aluminium-26 + chebi_ontology + (26)13Al + (26)Al + aluminium-26 + aluminum, isotope of mass 26 + aluminum-26 + CHEBI:37969 - aluminium-26 atom + aluminium-26 atom - CAS:14682-66-7 + CAS:14682-66-7 ChemIDplus - aluminium-26 + aluminium-26 IUPAC - (26)13Al + (26)13Al IUPAC - (26)Al + (26)Al IUPAC - aluminium-26 + aluminium-26 ChEBI - aluminum, isotope of mass 26 + aluminum, isotope of mass 26 ChemIDplus - aluminum-26 + aluminum-26 ChemIDplus @@ -41637,67 +41628,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of aluminium with relative atomic mass 27.981910 and half-life of 2.25 min. - 0 - [28Al] - InChI=1S/Al/i1+1 - XAGFODPZIPBFFR-OUBTZVSYSA-N - 27.982 - 27.98191 - [28Al] - CAS:14999-04-3 - aluminium-28 - chebi_ontology - (28)13Al - (28)Al - aluminium-28 - aluminum, isotope of mass 28 - aluminum-28 - CHEBI:37970 + The radioactive isotope of aluminium with relative atomic mass 27.981910 and half-life of 2.25 min. + 0 + [28Al] + InChI=1S/Al/i1+1 + XAGFODPZIPBFFR-OUBTZVSYSA-N + 27.982 + 27.98191 + [28Al] + CAS:14999-04-3 + aluminium-28 + chebi_ontology + (28)13Al + (28)Al + aluminium-28 + aluminum, isotope of mass 28 + aluminum-28 + CHEBI:37970 - aluminium-28 atom + aluminium-28 atom - CAS:14999-04-3 + CAS:14999-04-3 ChemIDplus - aluminium-28 + aluminium-28 IUPAC - (28)13Al + (28)13Al IUPAC - (28)Al + (28)Al IUPAC - aluminium-28 + aluminium-28 ChEBI - aluminum, isotope of mass 28 + aluminum, isotope of mass 28 ChemIDplus - aluminum-28 + aluminum-28 ChemIDplus @@ -41707,46 +41698,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of phosphorus with relative atomic mass 30.973762 and nuclear spin (1)/2. - 0 - [31P] - InChI=1S/P/i1+0 - OAICVXFJPJFONN-IGMARMGPSA-N - 30.974 - 30.97376 - [31P] - phosphorus-31 - chebi_ontology - (31)15P - (31)P - phosphorus-31 - CHEBI:37971 + The stable isotope of phosphorus with relative atomic mass 30.973762 and nuclear spin (1)/2. + 0 + [31P] + InChI=1S/P/i1+0 + OAICVXFJPJFONN-IGMARMGPSA-N + 30.974 + 30.97376 + [31P] + phosphorus-31 + chebi_ontology + (31)15P + (31)P + phosphorus-31 + CHEBI:37971 - phosphorus-31 atom + phosphorus-31 atom - phosphorus-31 + phosphorus-31 IUPAC - (31)15P + (31)15P IUPAC - (31)P + (31)P IUPAC - phosphorus-31 + phosphorus-31 ChEBI @@ -41756,74 +41747,74 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of phosphorus with relative atomic mass 31.973907 and half-life of 14.26 days. - 0 - [32P] - InChI=1S/P/i1+1 - OAICVXFJPJFONN-OUBTZVSYSA-N - 31.974 - 31.97391 - [32P] - CAS:14596-37-3 - KEGG:C19162 - phosphorus-32 - chebi_ontology - (32)15P - (32)P - Phosphorus, isotope of mass 32 - phosphorus, isotope of mass 32 - phosphorus-32 - CHEBI:37972 + The radioactive isotope of phosphorus with relative atomic mass 31.973907 and half-life of 14.26 days. + 0 + [32P] + InChI=1S/P/i1+1 + OAICVXFJPJFONN-OUBTZVSYSA-N + 31.974 + 31.97391 + [32P] + CAS:14596-37-3 + KEGG:C19162 + phosphorus-32 + chebi_ontology + (32)15P + (32)P + Phosphorus, isotope of mass 32 + phosphorus, isotope of mass 32 + phosphorus-32 + CHEBI:37972 - phosphorus-32 atom + phosphorus-32 atom - CAS:14596-37-3 + CAS:14596-37-3 ChemIDplus - CAS:14596-37-3 + CAS:14596-37-3 KEGG COMPOUND - phosphorus-32 + phosphorus-32 IUPAC - (32)15P + (32)15P IUPAC - (32)P + (32)P IUPAC - Phosphorus, isotope of mass 32 + Phosphorus, isotope of mass 32 KEGG_COMPOUND - phosphorus, isotope of mass 32 + phosphorus, isotope of mass 32 ChemIDplus - phosphorus-32 + phosphorus-32 ChEBI @@ -41833,60 +41824,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of phosphorus with relative atomic mass 32.971725, half-life of 25.34 days and nuclear spin (1)/2. - 0 - [33P] - InChI=1S/P/i1+2 - OAICVXFJPJFONN-NJFSPNSNSA-N - 32.972 - 32.97173 - [33P] - CAS:15749-66-3 - phosphorus-33 - chebi_ontology - (33)15P - (33)P - phosphorus, isotope of mass 33 - phosphorus-33 - CHEBI:37973 + The radioactive isotope of phosphorus with relative atomic mass 32.971725, half-life of 25.34 days and nuclear spin (1)/2. + 0 + [33P] + InChI=1S/P/i1+2 + OAICVXFJPJFONN-NJFSPNSNSA-N + 32.972 + 32.97173 + [33P] + CAS:15749-66-3 + phosphorus-33 + chebi_ontology + (33)15P + (33)P + phosphorus, isotope of mass 33 + phosphorus-33 + CHEBI:37973 - phosphorus-33 atom + phosphorus-33 atom - CAS:15749-66-3 + CAS:15749-66-3 ChemIDplus - phosphorus-33 + phosphorus-33 IUPAC - (33)15P + (33)15P IUPAC - (33)P + (33)P IUPAC - phosphorus, isotope of mass 33 + phosphorus, isotope of mass 33 ChemIDplus - phosphorus-33 + phosphorus-33 ChEBI @@ -41896,46 +41887,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of silicon with relative atomic mass 28.9764947, 4.683 atom percent natural abundancy, and nuclear spin (1)/2. - 0 - [29Si] - InChI=1S/Si/i1+1 - XUIMIQQOPSSXEZ-OUBTZVSYSA-N - 28.976 - 28.97649 - [29Si] - silicon-29 - chebi_ontology - (29)14Si - (29)Si - silicon-29 - CHEBI:37974 + The stable isotope of silicon with relative atomic mass 28.9764947, 4.683 atom percent natural abundancy, and nuclear spin (1)/2. + 0 + [29Si] + InChI=1S/Si/i1+1 + XUIMIQQOPSSXEZ-OUBTZVSYSA-N + 28.976 + 28.97649 + [29Si] + silicon-29 + chebi_ontology + (29)14Si + (29)Si + silicon-29 + CHEBI:37974 - silicon-29 atom + silicon-29 atom - silicon-29 + silicon-29 IUPAC - (29)14Si + (29)14Si IUPAC - (29)Si + (29)Si IUPAC - silicon-29 + silicon-29 ChEBI @@ -41945,46 +41936,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of silicon with relative atomic mass 27.9769265. The most abundant (92.23 atom percent) isotope of naturally occurring silicon. - 0 - [28Si] - InChI=1S/Si/i1+0 - XUIMIQQOPSSXEZ-IGMARMGPSA-N - 27.977 - 27.97693 - [28Si] - silicon-28 - chebi_ontology - (28)14Si - (28)Si - silicon-28 - CHEBI:37975 + The stable isotope of silicon with relative atomic mass 27.9769265. The most abundant (92.23 atom percent) isotope of naturally occurring silicon. + 0 + [28Si] + InChI=1S/Si/i1+0 + XUIMIQQOPSSXEZ-IGMARMGPSA-N + 27.977 + 27.97693 + [28Si] + silicon-28 + chebi_ontology + (28)14Si + (28)Si + silicon-28 + CHEBI:37975 - silicon-28 atom + silicon-28 atom - silicon-28 + silicon-28 IUPAC - (28)14Si + (28)14Si IUPAC - (28)Si + (28)Si IUPAC - silicon-28 + silicon-28 ChEBI @@ -41994,46 +41985,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of silicon with relative atomic mass 29.9737702. The least abundant (3.09 atom percent) isotope of naturally occurring silicon. - 0 - [30Si] - InChI=1S/Si/i1+2 - XUIMIQQOPSSXEZ-NJFSPNSNSA-N - 29.974 - 29.97377 - [30Si] - silicon-30 - chebi_ontology - (30)14Si - (30)Si - silicon-30 - CHEBI:37976 + The stable isotope of silicon with relative atomic mass 29.9737702. The least abundant (3.09 atom percent) isotope of naturally occurring silicon. + 0 + [30Si] + InChI=1S/Si/i1+2 + XUIMIQQOPSSXEZ-NJFSPNSNSA-N + 29.974 + 29.97377 + [30Si] + silicon-30 + chebi_ontology + (30)14Si + (30)Si + silicon-30 + CHEBI:37976 - silicon-30 atom + silicon-30 atom - silicon-30 + silicon-30 IUPAC - (30)14Si + (30)14Si IUPAC - (30)Si + (30)Si IUPAC - silicon-30 + silicon-30 ChEBI @@ -42043,60 +42034,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of silicon with relative atomic mass 30.975363, half-life of 2.62 hours and nuclear spin (3)/2. - 0 - [31Si] - InChI=1S/Si/i1+3 - XUIMIQQOPSSXEZ-AKLPVKDBSA-N - 30.975 - 30.97536 - [31Si] - CAS:14276-49-4 - silicon-31 - chebi_ontology - (31)14Si - (31)Si - silicon, isotope of mass 31 - silicon-31 - CHEBI:37977 + The radioactive isotope of silicon with relative atomic mass 30.975363, half-life of 2.62 hours and nuclear spin (3)/2. + 0 + [31Si] + InChI=1S/Si/i1+3 + XUIMIQQOPSSXEZ-AKLPVKDBSA-N + 30.975 + 30.97536 + [31Si] + CAS:14276-49-4 + silicon-31 + chebi_ontology + (31)14Si + (31)Si + silicon, isotope of mass 31 + silicon-31 + CHEBI:37977 - silicon-31 atom + silicon-31 atom - CAS:14276-49-4 + CAS:14276-49-4 ChemIDplus - silicon-31 + silicon-31 IUPAC - (31)14Si + (31)14Si IUPAC - (31)Si + (31)Si IUPAC - silicon, isotope of mass 31 + silicon, isotope of mass 31 ChemIDplus - silicon-31 + silicon-31 ChEBI @@ -42106,60 +42097,60 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of silicon with relative atomic mass 31.974148. The longest-lived silicon radionuclide with half-life of 172 years. - 0 - [32Si] - InChI=1S/Si/i1+4 - XUIMIQQOPSSXEZ-RNFDNDRNSA-N - 31.974 - 31.97415 - [32Si] - CAS:15092-72-5 - silicon-32 - chebi_ontology - (32)14Si - (32)Si - silicon, isotope of mass 32 - silicon-32 - CHEBI:37978 + The radioactive isotope of silicon with relative atomic mass 31.974148. The longest-lived silicon radionuclide with half-life of 172 years. + 0 + [32Si] + InChI=1S/Si/i1+4 + XUIMIQQOPSSXEZ-RNFDNDRNSA-N + 31.974 + 31.97415 + [32Si] + CAS:15092-72-5 + silicon-32 + chebi_ontology + (32)14Si + (32)Si + silicon, isotope of mass 32 + silicon-32 + CHEBI:37978 - silicon-32 atom + silicon-32 atom - CAS:15092-72-5 + CAS:15092-72-5 ChemIDplus - silicon-32 + silicon-32 IUPAC - (32)14Si + (32)14Si IUPAC - (32)Si + (32)Si IUPAC - silicon, isotope of mass 32 + silicon, isotope of mass 32 ChemIDplus - silicon-32 + silicon-32 ChEBI @@ -42169,67 +42160,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of sulfur with relative atomic mass 31.972071. The most abundant (95.02 atom percent) isotope of naturally occurring sulfur. - 0 - [32S] - InChI=1S/S/i1+0 - NINIDFKCEFEMDL-IGMARMGPSA-N - 31.972 - 31.97207 - [32S] - CAS:13981-57-2 - sulfur-32 - chebi_ontology - (32)16S - (32)S - sulfur, isotope of mass 32 - sulfur-32 - sulphur-32 - CHEBI:37979 + The stable isotope of sulfur with relative atomic mass 31.972071. The most abundant (95.02 atom percent) isotope of naturally occurring sulfur. + 0 + [32S] + InChI=1S/S/i1+0 + NINIDFKCEFEMDL-IGMARMGPSA-N + 31.972 + 31.97207 + [32S] + CAS:13981-57-2 + sulfur-32 + chebi_ontology + (32)16S + (32)S + sulfur, isotope of mass 32 + sulfur-32 + sulphur-32 + CHEBI:37979 - sulfur-32 atom + sulfur-32 atom - CAS:13981-57-2 + CAS:13981-57-2 ChemIDplus - sulfur-32 + sulfur-32 IUPAC - (32)16S + (32)16S IUPAC - (32)S + (32)S IUPAC - sulfur, isotope of mass 32 + sulfur, isotope of mass 32 ChemIDplus - sulfur-32 + sulfur-32 ChEBI - sulphur-32 + sulphur-32 ChEBI @@ -42239,67 +42230,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of sulfur with relative atomic mass 32.9714585, 0.75 atom percent natural abundance, and nuclear spin (3)/2. - 0 - [33S] - InChI=1S/S/i1+1 - NINIDFKCEFEMDL-OUBTZVSYSA-N - 32.971 - 32.97146 - [33S] - CAS:14257-58-0 - sulfur-33 - chebi_ontology - (33)16S - (33)S - sulfur, isotope of mass 33 - sulfur-33 - sulphur-33 - CHEBI:37980 + The stable isotope of sulfur with relative atomic mass 32.9714585, 0.75 atom percent natural abundance, and nuclear spin (3)/2. + 0 + [33S] + InChI=1S/S/i1+1 + NINIDFKCEFEMDL-OUBTZVSYSA-N + 32.971 + 32.97146 + [33S] + CAS:14257-58-0 + sulfur-33 + chebi_ontology + (33)16S + (33)S + sulfur, isotope of mass 33 + sulfur-33 + sulphur-33 + CHEBI:37980 - sulfur-33 atom + sulfur-33 atom - CAS:14257-58-0 + CAS:14257-58-0 ChemIDplus - sulfur-33 + sulfur-33 IUPAC - (33)16S + (33)16S IUPAC - (33)S + (33)S IUPAC - sulfur, isotope of mass 33 + sulfur, isotope of mass 33 ChemIDplus - sulfur-33 + sulfur-33 ChEBI - sulphur-33 + sulphur-33 ChEBI @@ -42309,67 +42300,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of sulfur with relative atomic mass 33.9678668 and 4.21 atom percent natural abundance. - 0 - [34S] - InChI=1S/S/i1+2 - NINIDFKCEFEMDL-NJFSPNSNSA-N - 33.968 - 33.96787 - [34S] - CAS:13965-97-4 - sulfur-34 - chebi_ontology - (34)16S - (34)S - sulfur, isotope of mass 34 - sulfur-34 - sulphur-34 - CHEBI:37981 + The stable isotope of sulfur with relative atomic mass 33.9678668 and 4.21 atom percent natural abundance. + 0 + [34S] + InChI=1S/S/i1+2 + NINIDFKCEFEMDL-NJFSPNSNSA-N + 33.968 + 33.96787 + [34S] + CAS:13965-97-4 + sulfur-34 + chebi_ontology + (34)16S + (34)S + sulfur, isotope of mass 34 + sulfur-34 + sulphur-34 + CHEBI:37981 - sulfur-34 atom + sulfur-34 atom - CAS:13965-97-4 + CAS:13965-97-4 ChemIDplus - sulfur-34 + sulfur-34 IUPAC - (34)16S + (34)16S IUPAC - (34)S + (34)S IUPAC - sulfur, isotope of mass 34 + sulfur, isotope of mass 34 ChemIDplus - sulfur-34 + sulfur-34 ChEBI - sulphur-34 + sulphur-34 ChEBI @@ -42379,67 +42370,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of sulfur with relative atomic mass 35.9670809. The least abundant (0.02 atom percent) isotope of naturally occurring sulfur. - 0 - [36S] - InChI=1S/S/i1+4 - NINIDFKCEFEMDL-RNFDNDRNSA-N - 35.967 - 35.96708 - [36S] - CAS:14682-80-5 - sulfur-36 - chebi_ontology - (36)16S - (36)S - sulfur, isotope of mass 36 - sulfur-36 - sulphur-36 - CHEBI:37982 + The stable isotope of sulfur with relative atomic mass 35.9670809. The least abundant (0.02 atom percent) isotope of naturally occurring sulfur. + 0 + [36S] + InChI=1S/S/i1+4 + NINIDFKCEFEMDL-RNFDNDRNSA-N + 35.967 + 35.96708 + [36S] + CAS:14682-80-5 + sulfur-36 + chebi_ontology + (36)16S + (36)S + sulfur, isotope of mass 36 + sulfur-36 + sulphur-36 + CHEBI:37982 - sulfur-36 atom + sulfur-36 atom - CAS:14682-80-5 + CAS:14682-80-5 ChemIDplus - sulfur-36 + sulfur-36 IUPAC - (36)16S + (36)16S IUPAC - (36)S + (36)S IUPAC - sulfur, isotope of mass 36 + sulfur, isotope of mass 36 ChemIDplus - sulfur-36 + sulfur-36 ChEBI - sulphur-36 + sulphur-36 ChEBI @@ -42449,67 +42440,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of sulfur with relative atomic mass 34.9690322 and nuclear spin (3)/2. The longest-lived sulfur radionuclide with half-life of 87.5 days. - 0 - [35S] - InChI=1S/S/i1+3 - NINIDFKCEFEMDL-AKLPVKDBSA-N - 34.969 - 34.96903 - [35S] - CAS:15117-53-0 - sulfur-35 - chebi_ontology - (35)16S - (35)S - sulfur, isotope of mass 35 - sulfur-35 - sulphur-35 - CHEBI:37983 + The radioactive isotope of sulfur with relative atomic mass 34.9690322 and nuclear spin (3)/2. The longest-lived sulfur radionuclide with half-life of 87.5 days. + 0 + [35S] + InChI=1S/S/i1+3 + NINIDFKCEFEMDL-AKLPVKDBSA-N + 34.969 + 34.96903 + [35S] + CAS:15117-53-0 + sulfur-35 + chebi_ontology + (35)16S + (35)S + sulfur, isotope of mass 35 + sulfur-35 + sulphur-35 + CHEBI:37983 - sulfur-35 atom + sulfur-35 atom - CAS:15117-53-0 + CAS:15117-53-0 ChemIDplus - sulfur-35 + sulfur-35 IUPAC - (35)16S + (35)16S IUPAC - (35)S + (35)S IUPAC - sulfur, isotope of mass 35 + sulfur, isotope of mass 35 ChemIDplus - sulfur-35 + sulfur-35 ChEBI - sulphur-35 + sulphur-35 ChEBI @@ -42519,67 +42510,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of sulfur with relative atomic mass 36.9711257 and half-life of 5.05 min. - 0 - [37S] - InChI=1S/S/i1+5 - NINIDFKCEFEMDL-BKFZFHPZSA-N - 36.971 - 36.97113 - [37S] - CAS:15753-06-7 - sulfur-37 - chebi_ontology - (37)16S - (37)S - sulfur, isotope of mass 37 - sulfur-37 - sulphur-37 - CHEBI:37984 + The radioactive isotope of sulfur with relative atomic mass 36.9711257 and half-life of 5.05 min. + 0 + [37S] + InChI=1S/S/i1+5 + NINIDFKCEFEMDL-BKFZFHPZSA-N + 36.971 + 36.97113 + [37S] + CAS:15753-06-7 + sulfur-37 + chebi_ontology + (37)16S + (37)S + sulfur, isotope of mass 37 + sulfur-37 + sulphur-37 + CHEBI:37984 - sulfur-37 atom + sulfur-37 atom - CAS:15753-06-7 + CAS:15753-06-7 ChemIDplus - sulfur-37 + sulfur-37 IUPAC - (37)16S + (37)16S IUPAC - (37)S + (37)S IUPAC - sulfur, isotope of mass 37 + sulfur, isotope of mass 37 ChemIDplus - sulfur-37 + sulfur-37 ChEBI - sulphur-37 + sulphur-37 ChEBI @@ -42589,67 +42580,67 @@ For example, A and B may be gene products and binding of B by A positively regul - The radioactive isotope of sulfur with relative atomic mass 37.97116 and half-life of 170.3 min. - 0 - [38S] - InChI=1S/S/i1+6 - NINIDFKCEFEMDL-LZFNBGRKSA-N - 37.971 - 37.97116 - [38S] - CAS:15759-21-4 - sulfur-38 - chebi_ontology - (38)16S - (38)S - sulfur, isotope of mass 38 - sulfur-38 - sulphur-38 - CHEBI:37985 + The radioactive isotope of sulfur with relative atomic mass 37.97116 and half-life of 170.3 min. + 0 + [38S] + InChI=1S/S/i1+6 + NINIDFKCEFEMDL-LZFNBGRKSA-N + 37.971 + 37.97116 + [38S] + CAS:15759-21-4 + sulfur-38 + chebi_ontology + (38)16S + (38)S + sulfur, isotope of mass 38 + sulfur-38 + sulphur-38 + CHEBI:37985 - sulfur-38 atom + sulfur-38 atom - CAS:15759-21-4 + CAS:15759-21-4 ChemIDplus - sulfur-38 + sulfur-38 IUPAC - (38)16S + (38)16S IUPAC - (38)S + (38)S IUPAC - sulfur, isotope of mass 38 + sulfur, isotope of mass 38 ChemIDplus - sulfur-38 + sulfur-38 ChEBI - sulphur-38 + sulphur-38 ChEBI @@ -44088,54 +44079,54 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ar - InChI=1S/Ar - XKRFYHLGVUSROY-UHFFFAOYSA-N - 39.94800 - 39.96238 - [Ar] - CHEBI:33311 - CAS:7440-37-1 - WebElements:Ar - argon - chebi_ontology - 18Ar - Ar - argon - CHEBI:49475 + 0 + Ar + InChI=1S/Ar + XKRFYHLGVUSROY-UHFFFAOYSA-N + 39.94800 + 39.96238 + [Ar] + CHEBI:33311 + CAS:7440-37-1 + WebElements:Ar + argon + chebi_ontology + 18Ar + Ar + argon + CHEBI:49475 - argon atom + argon atom - CAS:7440-37-1 + CAS:7440-37-1 ChemIDplus - argon + argon IUPAC - 18Ar + 18Ar IUPAC - Ar + Ar IUPAC - argon + argon ChEBI @@ -44145,69 +44136,69 @@ For example, A and B may be gene products and binding of B by A positively regul - A metallic element predicted as eka-aluminium by Mendeleev in 1870 and discovered by Paul-Emile Lecoq de Boisbaudran in 1875. Named in honour of France (Latin Gallia) and perhaps also from the Latin gallus cock, a translation of Lecoq. - 0 - Ga - InChI=1S/Ga - GYHNNYVSQQEPJS-UHFFFAOYSA-N - 69.72300 - 68.92557 - [Ga] - CHEBI:33326 - CHEBI:49630 - CAS:7440-55-3 - WebElements:Ga - gallium - chebi_ontology - 31Ga - Ga - galio - gallium - CHEBI:49631 + A metallic element predicted as eka-aluminium by Mendeleev in 1870 and discovered by Paul-Emile Lecoq de Boisbaudran in 1875. Named in honour of France (Latin Gallia) and perhaps also from the Latin gallus cock, a translation of Lecoq. + 0 + Ga + InChI=1S/Ga + GYHNNYVSQQEPJS-UHFFFAOYSA-N + 69.72300 + 68.92557 + [Ga] + CHEBI:33326 + CHEBI:49630 + CAS:7440-55-3 + WebElements:Ga + gallium + chebi_ontology + 31Ga + Ga + galio + gallium + CHEBI:49631 - gallium atom + gallium atom - CAS:7440-55-3 + CAS:7440-55-3 ChemIDplus - CAS:7440-55-3 + CAS:7440-55-3 NIST Chemistry WebBook - gallium + gallium IUPAC - 31Ga + 31Ga IUPAC - Ga + Ga IUPAC - galio + galio ChEBI - gallium + gallium ChEBI @@ -44298,75 +44289,75 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ho - InChI=1S/Ho - KJZYNXUDTRRSPN-UHFFFAOYSA-N - 164.93032 - 164.93033 - [Ho] - CHEBI:33378 - CHEBI:49647 - CAS:7440-60-0 - Gmelin:16291 - WebElements:Ho - holmium - chebi_ontology - 67Ho - Ho - holmio - holmium - CHEBI:49648 + 0 + Ho + InChI=1S/Ho + KJZYNXUDTRRSPN-UHFFFAOYSA-N + 164.93032 + 164.93033 + [Ho] + CHEBI:33378 + CHEBI:49647 + CAS:7440-60-0 + Gmelin:16291 + WebElements:Ho + holmium + chebi_ontology + 67Ho + Ho + holmio + holmium + CHEBI:49648 - holmium atom + holmium atom - CAS:7440-60-0 + CAS:7440-60-0 ChemIDplus - CAS:7440-60-0 + CAS:7440-60-0 NIST Chemistry WebBook - Gmelin:16291 + Gmelin:16291 Gmelin - holmium + holmium IUPAC - 67Ho + 67Ho IUPAC - Ho + Ho IUPAC - holmio + holmio ChEBI - holmium + holmium ChEBI @@ -44377,68 +44368,68 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Ir - InChI=1S/Ir - GKOZUEZYRPOHIO-UHFFFAOYSA-N - 192.21700 - 192.96292 - [Ir] - CHEBI:33360 - CHEBI:49665 - CAS:7439-88-5 - WebElements:Ir - iridium - chebi_ontology - 77Ir - Ir - iridio - iridium - CHEBI:49666 + 0 + Ir + InChI=1S/Ir + GKOZUEZYRPOHIO-UHFFFAOYSA-N + 192.21700 + 192.96292 + [Ir] + CHEBI:33360 + CHEBI:49665 + CAS:7439-88-5 + WebElements:Ir + iridium + chebi_ontology + 77Ir + Ir + iridio + iridium + CHEBI:49666 - iridium atom + iridium atom - CAS:7439-88-5 + CAS:7439-88-5 ChemIDplus - CAS:7439-88-5 + CAS:7439-88-5 NIST Chemistry WebBook - iridium + iridium IUPAC - 77Ir + 77Ir IUPAC - Ir + Ir IUPAC - iridio + iridio ChEBI - iridium + iridium ChEBI @@ -44449,74 +44440,74 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Kr - InChI=1S/Kr - DNNSSWSSYDEUBZ-UHFFFAOYSA-N - 83.80000 - 83.91150 - [Kr] - CHEBI:33312 - CAS:7439-90-9 - WebElements:Kr - krypton - chebi_ontology - 36Kr - Kr - cripton - kripton - krypton - CHEBI:49696 + 0 + Kr + InChI=1S/Kr + DNNSSWSSYDEUBZ-UHFFFAOYSA-N + 83.80000 + 83.91150 + [Kr] + CHEBI:33312 + CAS:7439-90-9 + WebElements:Kr + krypton + chebi_ontology + 36Kr + Kr + cripton + kripton + krypton + CHEBI:49696 - krypton atom + krypton atom - CAS:7439-90-9 + CAS:7439-90-9 ChemIDplus - CAS:7439-90-9 + CAS:7439-90-9 NIST Chemistry WebBook - krypton + krypton IUPAC - 36Kr + 36Kr IUPAC - Kr + Kr IUPAC - cripton + cripton ChEBI - kripton + kripton ChEBI - krypton + krypton ChEBI @@ -44527,82 +44518,82 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Pr - InChI=1S/Pr - PUDIUYLPXJFUGB-UHFFFAOYSA-N - 140.90765 - 140.90766 - [Pr] - CHEBI:33370 - CHEBI:49827 - CAS:7440-10-0 - WebElements:Pr - praseodymium - chebi_ontology - 59Pr - Pr - Praseodym - praseodimio - praseodyme - praseodymium - CHEBI:49828 + 0 + Pr + InChI=1S/Pr + PUDIUYLPXJFUGB-UHFFFAOYSA-N + 140.90765 + 140.90766 + [Pr] + CHEBI:33370 + CHEBI:49827 + CAS:7440-10-0 + WebElements:Pr + praseodymium + chebi_ontology + 59Pr + Pr + Praseodym + praseodimio + praseodyme + praseodymium + CHEBI:49828 - praseodymium atom + praseodymium atom - CAS:7440-10-0 + CAS:7440-10-0 ChemIDplus - CAS:7440-10-0 + CAS:7440-10-0 NIST Chemistry WebBook - praseodymium + praseodymium IUPAC - 59Pr + 59Pr IUPAC - Pr + Pr IUPAC - Praseodym + Praseodym ChEBI - praseodimio + praseodimio ChEBI - praseodyme + praseodyme ChEBI - praseodymium + praseodymium ChEBI @@ -44612,75 +44603,75 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Re - InChI=1S/Re - WUAPFZMCVAUBPE-UHFFFAOYSA-N - 186.20700 - 186.95575 - [Re] - CHEBI:33354 - CHEBI:49879 - CAS:7440-15-5 - WebElements:Re - rhenium - chebi_ontology - 75Re - Re - Rhenium - renio - rhenium - CHEBI:49882 + 0 + Re + InChI=1S/Re + WUAPFZMCVAUBPE-UHFFFAOYSA-N + 186.20700 + 186.95575 + [Re] + CHEBI:33354 + CHEBI:49879 + CAS:7440-15-5 + WebElements:Re + rhenium + chebi_ontology + 75Re + Re + Rhenium + renio + rhenium + CHEBI:49882 - rhenium atom + rhenium atom - CAS:7440-15-5 + CAS:7440-15-5 ChemIDplus - CAS:7440-15-5 + CAS:7440-15-5 NIST Chemistry WebBook - rhenium + rhenium IUPAC - 75Re + 75Re IUPAC - Re + Re ChEBI - Rhenium + Rhenium ChEBI - renio + renio ChEBI - rhenium + rhenium ChEBI @@ -44691,87 +44682,87 @@ For example, A and B may be gene products and binding of B by A positively regul - 0 - Xe - InChI=1S/Xe - FHNFHKCVQCLJFQ-UHFFFAOYSA-N - 131.29000 - 131.90416 - [Xe] - CHEBI:32305 - CAS:7440-63-3 - Gmelin:16318 - KEGG:C13373 - WebElements:Xe - xenon - chebi_ontology - 54Xe - Xe - Xenon - xenon - CHEBI:49957 + 0 + Xe + InChI=1S/Xe + FHNFHKCVQCLJFQ-UHFFFAOYSA-N + 131.29000 + 131.90416 + [Xe] + CHEBI:32305 + CAS:7440-63-3 + Gmelin:16318 + KEGG:C13373 + WebElements:Xe + xenon + chebi_ontology + 54Xe + Xe + Xenon + xenon + CHEBI:49957 - xenon atom + xenon atom - CAS:7440-63-3 + CAS:7440-63-3 ChemIDplus - CAS:7440-63-3 + CAS:7440-63-3 KEGG COMPOUND - CAS:7440-63-3 + CAS:7440-63-3 NIST Chemistry WebBook - Gmelin:16318 + Gmelin:16318 Gmelin - xenon + xenon IUPAC - 54Xe + 54Xe IUPAC - Xe + Xe IUPAC - Xenon + Xenon ChEBI - Xenon + Xenon KEGG_COMPOUND - xenon + xenon ChEBI @@ -44813,60 +44804,60 @@ For example, A and B may be gene products and binding of B by A positively regul - A synthetic radioactive isotope of chromium having a half-life of 27.7 days and decaying by electron capture with emission of gamma rays (0.32 MeV); it is used to label red blood cells for measurement of mass or volume, survival time, and sequestration studies, for the diagnosis of gastrointestinal bleeding, and to label platelets to study their survival. - 0 - [51Cr] - InChI=1S/Cr/i1-1 - VYZAMTAEIAYCRO-BJUDXGSMSA-N - 50.945 - 50.94477 - [51Cr] - CAS:14392-02-0 - chromium-51 - chebi_ontology - (51)24Cr - (51)Cr - 51Cr - Chromium, isotope of mass 51 - CHEBI:50076 + A synthetic radioactive isotope of chromium having a half-life of 27.7 days and decaying by electron capture with emission of gamma rays (0.32 MeV); it is used to label red blood cells for measurement of mass or volume, survival time, and sequestration studies, for the diagnosis of gastrointestinal bleeding, and to label platelets to study their survival. + 0 + [51Cr] + InChI=1S/Cr/i1-1 + VYZAMTAEIAYCRO-BJUDXGSMSA-N + 50.945 + 50.94477 + [51Cr] + CAS:14392-02-0 + chromium-51 + chebi_ontology + (51)24Cr + (51)Cr + 51Cr + Chromium, isotope of mass 51 + CHEBI:50076 - chromium-51 + chromium-51 - CAS:14392-02-0 + CAS:14392-02-0 ChemIDplus - chromium-51 + chromium-51 IUPAC - (51)24Cr + (51)24Cr IUPAC - (51)Cr + (51)Cr IUPAC - 51Cr + 51Cr ChemIDplus - Chromium, isotope of mass 51 + Chromium, isotope of mass 51 ChemIDplus @@ -45468,46 +45459,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of tin with relative atomic mass 118.903311, 8.59 atom percent natural abundance and nuclear spin (1)/2. - 0 - [119Sn] - InChI=1S/Sn/i1+0 - ATJFFYVFTNAWJD-IGMARMGPSA-N - 118.903 - 118.90331 - [119Sn] - tin-119 - chebi_ontology - (119)50Sn - (119)Sn - tin-119 - CHEBI:52230 + The stable isotope of tin with relative atomic mass 118.903311, 8.59 atom percent natural abundance and nuclear spin (1)/2. + 0 + [119Sn] + InChI=1S/Sn/i1+0 + ATJFFYVFTNAWJD-IGMARMGPSA-N + 118.903 + 118.90331 + [119Sn] + tin-119 + chebi_ontology + (119)50Sn + (119)Sn + tin-119 + CHEBI:52230 - tin-119 atom + tin-119 atom - tin-119 + tin-119 IUPAC - (119)50Sn + (119)50Sn IUPAC - (119)Sn + (119)Sn IUPAC - tin-119 + tin-119 ChEBI @@ -45517,46 +45508,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of tin with relative atomic mass 119.902199 and 32.58 atom percent natural abundance. - 0 - [120Sn] - InChI=1S/Sn/i1+1 - ATJFFYVFTNAWJD-OUBTZVSYSA-N - 119.902 - 119.90220 - [120Sn] - tin-120 - chebi_ontology - (120)50Sn - (120)Sn - tin-120 - CHEBI:52231 + The stable isotope of tin with relative atomic mass 119.902199 and 32.58 atom percent natural abundance. + 0 + [120Sn] + InChI=1S/Sn/i1+1 + ATJFFYVFTNAWJD-OUBTZVSYSA-N + 119.902 + 119.90220 + [120Sn] + tin-120 + chebi_ontology + (120)50Sn + (120)Sn + tin-120 + CHEBI:52231 - tin-120 atom + tin-120 atom - tin-120 + tin-120 IUPAC - (120)50Sn + (120)50Sn IUPAC - (120)Sn + (120)Sn IUPAC - tin-120 + tin-120 ChEBI @@ -45566,46 +45557,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of tin with relative atomic mass 117.901609 and 24.22 atom percent natural abundance. - 0 - [118Sn] - InChI=1S/Sn/i1-1 - ATJFFYVFTNAWJD-BJUDXGSMSA-N - 117.902 - 117.90161 - [118Sn] - tin-118 - chebi_ontology - (118)50Sn - (118)Sn - tin-118 - CHEBI:52232 + The stable isotope of tin with relative atomic mass 117.901609 and 24.22 atom percent natural abundance. + 0 + [118Sn] + InChI=1S/Sn/i1-1 + ATJFFYVFTNAWJD-BJUDXGSMSA-N + 117.902 + 117.90161 + [118Sn] + tin-118 + chebi_ontology + (118)50Sn + (118)Sn + tin-118 + CHEBI:52232 - tin-118 atom + tin-118 atom - tin-118 + tin-118 IUPAC - (118)50Sn + (118)50Sn IUPAC - (118)Sn + (118)Sn IUPAC - tin-118 + tin-118 ChEBI @@ -45615,46 +45606,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of tin with relative atomic mass 115.901747 and 14.54 atom percent natural abundance. - 0 - [116Sn] - InChI=1S/Sn/i1-3 - ATJFFYVFTNAWJD-OIOBTWANSA-N - 115.902 - 115.90174 - [116Sn] - tin-116 - chebi_ontology - (116)50Sn - (116)Sn - tin-116 - CHEBI:52233 + The stable isotope of tin with relative atomic mass 115.901747 and 14.54 atom percent natural abundance. + 0 + [116Sn] + InChI=1S/Sn/i1-3 + ATJFFYVFTNAWJD-OIOBTWANSA-N + 115.902 + 115.90174 + [116Sn] + tin-116 + chebi_ontology + (116)50Sn + (116)Sn + tin-116 + CHEBI:52233 - tin-116 atom + tin-116 atom - tin-116 + tin-116 IUPAC - (116)50Sn + (116)50Sn IUPAC - (116)Sn + (116)Sn IUPAC - tin-116 + tin-116 ChEBI @@ -45664,46 +45655,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of tin with relative atomic mass 116.902956, 7.68 atom percent natural abundance and nuclear spin (1)/2. - 0 - [117Sn] - InChI=1S/Sn/i1-2 - ATJFFYVFTNAWJD-YPZZEJLDSA-N - 116.903 - 116.90295 - [117Sn] - tin-117 - chebi_ontology - (117)50Sn - (117)Sn - tin-117 - CHEBI:52234 + The stable isotope of tin with relative atomic mass 116.902956, 7.68 atom percent natural abundance and nuclear spin (1)/2. + 0 + [117Sn] + InChI=1S/Sn/i1-2 + ATJFFYVFTNAWJD-YPZZEJLDSA-N + 116.903 + 116.90295 + [117Sn] + tin-117 + chebi_ontology + (117)50Sn + (117)Sn + tin-117 + CHEBI:52234 - tin-117 atom + tin-117 atom - tin-117 + tin-117 IUPAC - (117)50Sn + (117)50Sn IUPAC - (117)Sn + (117)Sn IUPAC - tin-117 + tin-117 ChEBI @@ -45713,46 +45704,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of tin with relative atomic mass 114.903348, 0.34 atom percent natural abundance and nuclear spin (1)/2. - 0 - [115Sn] - InChI=1S/Sn/i1-4 - ATJFFYVFTNAWJD-AHCXROLUSA-N - 114.903 - 114.90334 - [115Sn] - tin-115 - chebi_ontology - (115)50Sn - (115)Sn - tin-115 - CHEBI:52235 + The stable isotope of tin with relative atomic mass 114.903348, 0.34 atom percent natural abundance and nuclear spin (1)/2. + 0 + [115Sn] + InChI=1S/Sn/i1-4 + ATJFFYVFTNAWJD-AHCXROLUSA-N + 114.903 + 114.90334 + [115Sn] + tin-115 + chebi_ontology + (115)50Sn + (115)Sn + tin-115 + CHEBI:52235 - tin-115 atom + tin-115 atom - tin-115 + tin-115 IUPAC - (115)50Sn + (115)50Sn IUPAC - (115)Sn + (115)Sn IUPAC - tin-115 + tin-115 ChEBI @@ -45762,39 +45753,39 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of boron with relative atomic mass 11.009306, 80.1 atom percent natural abundance and nuclear spin 3/2. - 0 - [11B] - InChI=1S/B/i1+0 - ZOXJGFHDIHLPTG-IGMARMGPSA-N - 11.009 - 11.00930 - [11B] - boron-11 - chebi_ontology - (11)5B - (11)B - CHEBI:52451 + The stable isotope of boron with relative atomic mass 11.009306, 80.1 atom percent natural abundance and nuclear spin 3/2. + 0 + [11B] + InChI=1S/B/i1+0 + ZOXJGFHDIHLPTG-IGMARMGPSA-N + 11.009 + 11.00930 + [11B] + boron-11 + chebi_ontology + (11)5B + (11)B + CHEBI:52451 - boron-11 atom + boron-11 atom - boron-11 + boron-11 IUPAC - (11)5B + (11)5B IUPAC - (11)B + (11)B IUPAC @@ -45804,46 +45795,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of tellurium with relative atomic mass 124.904425, 71.4 atom percent natural abundance and nuclear spin 1/2. - 0 - [125Te] - InChI=1S/Te/i1-3 - PORWMNRCUJJQNO-OIOBTWANSA-N - 124.904 - 124.90443 - [125Te] - tellurium-125 - chebi_ontology - (125)52Te - (125)Te - tellurium-125 - CHEBI:52452 + The stable isotope of tellurium with relative atomic mass 124.904425, 71.4 atom percent natural abundance and nuclear spin 1/2. + 0 + [125Te] + InChI=1S/Te/i1-3 + PORWMNRCUJJQNO-OIOBTWANSA-N + 124.904 + 124.90443 + [125Te] + tellurium-125 + chebi_ontology + (125)52Te + (125)Te + tellurium-125 + CHEBI:52452 - tellurium-125 atom + tellurium-125 atom - tellurium-125 + tellurium-125 IUPAC - (125)52Te + (125)52Te IUPAC - (125)Te + (125)Te IUPAC - tellurium-125 + tellurium-125 ChEBI @@ -45853,46 +45844,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of xenon with relative atomic mass 128.904780, 26.4 atom percent natural abundance and nuclear spin 1/2. - 0 - [129Xe] - InChI=1S/Xe/i1-2 - FHNFHKCVQCLJFQ-YPZZEJLDSA-N - 128.905 - 128.90478 - [129Xe] - xenon-129 - chebi_ontology - (129)54Xe - (129)Xe - xenon-129 - CHEBI:52453 + The stable isotope of xenon with relative atomic mass 128.904780, 26.4 atom percent natural abundance and nuclear spin 1/2. + 0 + [129Xe] + InChI=1S/Xe/i1-2 + FHNFHKCVQCLJFQ-YPZZEJLDSA-N + 128.905 + 128.90478 + [129Xe] + xenon-129 + chebi_ontology + (129)54Xe + (129)Xe + xenon-129 + CHEBI:52453 - xenon-129 atom + xenon-129 atom - xenon-129 + xenon-129 IUPAC - (129)54Xe + (129)54Xe IUPAC - (129)Xe + (129)Xe IUPAC - xenon-129 + xenon-129 ChEBI @@ -45902,124 +45893,124 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of selenium with relative atomic mass 76.919915, 7.60 atom percent natural abundance and nuclear spin 1/2. - 0 - [77Se] - InChI=1S/Se/i1-2 - BUGBHKTXTAQXES-YPZZEJLDSA-N - 76.920 - 76.91991 - [77Se] - Chemspider:9507361 - PMID:16158304 - PMID:23159557 - PMID:25848959 - PMID:25923042 - PMID:27129100 - PMID:30828921 - PMID:32453871 - PMID:34153173 - ((77)Se)selenium - chebi_ontology - (77)34Se - (77)Se - Se-77 - selenium, isotope of mass 77 - selenium-(77)Se - selenium-77 - CHEBI:52457 + A stable isotope of selenium with relative atomic mass 76.919915, 7.60 atom percent natural abundance and nuclear spin 1/2. + 0 + [77Se] + InChI=1S/Se/i1-2 + BUGBHKTXTAQXES-YPZZEJLDSA-N + 76.920 + 76.91991 + [77Se] + Chemspider:9507361 + PMID:16158304 + PMID:23159557 + PMID:25848959 + PMID:25923042 + PMID:27129100 + PMID:30828921 + PMID:32453871 + PMID:34153173 + ((77)Se)selenium + chebi_ontology + (77)34Se + (77)Se + Se-77 + selenium, isotope of mass 77 + selenium-(77)Se + selenium-77 + CHEBI:52457 - selenium-77 atom + selenium-77 atom - PMID:16158304 + PMID:16158304 Europe PMC - PMID:23159557 + PMID:23159557 Europe PMC - PMID:25848959 + PMID:25848959 Europe PMC - PMID:25923042 + PMID:25923042 Europe PMC - PMID:27129100 + PMID:27129100 Europe PMC - PMID:30828921 + PMID:30828921 Europe PMC - PMID:32453871 + PMID:32453871 Europe PMC - PMID:34153173 + PMID:34153173 Europe PMC - ((77)Se)selenium + ((77)Se)selenium IUPAC - (77)34Se + (77)34Se IUPAC - (77)Se + (77)Se IUPAC - Se-77 + Se-77 ChEBI - selenium, isotope of mass 77 + selenium, isotope of mass 77 ChEBI - selenium-(77)Se + selenium-(77)Se ChEBI - selenium-77 + selenium-77 ChEBI @@ -46029,46 +46020,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of lithium with relative atomic mass 7.016004, 92.5 atom percent natural abundance and nuclear spin 3/2. - 0 - [7Li] - InChI=1S/Li/i1+0 - WHXSMMKQMYFTQS-IGMARMGPSA-N - 7.016 - 7.01600 - [7Li] - lithium-7 - chebi_ontology - (7)3Li - (7)Li - lithium-7 - CHEBI:52458 + The stable isotope of lithium with relative atomic mass 7.016004, 92.5 atom percent natural abundance and nuclear spin 3/2. + 0 + [7Li] + InChI=1S/Li/i1+0 + WHXSMMKQMYFTQS-IGMARMGPSA-N + 7.016 + 7.01600 + [7Li] + lithium-7 + chebi_ontology + (7)3Li + (7)Li + lithium-7 + CHEBI:52458 - lithium-7 atom + lithium-7 atom - lithium-7 + lithium-7 IUPAC - (7)3Li + (7)3Li IUPAC - (7)Li + (7)Li IUPAC - lithium-7 + lithium-7 ChEBI @@ -46078,46 +46069,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of rubidium with relative atomic mass 86.909184, 27.9 atom percent natural abundance and nuclear spin 3/2. - 0 - [87Rb] - InChI=1S/Rb/i1+2 - IGLNJRXAVVLDKE-NJFSPNSNSA-N - 86.909 - 86.90918 - [87Rb] - rubidium-87 - chebi_ontology - (87)37Rb - (87)Rb - rubidium-87 - CHEBI:52459 + The stable isotope of rubidium with relative atomic mass 86.909184, 27.9 atom percent natural abundance and nuclear spin 3/2. + 0 + [87Rb] + InChI=1S/Rb/i1+2 + IGLNJRXAVVLDKE-NJFSPNSNSA-N + 86.909 + 86.90918 + [87Rb] + rubidium-87 + chebi_ontology + (87)37Rb + (87)Rb + rubidium-87 + CHEBI:52459 - rubidium-87 atom + rubidium-87 atom - rubidium-87 + rubidium-87 IUPAC - (87)37Rb + (87)37Rb IUPAC - (87)Rb + (87)Rb IUPAC - rubidium-87 + rubidium-87 ChEBI @@ -46127,46 +46118,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of niobium with relative atomic mass 92.906378, 100 atom percent natural abundance and nuclear spin 9/2. - 0 - [93Nb] - InChI=1S/Nb/i1+0 - GUCVJGMIXFAOAE-IGMARMGPSA-N - 92.906 - 92.90637 - [93Nb] - niobium-93 - chebi_ontology - (93)41Nb - (93)Nb - niobium-93 - CHEBI:52460 + The stable isotope of niobium with relative atomic mass 92.906378, 100 atom percent natural abundance and nuclear spin 9/2. + 0 + [93Nb] + InChI=1S/Nb/i1+0 + GUCVJGMIXFAOAE-IGMARMGPSA-N + 92.906 + 92.90637 + [93Nb] + niobium-93 + chebi_ontology + (93)41Nb + (93)Nb + niobium-93 + CHEBI:52460 - niobium-93 atom + niobium-93 atom - niobium-93 + niobium-93 IUPAC - (93)41Nb + (93)41Nb IUPAC - (93)Nb + (93)Nb IUPAC - niobium-93 + niobium-93 ChEBI @@ -46176,39 +46167,39 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of niobium with relative atomic mass 182.950225, 14.3 atom percent natural abundance and nuclear spin 1/2. - 0 - [183W] - InChI=1S/W/i1-1 - WFKWXMTUELFFGS-BJUDXGSMSA-N - 182.950 - 182.95022 - [183W] - tungsten-183 - chebi_ontology - (183)74W - (183)W - CHEBI:52462 + The stable isotope of niobium with relative atomic mass 182.950225, 14.3 atom percent natural abundance and nuclear spin 1/2. + 0 + [183W] + InChI=1S/W/i1-1 + WFKWXMTUELFFGS-BJUDXGSMSA-N + 182.950 + 182.95022 + [183W] + tungsten-183 + chebi_ontology + (183)74W + (183)W + CHEBI:52462 - tungsten-183 + tungsten-183 - tungsten-183 + tungsten-183 IUPAC - (183)74W + (183)74W IUPAC - (183)W + (183)W IUPAC @@ -46218,39 +46209,39 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of cadmium with relative atomic mass 110.904182, 12.8 atom percent natural abundance and nuclear spin 1/2. - 0 - [111Cd] - InChI=1S/Cd/i1-1 - BDOSMKKIYDKNTQ-BJUDXGSMSA-N - 110.904 - 110.90418 - [111Cd] - cadmium-111 - chebi_ontology - (111)48Cd - (111)Cd - CHEBI:52619 + The stable isotope of cadmium with relative atomic mass 110.904182, 12.8 atom percent natural abundance and nuclear spin 1/2. + 0 + [111Cd] + InChI=1S/Cd/i1-1 + BDOSMKKIYDKNTQ-BJUDXGSMSA-N + 110.904 + 110.90418 + [111Cd] + cadmium-111 + chebi_ontology + (111)48Cd + (111)Cd + CHEBI:52619 - cadmium-111 + cadmium-111 - cadmium-111 + cadmium-111 IUPAC - (111)48Cd + (111)48Cd IUPAC - (111)Cd + (111)Cd IUPAC @@ -46260,39 +46251,39 @@ For example, A and B may be gene products and binding of B by A positively regul - The isotope of cadmium with relative atomic mass 112.904401, 12.2 atom percent natural abundance and nuclear spin 1/2. - 0 - [113Cd] - InChI=1S/Cd/i1+1 - BDOSMKKIYDKNTQ-OUBTZVSYSA-N - 112.904 - 112.90441 - [113Cd] - cadmium-113 - chebi_ontology - (113)48Cd - (113)Cd - CHEBI:52620 + The isotope of cadmium with relative atomic mass 112.904401, 12.2 atom percent natural abundance and nuclear spin 1/2. + 0 + [113Cd] + InChI=1S/Cd/i1+1 + BDOSMKKIYDKNTQ-OUBTZVSYSA-N + 112.904 + 112.90441 + [113Cd] + cadmium-113 + chebi_ontology + (113)48Cd + (113)Cd + CHEBI:52620 - cadmium-113 + cadmium-113 - cadmium-113 + cadmium-113 IUPAC - (113)48Cd + (113)48Cd IUPAC - (113)Cd + (113)Cd IUPAC @@ -46302,46 +46293,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of lithium with relative atomic mass 6.015122, 7.5 atom percent natural abundance and nuclear spin 1. - 0 - [6Li] - InChI=1S/Li/i1-1 - WHXSMMKQMYFTQS-BJUDXGSMSA-N - 6.015 - 6.01512 - [6Li] - lithium-6 - chebi_ontology - (6)3Li - (6)Li - lithium-6 - CHEBI:52621 + The stable isotope of lithium with relative atomic mass 6.015122, 7.5 atom percent natural abundance and nuclear spin 1. + 0 + [6Li] + InChI=1S/Li/i1-1 + WHXSMMKQMYFTQS-BJUDXGSMSA-N + 6.015 + 6.01512 + [6Li] + lithium-6 + chebi_ontology + (6)3Li + (6)Li + lithium-6 + CHEBI:52621 - lithium-6 atom + lithium-6 atom - lithium-6 + lithium-6 IUPAC - (6)3Li + (6)3Li IUPAC - (6)Li + (6)Li IUPAC - lithium-6 + lithium-6 ChEBI @@ -46351,46 +46342,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of yttrium with relative atomic mass 88.905848, 100 atom percent natural abundance and nuclear spin 1/2. - 0 - [89Y] - InChI=1S/Y/i1+0 - VWQVUPCCIRVNHF-IGMARMGPSA-N - 88.906 - 88.90584 - [89Y] - yttrium-89 - chebi_ontology - (89)39Y - (89)Y - yttrium-89 - CHEBI:52622 + The stable isotope of yttrium with relative atomic mass 88.905848, 100 atom percent natural abundance and nuclear spin 1/2. + 0 + [89Y] + InChI=1S/Y/i1+0 + VWQVUPCCIRVNHF-IGMARMGPSA-N + 88.906 + 88.90584 + [89Y] + yttrium-89 + chebi_ontology + (89)39Y + (89)Y + yttrium-89 + CHEBI:52622 - yttrium-89 atom + yttrium-89 atom - yttrium-89 + yttrium-89 IUPAC - (89)39Y + (89)39Y IUPAC - (89)Y + (89)Y IUPAC - yttrium-89 + yttrium-89 ChEBI @@ -46400,39 +46391,39 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of iron with relative atomic mass 56.935399, 2.1 atom percent natural abundance and nuclear spin 1/2. - 0 - [57Fe] - InChI=1S/Fe/i1+1 - XEEYBQQBJWHFJM-OUBTZVSYSA-N - 56.935 - 56.93539 - [57Fe] - iron-57 - chebi_ontology - (57)26Fe - (57)Fe - CHEBI:52623 + The stable isotope of iron with relative atomic mass 56.935399, 2.1 atom percent natural abundance and nuclear spin 1/2. + 0 + [57Fe] + InChI=1S/Fe/i1+1 + XEEYBQQBJWHFJM-OUBTZVSYSA-N + 56.935 + 56.93539 + [57Fe] + iron-57 + chebi_ontology + (57)26Fe + (57)Fe + CHEBI:52623 - iron-57 atom + iron-57 atom - iron-57 + iron-57 IUPAC - (57)26Fe + (57)26Fe IUPAC - (57)Fe + (57)Fe IUPAC @@ -46442,46 +46433,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of antimony with relative atomic mass 120.903818, 57.2 atom percent natural abundance and nuclear spin 5/2. - 0 - [121Sb] - InChI=1S/Sb/i1-1 - WATWJIUSRGPENY-BJUDXGSMSA-N - 120.904 - 120.90381 - [121Sb] - antimony-121 - chebi_ontology - (121)51Sb - (121)Sb - antimony-121 - CHEBI:52624 + The stable isotope of antimony with relative atomic mass 120.903818, 57.2 atom percent natural abundance and nuclear spin 5/2. + 0 + [121Sb] + InChI=1S/Sb/i1-1 + WATWJIUSRGPENY-BJUDXGSMSA-N + 120.904 + 120.90381 + [121Sb] + antimony-121 + chebi_ontology + (121)51Sb + (121)Sb + antimony-121 + CHEBI:52624 - antimony-121 atom + antimony-121 atom - antimony-121 + antimony-121 IUPAC - (121)51Sb + (121)51Sb IUPAC - (121)Sb + (121)Sb IUPAC - antimony-121 + antimony-121 ChEBI @@ -46501,46 +46492,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of antimony with relative atomic mass 122.904216, 42.8 atom percent natural abundance and nuclear spin 7/2. - 0 - [123Sb] - InChI=1S/Sb/i1+1 - WATWJIUSRGPENY-OUBTZVSYSA-N - 122.904 - 122.90421 - [123Sb] - antimony-123 - chebi_ontology - (123)51Sb - (123)Sb - antimony-123 - CHEBI:52626 + The stable isotope of antimony with relative atomic mass 122.904216, 42.8 atom percent natural abundance and nuclear spin 7/2. + 0 + [123Sb] + InChI=1S/Sb/i1+1 + WATWJIUSRGPENY-OUBTZVSYSA-N + 122.904 + 122.90421 + [123Sb] + antimony-123 + chebi_ontology + (123)51Sb + (123)Sb + antimony-123 + CHEBI:52626 - antimony-123 atom + antimony-123 atom - antimony-123 + antimony-123 IUPAC - (123)51Sb + (123)51Sb IUPAC - (123)Sb + (123)Sb IUPAC - antimony-123 + antimony-123 ChEBI @@ -46550,46 +46541,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of lanthanum with relative atomic mass 138.906348, 99.9 atom percent natural abundance and nuclear spin 7/2. - 0 - [139La] - InChI=1S/La/i1+0 - FZLIPJUXYLNCLC-IGMARMGPSA-N - 138.906 - 138.90636 - [139La] - lanthanum-139 - chebi_ontology - (139)57La - (139)La - lanthanum-139 - CHEBI:52627 + The stable isotope of lanthanum with relative atomic mass 138.906348, 99.9 atom percent natural abundance and nuclear spin 7/2. + 0 + [139La] + InChI=1S/La/i1+0 + FZLIPJUXYLNCLC-IGMARMGPSA-N + 138.906 + 138.90636 + [139La] + lanthanum-139 + chebi_ontology + (139)57La + (139)La + lanthanum-139 + CHEBI:52627 - lanthanum-139 atom + lanthanum-139 atom - lanthanum-139 + lanthanum-139 IUPAC - (139)57La + (139)57La IUPAC - (139)La + (139)La IUPAC - lanthanum-139 + lanthanum-139 ChEBI @@ -46599,46 +46590,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of iodine with relative atomic mass 126.904468, 100 atom percent natural abundance and nuclear spin 5/2. - 0 - [127I] - InChI=1S/I/i1+0 - ZCYVEMRRCGMTRW-IGMARMGPSA-N - 126.904 - 126.90447 - [127I] - iodine-127 - chebi_ontology - (127)53I - (127)I - iodine-127 - CHEBI:52631 + The stable isotope of iodine with relative atomic mass 126.904468, 100 atom percent natural abundance and nuclear spin 5/2. + 0 + [127I] + InChI=1S/I/i1+0 + ZCYVEMRRCGMTRW-IGMARMGPSA-N + 126.904 + 126.90447 + [127I] + iodine-127 + chebi_ontology + (127)53I + (127)I + iodine-127 + CHEBI:52631 - iodine-127 atom + iodine-127 atom - iodine-127 + iodine-127 IUPAC - (127)53I + (127)53I IUPAC - (127)I + (127)I IUPAC - iodine-127 + iodine-127 ChEBI @@ -46648,46 +46639,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of potassium with relative atomic mass 38.963707, 93.3 atom percent natural abundance and nuclear spin 3/2. - 0 - [39K] - InChI=1S/K/i1+0 - ZLMJMSJWJFRBEC-IGMARMGPSA-N - 38.964 - 38.96371 - [39K] - potassium-39 - chebi_ontology - (39)19K - (39)K - potassium-39 - CHEBI:52632 + The stable isotope of potassium with relative atomic mass 38.963707, 93.3 atom percent natural abundance and nuclear spin 3/2. + 0 + [39K] + InChI=1S/K/i1+0 + ZLMJMSJWJFRBEC-IGMARMGPSA-N + 38.964 + 38.96371 + [39K] + potassium-39 + chebi_ontology + (39)19K + (39)K + potassium-39 + CHEBI:52632 - potassium-39 atom + potassium-39 atom - potassium-39 + potassium-39 IUPAC - (39)19K + (39)19K IUPAC - (39)K + (39)K IUPAC - potassium-39 + potassium-39 ChEBI @@ -46697,39 +46688,39 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of molybdenum with relative atomic mass 94.905842, 15.9 atom percent natural abundance and nuclear spin 5/2. - 0 - [95Mo] - InChI=1S/Mo/i1-1 - ZOKXTWBITQBERF-BJUDXGSMSA-N - 94.906 - 94.90584 - [95Mo] - molybdenum-95 - chebi_ontology - (95)42Mo - (95)Mo - CHEBI:52633 + The stable isotope of molybdenum with relative atomic mass 94.905842, 15.9 atom percent natural abundance and nuclear spin 5/2. + 0 + [95Mo] + InChI=1S/Mo/i1-1 + ZOKXTWBITQBERF-BJUDXGSMSA-N + 94.906 + 94.90584 + [95Mo] + molybdenum-95 + chebi_ontology + (95)42Mo + (95)Mo + CHEBI:52633 - molybdenum-95 + molybdenum-95 - molybdenum-95 + molybdenum-95 IUPAC - (95)42Mo + (95)42Mo IUPAC - (95)Mo + (95)Mo IUPAC @@ -46739,46 +46730,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of sodium with relative atomic mass 22.989770, 100 atom percent natural abundance and nuclear spin 3/2. - 0 - [23Na] - InChI=1S/Na/i1+0 - KEAYESYHFKHZAL-IGMARMGPSA-N - 22.990 - 22.98977 - [23Na] - sodium-23 - chebi_ontology - (23)11Na - (23)Na - sodium-23 - CHEBI:52634 + The stable isotope of sodium with relative atomic mass 22.989770, 100 atom percent natural abundance and nuclear spin 3/2. + 0 + [23Na] + InChI=1S/Na/i1+0 + KEAYESYHFKHZAL-IGMARMGPSA-N + 22.990 + 22.98977 + [23Na] + sodium-23 + chebi_ontology + (23)11Na + (23)Na + sodium-23 + CHEBI:52634 - sodium-23 atom + sodium-23 atom - sodium-23 + sodium-23 IUPAC - (23)11Na + (23)11Na IUPAC - (23)Na + (23)Na IUPAC - sodium-23 + sodium-23 ChEBI @@ -46788,46 +46779,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of scandium with relative atomic mass 44.955910, 100 atom percent natural abundance and nuclear spin 7/2. - 0 - [45Sc] - InChI=1S/Sc/i1+0 - SIXSYDAISGFNSX-IGMARMGPSA-N - 44.956 - 44.95591 - [45Sc] - scandium-45 - chebi_ontology - (45)21Sc - (45)Sc - scandium-45 - CHEBI:52635 + The stable isotope of scandium with relative atomic mass 44.955910, 100 atom percent natural abundance and nuclear spin 7/2. + 0 + [45Sc] + InChI=1S/Sc/i1+0 + SIXSYDAISGFNSX-IGMARMGPSA-N + 44.956 + 44.95591 + [45Sc] + scandium-45 + chebi_ontology + (45)21Sc + (45)Sc + scandium-45 + CHEBI:52635 - scandium-45 atom + scandium-45 atom - scandium-45 + scandium-45 IUPAC - (45)21Sc + (45)21Sc IUPAC - (45)Sc + (45)Sc IUPAC - scandium-45 + scandium-45 ChEBI @@ -46837,46 +46828,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The isotope of iodine with relative atomic mass 128.904988, and nuclear spin 7/2. - 0 - [129I] - InChI=1S/I/i1+2 - ZCYVEMRRCGMTRW-NJFSPNSNSA-N - 128.905 - 128.90499 - [129I] - iodine-129 - chebi_ontology - (129)53I - (129)I - iodine-129 - CHEBI:52636 + The isotope of iodine with relative atomic mass 128.904988, and nuclear spin 7/2. + 0 + [129I] + InChI=1S/I/i1+2 + ZCYVEMRRCGMTRW-NJFSPNSNSA-N + 128.905 + 128.90499 + [129I] + iodine-129 + chebi_ontology + (129)53I + (129)I + iodine-129 + CHEBI:52636 - iodine-129 atom + iodine-129 atom - iodine-129 + iodine-129 IUPAC - (129)53I + (129)53I IUPAC - (129)I + (129)I IUPAC - iodine-129 + iodine-129 ChEBI @@ -46886,46 +46877,46 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of europium with relative atomic mass 150.919846, 47.8 atom percent natural abundance and nuclear spin 5/2. - 0 - [151Eu] - InChI=1S/Eu/i1-1 - OGPBJKLSAFTDLK-BJUDXGSMSA-N - 150.920 - 150.91986 - [151Eu] - europium-151 - chebi_ontology - (151)63Eu - (151)Eu - europium-151 - CHEBI:52637 + The stable isotope of europium with relative atomic mass 150.919846, 47.8 atom percent natural abundance and nuclear spin 5/2. + 0 + [151Eu] + InChI=1S/Eu/i1-1 + OGPBJKLSAFTDLK-BJUDXGSMSA-N + 150.920 + 150.91986 + [151Eu] + europium-151 + chebi_ontology + (151)63Eu + (151)Eu + europium-151 + CHEBI:52637 - europium-151 atom + europium-151 atom - europium-151 + europium-151 IUPAC - (151)63Eu + (151)63Eu IUPAC - (151)Eu + (151)Eu IUPAC - europium-151 + europium-151 ChEBI @@ -46935,38 +46926,38 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of bromine with relative atomic mass 78.918338, 50.69 atom percent natural abundance and nuclear spin 3/2. - 0 - [79Br] - InChI=1S/Br/i1-1 - WKBOTKDWSSQWDR-BJUDXGSMSA-N - 78.918 - 78.91834 - [79Br] - chebi_ontology - (79)35Br - (79)Br - bromine-79 - CHEBI:52743 + The stable isotope of bromine with relative atomic mass 78.918338, 50.69 atom percent natural abundance and nuclear spin 3/2. + 0 + [79Br] + InChI=1S/Br/i1-1 + WKBOTKDWSSQWDR-BJUDXGSMSA-N + 78.918 + 78.91834 + [79Br] + chebi_ontology + (79)35Br + (79)Br + bromine-79 + CHEBI:52743 - bromine-79 atom + bromine-79 atom - (79)35Br + (79)35Br IUPAC - (79)Br + (79)Br IUPAC - bromine-79 + bromine-79 ChEBI @@ -46976,38 +46967,38 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of germanium with relative atomic mass 72.923459, 7.73 atom percent natural abundance and nuclear spin 9/2. - 0 - [73Ge] - InChI=1S/Ge/i1+0 - GNPVGFCGXDBREM-IGMARMGPSA-N - 72.923 - 72.92346 - [73Ge] - chebi_ontology - (73)32Ge - (73)Ge - germanium-73 - CHEBI:52758 + The stable isotope of germanium with relative atomic mass 72.923459, 7.73 atom percent natural abundance and nuclear spin 9/2. + 0 + [73Ge] + InChI=1S/Ge/i1+0 + GNPVGFCGXDBREM-IGMARMGPSA-N + 72.923 + 72.92346 + [73Ge] + chebi_ontology + (73)32Ge + (73)Ge + germanium-73 + CHEBI:52758 - germanium-73 atom + germanium-73 atom - (73)32Ge + (73)32Ge IUPAC - (73)Ge + (73)Ge IUPAC - germanium-73 + germanium-73 ChEBI @@ -47017,38 +47008,38 @@ For example, A and B may be gene products and binding of B by A positively regul - The stable isotope of magnesium with relative atomic mass 24.985837, 10.0 atom percent natural abundance and nuclear spin 5/2. - 0 - [25Mg] - InChI=1S/Mg/i1+1 - FYYHWMGAXLPEAU-OUBTZVSYSA-N - 24.986 - 24.98584 - [25Mg] - chebi_ontology - (25)12Mg - (25)Mg - magnesium-25 - CHEBI:52763 + The stable isotope of magnesium with relative atomic mass 24.985837, 10.0 atom percent natural abundance and nuclear spin 5/2. + 0 + [25Mg] + InChI=1S/Mg/i1+1 + FYYHWMGAXLPEAU-OUBTZVSYSA-N + 24.986 + 24.98584 + [25Mg] + chebi_ontology + (25)12Mg + (25)Mg + magnesium-25 + CHEBI:52763 - magnesium-25 atom + magnesium-25 atom - (25)12Mg + (25)12Mg IUPAC - (25)Mg + (25)Mg IUPAC - magnesium-25 + magnesium-25 ChEBI @@ -47381,18 +47372,18 @@ For example, A and B may be gene products and binding of B by A positively regul - Any metal that is characterized by its rather high atomic mass and density. Although typically occurring in low concentrations, they can be found all throughout the Earth's crust (Commonly, a density of at least 5 g cm(3) is used to define a heavy metal and to differentiate it from other, ''light'' metals). - Wikipedia:Heavy_metals - chebi_ontology - heavy metals - CHEBI:5631 + Any metal that is characterized by its rather high atomic mass and density. Although typically occurring in low concentrations, they can be found all throughout the Earth's crust (Commonly, a density of at least 5 g cm(3) is used to define a heavy metal and to differentiate it from other, ''light'' metals). + Wikipedia:Heavy_metals + chebi_ontology + heavy metals + CHEBI:5631 - heavy metal + heavy metal - heavy metals + heavy metals ChEBI @@ -49590,33 +49581,33 @@ For example, A and B may be gene products and binding of B by A positively regul - A stable isotope of boron with relative atomic mass 10.0129370, 19.9 atom percent natural abundance and nuclear spin 3+. - 0 - [10B] - InChI=1S/B/i1-1 - ZOXJGFHDIHLPTG-BJUDXGSMSA-N - 10.013 - 10.01294 - [10B] - boron-10 - chebi_ontology - (10)B - CHEBI:77014 + A stable isotope of boron with relative atomic mass 10.0129370, 19.9 atom percent natural abundance and nuclear spin 3+. + 0 + [10B] + InChI=1S/B/i1-1 + ZOXJGFHDIHLPTG-BJUDXGSMSA-N + 10.013 + 10.01294 + [10B] + boron-10 + chebi_ontology + (10)B + CHEBI:77014 - boron-10 atom + boron-10 atom - boron-10 + boron-10 IUPAC - (10)B - SUBMITTER + (10)B + SUBMITTER @@ -50060,144 +50051,144 @@ For example, A and B may be gene products and binding of B by A positively regul - A zinc atom in which the nucleus contains 35 neutrons. It has a half-life of 244 days, decaying by emission of a positron (beta(+) decay), and is the most abundant and stable of the 25 known radioisotopes of zinc. - 0 - [65Zn] - InChI=1S/Zn/i1+0 - HCHKCACWOHOZIP-IGMARMGPSA-N - 64.929 - 64.92925 - [65Zn] - CAS:13982-39-3 - PMID:11431342 - PMID:13615323 - PMID:13694484 - PMID:13734409 - PMID:13744376 - PMID:13783426 - PMID:13841044 - PMID:14425466 - PMID:1682403 - PMID:17807441 - PMID:19448268 - ((65)Zn)zinc - chebi_ontology - (65)30Zn - (65)Zn - Zn-65 - zinc, isotope of mass 65 - zinc-65 - CHEBI:82623 + A zinc atom in which the nucleus contains 35 neutrons. It has a half-life of 244 days, decaying by emission of a positron (beta(+) decay), and is the most abundant and stable of the 25 known radioisotopes of zinc. + 0 + [65Zn] + InChI=1S/Zn/i1+0 + HCHKCACWOHOZIP-IGMARMGPSA-N + 64.929 + 64.92925 + [65Zn] + CAS:13982-39-3 + PMID:11431342 + PMID:13615323 + PMID:13694484 + PMID:13734409 + PMID:13744376 + PMID:13783426 + PMID:13841044 + PMID:14425466 + PMID:1682403 + PMID:17807441 + PMID:19448268 + ((65)Zn)zinc + chebi_ontology + (65)30Zn + (65)Zn + Zn-65 + zinc, isotope of mass 65 + zinc-65 + CHEBI:82623 - zinc-65 atom + zinc-65 atom - CAS:13982-39-3 + CAS:13982-39-3 ChemIDplus - PMID:11431342 + PMID:11431342 Europe PMC - PMID:13615323 + PMID:13615323 Europe PMC - PMID:13694484 + PMID:13694484 Europe PMC - PMID:13734409 + PMID:13734409 Europe PMC - PMID:13744376 + PMID:13744376 Europe PMC - PMID:13783426 + PMID:13783426 Europe PMC - PMID:13841044 + PMID:13841044 Europe PMC - PMID:14425466 + PMID:14425466 Europe PMC - PMID:1682403 + PMID:1682403 Europe PMC - PMID:17807441 + PMID:17807441 Europe PMC - PMID:19448268 + PMID:19448268 Europe PMC - ((65)Zn)zinc + ((65)Zn)zinc IUPAC - (65)30Zn + (65)30Zn IUPAC - (65)Zn + (65)Zn IUPAC - Zn-65 + Zn-65 ChEBI - zinc, isotope of mass 65 + zinc, isotope of mass 65 ChemIDplus - zinc-65 + zinc-65 ChemIDplus @@ -50302,31 +50293,31 @@ For example, A and B may be gene products and binding of B by A positively regul - Any metal which causes the onset of an allergic reaction. - chebi_ontology - allergenic metal - allergenic metals - metal allergens - CHEBI:88184 + Any metal which causes the onset of an allergic reaction. + chebi_ontology + allergenic metal + allergenic metals + metal allergens + CHEBI:88184 - metal allergen + metal allergen - allergenic metal + allergenic metal ChEBI - allergenic metals + allergenic metals ChEBI - metal allergens + metal allergens ChEBI @@ -57729,7 +57720,7 @@ The modern definition of neurosecretion has evolved to include the release of an A connective tissue cell found in bone. - + 2011-11-16T04:28:16Z @@ -57881,7 +57872,7 @@ The modern definition of neurosecretion has evolved to include the release of an A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. Cell lacks hematopoeitic lineage markers. - + 2010-01-06T03:43:27Z hematopoietic oligopotent progenitor cell, lineage-negative @@ -58099,7 +58090,7 @@ The modern definition of neurosecretion has evolved to include the release of an A hematopoietic progenitor cell that is capable of developing into only one lineage of hematopoietic cells. - + 2010-01-06T03:43:20Z hematopoietic lineage restricted progenitor cell @@ -58143,7 +58134,7 @@ The modern definition of neurosecretion has evolved to include the release of an A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. - + 2010-01-06T03:43:27Z This cell type is intended to be compatible with any vertebrate hematopoietic oligopotent progenitor cell. For mammalian hematopoietic oligopotent progenitor cells known to be lineage-negative, please use the term 'hematopoietic oligopotent progenitor cell' (CL_0001060). @@ -58190,7 +58181,7 @@ The modern definition of neurosecretion has evolved to include the release of an A secretory cell found in pancreatic acini that secretes digestive enzymes and mucins. This cell is a typical zymogenic cell, have a basal nucleus and basophilic cytoplasm consisting of regular arrays of granular endoplasmic reticulum with mitochondria and dense secretory granules. - + 2010-06-24T03:16:29Z BTO:0000028 CALOHA:TS-0737 @@ -58234,7 +58225,7 @@ The modern definition of neurosecretion has evolved to include the release of an An enteroendocrine cell that produces glucagon. - + 2010-09-10T10:48:54Z FMA:62939 type A enteroendocrine cell @@ -58255,7 +58246,7 @@ The modern definition of neurosecretion has evolved to include the release of an Specialized cardiac myocyte that is subendocardially interspersed with the regular cardiac muscle cell. They are uninucleate cylindrical cells, associated end-to-end in long rows, continue from the node to the atrioventricular bundle; relatively short compared to ordinary myocytes but are nearly twice their diameter. - + 2010-06-28T08:36:15Z BTO:0001032 FMA:14146 @@ -58281,7 +58272,7 @@ The modern definition of neurosecretion has evolved to include the release of an A specialized cardiac myocyte in the sinoatrial and atrioventricular nodes. The cell is slender and fusiform confined to the nodal center, circumferentially arranged around the nodal artery. - + 2010-06-29T11:41:37Z pacemaker cell BTO:0004190 @@ -58312,7 +58303,7 @@ The modern definition of neurosecretion has evolved to include the release of an Specialized cardiac myocyte which is in the internodal tract and atrioventricular node. The cell is more slender than ordinary atrial myocytes and has more myofibrils than nodal myocytes. - + 2010-06-29T02:39:32Z FMA:67142 transitional myocyte @@ -58333,7 +58324,7 @@ The modern definition of neurosecretion has evolved to include the release of an The myoendocrine cellis a specialized myocyte localized mainly in the right and left atrial appendages, and also scattered within other areas of the atria and along the conductive system in the ventricular septum. The most conspicuous feature distinguishing myoendocrine cells from other atrial myoctyes is the presence of membane-bounded secretory granules (these granules contain precursor of cardiodilatins or atrial natriuretic polypeptides). - + 2010-06-29T11:50:47Z FMA:67111 myocardial endocrine cell @@ -58360,7 +58351,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell derived from endoderm. - + 2010-06-29T03:38:14Z FMA:69075 endo-epithelial cell @@ -58398,7 +58389,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell derived from ectoderm. - + 2010-06-29T03:38:22Z FMA:69074 ecto-epithelial cell @@ -58436,7 +58427,7 @@ The modern definition of neurosecretion has evolved to include the release of an Epithelial cell derived from mesoderm or mesenchyme. - + 2010-06-29T03:49:14Z FMA:69076 epithelial mesenchymal cell @@ -58486,7 +58477,7 @@ The modern definition of neurosecretion has evolved to include the release of an Epithelial cell found in the ducts of the pancreas. This cell type contributes to the high luminal pH. - + 2010-06-30T08:49:43Z FMA:63099 @@ -58536,7 +58527,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cubodial epithelial cell that is continuous with the lining of intercalated ducts that drain the acinus. This cell type secretes a high pH solution to aid in activation of zymogens, and can differentiate into endocrine and exocrine pancreatic cell types. - + 2010-06-30T08:49:52Z FMA:62455 centroacinar cell of Langerhans @@ -58561,7 +58552,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cardiac myocyte that is an excitable cells in the myocardium, specifically in the conducting system of heart. - + 2010-07-21T01:33:38Z FMA:67968 specialized cardiac myocyte @@ -58598,7 +58589,7 @@ The modern definition of neurosecretion has evolved to include the release of an A leukocyte that lacks granules. - + 2010-07-22T11:30:33Z FMA:62855 agranular leukocyte @@ -58643,7 +58634,7 @@ The modern definition of neurosecretion has evolved to include the release of an This is a cell found in the gastrointestinal tract of mammals and serves as a pacemaker that triggers gut contraction. ICCs mediate inputs from the enteric nervous system to smooth muscle cells and are thought to be the cells from which gastrointestinal stromal tumors (GISTs) arise. - + 2010-07-22T03:26:00Z BTO:0003914 FMA:86573 @@ -58699,7 +58690,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells. - + 2010-07-22T04:48:15Z BTO:0004850 FMA:83621 @@ -58730,7 +58721,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell in the hilum of the ovary that produces androgens. - + 2010-08-23T11:18:18Z FMA:18710 hilar cell of ovary @@ -58769,7 +58760,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stomal cell of the ovary - + 2010-08-23T12:10:31Z FMA:72299 ovarian stromal cell @@ -58795,7 +58786,7 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels. - + 2010-08-24T02:06:40Z BTO:0001854 CALOHA:TS-1106 @@ -58839,7 +58830,7 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell found in capillaries. - + 2010-08-24T10:15:00Z BTO:0004956 CALOHA:TS-0112 @@ -58861,7 +58852,7 @@ The modern definition of neurosecretion has evolved to include the release of an Epithelial cells derived from general body ectoderm and ectoderm placodes. - + 2010-08-26T08:31:08Z FMA:70556 general ecto-epithelial cell @@ -58897,7 +58888,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell found in the lining of the stomach. - + 2010-08-25T03:22:08Z FMA:62948 epithelial cell of stomach @@ -58939,7 +58930,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mucous cell in the epithelium of the stomach. - + 2010-08-25T03:38:51Z FMA:63464 mucous cell of stomach @@ -58977,7 +58968,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stomach epithelial cell that is olumnar in form with a few short apical microvilli; relatively undifferentiated mitotic cell from which other types of gland are derived; few in number, situated in the isthmus region of the gland and base of the gastric pit. - + 2010-08-25T03:57:08Z FMA:62953 stem cell of gastric gland @@ -59021,7 +59012,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stem cell that can give rise to the cells of the liver. The term usually refers to the self-renewing pool of hepatocyte precursors in the adult liver (differently from 'hepatoblast', often used for fetal precursors of hepatocytes). - + 2010-08-30T02:00:42Z FMA:86577 HpSC @@ -59064,7 +59055,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell comprising the transparent, biconvex body separating the posterior chamber and vitreous body, and constituting part of the refracting mechanism of the mammalian eye. - + 2010-09-07T10:38:03Z FMA:70950 @@ -59104,7 +59095,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell of the cuboidal epithelium that covers the lens. The cells of the lens epithelium regulate most of the homeostatic functions of the lens. As ions, nutrients, and liquid enter the lens from the aqueous humor, Na+/K+ ATPase pumps in the lens epithelial cells pump ions out of the lens to maintain appropriate lens osmolarity and volume, with equatorially positioned lens epithelium cells contributing most to this current. The activity of the Na+/K+ ATPases keeps water and current flowing through the lens from the poles and exiting through the equatorial regions. The cells of the lens epithelium also serve as the progenitors for new lens fibers. It constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth. - + 2010-09-07T10:45:47Z FMA:67559 @@ -59144,7 +59135,7 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast in the bone marrow. - + 2010-09-07T02:25:18Z FMA:84377 marrow fibroblast @@ -59180,7 +59171,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell containing at least one nucleus. - + 2010-09-07T03:32:33Z FMA:67513 nucleate cell @@ -59223,7 +59214,7 @@ The modern definition of neurosecretion has evolved to include the release of an A circular smooth muscle cell of the iris, innervated by the ciliary nerves (parasympathetic), and acting to contract the pupil. This muscle cell derives from neuroectoderm. This smooth muscle cell results from transformation of epithelial cells to smooth muscle cells. - + 2010-09-08T08:53:42Z FMA:70611 smooth muscle fiber of sphincter of pupil @@ -59271,7 +59262,7 @@ The modern definition of neurosecretion has evolved to include the release of an A hematopoeitic stem cell found in the blood. Normally found in very limited numbers in the peripheral circulation (less than 0.1% of all nucleated cells). - + 2010-09-07T03:57:09Z BTO:0002669 FMA:86711 @@ -59316,7 +59307,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus. - + 2010-09-08T09:26:53Z epithelial cell of alimentary canal @@ -59352,7 +59343,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell of the esophagus. - + 2010-09-08T09:28:20Z FMA:63071 epithelial cell of esophagus @@ -59394,7 +59385,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell of the large intestine. - + 2010-09-08T09:28:22Z BTO:0004297 FMA:256157 @@ -59438,7 +59429,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell of the small intestine. - + 2010-09-08T09:41:46Z FMA:256159 epithelial cell of small intestine @@ -59481,7 +59472,7 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver. - + 2010-09-14T10:57:26Z FMA:63134 @@ -59514,7 +59505,7 @@ The modern definition of neurosecretion has evolved to include the release of an A type of enteroendocrine cell found in the stomach that secretes glucagon. - + 2010-09-10T10:54:42Z FMA:83411 type A cell of stomach @@ -59545,7 +59536,7 @@ The modern definition of neurosecretion has evolved to include the release of an A D cell located in the colon. - + 2010-09-10T11:37:35Z FMA:268744 colon D-cell @@ -59579,7 +59570,7 @@ The modern definition of neurosecretion has evolved to include the release of an A type D cell of the small intestine. - + 2010-09-10T01:34:22Z FMA:268736 delta cell of small intestine @@ -59613,7 +59604,7 @@ The modern definition of neurosecretion has evolved to include the release of an A type D cell found in the stomach. - + 2010-09-10T01:36:03Z FMA:83410 delta cell of stomach @@ -59658,7 +59649,7 @@ The modern definition of neurosecretion has evolved to include the release of an A PP cell located in the islets of the pancreas. - + 2010-09-10T03:30:31Z BTO:0000805 FMA:70588 @@ -59701,7 +59692,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell of a skin gland. - + 2010-09-14T12:00:07Z FMA:70657 epithelial cell of gland of skin @@ -59738,7 +59729,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell that is part of the nervous system. - + 2010-09-15T01:34:57Z CALOHA:TS-2040 FMA:70333 @@ -59776,7 +59767,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell of the supporting or framework tissue of the body, arising chiefly from the embryonic mesoderm and including adipose tissue, cartilage, and bone. - + 2010-09-15T03:01:54Z CALOHA:TS-2096 FMA:63875 @@ -59798,7 +59789,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell of the embryo. - + 2010-09-15T03:39:21Z CALOHA:TS-0263 FMA:82840 @@ -59837,7 +59828,7 @@ The modern definition of neurosecretion has evolved to include the release of an An adipocyte derived from a neural crest cell. - + 2010-09-20T02:25:25Z neural crest derived adipocyte @@ -59874,7 +59865,7 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell that lines the intracavitary lumen of the heart, separating the circulating blood from the underlying myocardium. This cell type releases a number of vasoactive substances including prostacyclin, nitrous oxide and endothelin. - + 2010-09-21T04:33:05Z FMA:75621 endocardial endothelial cell @@ -59903,7 +59894,7 @@ The modern definition of neurosecretion has evolved to include the release of an A progenitor cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and Isl-1. - + 2010-09-21T04:41:06Z pancreatic endocrine progenitor pancreatic islet progenitor cell @@ -59943,7 +59934,7 @@ The modern definition of neurosecretion has evolved to include the release of an A hematopoietic stem cell that exists during embryogenesis. - + 2010-09-22T09:05:13Z gestational hematopoietic stem cell @@ -59980,7 +59971,7 @@ The modern definition of neurosecretion has evolved to include the release of an A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. - + 2010-09-22T01:57:40Z corneal fibroblast corneal keratocyte @@ -60020,7 +60011,7 @@ The modern definition of neurosecretion has evolved to include the release of an An endo-epithelial cell of the respiratory tract. - + 2010-09-23T04:38:49Z BTO:0004533 airway epithelial cell @@ -60072,7 +60063,7 @@ The modern definition of neurosecretion has evolved to include the release of an A transversely striated, synctial muscle cell, formed by the fusion of myoblasts. - + 2010-09-24T01:13:01Z FBbt:00005812 myotubule @@ -60108,7 +60099,7 @@ The modern definition of neurosecretion has evolved to include the release of an A reticulocyte that retains the nucleus and other organelles. Found in birds, fish, amphibians and reptiles. - + 2010-10-15T09:24:05Z nucleated reticulocyte @@ -60157,7 +60148,7 @@ The modern definition of neurosecretion has evolved to include the release of an A reticulocyte lacking a nucleus and showing a basophilic reticulum under vital staining due to the presence of ribosomes. - + 2010-10-15T09:24:08Z CALOHA:TS-0864 FMA:66785 @@ -60202,7 +60193,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell located in the heart, including both muscle and non muscle cells. - + 2010-12-07T09:37:22Z BTO:0001539 CALOHA:TS-0115 @@ -60244,7 +60235,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell of the adventitial layer of ductal structures such as the uterer, defent duct, biliary duct, etc - + 2010-12-07T04:03:56Z BTO:0002441 FMA:84639 @@ -60281,7 +60272,7 @@ The modern definition of neurosecretion has evolved to include the release of an A smooth muscle cell of the intestine. - + 2011-01-17T03:39:38Z intestinal smooth muscle cell enteric smooth muscle cell @@ -60325,7 +60316,7 @@ The modern definition of neurosecretion has evolved to include the release of an An adipocyte that is part of subcutaneous adipose tissue. - + 2011-02-21T02:51:22Z subcutaneous fat cell @@ -60368,7 +60359,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell of the intrahepatic portion of the bile duct. These cells are flattened or cuboidal in shape, and have a small nuclear-to-cytoplasmic ratio relative to large/extrahepatic cholangiocytes. - + 2011-02-28T01:20:20Z small bile duct cholangiocyte intrahepatic cholangiocyte @@ -60417,7 +60408,7 @@ The modern definition of neurosecretion has evolved to include the release of an A smooth muscle cell of the aorta. - + 2011-02-28T01:42:12Z BTO:0004577 aortic smooth muscle cell @@ -60448,7 +60439,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mesenchymal stem cell that is part of the bone marrow. - + 2011-02-28T01:47:47Z mesenchymal stem cell of the bone marrow @@ -60484,7 +60475,7 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell that is part of the vein. - + 2011-02-28T03:48:11Z FMA:62104 KUPO:0001099 @@ -60513,7 +60504,7 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial progenitor cell that participates in angiogenesis during development. - + 2011-02-28T04:20:39Z See CL:0002619. embryonic blood vessel endothelial progenitor cell @@ -60549,7 +60540,7 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast of the aortic adventitia. - + 2011-02-28T04:43:41Z fibroblast of the aortic adventitia @@ -60592,7 +60583,7 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast that is part of the heart. - + 2011-02-28T04:57:44Z cardiac fibroblast fibroblast of cardiac tissue @@ -60639,7 +60630,7 @@ The modern definition of neurosecretion has evolved to include the release of an - + 2011-02-28T05:05:33Z fibroblast of dermis @@ -60675,7 +60666,7 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast that is part of lung. - + 2011-02-28T05:11:03Z BTO:0000764 CALOHA:TS-0575 @@ -60720,7 +60711,7 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast of pulmonary artery. - + 2011-02-28T05:22:27Z fibroblast of pulmonary artery @@ -60762,7 +60753,7 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell of the intestine. - + 2011-03-01T05:18:31Z intestinal epithelial cell @@ -60797,7 +60788,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mesenchymal stem cell of adipose tissue. - + 2011-03-01T09:57:17Z mesenchymal stem cell of adipose mesenchymal stem cell of adipose tissue @@ -60828,7 +60819,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mesenchymal stem cell of liver. - + 2011-03-01T09:58:51Z hepatic mesenchymal stem cell @@ -60870,7 +60861,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mesenchymal stem cell of the vertebrae. - + 2011-03-01T10:40:27Z vertebral mesenchymal stem cell @@ -60912,7 +60903,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stromal cell of the pancreas. - + 2011-03-02T02:40:41Z stromal cell of pancreas @@ -60957,7 +60948,7 @@ The modern definition of neurosecretion has evolved to include the release of an A blood vessel endothelial cell that is part of the retina. - + 2011-03-06T03:28:27Z @@ -61000,7 +60991,7 @@ The modern definition of neurosecretion has evolved to include the release of an A smooth muscle cell of the bachiocephalic vasculature. - + 2011-03-06T05:00:58Z smooth muscle cell of the brachiocephalic vasculature @@ -61037,7 +61028,7 @@ The modern definition of neurosecretion has evolved to include the release of an A vascular associated smooth muscle cell of the brain vasculature. - + 2011-03-06T05:01:20Z smooth muscle cell of the brain vasculature @@ -61079,7 +61070,7 @@ The modern definition of neurosecretion has evolved to include the release of an A smooth muscle of the pulmonary artery. - + 2011-03-06T05:01:28Z BTO:0003336 @@ -61116,7 +61107,7 @@ The modern definition of neurosecretion has evolved to include the release of an A smooth muscle cell of the subclavian artery. - + 2011-03-06T05:01:52Z smooth muscle cell of the subclavian artery @@ -61151,7 +61142,7 @@ The modern definition of neurosecretion has evolved to include the release of an Smooth muscle cell of the carotid artery. - + 2011-03-06T05:01:56Z smooth muscle cell of the carotid artery @@ -61186,7 +61177,7 @@ The modern definition of neurosecretion has evolved to include the release of an A smooth muscle cell of the esophagus. - + 2011-03-06T05:48:17Z smooth muscle cell of the esophagus @@ -61228,7 +61219,7 @@ The modern definition of neurosecretion has evolved to include the release of an A neuron of the raphe nuclei. - + 2011-03-06T07:42:06Z raphe nuclei neuron @@ -61270,7 +61261,7 @@ The modern definition of neurosecretion has evolved to include the release of an A neuron of the ventral spinal cord. - + 2011-03-06T07:46:03Z neuron of the ventral spinal cord @@ -61313,7 +61304,7 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast of skin. - + 2011-03-14T12:31:49Z BTO:0001255 CALOHA:TS-0935 @@ -61356,7 +61347,7 @@ The modern definition of neurosecretion has evolved to include the release of an - + 2011-06-21T12:29:31Z epithelial cell of lower respiratory tract @@ -61386,7 +61377,7 @@ The modern definition of neurosecretion has evolved to include the release of an A glandular epithelial cell of the esophagus. - + 2011-07-08T03:55:57Z FMA:86548 glandular cell of esophagus @@ -61429,7 +61420,7 @@ The modern definition of neurosecretion has evolved to include the release of an A glandular epithelial cell of the large intestine. - + 2011-07-08T04:03:01Z FMA:87194 glandular cell of the large intestine @@ -61466,7 +61457,7 @@ The modern definition of neurosecretion has evolved to include the release of an A glandular epithelial cell that is part of the stomach. - + 2011-07-11T01:20:35Z CALOHA:TS-1284 FMA:86554 @@ -61509,7 +61500,7 @@ The modern definition of neurosecretion has evolved to include the release of an A myocardial endocrine cell that is part of the atrium. - + 2011-07-11T02:45:39Z FMA:83389 myocardial endocrine cell of atrium @@ -61534,7 +61525,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stem cell that can give rise to multiple cell types (i.e. smooth muscle, endothelial) in the developing heart. - + 2011-07-11T03:15:38Z cardiovascular progenitor cell CPC @@ -61577,7 +61568,7 @@ The modern definition of neurosecretion has evolved to include the release of an A multi-fate stem cell that can give rise to different retinal cell types including rod and cone cells. - + 2011-08-16T02:38:01Z retinal progenitor cell @@ -61605,7 +61596,7 @@ The modern definition of neurosecretion has evolved to include the release of an A neuroblast derived from a neural crest cell. - + 2011-08-22T09:24:15Z neural crest derived neuroblast @@ -61636,7 +61627,7 @@ The modern definition of neurosecretion has evolved to include the release of an A PP cell found in intestine. - + 2011-09-27T11:59:01Z PP cell of intestine @@ -61759,7 +61750,7 @@ The modern definition of neurosecretion has evolved to include the release of an Cell that has the potential to form a skeletal cell type (e.g. cells in periosteum, cells in marrow) and produce extracellular matrix (often mineralized) and skeletal tissue (often mineralized). - + 2012-06-15T02:51:27Z scleroblast Needs logical definition. Should be capable_of skeletal system morphogenesis? or skeletal tissue development? needs to be added to GO. NOTES:a cell type of the early embryo (see also: mesenchymal cells) that will give rise to mineralized connective tissue. Scleroblasts can differentiate into osteoblasts (bone-forming cells), chondroblasts (cartilage-forming cells), odontoblasts (dentin-forming cells), ameloblasts (enamel-forming cells). The mesenchymal cells developing into osteoblasts and chondroblasts are derived from the mesoderm. Those developing into odontoblasts are neural crest cells. Those developing into ameloblasts are derived from the ectoderm. (http://www.copewithcytokines.de/cope.cgi?key=scleroblasts) @@ -61798,7 +61789,7 @@ The modern definition of neurosecretion has evolved to include the release of an Cell that is part of the neural crest region of the neuroepithelium, prior to migration. Note that not all premigratory neural crest cells may become migratory neural crest cells. - + 2012-06-27T08:27:35Z premigratory neural crest cell @@ -61816,7 +61807,7 @@ The modern definition of neurosecretion has evolved to include the release of an Skeletogenic cell that has the potential to develop into a chondroblast; and arises from neural crest, meseosdermal and notochordal and connective tissue cells. - + 2012-06-27T10:44:01Z prechondroblast @@ -62205,7 +62196,7 @@ The modern definition of neurosecretion has evolved to include the release of an - + 2017-07-09T19:12:36Z visual system neuron @@ -62218,7 +62209,7 @@ The modern definition of neurosecretion has evolved to include the release of an Mural cells are pericytes and the vascular smooth muscle cells (vSMCs) of the microcirculation. - + 2020-02-29T17:33:55Z @@ -62255,7 +62246,7 @@ The modern definition of neurosecretion has evolved to include the release of an - + 2020-02-29T17:37:00Z microcirculation associated smooth muscle cell @@ -62398,7 +62389,7 @@ The modern definition of neurosecretion has evolved to include the release of an An enteroendocrine cell that is located in the small intestine. - + small intestine enteroendocrine cell enteroendocrine cell of small intestine @@ -62434,7 +62425,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stromal cell found in the lamina propria of the large intestine. - + stromal cell of lamina propria of large intestine @@ -62469,7 +62460,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stromal cell found in the lamina propria of the small intestine. - + stromal cell of lamina propria of small intestine @@ -62500,7 +62491,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mesothelial cell that is part of the small intestine. - + mesothelial cell of small intestine @@ -62531,7 +62522,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mesothelial cell that is part of the colon. - + mesothelial cell of large intestine mesothelial cell of colon @@ -62568,7 +62559,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stromal cell found in the lamina propria of the colon. - + stromal cell of colon lamina propria stromal cell of lamina propria of colon @@ -62599,7 +62590,7 @@ The modern definition of neurosecretion has evolved to include the release of an An enteroendocrine cell that is located in the colon. - + colon enteroendocrine cell enteroendocrine cell of colon @@ -62635,7 +62626,7 @@ The modern definition of neurosecretion has evolved to include the release of an A smooth muscle cell that is located in the anorectum. - + anorectum smooth muscle cell smooth muscle cell of anorectum @@ -62675,7 +62666,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stromal cell found in the lamina propria of the anorectum. - + stromal cell of anorectum lamina propria @@ -62711,7 +62702,7 @@ The modern definition of neurosecretion has evolved to include the release of an An enteroendocrine cell that is located in the anorectum. - + anorectum enteroendocrine cell enteroendocrine cell of anorectum @@ -62747,8 +62738,8 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell that is part of a hepatic portal vein. - - 2021-12-13T14:01:05Z + + 2021-12-13T14:01:05Z portal endothelial cell EFO:0010704 @@ -62787,8 +62778,8 @@ The modern definition of neurosecretion has evolved to include the release of an A skeletal muscle fiber found in an embryo. In mammalian embryos, skeletal muscle expresses myosin heavy chain-embryonic (MyHC-emb, encoded by the MYH3 gene), which regulates skeletal muscle development. - - 2022-02-21T15:39:10Z + + 2022-02-21T15:39:10Z embryonic skeletal muscle fiber @@ -62826,8 +62817,8 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast located in the portal triad. Hepatic portal fibroblast are a non-parenchymal cell population located adjacent to bile duct epithelia in liver and are distinct from stellate cells. They differentiate into fibrogenic myofibroblasts during chronic injury states producing high levels of collagen. - - 2022-03-17T12:00:44Z + + 2022-03-17T12:00:44Z portal fibroblast hepatic portal fibroblast @@ -62860,7 +62851,7 @@ The modern definition of neurosecretion has evolved to include the release of an A stromal cell that is part_of a bone marrow. - + bone marrow stromal cell stromal cell of bone marrow @@ -62884,7 +62875,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mononuclear cell that is part_of a bone marrow. - + bone marrow mononuclear cell mononuclear cell of bone marrow @@ -63218,7 +63209,7 @@ The modern definition of neurosecretion has evolved to include the release of an A mesothelial cell that is part of the epicardium. - + mesothelial cell of epicardium @@ -63246,7 +63237,7 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast that is part of upper back skin. - + fibroblast of upper back skin @@ -63274,7 +63265,7 @@ The modern definition of neurosecretion has evolved to include the release of an A fibroblast that is part of skin of back. - + fibroblast of skin of back @@ -63303,7 +63294,7 @@ The modern definition of neurosecretion has evolved to include the release of an A precursor cell that has a tendency to differentiate into a specific type of cell. They are descendants of stem cells, only they are more constrained in their differentiation potential or capacity for self-renewal, and are often more limited in both senses. - + progenitor cell @@ -63333,7 +63324,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of skeletal muscle tissue. - + skeleton muscle fibroblast skeletal muscle fibroblast @@ -63364,7 +63355,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any microvascular endothelial cell that is part of the dermis. - + DMEC cell dermal microvascular endothelium cell dermal microvascular endothelial cell @@ -63469,7 +63460,7 @@ The modern definition of neurosecretion has evolved to include the release of an Cytoplasm that exhibits a characteristic staining and color, red or pink, with Eosin stain. - + 2009-12-22T04:23:25Z eosinophilic acidophilic cytoplasm @@ -63505,7 +63496,7 @@ The modern definition of neurosecretion has evolved to include the release of an Cytoplasm that exhibits molecular interaction for basic dyes under specific pH conditions. - + 2009-12-22T04:24:54Z basophilic cytoplasm @@ -63540,7 +63531,7 @@ The modern definition of neurosecretion has evolved to include the release of an Cytoplasm that exhibits affinity for both basic and acid stains under specific pH conditions. - + 2009-12-28T04:25:23Z polychromatophilic cytoplasm @@ -63575,7 +63566,7 @@ The modern definition of neurosecretion has evolved to include the release of an A nucleus size quality which is relatively high compared to the amount of cytoplasm present in the same cell. - + 2009-12-23T10:53:24Z increased nucleus size @@ -63611,8 +63602,8 @@ The modern definition of neurosecretion has evolved to include the release of an A smooth muscle cell that is part of any blood vessel. - - 2020-07-21T12:42:48Z + + 2020-07-21T12:42:48Z smooth muscle cell of blood vessel blood vessel smooth muscle cell @@ -63648,8 +63639,8 @@ The modern definition of neurosecretion has evolved to include the release of an An epithelial cell of the extrahepatic bile ducts, including the left and right hepatic duct, common hepatic duct, and common bile duct. They are columnar in shape, and have a large nuclear-to-cytoplasmic ratio relative to small/intrahepatic cholangiocytes. - - 2020-09-03T12:24:24Z + + 2020-09-03T12:24:24Z large bile duct cholangiocyte extrahepatic cholangiocyte @@ -63690,8 +63681,8 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell found in the periportal region hepatic sinusoid, near the portal triad. The fenestrae of these cells are larger but fewer in number compared with those of endothelial cells near the centrilobular region of the hepatic sinusoid. - - 2020-09-09T13:56:47Z + + 2020-09-09T13:56:47Z EFO:0010705 periportal LSEC periportal hepatic sinusoidal endothelial cell @@ -63740,8 +63731,8 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell found in the centrilobular region hepatic sinusoid, near the central vein. The fenestrae of these cells are smaller but more numerous compared with those of endothelial cells near the periportal region of the hepatic sinusoid. - - 2020-09-10T12:38:29Z + + 2020-09-10T12:38:29Z EFO:0010706 central venous hepatic sinusoidal endothelial cell pericentral LSEC @@ -66114,7 +66105,7 @@ The modern definition of neurosecretion has evolved to include the release of an A leukocyte with a single non-segmented nucleus in the mature form found in the circulatory pool of blood. - + 2014-02-11T17:29:04Z CL:2000001 peripheral blood mononuclear cell @@ -66150,7 +66141,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any blood vessel endothelial cell that is part of a microvascular endothelium. - + 2014-06-04T15:07:42Z CL:2000008 microvascular endothelial cell @@ -66187,7 +66178,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any blood vessel endothelial cell that is part of a dermis. - + 2014-06-04T15:12:06Z CL:2000010 dermis blood vessel endothelial cell @@ -66223,7 +66214,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any skin fibroblast that is part of a skin of abdomen. - + 2014-06-04T15:18:16Z CL:2000013 fibroblast of skin of abdomen @@ -66254,7 +66245,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any lung endothelial cell that is part of a microvascular endothelium. - + 2014-06-04T16:00:56Z CL:2000016 lung microvascular endothelial cell @@ -66290,7 +66281,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any photoreceptor cell that is part of a compound eye. - + 2014-06-24T23:16:45Z FBbt:00004211 CL:2000019 @@ -66327,7 +66318,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any native cell that is part of a inner cell mass. - + 2014-06-24T23:16:53Z CL:2000020 inner cell mass cell @@ -66364,7 +66355,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any native cell that is part of a cardiac septum. - + 2014-06-24T23:17:07Z CL:2000022 cardiac septum cell @@ -66400,7 +66391,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any neuron that is part of a central nervous system. - + 2014-06-25T01:17:43Z CL:2000029 central nervous system neuron @@ -66436,7 +66427,7 @@ The modern definition of neurosecretion has evolved to include the release of an A neuron that is part of a peripheral nervous system. - + 2014-06-25T02:28:17Z FMA:84664 PNS neuron @@ -66476,7 +66467,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of a embryo. - + 2014-07-09T00:12:00Z CL:2000042 embryonic fibroblast @@ -66514,7 +66505,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any microvascular endothelial cell that is part of a brain. - + 2014-07-09T00:24:53Z CL:2000044 brain microvascular endothelial cell @@ -66550,7 +66541,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any cardiac muscle cell that is part of a cardiac ventricle. - + 2014-08-12T20:50:28Z CL:2000046 ventricular cardiac muscle cell @@ -66588,7 +66579,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any motor neuron that is part of a brainstem. - + 2014-10-02T23:52:53Z CL:2000047 brainstem motor neuron @@ -66625,7 +66616,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of a spleen. - + 2014-10-06T18:58:47Z CL:2000051 splenic fibroblast @@ -66662,7 +66653,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any endothelial cell that is part of a spleen. - + 2014-10-06T19:06:04Z CL:2000053 @@ -66700,7 +66691,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of a female gonad. - + 2014-10-07T17:57:42Z CL:2000063 http://www.sciencellonline.com/site/productInformation.php?keyword=7330 @@ -66737,7 +66728,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any epithelial cell that is part of a female gonad. - + 2014-10-07T17:59:13Z CL:2000064 http://www.sciencellonline.com/site/productInformation.php?keyword=7310 @@ -66775,7 +66766,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of a cardiac ventricle. - + 2014-10-07T18:35:38Z CL:2000066 @@ -66814,7 +66805,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of a cardiac atrium. - + 2014-10-07T18:36:54Z CL:2000067 @@ -66852,7 +66843,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of a pericardium. - + 2014-10-07T18:38:06Z CL:2000068 http://www.sciencellonline.com/site/productInformation.php?keyword=6430 @@ -66890,7 +66881,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of a gallbladder. - + 2014-10-07T18:41:43Z CL:2000069 http://www.sciencellonline.com/site/productInformation.php?keyword=5430 @@ -66928,7 +66919,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any fibroblast that is part of a optic choroid. - + 2014-10-07T18:50:43Z CL:2000070 http://www.sciencellonline.com/site/productInformation.php?keyword=6620 @@ -66966,7 +66957,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any microvascular endothelial cell that is part of a adipose tissue. - + 2014-10-07T22:13:45Z CL:2000072 http://www.sciencellonline.com/site/productInformation.php?keyword=7200 @@ -67003,7 +66994,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any migratory neural crest cell that is part of a cardiac neural crest. - + 2014-11-05T01:18:43Z cardiac neural crest cell CL:2000073 @@ -67047,7 +67038,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any leukocyte that is part of a spleen. - + 2014-11-05T01:26:50Z CL:2000074 Splenocytes is a vague term that refers to any one of the different white blood cell types in the spleen. This name is seen many references as such and is not explained further, necessitating a need for this terminology. @@ -67084,7 +67075,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any mesenchymal stem cell of adipose tissue that is part of an abdomen. - + 2014-12-02T19:10:34Z mesenchymal stem cell of abdominal adipose CL:2000080 @@ -67122,7 +67113,7 @@ The modern definition of neurosecretion has evolved to include the release of an A ciliated epithelial cell of the esophagus. - + 2019-02-09T16:40:30Z CL:3000000 ciliated epithelial cell of esophagus @@ -67154,7 +67145,7 @@ The modern definition of neurosecretion has evolved to include the release of an Peripheral sensory neuron. - + 2019-02-25T19:34:33Z CL:3000004 peripheral sensory neuron @@ -67193,7 +67184,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cell that is part of the brain vasculature. - + brain vascular cell @@ -67230,7 +67221,7 @@ The modern definition of neurosecretion has evolved to include the release of an A GABAergic inhibitory neuron that is derived from the midbrain. - + midbrain-derived inhibitory neuron @@ -67265,7 +67256,7 @@ The modern definition of neurosecretion has evolved to include the release of an A neuron that is part of the somatic sensory system. Somatosensory neurons innervate the skin or integument to detect different types of thermal, chemical, and mechanical touch stimuli. - + somatosensory neuron @@ -67300,7 +67291,7 @@ The modern definition of neurosecretion has evolved to include the release of an Any capillary endothelial cell that is part of a lung. - + 2021-11-23T02:31:40Z lung capillary endothelial cell pulmonary capillary endothelial cell @@ -67331,7 +67322,7 @@ The modern definition of neurosecretion has evolved to include the release of an A ciliated cell of the respiratory system. Ciliated cells are present in airway epithelium. - 2023-01-25T11:06:01Z + 2023-01-25T11:06:01Z ciliated cell of the respiratory tract respiratory ciliated cell @@ -67368,7 +67359,7 @@ The modern definition of neurosecretion has evolved to include the release of an A(n) vein endothelial cell that is part of a(n) respiratory system. - + vein endothelial cell of respiratory system @@ -67406,9 +67397,9 @@ The modern definition of neurosecretion has evolved to include the release of an A megakaryocyte that is resident in the lung connective tissue. - - - 2023-03-16T11:31:23Z + + + 2023-03-16T11:31:23Z lung resident megakaryocyte lung-resident megakaryocyte MKL @@ -67475,8 +67466,8 @@ The modern definition of neurosecretion has evolved to include the release of an A neuron that releases catecholamine as a neurotransmitter. - - 2023-05-18T12:07:45Z + + 2023-05-18T12:07:45Z Frequently used when describing the developing nervous system in zebrafish. A catecholaminergic neuron expresses tyrosine hydroxylase (TH), tyrosine hydroxylase 2 (TH2), aromatic amino acid decarboxylase (AADC), dopamine b-hydroxylase (DBH), and phenylethanolamine-N-methyl transferase (PEMT), which are enzymes necessary for catecholamine synthesis. catecholaminergic neuron @@ -67521,8 +67512,8 @@ The modern definition of neurosecretion has evolved to include the release of an A cell that is adjacent to a vessel. A perivascular cell plays a crucial role in maintaining vascular function and tissue homeostasis. This cell type regulates vessel integrity and flow dynamics. - - 2023-08-22T13:40:28Z + + 2023-08-22T13:40:28Z perivascular cell @@ -67558,7 +67549,7 @@ The modern definition of neurosecretion has evolved to include the release of an An endothelial cell that is part of a central vein of liver. - + endothelial cell of central vein endothelial cell of central vein of liver @@ -67599,8 +67590,8 @@ The modern definition of neurosecretion has evolved to include the release of an Any mesenchymal stem cell of adipose tissue that is part of an orbital region. - - 2023-09-18T10:43:00Z + + 2023-09-18T10:43:00Z OAMSC Orbital ASCs orbital adipose-derived mesenchymal stem cell @@ -67765,7 +67756,7 @@ The modern definition of neurosecretion has evolved to include the release of an A respiratory system disease which involves the lower respiratory tract. - + url:http://en.wikipedia.org/wiki/lower_respiratory_tract @@ -67803,8 +67794,8 @@ The modern definition of neurosecretion has evolved to include the release of an A heart disease and a myopathy that is characterized by deterioration of the function of the heart muscle. - - + + url:http://en.wikipedia.org/wiki/Cardiomyopathy url:http://www.nhlbi.nih.gov/health/health-topics/topics/cm/ @@ -67827,7 +67818,7 @@ The modern definition of neurosecretion has evolved to include the release of an A glomerulonephritis that is characterized by hardening of the glomerulus in the kidney. - + url:http://en.wikipedia.org/wiki/Glomerulosclerosis @@ -67874,9 +67865,9 @@ The modern definition of neurosecretion has evolved to include the release of an An infratentorial cancer that is located_in the lower part of the brain and is a type of primitive neuroectodermal tumor. - - - + + + url:http://en.wikipedia.org/wiki/Medulloblastoma url:http://www.cancer.gov/dictionary?CdrID=45780 url:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3306779/ @@ -67898,7 +67889,7 @@ The modern definition of neurosecretion has evolved to include the release of an A disease of mental health that occur during a child's developmental period between birth and age 18 resulting in retarding of the child's psychological or physical development. - + url:http://en.wikipedia.org/wiki/Developmental_disorders @@ -67932,8 +67923,8 @@ The modern definition of neurosecretion has evolved to include the release of an A hematologic cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs. - - + + url:http://en.wikipedia.org/wiki/Lymphoma url:http://www.lymphoma.org/site/pp.asp?c=bkLTKaOQLmK8E&b=6300161 url:http://www.nlm.nih.gov/medlineplus/lymphoma.html @@ -67961,7 +67952,7 @@ The modern definition of neurosecretion has evolved to include the release of an A disease of cellular proliferation that results in abnormal growths in the body, which do not invade or destroy the surrounding tissue but, given enough time, will transform into a cancer. - + url:http://en.wikipedia.org/wiki/Neoplasm @@ -67988,8 +67979,8 @@ The modern definition of neurosecretion has evolved to include the release of an A disease of cellular proliferation that results in abnormal growths in the body which lack the ability to metastasize. - - + + url:http://en.wikipedia.org/wiki/Benign_neoplasm url:http://www.nlm.nih.gov/medlineplus/benigntumors.html @@ -68018,7 +68009,7 @@ The modern definition of neurosecretion has evolved to include the release of an An eye disease that affects the cornea, which is the transparent surface of the eye that assists in light refraction. - + url:https://ncit.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&ns=ncit&code=C26731 @@ -68042,7 +68033,7 @@ The modern definition of neurosecretion has evolved to include the release of an A cardiovascular system disease that involves the heart's electrical conduction system. - + url:http://en.wikipedia.org/wiki/Conduction_system_of_the_heart @@ -68071,7 +68062,7 @@ The modern definition of neurosecretion has evolved to include the release of an A prostate cancer that has_material_basis_in abnormally proliferating cells derives_from epithelial cells. - + url:http://en.wikipedia.org/wiki/Carcinoma @@ -68104,7 +68095,7 @@ The modern definition of neurosecretion has evolved to include the release of an A leukemia that has_material_basis_in a B-cell or T-cell lineage involving primarily the bone marrow and the peripheral blood. - + url:http://www.cancer.gov/dictionary?CdrID=616067 @@ -68152,9 +68143,9 @@ The modern definition of neurosecretion has evolved to include the release of an A lymphocytic leukemia characterized by over production of B-cells and their accumulation in bone marrow and blood. - - - + + + url:http://en.wikipedia.org/wiki/B-cell_chronic_lymphocytic_leukemia url:http://www.cancer.gov/dictionary?cdrid=346545 @@ -68210,7 +68201,7 @@ The modern definition of neurosecretion has evolved to include the release of an A gastrointestinal system cancer that is located_in the stomach. - + url:http://cancergenome.nih.gov/cancersselected/stomach-esophagealcancer url:http://en.wikipedia.org/wiki/Stomach @@ -68245,9 +68236,9 @@ OMIM mapping confirmed by DO. [SN]. A tauopathy that is characterized by memory lapses, confusion, emotional instability and progressive loss of mental ability and results in progressive memory loss, impaired thinking, disorientation, and changes in personality and mood starting and leads in advanced cases to a profound decline in cognitive and physical functioning and is marked histologically by the degeneration of brain neurons especially in the cerebral cortex and by the presence of neurofibrillary tangles and plaques containing beta-amyloid. - - - + + + url:http://en.wikipedia.org/wiki/Alzheimer%27s_disease url:http://www.merriam-webster.com/medical/alzheimer%27s%20disease url:http://www.nia.nih.gov/alzheimers/publication/alzheimers-disease-fact-sheet @@ -68290,7 +68281,7 @@ OMIM mapping confirmed by DO. [SN]. An urinary system cancer that results_in malignant growth located_in the urinary bladder. - + url:http://en.wikipedia.org/wiki/Bladder_cancer @@ -68320,9 +68311,9 @@ OMIM mapping confirmed by DO. [SN]. A cell type cancer that has_material_basis_in abnormally proliferating cells derives from embryonic mesoderm. - - - + + + url:http://cancergenome.nih.gov/cancersselected/Sarcoma url:http://en.wikipedia.org/wiki/Sarcoma url:http://www.cancer.gov/dictionary?CdrID=45562 @@ -68352,7 +68343,7 @@ OMIM mapping confirmed by DO. [SN]. A cardiovascular system disease that involves the heart. - + url:http://en.wikipedia.org/wiki/Heart_disease @@ -68377,7 +68368,7 @@ OMIM mapping confirmed by DO. [SN]. A lower respiratory tract disease that affects the airways leading into the lungs, which is caused due to inflammation of the bronchi and bronchioles, infection, or blockage. - + url:https://www.ncbi.nlm.nih.gov/pubmed/11685087 @@ -68407,9 +68398,9 @@ OMIM mapping confirmed by DO. [SN]. A cancer that affects the blood or bone marrow characterized by an abnormal proliferation of blood cells. - - - + + + url:http://en.wikipedia.org/wiki/Leukemia url:http://www.cancer.gov/dictionary?CdrID=45343 @@ -68475,7 +68466,7 @@ OMIM mapping confirmed by DO. [SN]. A disease of anatomical entity which occurs in the blood, heart, blood vessels or the lymphatic system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells or lymph to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis. - + url:http://en.wikipedia.org/wiki/Circulatory_system @@ -68497,7 +68488,7 @@ OMIM mapping confirmed by DO. [SN]. A cognitive disorder resulting from a loss of brain function affecting memory, thinking, language, judgement and behavior. - + url:http://www.nlm.nih.gov/medlineplus/ency/article/000739.htm @@ -68560,8 +68551,8 @@ OMIM mapping confirmed by DO. [SN]. A central nervous system cancer that is characterized by the growth of abnormal cells in the tissues of the brain. - - + + url:http://www.cancer.gov/dictionary?CdrID=387264 @@ -68586,7 +68577,7 @@ OMIM mapping confirmed by DO. [SN]. A brain disease that is characterized by loss of structure or function of neurons, including death of neurons and loss of brain tissue. - + url:https://en.wikipedia.org/wiki/Neurodegeneration @@ -68611,7 +68602,7 @@ OMIM mapping confirmed by DO. [SN]. A disease that is characterized by abnormally rapid cell division. - + url:http://en.wikipedia.org/w/index.php?title=Cell_proliferation @@ -68641,7 +68632,7 @@ OMIM mapping confirmed by DO. [SN]. A disease that involves a psychological or behavioral pattern generally associated with subjective distress or disability that occurs in an individual, and which are not a part of normal development or culture. - + url:http://en.wikipedia.org/wiki/Mental_disorder @@ -68665,7 +68656,7 @@ OMIM mapping confirmed by DO. [SN]. A disease of mental health that involve long-term patterns of thoughts and behaviors that cause serious problems with relationships and work. - + url:http://www.nlm.nih.gov/medlineplus/personalitydisorders.html @@ -68693,7 +68684,7 @@ OMIM mapping confirmed by DO. [SN]. A thoracic disease which may involve inflammation of pleura, collection of air within the pleural cavity, abnormal collection of pleural fluid, abnormal growths on the pleura (pleural tumor) and pleural plaques. The main causes of pleural diseases including pleural effusions are congestive heart failure, malignancy, parapneumonic infections and pulmonary embolism. - + url:http://en.wikipedia.org/wiki/Pleural_disease @@ -68721,7 +68712,7 @@ OMIM mapping confirmed by DO. [SN]. A disease of mental health that affects cognitive functions including memory processing, perception and problem solving. - + url:http://en.wikipedia.org/wiki/Cognitive_disorder @@ -68750,8 +68741,8 @@ OMIM mapping confirmed by DO. [SN]. A disease of anatomical entity that located_in the respiratory system which extends from the nasal sinuses to the diaphragm. - - + + url:http://en.wikipedia.org/wiki/File:Respiratory_system_complete_en.svg url:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=respiratory%20system @@ -68793,9 +68784,9 @@ OMIM mapping confirmed by DO. [SN]. A thoracic cancer that originates in the mammary gland. - - - + + + url:http://en.wikipedia.org/wiki/Breast_cancer url:http://en.wikipedia.org/wiki/Mammary url:http://www.cancer.gov/cancertopics/types/breast @@ -68835,8 +68826,8 @@ OMIM mapping confirmed by DO. [SN]. A disease of cellular proliferation that is malignant and primary, characterized by uncontrolled cellular proliferation, local cell invasion and metastasis. - - + + url:http://en.wikipedia.org/wiki/cancer url:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=cancer @@ -68880,7 +68871,7 @@ OMIM mapping confirmed by DO. [SN]. A cardiovascular system disease that primarily affects the blood vessels which includes the arteries, veins and capillaries that carry blood to and from the heart. - + url:http://en.wikipedia.org/wiki/Vascular_disease @@ -68905,7 +68896,7 @@ OMIM mapping confirmed by DO. [SN]. A pericardium disease that is characterized by an inflammation of the pericardium and has_symptom chest pain. - + url:http://en.wikipedia.org/wiki/Pericarditis @@ -68938,8 +68929,8 @@ OMIM mapping confirmed by DO. [SN]. A cell type cancer that has_material_basis_in abnormally proliferating cells derives_from melanocytes which are found in skin, the bowel and the eye. - - + + url:http://en.wikipedia.org/wiki/Melanoma url:https://www.ncbi.nlm.nih.gov/pubmed/22123420 @@ -68991,7 +68982,7 @@ OMIM mapping confirmed by DO. [SN]. A cognitive disorder that involves an excessive, irrational dread of everyday situations. - + url:http://www.nimh.nih.gov/health/topics/anxiety-disorders/index.shtml @@ -69044,8 +69035,8 @@ OMIM mapping confirmed by DO. [SN]. A female reproductive organ cancer that is located_in the ovary. - - + + url:http://www.cancer.gov/dictionary?CdrID=445074 @@ -69086,7 +69077,7 @@ OMIM mapping confirmed by DO. [SN]. A cognitive disorder that involves abnormal thinking and perceptions resulting in a disconnection with reality. - + url:http://www.nlm.nih.gov/medlineplus/psychoticdisorders.html @@ -69132,7 +69123,7 @@ OMIM mapping confirmed by DO. [SN]. A skin carcinoma affecting basal cells. - + url:http://en.wikipedia.org/wiki/Basal-cell_carcinoma @@ -69172,9 +69163,9 @@ OMIM mapping confirmed by DO. [SN]. An organ system cancer located in the hematological system that is characterized by uncontrolled cellular proliferation in blood, bone marrow and lymph nodes. - - - + + + url:http://en.wikipedia.org/wiki/Blood_cancer url:http://www.cancer.gov/dictionary/?CdrID=45708 @@ -69198,8 +69189,8 @@ OMIM mapping confirmed by DO. [SN]. A brain disease that is characterized by damage to brain substance located_in cerebellum; has_symptom ataxia, has_symptom dysarthria, and has_symptom cerebellar cognitive affective syndrome. - - + + url:https://en.wikipedia.org/wiki/Cerebellum url:https://www.ncbi.nlm.nih.gov/pubmed/15377747 @@ -69231,7 +69222,7 @@ OMIM mapping confirmed by DO. [SN]. A disease of anatomical entity that is located_in endocrine glands which secretes a type of hormone directly into the bloodstream to regulate the body. - + url:http://en.wikipedia.org/wiki/Endocrine_system @@ -69258,7 +69249,7 @@ OMIM mapping confirmed by DO. [SN]. A nephritis that causes inflammation of the glomeruli located_in kidney. - + url:http://en.wikipedia.org/wiki/Glomerulonephritis sn:IEDB @@ -69288,7 +69279,7 @@ OMIM mapping confirmed by DO. [SN]. A cell type cancer that has_material_basis_in abnormally proliferating cells derives_from germ cells. - + url:http://en.wikipedia.org/wiki/Germ_cell_tumor @@ -69404,7 +69395,7 @@ OMIM mapping confirmed by DO. [SN]. An artery disease that is characterized by plaque building up along the inner walls of the arteries of the heart resulting in a narrowing of the arteries and a reduced blood supply to the cardiac muscles. - + url:http://en.wikipedia.org/wiki/Coronary_heart_disease @@ -69428,7 +69419,7 @@ OMIM mapping confirmed by DO. [SN]. A skin cancer that is located_in tissues of the skin and develops from epithelial cells. - + url:http://www.cancer.gov/cancertopics/types/skin @@ -69487,7 +69478,7 @@ OMIM mapping confirmed by DO. [SN]. A hepatobiliary system cancer that is located_in the liver. - + url:http://en.wikipedia.org/wiki/Liver @@ -69526,7 +69517,7 @@ OMIM mapping confirmed by DO. [SN]. An integumentary system disease that is located_in skin. - + url:http://en.wikipedia.org/wiki/Skin_disease @@ -69551,7 +69542,7 @@ OMIM mapping confirmed by DO. [SN]. A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism. - + url:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041577/ @@ -69576,7 +69567,7 @@ OMIM mapping confirmed by DO. [SN]. A gastrointestinal system disease that is located_in the mouth. - + url:http://en.wikipedia.org/wiki/Oral_and_maxillofacial_pathology @@ -69606,7 +69597,7 @@ OMIM mapping confirmed by DO. [SN]. A heart disease involving one or more of the four valves of the heart (the aortic and mitral valves on the left and the pulmonary and tricuspid valves on the right). - + url:http://en.wikipedia.org/wiki/Heart_valve_disease @@ -69666,7 +69657,7 @@ OMIM mapping confirmed by DO. [SN]. A disease of mental health that involves physical symptoms suggesting a physical illness where the biological or medical cause of the symptoms is indeterminate. - + url:http://en.wikipedia.org/wiki/Somatoform_disorder @@ -69753,7 +69744,7 @@ OMIM mapping confirmed by DO. [SN]. A gastrointestinal system cancer that is located_in the esophagus. - + url:http://cancergenome.nih.gov/cancersselected/stomach-esophagealcancer url:http://en.wikipedia.org/wiki/Esophagus @@ -69779,7 +69770,7 @@ OMIM mapping confirmed by DO. [SN]. A disease of mental health that involves disruption of sleep patterns. - + url:http://en.wikipedia.org/wiki/Sleep_disorder @@ -69834,7 +69825,7 @@ OMIM mapping confirmed by DO. [SN]. A urinary system disease that is located_in the kidney. - + url:http://www.nlm.nih.gov/medlineplus/kidneydiseases.html @@ -69863,7 +69854,7 @@ OMIM mapping confirmed by DO. [SN]. An eye and adnexa disease that is located_in the eye. - + url:http://en.wikipedia.org/wiki/Eye_disease @@ -69888,7 +69879,7 @@ OMIM mapping confirmed by DO. [SN]. A sarcoma and hematologic cancer that derives_from follicular lymphoma. - + url:http://www.springerlink.com/content/h9wrn7p72x26q035/ @@ -69941,7 +69932,7 @@ OMIM mapping confirmed by DO. [SN]. A disease that has_material_basis_in genetic variations in the human genome. - + url:http://ghr.nlm.nih.gov/ @@ -69975,7 +69966,7 @@ OMIM mapping confirmed by DO. [SN]. A cell type benign neoplasm that is composed_of epithelial tissue in which tumor cells form glands or glandlike structures. - + url:http://coloncancer.about.com/od/glossaries/g/Adenoma.htm url:http://en.wikipedia.org/wiki/Adenoma @@ -70002,7 +69993,7 @@ OMIM mapping confirmed by DO. [SN]. A disease that manifests in a defined anatomical structure. - + url:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=anatomic @@ -70035,8 +70026,8 @@ OMIM mapping confirmed by DO. [SN]. An immune system disease that is located_in the lymphatic system. - - + + url:http://en.wikipedia.org/wiki/Lymphatic_disease url:http://www.nlm.nih.gov/medlineplus/lymphaticdiseases.html @@ -70061,7 +70052,7 @@ OMIM mapping confirmed by DO. [SN]. A leukemia that occurs in children. - + url:http://www.nlm.nih.gov/medlineplus/leukemiachildhood.html @@ -70089,8 +70080,8 @@ OMIM mapping confirmed by DO. [SN]. A lens disease characterized by clouding of the lens inside the eye which leads to a decrease in vision. - - + + url:http://en.wikipedia.org/wiki/Cataract url:https://www.ncbi.nlm.nih.gov/pubmed/10414631 @@ -70122,8 +70113,8 @@ OMIM mapping confirmed by DO. [SN]. A lower respiratory tract disease in which the function of the lungs is adversely affected by narrowing or blockage of the airways resulting in poor air flow, a loss of elasticity in the lungs that produces a decrease in the total volume of air that the lungs are able to hold, and clotting, scarring, or inflammation of the blood vessels that affect the ability of the lungs to take up oxygen and to release carbon dioxide. - - + + url:http://www.niehs.nih.gov/health/topics/conditions/lung-disease/index.cfm url:http://www.nlm.nih.gov/medlineplus/ency/article/000066.htm @@ -70166,8 +70157,8 @@ OMIM mapping confirmed by DO. [SN]. A myeloid leukemia that is characterized by over production of white blood cells. - - + + url:http://www.cancer.gov/dictionary?CdrID=46755 @@ -70207,7 +70198,7 @@ OMIM mapping confirmed by DO. [SN]. A leukemia that is located_in myeloid tissue. - + url:http://en.wikipedia.org/wiki/Myeloid_leukemia @@ -70236,7 +70227,7 @@ OMIM mapping confirmed by DO. [SN]. A carcinoma that is an early development defined by the absence of invasion of surrounding tissues. - + url:http://en.wikipedia.org/wiki/Carcinoma_in_situ @@ -70312,9 +70303,9 @@ OMIM mapping confirmed by DO. [SN]. A myeloid leukemia that is characterized by the rapid growth of abnormal white blood cells that accumulate in the bone marrow and interfere with the production of normal blood cells. - - - + + + url:http://cancergenome.nih.gov/cancersselected/acutemyeloidleukemia url:http://en.wikipedia.org/wiki/Acute_myeloid_leukemia url:http://www.cancer.gov/dictionary?cdrid=44363 @@ -70352,8 +70343,8 @@ OMIM mapping confirmed by DO. [SN]. A large intestine cancer that is located_in the colon and/or located_in the rectum. - - + + url:http://www.cancer.gov/dictionary?CdrID=444983 @@ -70419,8 +70410,8 @@ OMIM mapping confirmed by DO. [SN]. A acute leukemia that is characterized by over production of lymphoblasts. - - + + url:http://www.cancer.gov/dictionary?CdrID=46332 @@ -80924,39 +80915,26 @@ The building envelope provides resistance to air, water, heat, light, and noise - - - - - - - - - - - - - + An ice is an environmental material which is either frozen or which is maintained in a solid state by gravitational forces or pressure. Note that ice may be formed at very high temperatures, due to gravitational effects and/or pressure. ice + + + + + + + + + + + - - - - - - - - - - - - - + https://github.com/EnvironmentOntology/envo/issues/900 @@ -83205,6 +83183,20 @@ The building envelope provides resistance to air, water, heat, light, and noise + + + + + + + + + + + + + + A land use process during which materials of economic value are extracted from a planet, usually from an orebody, lode, vein, seam, reef or placer deposit. mining @@ -84208,10 +84200,23 @@ The building envelope provides resistance to air, water, heat, light, and noise + + + + + + + + + + + + + A surface layer which is part of an ocean or sea. - - - + + + 2019-03-06T01:22:01Z envoMarine @@ -84228,7 +84233,7 @@ Sea surface layer is also used to refer to the surfaces of oceans. A hydroform which is maintained by a continuous, directed movement of water, generated by disequilibria in a water mass. - + 2019-03-19T16:31:41Z Depth contours, shoreline configurations and interaction with other currents influence a current's direction and strength. water current @@ -84258,7 +84263,7 @@ Sea surface layer is also used to refer to the surfaces of oceans. A layer which is part of a cryosphere. - + 2019-04-09T13:05:25Z envoPolar cryospheric layer @@ -84288,7 +84293,7 @@ Sea surface layer is also used to refer to the surfaces of oceans. Permafrost which contains inclusions of water-based ice. - + 2019-04-09T13:45:40Z ice-bearing permafrost @@ -84319,7 +84324,7 @@ Sea surface layer is also used to refer to the surfaces of oceans. A material accumulation process during which the mass of snow on a surface increases. - + 2019-04-24T18:29:18Z http://sweetontology.net/phenCryo/Accumulation This term is used both as a process and as an amount of mass added. Semantically speaking these are two distinct concepts (e.g., accumulation results in accumulation_amount of ice or snow gain), though accumulation_amount would more likely be an attribute. @@ -84365,7 +84370,7 @@ Some definitions include additional discussion of the the physics involved which A material accumulation process during which ice forms in an environmental material or an existing accumulation of ice increases in mass. - + 2019-04-24T18:48:53Z http://sweetontology.net/phenCryo/Accumulation ice accumulation process @@ -84412,7 +84417,7 @@ Some definitions include additional discussion of the the physics involved which A material accumulation process during which a accumulation of snow and ice forms or increases in mass. - + 2019-04-24T18:59:45Z http://sweetontology.net/phenCryo/Accumulation snow and ice accumulation process @@ -84479,7 +84484,7 @@ Some definitions include additional discussion of the the physics involved which A object which is composed primarily of water-based snow and ice. - + 2019-04-24T19:08:03Z http://sweetontology.net/phenCryo/Accumulation mass of ice and snow @@ -84513,7 +84518,7 @@ Some definitions include additional discussion of the the physics involved which A process during which microscopic solid particulates are formed from liquid materials in an atmosphere. - + 2019-05-30T21:07:51Z atmospheric formation of a solid aerosol formation of a solid aerosol in an atmosphere @@ -84553,7 +84558,7 @@ Some definitions include additional discussion of the the physics involved which That part of an atmosphere which is composed of gaseous material. - + 2019-06-02T07:52:47Z gaseous part of an atmosphere @@ -84597,7 +84602,7 @@ Some definitions include additional discussion of the the physics involved which A solid material which does not have a regularly organised internal structure. - + 2019-06-02T11:07:47Z amorphous solid @@ -84627,7 +84632,7 @@ Some definitions include additional discussion of the the physics involved which An aerosol that is suspended in an atmosphere. - + 2019-06-03T12:24:09Z atmospheric aerosol @@ -84663,8 +84668,8 @@ Some definitions include additional discussion of the the physics involved which A material transformation process during which solid or liquid particles form and are suspended in a mass of air, thus creating an aerosol. - - 2019-06-24T13:43:29Z + + 2019-06-24T13:43:29Z aerosol formation process @@ -84693,9 +84698,22 @@ Some definitions include additional discussion of the the physics involved which + + + + + + + + + + + + + A surface layer which is composed primarily of some liquid or gas. - - 2019-08-20T08:28:42Z + + 2019-08-20T08:28:42Z fluid surface layer @@ -84724,9 +84742,22 @@ Some definitions include additional discussion of the the physics involved which + + + + + + + + + + + + + A surface layer which separates two portions of fluid with respect to either 1) a discontinuity of some fluid property or 2) some derivative of one of these properties in a direction normal to the interface. - - 2019-07-22T17:29:44Z + + 2019-07-22T17:29:44Z fluid interface layer @@ -84774,8 +84805,8 @@ Some definitions include additional discussion of the the physics involved which A layer which is composed primarily of some fluid. - - 2019-07-22T17:35:08Z + + 2019-07-22T17:35:08Z fluid layer @@ -84786,8 +84817,8 @@ Some definitions include additional discussion of the the physics involved which A fluid interface which separates two fluid masses with differing properties. - - 2019-07-22T17:43:32Z + + 2019-07-22T17:43:32Z fluid front @@ -84824,8 +84855,8 @@ Some definitions include additional discussion of the the physics involved which A fluid front which is composed primarily of gaseous material and separates at least two gaseous masses. - - 2019-07-22T17:50:08Z + + 2019-07-22T17:50:08Z gaseous front @@ -84871,8 +84902,8 @@ Some definitions include additional discussion of the the physics involved which A gaseous front which separates two masses of air with different densities and is a principal cause of meteorological phenomena. - - 2019-07-22T17:57:21Z + + 2019-07-22T17:57:21Z meteorological front envoAtmo This class refers to Earth's weather fronts. Other forms, not composed of air, are present on other planets and can be created on request. Note: "Since the temperature distribution is the most important regulator of atmospheric density, a front almost invariably separates air masses of different temperature. Along with the basic density criterion and the common temperature criterion, many other features may distinguish a front, such as a pressure trough, a change in wind direction, a moisture discontinuity, and certain characteristic cloud and precipitation forms." @@ -84916,8 +84947,8 @@ Some definitions include additional discussion of the the physics involved which An object which is composed of a continuous mass of air. - - 2019-08-20T07:54:32Z + + 2019-08-20T07:54:32Z envoAtmo air mass @@ -84946,8 +84977,8 @@ Some definitions include additional discussion of the the physics involved which A fluid surface layer which is composed primarily of some gaseous material. - - 2019-08-20T08:30:01Z + + 2019-08-20T08:30:01Z gaseous surface layer @@ -84958,8 +84989,8 @@ Some definitions include additional discussion of the the physics involved which A layer which separates two portions of environmental material which possess 1) differing compositions, 2) a discontinuity of some property, or 3) some derivative of some property in a direction normal to the interface. - - 2019-08-20T09:28:10Z + + 2019-08-20T09:28:10Z interface layer @@ -84987,8 +85018,8 @@ Some definitions include additional discussion of the the physics involved which An object which is composed primarily of an environmental material - - 2019-08-20T09:38:29Z + + 2019-08-20T09:38:29Z This class and its subclasses refer to objects that are discrete accumulations of environmental materials, generally primarily composed of one or a few main material types. mass of environmental material @@ -85017,8 +85048,8 @@ Some definitions include additional discussion of the the physics involved which An mass of environmental material which is composed primarily of a solid environmental material - - 2019-08-20T09:41:27Z + + 2019-08-20T09:41:27Z This class and its subclasses refer to objects that are discrete accumulations of environmental materials, generally primarily composed of one or a few main material types. mass of solid material @@ -85061,8 +85092,8 @@ Some definitions include additional discussion of the the physics involved which An object which is composed primarily of a fluid. - - 2019-08-20T09:42:35Z + + 2019-08-20T09:42:35Z fluid mass This class and its subclasses refer to objects that are discrete accumulations of environmental materials, generally primarily composed of one or a few main material types. mass of fluid @@ -85092,8 +85123,8 @@ Some definitions include additional discussion of the the physics involved which An object which is composed primarily of a gas. - - 2019-08-20T09:44:01Z + + 2019-08-20T09:44:01Z gaseous mass This class and its subclasses refer to objects that are discrete accumulations of environmental materials, generally primarily composed of one or a few main material types. mass of gas @@ -85123,8 +85154,8 @@ Some definitions include additional discussion of the the physics involved which An object which is composed primarily of a liquid. - - 2019-08-20T09:45:03Z + + 2019-08-20T09:45:03Z liquid mass This class and its subclasses refer to objects that are discrete accumulations of environmental materials, generally primarily composed of one or a few main material types. mass of liquid @@ -85149,8 +85180,8 @@ Some definitions include additional discussion of the the physics involved which An mass of environmental materials which has appreciable quantities of several individual materials, such that the removal of one would convert the mass into a different entity. - - 2019-08-20T09:47:10Z + + 2019-08-20T09:47:10Z mass of compounded environmental materials @@ -85161,8 +85192,8 @@ Some definitions include additional discussion of the the physics involved which A weather front which separates air masses of tropical and polar origin. - - 2019-08-20T13:46:42Z + + 2019-08-20T13:46:42Z envoAtmo envoPolar polar front @@ -85198,8 +85229,8 @@ Some definitions include additional discussion of the the physics involved which An environment which has a climate with continually high temperatures and with considerable precipitation, at least during part of the year. - - 2019-08-20T13:58:38Z + + 2019-08-20T13:58:38Z tropical environment @@ -85233,8 +85264,8 @@ Some definitions include additional discussion of the the physics involved which An environment which has a climate with warm temperatures and with meagre precipitation. - - 2019-08-20T14:50:35Z + + 2019-08-20T14:50:35Z subtropical environment @@ -85268,8 +85299,8 @@ Some definitions include additional discussion of the the physics involved which An environment which is located in a part of an astronomical body subject to polar climatic conditions. - - 2019-08-20T14:53:26Z + + 2019-08-20T14:53:26Z polar environment @@ -85303,8 +85334,8 @@ Some definitions include additional discussion of the the physics involved which An environment which is located in a part of an astronomical body subject to subpolar climatic conditions. - - 2019-08-20T16:37:32Z + + 2019-08-20T16:37:32Z subpolar environment @@ -85338,8 +85369,8 @@ Some definitions include additional discussion of the the physics involved which An environment which is located in a part of an astronomical body subject to temperate climatic conditions. - - 2019-08-20T16:41:52Z + + 2019-08-20T16:41:52Z temperate environment @@ -85362,8 +85393,8 @@ Some definitions include additional discussion of the the physics involved which An advective transport process during which a fluid moves. - - 2019-09-05T05:47:26Z + + 2019-09-05T05:47:26Z mass fluid flow @@ -85374,10 +85405,10 @@ Some definitions include additional discussion of the the physics involved which A wind storm during which strong gusts of wind occur, transporting atmospheric gas in a linear fashion. - - - - 2019-09-05T06:04:47Z + + + + 2019-09-05T06:04:47Z hurricane of the prairie plough winds thundergust @@ -85397,8 +85428,8 @@ Some definitions include additional discussion of the the physics involved which A process during which the ability of a material entity to maintain its internal organisation fails, resulting in deformation and a breakdown of that organisation. - - 2019-10-07T10:08:24Z + + 2019-10-07T10:08:24Z This is a very general concept, and should likely be elevated to OBO Core rather than held in ENVO. structural collapse process @@ -85439,8 +85470,8 @@ Some definitions include additional discussion of the the physics involved which An environmental zone which includes those regions of an astronomical body which are not exposed to its atmosphere or space. - - 2019-10-07T14:22:38Z + + 2019-10-07T14:22:38Z subsurface zone of an astronomical body @@ -85451,8 +85482,8 @@ Some definitions include additional discussion of the the physics involved which An ecosystem in which the composition, structure, and function of resident ecological assemblages are primarily determined by a desert. - - 2019-10-17T08:21:08Z + + 2019-10-17T08:21:08Z desert ecosystem @@ -85480,8 +85511,8 @@ Some definitions include additional discussion of the the physics involved which A solid astronomical body part which is part of the landmass of that body. - - 2019-10-17T08:27:17Z + + 2019-10-17T08:27:17Z part of a landmass @@ -85492,8 +85523,8 @@ Some definitions include additional discussion of the the physics involved which A large continuous area of land, either surrounded by sea or contiguous with another landmass. - - 2019-10-17T08:31:26Z + + 2019-10-17T08:31:26Z landmass @@ -85543,8 +85574,8 @@ Some definitions include additional discussion of the the physics involved which A part of an astronomical body which is composed of a continuous medium bearing liquid, gaseous, and solid material in variable quantities. - - 2019-10-17T08:36:00Z + + 2019-10-17T08:36:00Z compound astronomical body part @@ -85562,8 +85593,8 @@ Some definitions include additional discussion of the the physics involved which A surface layer of an astronomical body which is primarily composed of solid material and is not covered by oceans or other bodies of water. - - 2019-10-21T10:42:26Z + + 2019-10-21T10:42:26Z land @@ -85579,8 +85610,8 @@ Some definitions include additional discussion of the the physics involved which - - 2019-10-21T11:05:45Z + + 2019-10-21T11:05:45Z aquatic ecosystem @@ -85591,8 +85622,8 @@ Some definitions include additional discussion of the the physics involved which - - 2019-10-21T11:06:11Z + + 2019-10-21T11:06:11Z marine ecosystem @@ -85602,8 +85633,8 @@ Some definitions include additional discussion of the the physics involved which - - 2019-10-21T11:09:58Z + + 2019-10-21T11:09:58Z terrestrial ecosystem @@ -85615,8 +85646,8 @@ Some definitions include additional discussion of the the physics involved which A broadleaf forest which is subject to tropical climate conditions. - - 2019-10-21T11:38:45Z + + 2019-10-21T11:38:45Z tropical broadleaf forest @@ -85628,8 +85659,8 @@ Some definitions include additional discussion of the the physics involved which A broadleaf forest which is subject to temperate climate conditions. - - 2019-10-21T11:42:38Z + + 2019-10-21T11:42:38Z temperate broadleaf forest @@ -85657,8 +85688,8 @@ Some definitions include additional discussion of the the physics involved which An environmental process either driven by or primarily impacting the parts or emergent properties of an ecosystem. - - 2019-10-21T11:52:55Z + + 2019-10-21T11:52:55Z ecosystem process @@ -85681,8 +85712,8 @@ Some definitions include additional discussion of the the physics involved which A mixed forest which is subject to temperate climatic conditions. - - 2019-10-27T15:52:50Z + + 2019-10-27T15:52:50Z temperate mixed forest @@ -85705,8 +85736,8 @@ Some definitions include additional discussion of the the physics involved which A mixed forest which is subject to tropical climatic conditions. - - 2019-10-27T16:02:01Z + + 2019-10-27T16:02:01Z tropical mixed forest @@ -85729,8 +85760,8 @@ Some definitions include additional discussion of the the physics involved which A forest ecosystem which is subject to tropical climate conditions. - - 2019-10-27T16:43:20Z + + 2019-10-27T16:43:20Z This class is primarily to be populated by inference. tropical forest @@ -85754,8 +85785,8 @@ Some definitions include additional discussion of the the physics involved which A forest ecosystem which is subject to subtropical climate conditions. - - 2019-10-27T16:45:16Z + + 2019-10-27T16:45:16Z This class is primarily to be populated by inference. subtropical forest @@ -85779,8 +85810,8 @@ Some definitions include additional discussion of the the physics involved which A forest ecosystem which is subject to temperate climate conditions. - - 2019-10-27T16:46:49Z + + 2019-10-27T16:46:49Z This class is primarily to be populated by inference. temperate forest @@ -85804,8 +85835,8 @@ Some definitions include additional discussion of the the physics involved which A grassland ecosystem which is subject to tropical climatic conditions. - - 2019-10-27T16:58:09Z + + 2019-10-27T16:58:09Z tropical grassland @@ -85828,8 +85859,8 @@ Some definitions include additional discussion of the the physics involved which A grassland which is subject to subtropical climatic conditions. - - 2019-10-27T17:00:35Z + + 2019-10-27T17:00:35Z subtropical grassland @@ -85839,8 +85870,8 @@ Some definitions include additional discussion of the the physics involved which - - 2019-10-27T17:00:35Z + + 2019-10-27T17:00:35Z temperate grassland @@ -85851,8 +85882,8 @@ Some definitions include additional discussion of the the physics involved which A material entity which has been assembled through the intentional, instinctual, or deliberately programmed efforts of an organism or machine. - - 2019-10-29T14:50:34Z + + 2019-10-29T14:50:34Z construction @@ -85890,8 +85921,8 @@ Some definitions include additional discussion of the the physics involved which An object which is formed as a result of one or more biological processes and is composed primarily of organic material. - - 2019-10-29T15:02:58Z + + 2019-10-29T15:02:58Z organic object @@ -85914,8 +85945,8 @@ Some definitions include additional discussion of the the physics involved which A biome which is subject to tropical climatic conditions. - - 2019-11-06T15:56:17Z + + 2019-11-06T15:56:17Z tropical biome @@ -85938,8 +85969,8 @@ Some definitions include additional discussion of the the physics involved which A biome which is subject to temperate climatic conditions. - - 2019-11-06T15:57:04Z + + 2019-11-06T15:57:04Z temperate biome @@ -85962,8 +85993,8 @@ Some definitions include additional discussion of the the physics involved which A biome which is subject to subtropical climatic conditions. - - 2019-11-06T15:57:36Z + + 2019-11-06T15:57:36Z subtropical biome @@ -85986,8 +86017,8 @@ Some definitions include additional discussion of the the physics involved which A biome which is subject to subpolar climatic conditions. - - 2019-11-06T15:58:56Z + + 2019-11-06T15:58:56Z subpolar biome @@ -86015,8 +86046,8 @@ Some definitions include additional discussion of the the physics involved which A biome which is subject to alpine altitudinal conditions. - - 2019-11-06T15:59:35Z + + 2019-11-06T15:59:35Z alpine biome @@ -86044,8 +86075,8 @@ Some definitions include additional discussion of the the physics involved which A biome which is subject to montane altitudinal conditions. - - 2019-11-06T16:00:33Z + + 2019-11-06T16:00:33Z montane biome @@ -86073,8 +86104,8 @@ Some definitions include additional discussion of the the physics involved which A biome which is subject to arid environmental conditions. - - 2019-11-06T16:06:47Z + + 2019-11-06T16:06:47Z arid biome @@ -86085,8 +86116,8 @@ Some definitions include additional discussion of the the physics involved which A process during which one entity loses energy to another entity. - - 2020-02-13T13:34:28Z + + 2020-02-13T13:34:28Z energy transfer process @@ -86114,8 +86145,8 @@ Some definitions include additional discussion of the the physics involved which A material accumulation process during which the volume of liquid entity increases. - - 2020-05-18T14:39:20Z + + 2020-05-18T14:39:20Z liquid accumulation process @@ -86126,8 +86157,8 @@ Some definitions include additional discussion of the the physics involved which An atmospheric wind which 1) has an increased rate relative to other winds in the same region and 2) is followed by a lull. - - 2020-05-19T21:47:51Z + + 2020-05-19T21:47:51Z gust According to U.S. weather observing practice, gusts are reported when the peak wind speed reaches at least 16 knots and the variation in wind speed between the peaks and lulls is at least 9 knots. The duration of a gust is usually less than 20 seconds. wind gust @@ -86190,8 +86221,8 @@ Some definitions include additional discussion of the the physics involved which The concentration of carbon dioxide when measured in air that is part of an atmosphere. - - 2020-05-19T22:51:38Z + + 2020-05-19T22:51:38Z envoAtmo envoNceas concentration of carbon dioxide in an atmosphere @@ -86204,8 +86235,8 @@ Some definitions include additional discussion of the the physics involved which A landform which occurs on the surface of an astronomical body. - - 2021-05-15T09:16:23Z + + 2021-05-15T09:16:23Z geographic feature The usage of "surface" here aligns with that of planetary surface: in contact with the atmosphere or space. The extent of the "surface" can vary. For rocky planets like Earth, astrogeologists consider the crust as the surface. surface landform @@ -86218,8 +86249,8 @@ Some definitions include additional discussion of the the physics involved which A solid astronomical body part which has been formed from and is composed primarily of the matter of that astronomical body. - - 2021-05-15T09:40:37Z + + 2021-05-15T09:40:37Z Landforms may be natural or anthropogenic. This term has often has loose usage when referencing entities which are either subterranean or submerged below water bodies. In some cases, oceans themselves are considered landforms. Here, we have provided subclasses to resolve this ambiguity, but place oceans and other water bodies elsewhere.In later revisions, this hiearchy is likely to be reordered based on the formation processes of the entities within it. landform @@ -86243,7 +86274,7 @@ Some definitions include additional discussion of the the physics involved which A disposition of a material entity which is realised when it is saturated with liquid water. - + water-holding capacity @@ -86368,7 +86399,7 @@ Some definitions include additional discussion of the the physics involved which A physical quality of a process which is characteristic of processes that transport material within a volume due to the combined effects of material property heterogeneity and body forces across that volume. - + convective @@ -86385,7 +86416,7 @@ Some definitions include additional discussion of the the physics involved which A physical quality of a process which is characteristic of process that transport material without, themselves, changing the qualities of those materials or the processes that are unfolding within them. - + advective @@ -86432,7 +86463,7 @@ Some definitions include additional discussion of the the physics involved which A combustible black or brownish-black sedimentary rock usually occurring in rock strata in layers or veins called coal beds or coal seams. - + coal @@ -86485,7 +86516,7 @@ Some definitions include additional discussion of the the physics involved which - + iron mine @@ -86532,7 +86563,7 @@ Some definitions include additional discussion of the the physics involved which - + uranium mine @@ -86544,7 +86575,7 @@ Some definitions include additional discussion of the the physics involved which a type of rock that contains sufficient minerals with important elements including metals that can be economically extracted from the rock. - + ore @@ -86573,7 +86604,7 @@ Some definitions include additional discussion of the the physics involved which Ore which contains uranium. - + The primary uranium ore mineral is uraninite uranium ore @@ -86601,7 +86632,7 @@ Some definitions include additional discussion of the the physics involved which - + iron ore @@ -86628,7 +86659,7 @@ Some definitions include additional discussion of the the physics involved which - + gold ore @@ -86655,7 +86686,7 @@ Some definitions include additional discussion of the the physics involved which - + platinum ore @@ -86683,7 +86714,7 @@ Some definitions include additional discussion of the the physics involved which Dust which is derived from coal. - + coal dust @@ -86712,7 +86743,7 @@ Some definitions include additional discussion of the the physics involved which Dust which is derived from mineral material. - + mineral dust @@ -86746,7 +86777,7 @@ Some definitions include additional discussion of the the physics involved which Dust which is composed primarily of some metallic material. - + metallic dust @@ -86773,7 +86804,7 @@ Some definitions include additional discussion of the the physics involved which - + cement dust @@ -86801,7 +86832,7 @@ Some definitions include additional discussion of the the physics involved which Dust which is derived from clay material. - + clay dust @@ -86828,7 +86859,7 @@ Some definitions include additional discussion of the the physics involved which - + dust from plant parts @@ -86839,7 +86870,7 @@ Some definitions include additional discussion of the the physics involved which A surface mine that utilizes a technique of extracting rock or minerals from the earth by their removal from an open pit or borrow. - + open-pit mine @@ -86872,7 +86903,7 @@ Some definitions include additional discussion of the the physics involved which A human construction which is used to initiate and control a fission nuclear chain reaction or nuclear fusion reactions. - + nuclear reactor @@ -86889,7 +86920,7 @@ Some definitions include additional discussion of the the physics involved which A nuclear reactor which is used as a source of power. - + power reactor nuclear power reactor @@ -88326,8 +88357,8 @@ Definitions of Cryosphere come from several glossaries including: Any material containing unstable atoms that emit ionizing radiation as it decays. - - 2020-08-03T18:32:42Z + + 2020-08-03T18:32:42Z radioactive material @@ -88344,7 +88375,7 @@ Definitions of Cryosphere come from several glossaries including: A water ice crystal which is constituted by water molecules aligned in a hexagonal array. - + snowflake snow crystal @@ -88520,8 +88551,8 @@ consider revising 'pond' semantics The concentration of carbon dioxide when measured in soil. - - 2019-03-14T21:13:30Z + + 2019-03-14T21:13:30Z envoNceas concentration of carbon dioxide in soil @@ -88570,8 +88601,8 @@ consider revising 'pond' semantics The concentration of carbon dioxide when measured in air. - - 2019-03-14T21:24:04Z + + 2019-03-14T21:24:04Z envoNceas concentration of carbon dioxide in air @@ -88620,8 +88651,8 @@ consider revising 'pond' semantics The concentration of carbon dioxide when measured in seawater. - - 2019-03-14T21:35:30Z + + 2019-03-14T21:35:30Z envoNceas concentration of carbon dioxide in seawater @@ -88639,8 +88670,8 @@ consider revising 'pond' semantics Organic material in soil, which consists of plant and animal residues at various stages of decomposition, cells and tissues of soil organisms, and substances synthesized by soil organisms. - - 2019-04-05T00:53:06Z + + 2019-04-05T00:53:06Z envoNceas soil organic matter @@ -88677,8 +88708,8 @@ consider revising 'pond' semantics A surface layer which is composed primarily of soil. - - 2019-04-12T17:35:13Z + + 2019-04-12T17:35:13Z envoNceas soil surface layer @@ -88707,7 +88738,7 @@ consider revising 'pond' semantics A layer that is composed primarily of soil. - + soil layer @@ -88735,8 +88766,8 @@ consider revising 'pond' semantics Texture which inheres in soil. - - 2021-12-26T21:49:12Z + + 2021-12-26T21:49:12Z soil texture @@ -88753,8 +88784,8 @@ consider revising 'pond' semantics Water-holding capacity which inheres in some soil. - - + + soil water-holding capacity water-holding capacity of soil @@ -89502,7 +89533,7 @@ consider revising 'pond' semantics A disposition which is realized during the execution of work, the emission of heat, or the possession of mass. - + 2018-11-03T20:22:18Z Consider replacing with PATO class; note that PATO class is not a disposition. This should likely go into OBO Core and also have a physicist look at it. energy @@ -89527,7 +89558,7 @@ consider revising 'pond' semantics Energy which is realised through motion. - + 2018-11-03T20:25:57Z kinetic energy @@ -89566,8 +89597,8 @@ consider revising 'pond' semantics Energy which is the sum of 1) kinetic energy and 2) potential energy. - - + + 2018-11-03T20:26:08Z mixed potential and kinetic energy @@ -89609,8 +89640,8 @@ consider revising 'pond' semantics Kinetic energy which is realised through the microscopic motion of particles. - - + + 2018-11-03T20:30:20Z A form of disordered mechanical energy. thermal energy @@ -89635,8 +89666,8 @@ consider revising 'pond' semantics - - + + 2018-11-03T20:48:18Z stellar radiation energy @@ -100958,12 +100989,7 @@ consider revising 'pond' semantics - - - - - - + @@ -100988,16 +101014,15 @@ consider revising 'pond' semantics GO:0005319 lipid transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -101077,12 +101102,7 @@ consider revising 'pond' semantics - - - - - - + @@ -101103,16 +101123,15 @@ consider revising 'pond' semantics GO:0005326 neurotransmitter transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -101358,44 +101377,32 @@ consider revising 'pond' semantics - - - - - - - - - - - - + + A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer + + + + + + + + - - - - - - + PMID:12382326 - - - - - - + PMID:12382326 @@ -109831,6 +109838,26 @@ consider revising 'pond' semantics + + + + + + + + + + + + + + + + + + + + @@ -109880,6 +109907,26 @@ consider revising 'pond' semantics + + + + + + + + + + + + + + + + + + + + @@ -110012,12 +110059,7 @@ consider revising 'pond' semantics - - - - - - + Enables the transfer of a protein from one side of a membrane to the other. GO:0015266 GO:0015463 @@ -110046,16 +110088,15 @@ consider revising 'pond' semantics GO:0008320 protein transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -120394,12 +120435,7 @@ consider revising 'pond' semantics - - - - - - + @@ -120414,16 +120450,15 @@ consider revising 'pond' semantics GO:0015075 monoatomic ion transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -120713,12 +120748,7 @@ consider revising 'pond' semantics - - - - - - + @@ -120741,16 +120771,15 @@ consider revising 'pond' semantics GO:0015114 phosphate ion transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -120783,12 +120812,7 @@ consider revising 'pond' semantics - - - - - - + @@ -120812,16 +120836,15 @@ consider revising 'pond' semantics GO:0015116 sulfate transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -120865,12 +120888,7 @@ consider revising 'pond' semantics - - - - - - + @@ -120882,16 +120900,15 @@ consider revising 'pond' semantics GO:0015123 acetate transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -121065,12 +121082,7 @@ consider revising 'pond' semantics - - - - - - + @@ -121085,16 +121097,15 @@ consider revising 'pond' semantics GO:0015144 carbohydrate transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -121165,12 +121176,7 @@ consider revising 'pond' semantics - - - - - - + @@ -121184,16 +121190,15 @@ consider revising 'pond' semantics GO:0015149 hexose transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -121277,12 +121282,7 @@ consider revising 'pond' semantics - - - - - - + @@ -121346,16 +121346,15 @@ consider revising 'pond' semantics GO:0015171 amino acid transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -207026,12 +207025,7 @@ consider revising 'pond' semantics - - - - - - + @@ -207046,16 +207040,15 @@ consider revising 'pond' semantics GO:1901505 carbohydrate derivative transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -257566,7 +257559,7 @@ clustering algorithm. A change of place or position of part of an organism that does not involve the entire organism [NBO:SMAC] - 2011-04-14T01:03:39Z + 2011-04-14T01:03:39Z George Gkoutos stationary movement behavior_ontology @@ -257580,7 +257573,7 @@ clustering algorithm. The act of moving any of the tissues and hard structures surrounding the mouth other than teeth, jaws or filter structures [NBO:AC] - 2011-04-14T01:03:39Z + 2011-04-14T01:03:39Z George Gkoutos mouth part movement other moved mouth parts @@ -257595,7 +257588,7 @@ clustering algorithm. The act of repeated grinding, tearing, and or crushing with teeth or jaws [NBO:SMAC] - 2011-04-14T01:20:02Z + 2011-04-14T01:20:02Z George Gkoutos chew gnaw @@ -257611,7 +257604,7 @@ clustering algorithm. "The action, reaction, or performance of an organism in response to external or internal stimuli." [GO:GO\:0007610] - 2011-04-05T09:53:10Z + 2011-04-05T09:53:10Z George Gkoutos NBO:0000000 behavior @@ -257628,7 +257621,7 @@ clustering algorithm. "Movement behavior of the body or its parts." - 2011-04-05T02:08:47Z + 2011-04-05T02:08:47Z George Gkoutos behavior_ontology kinesthetic behavior @@ -257640,7 +257633,7 @@ clustering algorithm. - 2012-03-17T09:51:17Z + 2012-03-17T09:51:17Z gkoutos behavior_ontology jaw movement @@ -267031,7 +267024,7 @@ The following are NOT conclusions based on data: data themselves; results from p Details see tracker: https://sourceforge.net/p/obi/obi-terms/778/ Person: Chris Stoeckert, Jie Zheng OBIB, OBI - Biobank + Biobank collection of specimens @@ -270189,7 +270182,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure. - + 2009-02-15T08:11:41Z dendriform dendroid @@ -270212,7 +270205,7 @@ class labels for these objects. The resulting predictor can be used to attach cl - + george 2009-06-05T09:16:46Z quality @@ -270229,7 +270222,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality inhering in a bearer by virtue of the bearer's having an empty space or cavity within. - + 2009-09-18T02:19:20Z quality PATO:0002078 @@ -270250,7 +270243,7 @@ class labels for these objects. The resulting predictor can be used to attach cl An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for basic dyes under specific pH conditions. - + 2009-10-05T12:05:23Z quality PATO:0002094 @@ -270273,7 +270266,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality inhering in a bearer by virtue of the bearer's processing the form of a thin plate sheet or layer. - + 2009-10-06T04:37:14Z quality PATO:0002124 @@ -270325,7 +270318,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality inhering in a bearer by virtue of its constitution. - + 2010-03-15T04:35:27Z quality PATO:0002198 @@ -270346,7 +270339,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical. - + 2010-07-13T04:22:30Z quality PATO:0002226 @@ -270378,7 +270371,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality inhering in a bearer by virtue of the bearer's surface becoming more extended in a plane. - + 2010-08-16T03:59:34Z quality compressed @@ -270401,7 +270394,7 @@ class labels for these objects. The resulting predictor can be used to attach cl Texture quality inhering in a bearer by virtue of the bearer's being marked with one or more channels. - + 2010-09-01T10:27:48Z quality channeled @@ -270424,7 +270417,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A shape that inheres in a 3 dimensional entity. - + 2010-10-05T12:31:16Z quality PATO:0002266 @@ -270457,7 +270450,7 @@ class labels for these objects. The resulting predictor can be used to attach cl An elasticity which is relatively high. - + 2011-03-30T11:50:21Z quality PATO:0002287 @@ -270479,7 +270472,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A cylindrical shape that is hollow. - + 2011-06-08T06:33:50Z tube like tube-shaped @@ -270520,7 +270513,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality that has a value that is increased compared to normal or average. - + 2011-06-16T06:39:43Z quality PATO:0002300 @@ -270574,7 +270567,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality of a process that has a value that is increased compared to normal or average. - + 2011-06-16T06:53:08Z quality PATO:0002304 @@ -270607,7 +270600,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality of an object that has a value that is increased compared to normal or average. - + 2011-06-16T06:54:01Z quality PATO:0002305 @@ -270627,7 +270620,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a by virtue of the bearer's exhibiting a consistently sized and approximately round cross-section along its length, which is many times larger than its diameter. - + 2011-09-09T04:50:10Z quality PATO:0002309 @@ -270649,7 +270642,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt - + 2011-10-12T12:45:16Z Lamé curve quality @@ -270680,7 +270673,7 @@ class labels for these objects. The resulting predictor can be used to attach cl An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for acidic dyes under specific pH conditions. - + 2012-12-17T03:01:19Z eosinophilic quality @@ -270704,7 +270697,7 @@ class labels for these objects. The resulting predictor can be used to attach cl Pertaining to the individual parts making up an aggregate fruit like a many-lobed "berry," such as a raspberry. - + 2012-12-17T03:11:10Z quality PATO:0002422 @@ -270727,7 +270720,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen. - + 2013-09-15T11:34:15Z quality PATO:0002462 @@ -270748,7 +270741,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching. - + 2013-09-15T11:48:26Z quality PATO:0002468 @@ -270769,7 +270762,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented transversely relative to the long axis of the bearer. - + 2013-09-15T12:29:15Z quality PATO:0002478 @@ -270792,7 +270785,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A nucleate quality inhering in a bearer by virtue of the bearer's having one or more nucleus. - + 2013-10-21T05:44:34Z quality PATO:0002505 @@ -270814,7 +270807,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A structural quality inhering in the bearer by virtue of the bearer consisting of multiple structures lacking any physical connection to each other. - + 2014-12-12T08:43:17Z quality PATO:0010001 @@ -272396,12 +272389,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An anatomical entity that is or was part of a plant. rwalls 2010-11-15T11:41:38Z @@ -272413,15 +272401,14 @@ Classes for population already exist in IDO ('organism population', I Includes both material entities such as plant structures and immaterial entities such as plant anatomical spaces. CARO:0000000 'anatomical entity' is defined as: A part of a cellular organism that is either an immaterial entity or a material entity with granularity aboove the level of a protein complex. Or, a substance produced by a cellular organism with granularity above the level of a protein complex. Refers to BFO:0000004 'independent continuant'. plant anatomical entity + + + + - - - - - - + cjm @@ -278335,7 +278322,7 @@ Classes for population already exist in IDO ('organism population', I - + Planned exposure to radiation generated through a device or exposure to a source emitting ionising radiation 0000-0002-5111-7263 @@ -281118,24 +281105,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -281179,37 +281151,34 @@ Classes for population already exist in IDO ('organism population', I islet of Langerhans http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png + + + + + + + + + + + + - - - - - - + PMID:16417468 - - - - - - + PMID:16417468 - - - - - - + PMID:16417468 @@ -281517,12 +281486,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -281568,6 +281532,10 @@ Classes for population already exist in IDO ('organism population', I sympathetic nervous system http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png + + + + @@ -281577,12 +281545,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA MA ZFA-modified-from-isa @@ -281782,12 +281745,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -281800,24 +281758,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -281865,6 +281808,22 @@ Classes for population already exist in IDO ('organism population', I endocrine pancreas + + + + + + + + + + + + + + + + @@ -281874,12 +281833,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AAO FMA XAO @@ -281887,34 +281841,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + GO - - - - - - + GO - - - - - - + GO @@ -282125,12 +282064,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -282158,15 +282092,14 @@ Classes for population already exist in IDO ('organism population', I compound eye https://github.com/obophenotype/uberon/issues/457 + + + + - - - - - - + PMID:21062451 @@ -282248,12 +282181,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -282294,15 +282222,14 @@ Classes for population already exist in IDO ('organism population', I camera-type eye + + + + - - - - - - + definitional @@ -282414,7 +282341,7 @@ Classes for population already exist in IDO ('organism population', I An organ that is capable of transducing sensory stimulus to the nervous system. - + AEO:0000094 BSA:0000121 BTO:0000202 @@ -282740,12 +282667,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a respiratory airway. EMAPA:35877 FMA:265157 @@ -282768,15 +282690,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0000031 lamina propria of trachea + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -283000,7 +282921,7 @@ Classes for population already exist in IDO ('organism population', I A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer.[TAO] a smooth membrane consisting of a thin layer of cells which excrete serous fluid. Serous membranes line and enclose several body cavities, known as serous cavities, where they secrete a lubricating fluid which reduces friction from muscle movement. Serosa is not to be confused with adventitia, a connective tissue layer which binds together structures rather than reducing friction between them. Each serous membrane is composed of a secretory epithelial layer and a connective tissue layer underneath. The epithelial layer, known as mesothelium, consists of a single layer of avascular flat nucleated cells (cuboidal epithelium) which produce the lubricating serous fluid. This fluid has a consistency similar to thin mucus. These cells are bound tightly to the underlying connective tissue. The connective tissue layer provides the blood vessels and nerves for the overlying secretory cells, and also serves as the binding layer which allows the whole serous membrane to adhere to organs and other structures.[WP] in FMA, SM = mesothelium + connective tissue. It excludes the cavity. Serous sac = SM + cavity. Note that the SM is a subtype of wall in FMA. - + FMA:9581 GAID:19 MESH:D012704 @@ -283081,18 +283002,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -283143,6 +283054,14 @@ Classes for population already exist in IDO ('organism population', I tendon http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg + + + + + + + + @@ -283152,23 +283071,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + OG - - - - - - + AEO @@ -283238,18 +283147,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A biological tissue mass, most commonly a mass of nerve cell bodies. TODO - check vert vs invert. Other species: Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia). // Subdivision of neural tree (organ) which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord); together with a nucleus and its associated nerve, it constitutes a neural tree (organ). Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion. // a cluster of nerve cells and associated glial cells (nuclear location) // Portion of tissue that contains cell bodies of neurons and is located outside the central nervous system. @@ -283259,7 +283158,7 @@ Classes for population already exist in IDO ('organism population', I Subdivision of nervous system which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord. Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion (adapted from Foundational Model of Anatomy)[NLXANAT:100302]. Cranial sensory placodes are focused areas of the head ectoderm of vertebrates that contribute to the development of the cranial sense organs and their associated ganglia. Placodes have long been considered a key character of vertebrates, and their evolution is proposed to have been essential for the evolution of an active predatory lifestyle by early vertebrates.[well established][VHOG] ganglionic - + AAO:0010426 AEO:0000135 BAMS:G @@ -283301,6 +283200,14 @@ Classes for population already exist in IDO ('organism population', I ganglion + + + + + + + + @@ -283310,23 +283217,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + Bgee:AN @@ -283965,12 +283862,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -283991,15 +283883,14 @@ Classes for population already exist in IDO ('organism population', I respiratory tract + + + + - - - - - - + NCBIBook:NBK10107 @@ -284553,7 +284444,7 @@ Classes for population already exist in IDO ('organism population', I Any part or collection of parts of the central or peripheral nervous system. Parts may span both CNS and PNS. - + 2009-06-18T09:00:04Z BIRNLEX:1157 NCIT:C13040 @@ -284656,18 +284547,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm. merge with non-neural. In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube) @@ -284693,6 +284573,10 @@ Classes for population already exist in IDO ('organism population', I external ectoderm http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png + + + + @@ -284702,12 +284586,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -284820,12 +284699,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -284868,15 +284742,14 @@ Classes for population already exist in IDO ('organism population', I morula http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png + + + + - - - - - - + EHDAA2 @@ -285029,18 +284902,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A mass of cells that develop into the body of the embryo and some extraembryonic tissues. A group of cells found in the mammalian blastocyst that give rise to the embryo. [Biology_Online][VHOG] A small sphere of cells known as the inner cell mass lies within the trophoblast (of all eutherian mammals).[well established][VHOG] @@ -285068,26 +284931,24 @@ Classes for population already exist in IDO ('organism population', I inner cell mass https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg + + + + + + + + - - - - - - + Wikipedia - - - - - - + Wikipedia @@ -285155,12 +285016,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -285193,15 +285049,14 @@ Classes for population already exist in IDO ('organism population', I trophoblast https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg + + + + - - - - - - + MP-def PMID:19829370 @@ -285268,12 +285123,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A flattened, almost circular bilaminar plate of cells formed when the inner cell mass (aka embryoblast) forms two epithelial layers, each of a distinct lineage, separated by an extracellular basement membrane: the external (dorsal) layer is called the epiblast and the internal (ventral) layer is called the hypoblast (aka primitive endoderm); together, they compose the bilaminar embryonic disc. embryonic disc embryonic shield @@ -285293,15 +285143,14 @@ Classes for population already exist in IDO ('organism population', I bilaminar disc http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png + + + + - - - - - - + Wikipedia @@ -285402,14 +285251,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Nonparenchymatous organ that primarily consists of dense connective tissue organized into a sheet which interconnects two or more organs, separates two or more body spaces from one another, or surrounds an organ or body part. Examples: interosseous membrane of forearm, obturator membrane, tympanic membrane, fibrous pericardium, fascia lata, dura mater. [FMA]. - + 2009-07-30T05:19:13Z membrane FMA:7145 @@ -285418,15 +285262,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0000094 membrane organ + + + + - - - - - - + FMA-def @@ -285449,16 +285292,11 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Portion of neural crest that develops from the dorsal neural tube. It overlaps the vagal neural crest and migrates to populate the pharyngeal arches 3, 4 and 6 (producing structures in the head) and to the heart, forming connective tissue that separates the great vessels of the heart. [Wikipedia]. A subpopulation of the cephalic neural crest that emerges from the otic level to the anterior limit of somite 4. It migrates to the heart and is essential for the septation of the outflow track[DOI:10.1242/dev.091751]. ZFA treats this as a subtype of NC. - + 2009-07-30T07:57:38Z TAO:0002173 Wikipedia:Cardiac_neural_crest @@ -285471,15 +285309,14 @@ Classes for population already exist in IDO ('organism population', I cardiac neural crest + + + + - - - - - - + Wikipedia @@ -285946,12 +285783,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -285987,15 +285819,14 @@ Classes for population already exist in IDO ('organism population', I gastrula stage + + + + - - - - - - + BILS @@ -286409,12 +286240,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -286442,6 +286268,10 @@ Classes for population already exist in IDO ('organism population', I lung bud http://upload.wikimedia.org/wikipedia/commons/7/71/Gray948.png + + + + @@ -286451,12 +286281,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -286568,12 +286393,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -286599,15 +286419,14 @@ Classes for population already exist in IDO ('organism population', I neural nucleus + + + + - - - - - - + we limit this structure by definition to chordate and vertebrate nervous systems @@ -286750,12 +286569,6 @@ Classes for population already exist in IDO ('organism population', I UBERON:0000154 posterior region of body - - - - - lexical - @@ -286824,12 +286637,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -286868,15 +286676,14 @@ Classes for population already exist in IDO ('organism population', I anal canal https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png + + + + - - - - - - + Wikipathways:WP2062 @@ -287059,18 +286866,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -287103,26 +286900,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0000162 cloaca + + + + + + + + - - - - - - + ZFA - - - - - - + AAO @@ -287205,18 +287000,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -287235,26 +287020,24 @@ Classes for population already exist in IDO ('organism population', I embryonic cloaca + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -287762,12 +287545,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -287813,15 +287591,14 @@ Classes for population already exist in IDO ('organism population', I pair of lungs + + + + - - - - - - + FMA-abduced @@ -287997,30 +287774,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - - - - - - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -288028,8 +287790,8 @@ Classes for population already exist in IDO ('organism population', I Highly specialized circulating tissue consisting of several types of cells suspended in a fluid medium known as plasma.[AAO] relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO] Recent findings strongly suggest that the molecular pathways involved in the development and function of blood cells are highly conserved among vertebrates and various invertebrates phyla. (...) There is now good reason to believe that, in vertebrates and invertebrates alike, blood cell lineages diverge from a common type of progenitor cell, the hemocytoblast.[well established][VHOG] - - + + AAO:0000046 BTO:0000089 CALOHA:TS-0079 @@ -288064,37 +287826,34 @@ Classes for population already exist in IDO ('organism population', I blood + + + + + + + + + + + + - - - - - - + CL:tm - - - - - - + https://github.com/obophenotype/uberon/issues/1330 - - - - - - + Bgee:AN @@ -288185,7 +287944,7 @@ Classes for population already exist in IDO ('organism population', I Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs. - + 2009-04-08T04:38:19Z CARO:0000081 uberon @@ -288210,12 +287969,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -288250,6 +288004,10 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/9/97/Gray136.png https://upload.wikimedia.org/wikipedia/commons/5/5b/Frontal_bone.png + + + + @@ -288259,12 +288017,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -288372,12 +288125,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -288410,15 +288158,14 @@ Classes for population already exist in IDO ('organism population', I atlanto-occipital joint http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png + + + + - - - - - - + FMA-abduced-lr @@ -288782,12 +288529,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The branched tubular glands found in the mucosa of the fundus and body of the stomach which contain parietal cells that secrete hydrochloric acid and zymogenic cells that produce pepsin. BTO:0000503 EMAPA:27181 @@ -288798,6 +288540,10 @@ Classes for population already exist in IDO ('organism population', I gastric gland + + + + @@ -288807,12 +288553,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ISBN:0073040584 @@ -289765,12 +289506,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -289797,6 +289533,10 @@ Classes for population already exist in IDO ('organism population', I syncytiotrophoblast http://upload.wikimedia.org/wikipedia/commons/d/df/Gray36.png + + + + @@ -289806,12 +289546,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EMAPA @@ -290931,12 +290666,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -290978,15 +290708,14 @@ Classes for population already exist in IDO ('organism population', I organism substance + + + + - - - - - - + this relationship may be too strong and may be weakened in future @@ -292073,12 +291802,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -292122,15 +291846,14 @@ Classes for population already exist in IDO ('organism population', I epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + - - - - - - + http://palaeos.com/metazoa/porifera/homoscleromorpha.html @@ -292731,12 +292454,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -292773,15 +292491,14 @@ Classes for population already exist in IDO ('organism population', I abdomen + + + + - - - - - - + MA @@ -293044,18 +292761,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -293093,15 +292799,14 @@ Classes for population already exist in IDO ('organism population', I ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png + + + + - - - - - - + Bgee:AN @@ -293160,12 +292865,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -293202,15 +292902,14 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png + + + + - - - - - - + Bgee:AN @@ -293271,12 +292970,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293327,6 +293021,10 @@ Classes for population already exist in IDO ('organism population', I mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png + + + + @@ -293336,12 +293034,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bgee:AN @@ -293553,12 +293246,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293582,10 +293270,10 @@ Classes for population already exist in IDO ('organism population', I An inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage.[TAO] Inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage.[AAO] proctodeal - - - - + + + + AAO:0011087 EHDAA2:0000121 EMAPA:25038 @@ -293608,6 +293296,10 @@ Classes for population already exist in IDO ('organism population', I proctodeum https://github.com/obophenotype/uberon/issues/685 + + + + @@ -293617,12 +293309,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -293695,12 +293382,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293741,12 +293423,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293826,6 +293503,14 @@ Classes for population already exist in IDO ('organism population', I stomach https://upload.wikimedia.org/wikipedia/commons/e/e0/Stomach_diagram.svg + + + + + + + + @@ -293841,24 +293526,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + absent in lampreys and hagfishes ISBN:0073040584 - - - - - - + ISBN:0486692132 @@ -293946,12 +293621,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -294000,6 +293670,10 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb https://upload.wikimedia.org/wikipedia/commons/9/91/Aorta_scheme.jpg + + + + @@ -294009,12 +293683,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -294094,12 +293763,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -294208,15 +293872,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + + + + - - - - - - + MA @@ -294412,12 +294075,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -294442,12 +294100,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP]. requires review for applicability to invertebrate structures, e.g. synganglion @@ -294455,7 +294108,7 @@ Classes for population already exist in IDO ('organism population', I Part of the central nervous system situated within the cranium and composed of both nerve cell bodies and nerve fibers.[AAO] The part of the central nervous system contained within the cranium, comprising the forebrain, midbrain, hindbrain, and metencephalon. It is derived from the anterior part of the embryonic neural tube (or the encephalon). Does not include retina. (CUMBO) (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2).[well established][VHOG] - + AAO:0010478 ABA:Brain BAMS:Br @@ -294511,6 +294164,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + + + + + + + + @@ -294520,23 +294181,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + Bgee:AN @@ -294789,24 +294440,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -294831,12 +294467,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -294892,48 +294523,44 @@ Classes for population already exist in IDO ('organism population', I cornea http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + + + + + + + + + + + + + - - - - - - + MA - - - - - - + MA - - - - - - + FMA-isa - - - - - - + definitional @@ -295123,24 +294750,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -295151,12 +294763,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -295213,48 +294820,44 @@ Classes for population already exist in IDO ('organism population', I retina http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png + + + + + + + + + + + + + + + + - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA - - - - - - + EHDAA2 @@ -295328,18 +294931,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -295375,26 +294968,24 @@ Classes for population already exist in IDO ('organism population', I eye + + + + + + + + - - - - - - + PMID:21062451 - - - - - - + PMID:21062451 @@ -295565,10 +295156,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -295582,12 +295170,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -295654,15 +295237,14 @@ Classes for population already exist in IDO ('organism population', I pleura http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png + + + + - - - - - - + https://github.com/obophenotype/uberon/issues/86 @@ -295837,12 +295419,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -295911,15 +295488,14 @@ Classes for population already exist in IDO ('organism population', I pons http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png + + + + - - - - - - + neuronames @@ -296037,7 +295613,7 @@ Classes for population already exist in IDO ('organism population', I Anatomical system which consists of organs and tissues associated with sexual reproduction of the organism.[AAO] Arguably, one of the most important aspects of urbilaterian organogenesis would have been gonadogenesis, since Urbilateria must have successfully generated gametes and developed a strategy for extrusion and fertilization, in order to be the ancestor of all living Bilateria.[well established][VHOG] - 2022-06-10T18:22:34Z + 2022-06-10T18:22:34Z AAO:0010258 BILA:0000103 BTO:0000081 @@ -297721,12 +297297,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -297793,15 +297364,14 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png + + + + - - - - - - + Bgee:AN @@ -297905,12 +297475,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -297965,6 +297530,10 @@ Classes for population already exist in IDO ('organism population', I central nervous system + + + + @@ -297975,12 +297544,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bgee:AN @@ -298207,12 +297771,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A nerve that transmits from sensory receptors on the surface of the body to the central nervous system. AEO:0000201 EHDAA2:0003200 @@ -298227,15 +297786,14 @@ Classes for population already exist in IDO ('organism population', I sensory nerve + + + + - - - - - - + AEO @@ -298392,18 +297950,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP]. consider splitting class One of the extraembryonic fetal membranes that balloons out from the fetal midgut. [TFD][VHOG] @@ -298434,6 +297982,14 @@ Classes for population already exist in IDO ('organism population', I yolk sac http://upload.wikimedia.org/wikipedia/commons/1/17/Gray22.png + + + + + + + + @@ -298449,23 +298005,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ISBN:0073040584 - - - - - - + ISBN:0073040584 @@ -298625,12 +298171,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED]. A funnel-shaped fibromuscular tube that conducts food to the ESOPHAGUS, and air to the LARYNYX and LUNGS. It is located posterior to the NASAL CAVITY; ORAL CAVITY; and LARYNX, and extends from the SKULL BASE to the inferior border of the CRICOID CARTILAGE anteriorly and to the inferior border of the C6 vertebra posteriorly. It is divided into the NASOPHARYNX; OROPHARYNX; and HYPOPHARYNX (laryngopharynx)[MESH:A03.867]. Anatomical cavity bounded by the derivatives of the branchial arches.[AAO] @@ -298672,15 +298213,14 @@ Classes for population already exist in IDO ('organism population', I Consider generalizing to deuterostome pharynx chordate pharynx + + + + - - - - - - + EHDAA2 @@ -298983,12 +298523,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -299025,15 +298560,14 @@ Classes for population already exist in IDO ('organism population', I hindgut http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png + + + + - - - - - - + Wikipedia @@ -299289,30 +298823,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - - - - - - - + + @@ -299366,6 +298885,18 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb + + + + + + + + + + + + @@ -299376,34 +298907,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + EHDAA2 - - - - - - + ISBN:0073040584 @@ -299511,12 +299027,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -299563,6 +299074,10 @@ Classes for population already exist in IDO ('organism population', I ventral pancreatic duct http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png + + + + @@ -299572,12 +299087,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -299662,12 +299172,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A zone of skin that is part of a back [Automatically generated definition]. EMAPA:36392 FMA:10462 @@ -299684,6 +299189,10 @@ Classes for population already exist in IDO ('organism population', I EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region skin of back + + + + @@ -299693,12 +299202,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -299732,24 +299236,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP]. not homologous to the external carotid of zebrafish (Goodrich, 1958) - http://zfish.nichd.nih.gov/zfatlas/Intro%20Page/comparative.html; check XAO @@ -299782,6 +299271,18 @@ Classes for population already exist in IDO ('organism population', I https://sourceforge.net/tracker/?func=detail&aid=3486863&group_id=76834&atid=1127722 http://upload.wikimedia.org/wikipedia/commons/1/13/External_carotid_a.gif + + + + + + + + + + + + @@ -299791,34 +299292,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + EHDAA2 - - - - - - + FMA @@ -300129,24 +299615,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + @@ -300187,6 +299663,14 @@ Classes for population already exist in IDO ('organism population', I pericardial cavity + + + + + + + + @@ -300196,23 +299680,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + Wikipedia @@ -300285,12 +299759,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -300322,15 +299791,14 @@ Classes for population already exist in IDO ('organism population', I endocardium of ventricle + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -300468,12 +299936,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -300501,15 +299964,14 @@ Classes for population already exist in IDO ('organism population', I myocardium of ventricle + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -300953,12 +300415,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The second vertebral bone in the vertebral column. Vertebra that is posteriorly adjacent to vertebra 1.[TAO] @@ -300994,15 +300451,14 @@ Classes for population already exist in IDO ('organism population', I vertebral bone 2 + + + + - - - - - - + FMA @@ -301303,12 +300759,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -301319,12 +300770,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -301370,26 +300816,24 @@ Classes for population already exist in IDO ('organism population', I diaphragm + + + + + + + + - - - - - - + PMID:23586979 - - - - - - + definitional @@ -301689,12 +301133,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -301775,15 +301214,14 @@ Classes for population already exist in IDO ('organism population', I vertebral column + + + + - - - - - - + cjm @@ -302218,10 +301656,10 @@ Classes for population already exist in IDO ('organism population', I Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons.[TAO] Tissue which consists of skeletal muscle fibers surrounded by endomysium. Examples: Skeletal muscle tissue of biceps, Skeletal muscle tissue of diaphragm[FMA] This result implies the following views in terms of evolutionary differentiation: (1) Arthropod striated muscle and vertebrate skeletal and cardiac muscles share a common ancestor. In other words, they did not evolve independently (...) (5) The divergence of vertebrate skeletal and cardiac muscles/vertebrate smooth muscle and nonmuscle is at least before that of vertebrates/arthropods. In other words, emergence of skeletal and cardiac musle type tissues preceded the vertebrate/arthropod divergence (ca. 700 MYA).[well established][VHOG] - - - - + + + + skeletal muscle EMAPA:32716 FMA:14069 @@ -302469,12 +301907,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). AEO:0000111 BTO:0002422 @@ -302499,15 +301932,14 @@ Classes for population already exist in IDO ('organism population', I mesothelium http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg + + + + - - - - - - + FMA @@ -302622,12 +302054,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + In anatomy, the superior mesenteric vein (SMV) is a blood vessel that drains blood from the small intestine. At its termination behind the neck of the pancreas, the SMV combines with the splenic vein to form the hepatic portal vein. The SMV lies to the right of the similarly named artery, the superior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted]. BTO:0002783 @@ -302650,15 +302077,14 @@ Classes for population already exist in IDO ('organism population', I superior mesenteric vein http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png + + + + - - - - - - + Wikipedia:Vitelline_vein @@ -302717,12 +302143,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Vein that carries blood away from the liver[ZFA]. todo - add developmental relationships for other taxa @@ -302753,15 +302174,14 @@ Classes for population already exist in IDO ('organism population', I hepatic vein http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png + + + + - - - - - - + FMA-abduced-lr @@ -302986,12 +302406,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -303027,6 +302442,10 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png + + + + @@ -303036,12 +302455,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -303089,12 +302503,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -303149,6 +302558,10 @@ Classes for population already exist in IDO ('organism population', I colon + + + + @@ -303159,12 +302572,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -303230,12 +302638,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity. BTO:0000645 @@ -303267,6 +302670,10 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb + + + + @@ -303276,12 +302683,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -303387,12 +302789,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -303446,6 +302843,10 @@ Classes for population already exist in IDO ('organism population', I pyloric antrum http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg + + + + @@ -303455,12 +302856,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -303965,12 +303361,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -303987,6 +303378,10 @@ Classes for population already exist in IDO ('organism population', I portal lobule + + + + @@ -303996,12 +303391,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA MP @@ -304025,12 +303415,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -304056,15 +303441,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0001172 hepatic acinus + + + + - - - - - - + cjm @@ -304300,30 +303684,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + @@ -304352,6 +303716,22 @@ Classes for population already exist in IDO ('organism population', I common hepatic duct http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg + + + + + + + + + + + + + + + + @@ -304361,45 +303741,25 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + Wikipedia - - - - - - + Wikipedia - - - - - - + definitional @@ -304663,12 +304023,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -304710,15 +304065,14 @@ Classes for population already exist in IDO ('organism population', I peritoneal cavity + + + + - - - - - - + Wikipedia @@ -306360,18 +305714,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A compound tubular submucosal gland found in that portion of the duodenum which is above the hepatopancreatic sphincter (Sphincter of Oddi). The main function of these glands is to produce a mucus-rich alkaline secretion (containing bicarbonate)[WP]. currently defined as equivalent to any submucosal gland in the duodenum. Said to be absent outside mammlian (Andrew 1959) but Ziswiler and Farner (1972) noted similar glands at the gastroduodenal junction of some birds @@ -306397,6 +305741,14 @@ Classes for population already exist in IDO ('organism population', I duodenal gland + + + + + + + + @@ -306406,23 +305758,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA, modified - - - - - - + unclear for Aves ISBN:9780521617147 @@ -306479,12 +305821,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -306530,6 +305867,10 @@ Classes for population already exist in IDO ('organism population', I intestinal villus http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg + + + + @@ -306539,12 +305880,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -306657,12 +305993,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A blood vessel that drains blood from the large intestine that usually terminates when reaching the splenic vein, which goes on to form the portal vein with the superior mesenteric vein (SMV). Anatomical variations include the IMV draining into the confluence of the SMV and splenic vein and the IMV draining in the SMV. The IMV lies to the right of the similarly name artery, the inferior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted]. BTO:0002782 @@ -306686,15 +306017,14 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + FMA/obol @@ -307383,12 +306713,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -307420,6 +306745,10 @@ Classes for population already exist in IDO ('organism population', I interlobular bile duct + + + + @@ -307430,12 +306759,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA MA MP @@ -307577,12 +306901,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -307614,15 +306933,14 @@ Classes for population already exist in IDO ('organism population', I pancreatic acinus + + + + - - - - - - + FMA @@ -307672,24 +306990,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + An endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones[GO]. Organ which secretes a fluid containing enzymes that aid in the digestion of food.[AAO] @@ -307735,37 +307038,34 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pancreas.glb https://upload.wikimedia.org/wikipedia/commons/7/7e/Blausen_0699_PancreasAnatomy2.png + + + + + + + + + + + + - - - - - - + PMID:16417468 - - - - - - + Wikipedia - - - - - - + Wikipedia @@ -307830,12 +307130,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A trabecula that is part of a spleen. EMAPA:35808 @@ -307853,15 +307148,14 @@ Classes for population already exist in IDO ('organism population', I trabecula of spleen + + + + - - - - - - + FMA @@ -308447,12 +307741,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -308482,15 +307771,14 @@ Classes for population already exist in IDO ('organism population', I liver parenchyma + + + + - - - - - - + XAO @@ -308559,12 +307847,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -308614,15 +307897,14 @@ Classes for population already exist in IDO ('organism population', I hepatic sinusoid + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -308687,18 +307969,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -308741,6 +308013,14 @@ Classes for population already exist in IDO ('organism population', I intralobular bile duct + + + + + + + + @@ -308750,23 +308030,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + FMA @@ -308827,17 +308097,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - + Muscle (organ) which is a part of the pelvis. Examples: levator ani,. @@ -308855,20 +308115,19 @@ Classes for population already exist in IDO ('organism population', I muscle of pelvis + + + + + + + + + - - - - - - - - - - - + FMAdef @@ -308921,12 +308180,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The anus and surrounding regions. Encompasses both internal and external regions, where present. Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG] EFO:0000847 @@ -308952,15 +308206,14 @@ Classes for population already exist in IDO ('organism population', I https://github.com/obophenotype/uberon/issues/507 http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png + + + + - - - - - - + cjm @@ -309819,10 +309072,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -309834,12 +309084,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Skeletal element that is composed of bone tissue. @@ -309889,15 +309134,14 @@ Classes for population already exist in IDO ('organism population', I bone element + + + + - - - - - - + VSAO-modified @@ -310096,12 +309340,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310145,15 +309384,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + EHDAA2 @@ -310208,12 +309446,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a pelvic girdle [Automatically generated definition]. Note that in MA, this is a subclass of pelvis muscle; in FMA this is a hindlimb muscle, but recall in FMA hindlimb includes the girdle. UBERON:0003271 @@ -310235,15 +309468,14 @@ Classes for population already exist in IDO ('organism population', I muscle of pelvic girdle + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -310313,12 +309545,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310366,15 +309593,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + left arch 4 in human embryology.ch @@ -310438,12 +309664,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310479,6 +309700,10 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + @@ -310488,12 +309713,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -310632,12 +309852,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310686,15 +309901,14 @@ Classes for population already exist in IDO ('organism population', I abdominal aorta http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png + + + + - - - - - - + FMA @@ -310864,12 +310078,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310907,6 +310116,10 @@ Classes for population already exist in IDO ('organism population', I common carotid artery plus branches http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg + + + + @@ -310916,12 +310129,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -310993,18 +310201,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + One of two laterally paired arteries that supplies the pectoral appendages, usually branching from the dorsal aorta. Developmental relationships should be added (intersegmental artery and right dorsal aorta in EHDAA2, occipitovertebral artery in XAO) @@ -311042,26 +310240,24 @@ Classes for population already exist in IDO ('organism population', I subclavian artery http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -311245,12 +310441,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -311305,15 +310496,14 @@ Classes for population already exist in IDO ('organism population', I digestive tract + + + + - - - - - - + NCBIBook:NBK10107 @@ -311577,12 +310767,6 @@ Classes for population already exist in IDO ('organism population', I anterior vena cava http://upload.wikimedia.org/wikipedia/commons/b/b4/Venenwinkel.png - - - - - lexical - @@ -311733,12 +310917,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted]. BTO:0000654 @@ -311761,6 +310940,10 @@ Classes for population already exist in IDO ('organism population', I ciliary muscle http://upload.wikimedia.org/wikipedia/commons/2/28/Gray872.png + + + + @@ -311776,12 +310959,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -311899,30 +311077,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + A sphincter muscle that is part of the iris. In humans, it functions to constrict the pupil in bright light or during accommodation. Its dimensions are about 0.75 mm wide by 0.15 mm thick. It is controlled by parasympathetic fibers that originate from the Edinger-Westphal nucleus, travel along the oculomotor nerve (CN III), synapse in the ciliary ganglion, and then enter the eye via the short ciliary nerves. Initially, all the myocytes are of the smooth muscle type, but much later in life, so that ultimately most cells are of the striated muscle type. [WP,unvetted] WP says: It is found in vertebrates and some cephalopods; this class refers to the vertebrate structure @@ -311957,6 +311115,22 @@ Classes for population already exist in IDO ('organism population', I sphincter pupillae http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png + + + + + + + + + + + + + + + + @@ -311966,47 +311140,27 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ISBN:0781772214 - - - - - - + encircles iris dbpedia - - - - - - + encircles iris dbpedia - - - - - - + dbpedia @@ -312113,30 +311267,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + A smooth muscle of the eye, running radially in the iris that functions as a dilator. [WP,unvetted]. It is innervated by the sympathetic system, which acts by releasing noradrenaline, which acts on alpha1-receptors. Thus, when presented with a threatening stimuli that activates the fight-or-flight response, this innervation dilates the iris, thus temporarily letting more light reach the retina @@ -312173,6 +311307,22 @@ Classes for population already exist in IDO ('organism population', I dilatator pupillae http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png + + + + + + + + + + + + + + + + @@ -312182,47 +311332,27 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ISBN:0781772214 - - - - - - + outer margins of iris dbpedia - - - - - - + inner margins of iris dbpedia - - - - - - + dbpedia @@ -312904,30 +312034,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + The first major branch of the abdominal aorta. EHDAA2:0004519 @@ -312959,48 +312069,44 @@ Classes for population already exist in IDO ('organism population', I celiac artery http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png + + + + + + + + + + + + + + + + - - - - - - + ISBN:0073040584 - - - - - - + ISBN:0073040584 - - - - - - + ISBN:0073040584 - - - - - - + ISBN:0073040584 @@ -313121,12 +312227,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -313188,15 +312289,14 @@ Classes for population already exist in IDO ('organism population', I trigeminal nerve https://upload.wikimedia.org/wikipedia/commons/9/99/Gray778_Trigeminal.png + + + + - - - - - - + Wikipedia @@ -313463,12 +312563,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The anterior facial vein (facial vein) commences at the side of the root of the nose, and is a direct continuation of the angular vein where it also receives a small nasal branch. It lies behind the facial artery and follows a less tortuous course. It receives blood from the external palatine vein before it either joins the anterior branch of the retromandibular vein to form the common facial vein, or drains directly into the internal jugular vein. [WP,unvetted]. Vein which collects blood from muscles of the head and drains into the external jugular vein.[AAO] @@ -313492,15 +312587,14 @@ Classes for population already exist in IDO ('organism population', I facial vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png + + + + - - - - - - + FMA @@ -313576,12 +312670,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -313592,9 +312681,9 @@ Classes for population already exist in IDO ('organism population', I consider renaming this 'trigeminal ganglion complex'. The complex may be fused (amniotes) partially fused (xenopus) or separate (sharks) A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.[TAO] In Xenopus, the profundal and the trigeminal ganglia are separate distally but fused at their proximal end as they condense around NF stage 24. - - - + + + AAO:0011107 BAMS:5Gn BAMS:GV @@ -313642,6 +312731,10 @@ Classes for population already exist in IDO ('organism population', I trigeminal ganglion http://upload.wikimedia.org/wikipedia/commons/6/69/Gray776.png + + + + @@ -313651,12 +312744,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bgee:AN @@ -313780,36 +312868,11 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + @@ -313840,6 +312903,26 @@ Classes for population already exist in IDO ('organism population', I occipital bone http://upload.wikimedia.org/wikipedia/commons/2/27/Gray194.png + + + + + + + + + + + + + + + + + + + + @@ -313849,57 +312932,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + basi paired exo and supra occipital bones MA-modified - - - - - - + interparietal (postparietal) - - - - - - + WP - - - - - - + PMID:11523816 @@ -313961,30 +313019,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + An unpaired bone situated at the base of the skull in front of the temporal bone and basilar part of the occipital bone. The sphenoid bone is one of the seven bones that articulate to form the orbit. Its shape somewhat resembles that of a butterfly or bat with its wings extended. part of viscerocranium (facial skeleton) in FMA @@ -314013,6 +313051,22 @@ Classes for population already exist in IDO ('organism population', I sphenoid bone http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg + + + + + + + + + + + + + + + + @@ -314022,45 +313076,25 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + orbito pre and basi sphenoid - - - - - - + pterygoid process - - - - - - + alisphenoid - - - - - - + cjm @@ -314129,12 +313163,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -314170,6 +313199,10 @@ Classes for population already exist in IDO ('organism population', I ethmoid bone http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg + + + + @@ -314179,12 +313212,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + definitional @@ -314267,12 +313295,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -314305,15 +313328,14 @@ Classes for population already exist in IDO ('organism population', I orbit of skull + + + + - - - - - - + FMA-abduced-lr @@ -314491,12 +313513,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -314562,15 +313579,14 @@ Classes for population already exist in IDO ('organism population', I jaw skeleton + + + + - - - - - - + cjm @@ -314780,12 +313796,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -314820,15 +313831,14 @@ Classes for population already exist in IDO ('organism population', I lower jaw region http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png + + + + - - - - - - + Wikipedia:Mandibular_prominence @@ -315011,12 +314021,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -315041,15 +314046,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0001731 cavity of pharynx + + + + - - - - - - + XAO @@ -315328,12 +314332,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -315376,15 +314375,14 @@ Classes for population already exist in IDO ('organism population', I iris + + + + - - - - - - + XAO @@ -315457,12 +314455,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -315514,15 +314507,14 @@ Classes for population already exist in IDO ('organism population', I corneal epithelium http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png + + + + - - - - - - + ISBN:0781772214 @@ -315619,30 +314611,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + - - - - - - + @@ -315684,37 +314661,34 @@ Classes for population already exist in IDO ('organism population', I sclera http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + + + + + + + + + - - - - - - + FMA - - - - - - + ZFA - - - - - - + ISBN:0781772214 @@ -315765,12 +314739,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A skeletal muscle organ that is part of the trunk region. Note that this class excludes smooth muscle elements in the trunk region, such as the internal anal sphincter. This appears to be consistent with other ontologies such as FMA and ZFA which appear to only include skeletal muscles here. In fact the MA class 'trunk muscle' is classified as a 'set of skeletal muscles'. Many ontologies do not appear to have a coherent distinction between an individual muscle and the musculature (i.e. the set of muscles in a region), so we group all together here. @@ -315795,15 +314764,14 @@ Classes for population already exist in IDO ('organism population', I skeletal muscle of trunk + + + + - - - - - - + prolog @@ -315874,12 +314842,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -315918,15 +314881,14 @@ Classes for population already exist in IDO ('organism population', I ciliary body http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + - - - - - - + ISBN:0781772214 @@ -315974,24 +314936,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + @@ -316054,26 +315006,24 @@ Classes for population already exist in IDO ('organism population', I optic choroid http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + + + + + - - - - - - + MA - - - - - - + Wikipedia @@ -316174,12 +315124,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -316228,15 +315173,14 @@ Classes for population already exist in IDO ('organism population', I substantia propria of cornea http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png + + + + - - - - - - + cjm ISBN:0781772214 Wikipedia @@ -316304,33 +315248,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - - - - - - - + + + A double layer covering the ciliary body that produces aqueous humor. BTO:0001770 @@ -316350,6 +315276,18 @@ Classes for population already exist in IDO ('organism population', I ciliary epithelium + + + + + + + + + + + + @@ -316359,34 +315297,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + MP - - - - - - + Wikipedia @@ -316816,12 +315739,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -316857,15 +315775,14 @@ Classes for population already exist in IDO ('organism population', I aqueous humor of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + - - - - - - + FMA def states A and P located_in in EHDAA2 VHOG @@ -316989,18 +315906,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -317033,26 +315940,24 @@ Classes for population already exist in IDO ('organism population', I anterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/b/ba/Cataract_in_human_eye.png + + + + + + + + - - - - - - + FMA - - - - - - + cjm @@ -317104,18 +316009,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -317145,34 +316040,26 @@ Classes for population already exist in IDO ('organism population', I posterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + + + + + - - - - - - + FMA - - - - - - + cjm - - - - - lexical - @@ -317352,12 +316239,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The elastic, clear, membrane-like structure, that is outer most layer of the lens. The transparent membrane which surrounds the lens of the eye. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG] (...) we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya (reference 1); Although the eye varies greatly in adaptative details among vertebrates, its basic structure is the same in all. The human eye is representative of the design typical for a tetrapod. (...) A watery aqueous humor fills the spaces in the eye in front of the lens (...) (reference 2).[well established][VHOG] @@ -317383,15 +316265,14 @@ Classes for population already exist in IDO ('organism population', I capsule of lens http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png + + + + - - - - - - + EHDAA2 @@ -317561,12 +316442,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -317605,15 +316481,14 @@ Classes for population already exist in IDO ('organism population', I sympathetic ganglion http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png + + + + - - - - - - + DOI:10.1101/gr.157586.113 ISBN:0073040584 @@ -317677,12 +316552,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -317693,12 +316563,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -317741,6 +316606,14 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/9/90/Lips.JPG http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg + + + + + + + + @@ -317750,12 +316623,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + BTO FMA-implicit VHOG @@ -317764,12 +316632,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -318089,24 +316952,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO]. developmental relationships need revised @@ -318159,26 +317012,24 @@ Classes for population already exist in IDO ('organism population', I midbrain http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG + + + + + + + + - - - - - - + definitional - - - - - - + Bgee:AN @@ -318393,18 +317244,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Rostral segment of the hindbrain that has as its parts the pons (where present) and the cerebellum[WP,modified]. Anterior part of the hindbrain ventral to the cerebellum[BIRNLEX:965]. The anterior of two brain vesicles formed by specialization of the rhombencephalon in the developing embryo. It gives rise to cerebellum and pons. [TFD][VHOG] The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG] - + epencephalon BAMS:Met BIRNLEX:965 @@ -318434,15 +317280,14 @@ Classes for population already exist in IDO ('organism population', I metencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg + + + + - - - - - - + definitional @@ -318704,12 +317549,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of a small intestine [Automatically generated definition]. Intestinal epithelium which lines the lumen of the mid intestine.[TAO] BTO:0001258 @@ -318734,15 +317574,14 @@ Classes for population already exist in IDO ('organism population', I epithelium of small intestine + + + + - - - - - - + FMA @@ -319140,12 +317979,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP]. Together, our results reveal a shared basic organization in the tegmental domains of the diencephalon and midbrain of developing lamprey, indicating early appearance of the domain in vertebrate phylogeny.[well established][VHOG] @@ -319186,15 +318020,14 @@ Classes for population already exist in IDO ('organism population', I midbrain tegmentum http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png + + + + - - - - - - + ZFA @@ -319433,12 +318266,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -319497,15 +318325,14 @@ Classes for population already exist in IDO ('organism population', I bile + + + + - - - - - - + 0.3% in humans @@ -319716,12 +318543,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a esophagus [Automatically generated definition]. EMAPA:26987 FMA:63050 @@ -319750,15 +318572,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0001974 lamina propria of esophagus + + + + - - - - - - + FMA @@ -319990,12 +318811,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -320036,15 +318852,14 @@ Classes for population already exist in IDO ('organism population', I epithelium of esophagus + + + + - - - - - - + FMA @@ -320358,18 +319173,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -320382,12 +319187,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -320446,37 +319246,34 @@ Classes for population already exist in IDO ('organism population', I blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg + + + + + + + + + + + + - - - - - - + AEO - - - - - - + EHDAA2 - - - - - - + GO:0072360 @@ -321009,24 +319806,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + An artery that carries deoxygenated blood from heart to the lungs. They are the only arteries (other than umbilical arteries in the fetus) that carry deoxygenated blood.. @@ -321068,38 +319850,35 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png + + + + + + + + + + + + - - - - - - + Wikipedia - - - - - - + EHDAA2 XAO - - - - - - + EHDAA2 @@ -321494,12 +320273,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -321512,12 +320286,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA]. @@ -321568,27 +320337,25 @@ Classes for population already exist in IDO ('organism population', I hindbrain http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg + + + + + + + + - - - - - - + modified-source-relation ABA - - - - - - + Bgee:AN @@ -321953,12 +320720,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The pontine raphe nucleus is one of the raphe nuclei. It is located in the pontine tegmentum. [WP,unvetted]. @@ -321989,15 +320751,14 @@ Classes for population already exist in IDO ('organism population', I pontine raphe nucleus + + + + - - - - - - + Wikipedia @@ -322081,12 +320842,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -322189,15 +320945,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + + + + - - - - - - + some species only have a single lung @@ -322510,24 +321265,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles. assume spelling error for ncit EHDAA2:0004143 @@ -322545,6 +321285,18 @@ Classes for population already exist in IDO ('organism population', I truncus arteriosus + + + + + + + + + + + + @@ -322560,34 +321312,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -322618,12 +321355,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves[GO]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves[ZFA]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves.[TAO] relationship loss: develops_from endocardial ring (TAO:0005072)[TAO] @@ -322655,15 +321387,14 @@ Classes for population already exist in IDO ('organism population', I endocardial cushion http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png + + + + - - - - - - + ZFA @@ -322746,18 +321477,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The sinus venosus is a large cardiac chamber at the inflow tract that receives venous blood from systemic circulation. precedes the atrium on the venous side of the chordate heart. Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four components of the heart. The sinus venosus also acts as a pacemaker and is the first to contract. Kimmel et al, 1995.[TAO] Part of the circulatory system which receives blood from the systemic veins and contracts to pump the blood into the atrium of the heart.[AAO] @@ -322792,26 +321513,24 @@ Classes for population already exist in IDO ('organism population', I sinus venosus http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png + + + + + + + + - - - - - - + VHOG - - - - - - + Bgee:AN @@ -322914,12 +321633,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -322950,12 +321664,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP]. Consider adding a layer-of-skin grouping class for all skin layers @@ -322995,26 +321704,24 @@ Classes for population already exist in IDO ('organism population', I dermis http://upload.wikimedia.org/wikipedia/commons/2/23/EpidermisPainted.svg + + + + + + + + - - - - - - + FMA - - - - - - + definitional @@ -323072,12 +321779,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -323096,12 +321798,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. The hypodermis is used mainly for fat storage[WP]. A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells. Le Guellec et al, 2004.[TAO] @@ -323137,26 +321834,24 @@ Classes for population already exist in IDO ('organism population', I hypodermis http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg + + + + + + + + - - - - - - + ZFA - - - - - - + FMA-modified @@ -323588,18 +322283,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A cardiac ventricle that is in the right side of the heart. The muscular chamber on the right and in front of the left ventricle. It generally receives venous blood from the right atrium and conveys it into the pulmonary artery. [(1988)_Dorian_AF, Amsterdam, Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B._Anatomy, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier's_Encyclopaedic_Dictionary_of_Medicine][VHOG] @@ -323632,26 +322317,24 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + + + + + + + + - - - - - - + PMID:17276708 - - - - - - + cjm @@ -323830,12 +322513,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Cardiac chamber through which blood leaves the heart. A chamber of the heart that receives blood from one or more atria and pumps it by muscular contraction into the arteries.[AAO] One of four heart chambers.[TAO] @@ -323874,15 +322552,14 @@ Classes for population already exist in IDO ('organism population', I cardiac ventricle + + + + - - - - - - + Bgee:AN @@ -323957,12 +322634,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A cardiac ventricle that is in the left side of the heart. Thick-walled muscular chamber constituting the left border and apex of the heart. It receives oxygenated blood from the left atrium through the mitral orifice and send it off into the aorta. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG] @@ -323996,15 +322668,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + + + + - - - - - - + GO @@ -324580,7 +323251,7 @@ Classes for population already exist in IDO ('organism population', I Anatomical organ component composed of a double layer of serous membrane that suspends a viscus from the body wall or connects adjacent viscera and in doing so conveys blood vessels, lymphatics and nerves to and from the viscera. Examples: greater omentum, broad ligament of uterus, sigmoid mesocolon. mesenteric in Uberon, this term is used in the generic sense, not necessarily restricted to the peritoneum, consistent with FMA. WP: 'In anatomy, the mesentery is the double layer of peritoneum that suspends the jejunum and ileum from the posterior wall of the abdomen. Its meaning, however, is frequently extended to include double layers of peritoneum connecting various components of the abdominal cavity.'. TODO - check. Consider FMA:259286 - Region of mesentery. - + AAO:0011061 BTO:0001380 EV:0100083 @@ -324602,12 +323273,6 @@ Classes for population already exist in IDO ('organism population', I mesentery http://upload.wikimedia.org/wikipedia/commons/1/19/Gray1038.png - - - - - PMID:28192867 - @@ -324656,12 +323321,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -324707,15 +323367,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Skin.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-skin.glb + + + + - - - - - - + Wikipathways:WP2062 @@ -325065,12 +323724,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -325122,15 +323776,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spleen.glb https://upload.wikimedia.org/wikipedia/commons/d/d6/Illu_spleen.jpg + + + + - - - - - - + multiple sources - true spleen appear in jawed vertebrates @@ -325188,42 +323841,22 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + - - - - - - - - - - - - + + @@ -325303,6 +323936,22 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb https://upload.wikimedia.org/wikipedia/commons/6/64/Leber_Schaf.jpg + + + + + + + + + + + + + + + + @@ -325314,45 +323963,25 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA - - - - - - + ZFA-weakened - - - - - - + EHDAA2 - - - - - - + http://www.stembook.org/node/512 @@ -325584,12 +324213,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -325660,6 +324284,10 @@ Classes for population already exist in IDO ('organism population', I https://upload.wikimedia.org/wikipedia/commons/b/b1/GallbladderAnatomy-en.svg https://upload.wikimedia.org/wikipedia/commons/f/f4/Abdomal_organs.svg + + + + @@ -325669,12 +324297,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + definitional @@ -326305,12 +324928,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -326349,15 +324967,14 @@ Classes for population already exist in IDO ('organism population', I superior olivary complex http://upload.wikimedia.org/wikipedia/commons/4/46/Gray713.png + + + + - - - - - - + NIFSTD @@ -326456,12 +325073,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -326519,15 +325131,14 @@ Classes for population already exist in IDO ('organism population', I locus ceruleus http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png + + + + - - - - - - + check ZFA NIFSTD @@ -326655,12 +325266,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Nucleus containing parasympathetic neurons giving rise to the parasympathetic division of the facial nerve, innervating the salivary glands (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 703). @@ -326696,15 +325302,14 @@ Classes for population already exist in IDO ('organism population', I superior salivatory nucleus http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png + + + + - - - - - - + definitional @@ -326833,12 +325438,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers[GO]. Layer that lines the lumen of the heart.[TAO] Part of the heart comprised of thin serous membrane, composed of endothelial tissue, that lines the interior of the heart.[AAO] @@ -326880,15 +325480,14 @@ Classes for population already exist in IDO ('organism population', I endocardium http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png + + + + - - - - - - + Bgee:AN @@ -327370,12 +325969,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -327435,6 +326029,10 @@ Classes for population already exist in IDO ('organism population', I integument + + + + @@ -327444,12 +326042,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -327717,12 +326310,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Vasculature that is part of the eye region. not part of the eye in ZFA. Note this changed to a blood vessel in ZFA @@ -327745,15 +326333,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + ISBN:0781772214 @@ -327813,12 +326400,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -327837,7 +326419,7 @@ Classes for population already exist in IDO ('organism population', I Anatomical system that provides locomotion and physical support to the organism.[AAO] There are more than 50,000 extant vertebrate species, representing over 500 million years of evolution. During that time, the vertebrate musculoskeletal systems have adapted to aquatic, terrestrial, fossorial, and arboreal lifestyles, while simultaneously retaining functionally integrated axial and appendicular skeletal systems.[well established][VHOG] musculoskeletal - + AAO:0010546 CALOHA:TS-1311 EMAPA:32714 @@ -327859,15 +326441,14 @@ Classes for population already exist in IDO ('organism population', I musculoskeletal system + + + + - - - - - - + check ctenophore @@ -328152,30 +326733,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - - - - - - - + + Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO). TODO - add superclass to unify with VNC? @@ -328234,37 +326800,34 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spinal_Cord.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spinal_Cord.glb + + + + + + + + + + + + - - - - - - + ZFA - - - - - - + definitional - - - - - - + definitional @@ -328456,12 +327019,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -328512,15 +327070,14 @@ Classes for population already exist in IDO ('organism population', I ventral horn of spinal cord + + + + - - - - - - + FMA-abduced-lr @@ -328820,12 +327377,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -328855,15 +327407,14 @@ Classes for population already exist in IDO ('organism population', I dorsal mesentery http://upload.wikimedia.org/wikipedia/commons/8/85/Gray985.png + + + + - - - - - - + EHDAA2 @@ -329331,12 +327882,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -329377,15 +327923,14 @@ Classes for population already exist in IDO ('organism population', I EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen + + + + - - - - - - + definitional @@ -329491,12 +328036,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a back [Automatically generated definition]. EMAPA:35161 @@ -329510,15 +328050,14 @@ Classes for population already exist in IDO ('organism population', I muscle of back + + + + - - - - - - + prolog @@ -329567,24 +328106,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -329605,8 +328129,8 @@ Classes for population already exist in IDO ('organism population', I (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (3) a stiff, longitudinal rod of turgid cells along the dorsal part of the body that is called a notochord (...).[well established][VHOG] notochordal In between vertebra the notochord becomes the nucleus pulposus, under it degenerates, and at anterior end in some species its tissue merges with some of the cranial bones.. Some organisms retain a post-embryonic notochord. - - + + AAO:0000327 BTO:0001768 CALOHA:TS-0690 @@ -329641,6 +328165,18 @@ Classes for population already exist in IDO ('organism population', I notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + + + + + + + + + @@ -329656,34 +328192,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + http://tolweb.org/Chordata/2499 - - - - - - + ZFA - - - - - - + EHDAA2 @@ -329769,12 +328290,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -329785,12 +328301,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -329842,6 +328353,14 @@ Classes for population already exist in IDO ('organism population', I somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + + + + + @@ -329851,23 +328370,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + GOTAX:0000352 - - - - - - + ZFA @@ -330137,42 +328646,12 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -330212,72 +328691,66 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png + + + + + + + + + + + + + + + + + + + + + + + + - - - - - - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - - - - - - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - - - - - - + BTO - - - - - - + PMID:11523831 - - - - - - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - - - - - - + PMID:11523831 @@ -330650,30 +329123,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + - - - - - - + A region of the serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart. External layer of the heart.[TAO] @@ -330703,37 +329161,34 @@ Classes for population already exist in IDO ('organism population', I EDITOR_NOTE TODO - check links with UBERON:0002425 visceral serous pericardium. develops from proepicardium. WP:Epicardium -- When considered as a part of the pericardium, it is the inner layer, or visceral pericardium, continuous with the serous layer. epicardium + + + + + + + + + + + + - - - - - - + multiple - - - - - - + FMA-inferred - - - - - - + FMA @@ -330920,36 +329375,11 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + @@ -330986,6 +329416,26 @@ Classes for population already exist in IDO ('organism population', I conducting system of heart + + + + + + + + + + + + + + + + + + + + @@ -330995,56 +329445,31 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA @@ -331111,12 +329536,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -331180,6 +329600,10 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/d/d2/Sinoatrial_node_low_mag.jpg http://upload.wikimedia.org/wikipedia/commons/d/de/Sinoatrial_node_2_low_mag.jpg + + + + @@ -331189,12 +329613,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -331471,18 +329890,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -331512,6 +329921,14 @@ Classes for population already exist in IDO ('organism population', I cardiac Purkinje fiber http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png + + + + + + + + @@ -331521,12 +329938,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -331534,12 +329946,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -331681,12 +330088,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -331699,12 +330101,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Serous membrane which is divided into parietal and visceral serous pericardium. EMAPA:19030 FMA:9582 @@ -331718,26 +330115,24 @@ Classes for population already exist in IDO ('organism population', I serous pericardium + + + + + + + + - - - - - - + FMA - - - - - - + FMA @@ -331778,12 +330173,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -331821,15 +330211,14 @@ Classes for population already exist in IDO ('organism population', I peritoneum http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png + + + + - - - - - - + MP @@ -331883,24 +330272,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA]. most superficial part of pericardium; continuous with the outer adventitial layer of the neighboring great blood vessels. [Wikipedia:Pericardium] EMAPA:19029 @@ -331916,6 +330295,14 @@ Classes for population already exist in IDO ('organism population', I fibrous pericardium + + + + + + + + @@ -331925,23 +330312,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + WP @@ -332153,12 +330530,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -332216,15 +330588,14 @@ Classes for population already exist in IDO ('organism population', I bone marrow http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg + + + + - - - - - - + FMA MA @@ -332296,18 +330667,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -332346,26 +330707,24 @@ Classes for population already exist in IDO ('organism population', I defined generically so could in theory encompass FBbt:00003260 'skeletal muscle of head', or the muscle of a starfish Aristotle's lantern, but we restrict this to craniates. Skeletal muscles of the head originate from the non-segmented head mesoderm (Noden, 1983; Wachtler et al., 1984) cranial muscle + + + + + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - - - - - - + EHDAA2-abduced @@ -332440,12 +330799,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle that is part of the cervical (neck) region. EMAPA:36050 @@ -332467,15 +330821,14 @@ Classes for population already exist in IDO ('organism population', I muscle of neck + + + + - - - - - - + prolog @@ -332533,12 +330886,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -332570,15 +330918,14 @@ Classes for population already exist in IDO ('organism population', I muscle of abdomen + + + + - - - - - - + prolog @@ -332630,8 +330977,8 @@ Classes for population already exist in IDO ('organism population', I Portion of tissue that consists of mesodermally derived cells and intercellular matrix comprised of protein fibers and carbohydrates, which supports, ensheathes and binds together other tissues.[TAO] Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance.[VSAO] MA also has set of connective tissues - - + + AAO:0000098 BTO:0000421 CALOHA:TS-2009 @@ -332836,24 +331183,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + @@ -332902,26 +331239,24 @@ Classes for population already exist in IDO ('organism population', I hematopoietic system + + + + + + + + - - - - - - + FMA - - - - - - + definitional @@ -332977,28 +331312,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - + + @@ -333045,27 +331367,25 @@ Classes for population already exist in IDO ('organism population', I bile duct http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png + + + + + + + + - - - - - - + EMAPA MA - - - - - - + XAO @@ -333377,12 +331697,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -333427,15 +331742,14 @@ Classes for population already exist in IDO ('organism population', I visceral pleura + + + + - - - - - - + FMA @@ -333510,12 +331824,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -333561,15 +331870,14 @@ Classes for population already exist in IDO ('organism population', I pleural cavity http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png + + + + - - - - - - + Wikipedia @@ -333740,12 +332048,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A double-walled sac containing the heart and the roots of the great vessels. FMA:9868 RETIRED_EHDAA2:0001443 @@ -333759,15 +332062,14 @@ Classes for population already exist in IDO ('organism population', I pericardial sac http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png + + + + - - - - - - + FMA @@ -333786,12 +332088,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -333850,15 +332147,14 @@ Classes for population already exist in IDO ('organism population', I pericardium http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png + + + + - - - - - - + MA @@ -334051,12 +332347,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -334112,6 +332403,10 @@ Classes for population already exist in IDO ('organism population', I autonomic nervous system http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png + + + + @@ -334121,12 +332416,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EMAPA MA NIFSTD @@ -334559,8 +332849,8 @@ Classes for population already exist in IDO ('organism population', I Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle. (...) the integument of many tetrapods is reinforced by a morphologically and structurally diverse assemblage of skeletal elements. These elements are widely understood to be derivatives of the once all-encompassing dermal skeleton of stem-gnathostomes (...).[well established][VHOG] - - + + UBERON:0007029 AEO:0000154 BILA:0000118 @@ -334759,8 +333049,8 @@ Classes for population already exist in IDO ('organism population', I Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts.[VSAO] relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO] Phylogenetic analysis suggests that cartilage arose independently in cnidarians, hemichordates, vertebrates, arthropods, annelids, brachiopods, and molluscs - or a common ancestor of brachiopods and molluscs (...). Analyses of cartilage as a tissue and of the development of invertebrate cartilages are consistent with homology between invertebrate and vertebrate cartilage. From the discussion above, it will be clear that understanding genetic changes underlying cartilage evolution is key to determining whether the multiple origins of cartilage represent parallel evolution.[well established][VHOG] - - + + AAO:0000060 AEO:0000087 BTO:0000206 @@ -335094,12 +333384,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues. consider including separate class for developmental structure (adult human is stratified; in EHDAA2 is unilaminar) The epithelium that lines the oral cavity. The oral epithelium epithelial cells with many short microvilli as well as mucous cells, rodlet cells and taste buds[ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24]. @@ -335126,15 +333411,14 @@ Classes for population already exist in IDO ('organism population', I oral epithelium + + + + - - - - - - + AAO-modified @@ -335197,18 +333481,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -335236,26 +333510,24 @@ Classes for population already exist in IDO ('organism population', I visceral serous pericardium + + + + + + + + - - - - - - + cjm - - - - - - + FMA @@ -335801,12 +334073,6 @@ Classes for population already exist in IDO ('organism population', I VSAO - - - - - https://github.com/obophenotype/uberon/issues/117 - @@ -335866,27 +334132,14 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - + + @@ -335912,6 +334165,14 @@ Classes for population already exist in IDO ('organism population', I iris epithelium + + + + + + + + @@ -335921,23 +334182,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + MP @@ -336004,12 +334255,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -336037,15 +334283,14 @@ Classes for population already exist in IDO ('organism population', I trabecula carnea + + + + - - - - - - + WP @@ -336130,12 +334375,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -336146,9 +334386,9 @@ Classes for population already exist in IDO ('organism population', I placement in this class to be inferred Replacement bone that forms within cartilage.[VSAO] some structures, e.g. in ZFA are both intramembrane and endochondral - - - + + + AAO:0010776 AEO:0000083 BTO:0002157 @@ -336169,6 +334409,10 @@ Classes for population already exist in IDO ('organism population', I https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg + + + + @@ -336178,12 +334422,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VSAO @@ -336455,18 +334694,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -336492,6 +334721,14 @@ Classes for population already exist in IDO ('organism population', I tunica media https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg + + + + + + + + @@ -336501,23 +334738,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm - - - - - - + cjm @@ -336555,18 +334782,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The innermost layer of a blood vessel which is a lining of endothelial cells facing the lumen[Kardong]. the FMA class represents a more generic layer which is the superclass of the layer found in both blood vessels and lymph vessels (and also endocardium) - we should probably follow this structure the FMA class represents a structure which may have both epithelium and fibroelastic connective tissue as parts @@ -336591,6 +334808,14 @@ Classes for population already exist in IDO ('organism population', I tunica intima https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg + + + + + + + + @@ -336600,23 +334825,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + check for exceptions, e.g. capillaries - - - - - - + ISBN:0073040584 @@ -337008,24 +335223,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + One of a series of paired bulges that develop along the lateral walls of the foregut. The pharyngeal arches have developmental contributions from endoderm, mesoderm, and neural crest cells and are separated by anterior lateral endoderm out-pockets known as pharyngeal pouches. One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of the embryo.[AAO] A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down.[well established][VHOG] @@ -337061,6 +335261,18 @@ Classes for population already exist in IDO ('organism population', I pharyngeal arch http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png + + + + + + + + + + + + @@ -337070,34 +335282,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + PMID:16313389 - - - - - - + http://tolweb.org/Chordata/2499 - - - - - - + PMID:16313389 @@ -337166,12 +335363,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic. Do not merge with neurogenic placode Comparisons of developmental gene expression suggest that the anterior ectoderm in amphioxus may be homologous to the vertebrate olfactory placode, the only vertebrate placode with primary, not secondary, neurons @@ -337191,6 +335383,10 @@ Classes for population already exist in IDO ('organism population', I cranial placode + + + + @@ -337200,12 +335396,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + PMID:11523831 PMID:22512454 @@ -338200,12 +336391,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -338218,12 +336404,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate. consider adding class for organizer. Consider adding separate class for isthmus as a structure Lampreys also have an MHB [midbrain hindbrain boundary], expressing a similar repertoire of regulatory gene cognates as in gnathostomes.[well established][VHOG] @@ -338253,6 +336434,14 @@ Classes for population already exist in IDO ('organism population', I midbrain-hindbrain boundary + + + + + + + + @@ -338263,23 +336452,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA - - - - - - + ZFA @@ -338325,18 +336504,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A temporary epithelium that derives from the outer layer of the ectdoerm and is shed once the inner layer differentiates to form a true epidermis. The outermost epidermal layer covering the fish at embryonic stages; derived from the EVL and thought to eventually be replaced by the superficial stratum of the epidermis. Sometimes used synonymously with EVL. Le Guellec et al, 2004.[TAO] relationship type change: OBO_REL:part_of ectoderm (TAO:0000016) CHANGED TO: develops_from ectoderm (UBERON:0000924)[TAO] @@ -338365,6 +336534,14 @@ Classes for population already exist in IDO ('organism population', I periderm + + + + + + + + @@ -338374,23 +336551,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + ZFA @@ -338556,10 +336723,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -338576,12 +336740,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -338606,15 +336765,14 @@ Classes for population already exist in IDO ('organism population', I presomitic mesoderm + + + + - - - - - - + Bgee:AN @@ -338779,18 +336937,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A horseshoe-shaped thickening of the endoderm at the cranial (rostral) end of the primitive streak formed by the involution of Spemann's organizer cells which, together with the notochord, induces the formation of the neural plate from the overlying ectodermal cells and contributes mesodermal type cells to the surrounding tissue. TODO - check; developmental relationship to anterior hypoblast in ZFA? Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. Kimmel et al, 1995.[TAO] @@ -338815,26 +336963,24 @@ Classes for population already exist in IDO ('organism population', I prechordal plate + + + + + + + + - - - - - - + ZFA - - - - - - + PMID:16313393 @@ -338892,24 +337038,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -338951,37 +337082,34 @@ Classes for population already exist in IDO ('organism population', I intermediate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + + + + + + + + + - - - - - - + AAO - - - - - - + EMAPA - - - - - - + XAO @@ -339184,9 +337312,9 @@ Classes for population already exist in IDO ('organism population', I The ectodermal rudiment of the trigeminal ganglion, distinguishable during much of the segmentation period. Kimmel et al, 1995.[TAO] The dorsolateral placodes (trigeminal and vestibular) develop from ectoderm lateral to the brain (...). In summary, the collective term 'placodes' refers to some rather different structures, probably with different evolutionary origins. Some sensory placodes (at least the otic and olfactory) may have homologues in basal chordates. Even if this is so, it is apparent that they were elaborated considerably during early vertebrate evolution. Epibranchial and dorsolateral placodes appear to be new; we infer that their origin depended on the evolution of specific inductive signals.[well established][VHOG] Consider naming this 'trigeminal placode complex'. Also, Fig9-5 of ISBN:0471888893 calls this the profundus placode; XAO says 'profundal and the trigeminal ganglia are separate distally but fused at their proximal end...' - - - + + + EFO:0003433 EHDAA2:0004209 TAO:0000162 @@ -339294,12 +337422,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -339337,6 +337460,10 @@ Classes for population already exist in IDO ('organism population', I eye primordium + + + + @@ -339346,12 +337473,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + PMID:16496288 XAO @@ -339407,18 +337529,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -339447,26 +337559,24 @@ Classes for population already exist in IDO ('organism population', I optic cup + + + + + + + + - - - - - - + ZFA - - - - - - + ZFA @@ -339532,12 +337642,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -339578,6 +337683,10 @@ Classes for population already exist in IDO ('organism population', I lens placode http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png + + + + @@ -339587,12 +337696,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -339656,24 +337760,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -339705,37 +337794,34 @@ Classes for population already exist in IDO ('organism population', I neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png + + + + + + + + + + + + - - - - - - + GOTAX:0000352 - - - - - - + Wikipedia - - - - - - + Bgee:AN @@ -339855,12 +337941,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -339889,6 +337970,10 @@ Classes for population already exist in IDO ('organism population', I paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + @@ -339898,12 +337983,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bgee:AN @@ -339972,18 +338052,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -340009,6 +338079,14 @@ Classes for population already exist in IDO ('organism population', I epibranchial placode + + + + + + + + @@ -340019,23 +338097,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA - - - - - - + EHDAA2-abduced @@ -340119,12 +338187,6 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003080 anterior neural tube - - - - - lexical - @@ -340145,12 +338207,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -340194,6 +338251,10 @@ Classes for population already exist in IDO ('organism population', I lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + @@ -340203,12 +338264,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 VHOG @@ -340293,12 +338349,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -340341,6 +338392,10 @@ Classes for population already exist in IDO ('organism population', I myotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png + + + + @@ -340350,12 +338405,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2-abduced @@ -340418,12 +338468,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Trunk portion of the neural crest. The trunk neural crest lies between the vagal and sacral neural crest and gives rise to two groups of cells. One group migrates dorsolateral and populates the skin, forming pigment cells and the other migrates ventrolateral through the anterior sclerotome to become the epinephrine-producing cells of the adrenal gland and the neurons of the sympathetic nervous system. Some cells remain in the sclerotome to form the dorsal root ganglia [Wikipedia]. Post-cranial portion of the neural crest. Exact anatomical derivations not experimentally resolved in amphibians.[AAO] We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG] @@ -340443,15 +338488,14 @@ Classes for population already exist in IDO ('organism population', I trunk neural crest + + + + - - - - - - + ZFA @@ -340495,30 +338539,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + - - - - - - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -340538,6 +338567,18 @@ Classes for population already exist in IDO ('organism population', I heart primordium + + + + + + + + + + + + @@ -340547,34 +338588,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA - - - - - - + ZFA - - - - - - + XAO @@ -340706,18 +338732,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -340745,6 +338761,14 @@ Classes for population already exist in IDO ('organism population', I sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png + + + + + + + + @@ -340760,23 +338784,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VHOG:0000680 - - - - - - + ZFA @@ -341011,8 +339025,8 @@ Classes for population already exist in IDO ('organism population', I Anatomical structure that overlaps the outer epithelial layer and is adjacent to the space surrounding the organism. consider obsoleting. See issue/1305 Organism subdivision which is the collection of anatomical structures on the body surface.[ZFA] - - + + AAO:0010337 AEO_RETIRED:0000010 EHDAA2_RETIRED:0003010 @@ -342980,18 +340994,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -343023,26 +341027,24 @@ Classes for population already exist in IDO ('organism population', I skeleton of lower jaw + + + + + + + + - - - - - - + EHDAA2 - - - - - - + VHOG-modified @@ -343118,20 +341120,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -343158,6 +341152,10 @@ Classes for population already exist in IDO ('organism population', I mesentery of stomach + + + + @@ -343167,12 +341165,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -343484,21 +341477,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Racemose mucous glands beneath the mucous membrane of the pharynx. BTO:0004849 EHDAA2:0001461 @@ -343511,15 +341496,14 @@ Classes for population already exist in IDO ('organism population', I pharyngeal gland + + + + - - - - - - + BTO @@ -343628,12 +341612,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A blood island that is part of a mesoderm. in EHDAA2, gives rise to blood and dorsal aorta UBERON:0003305 @@ -343646,6 +341625,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003304 mesoderm blood island + + + + @@ -343655,12 +341638,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -343713,12 +341691,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a developing camera-type eye. TODO - change mesenchyme relationships to precursor_of EHDAA2:0000485 @@ -343730,15 +341703,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003314 eye mesenchyme + + + + - - - - - - + EHDAA2 @@ -343932,12 +341904,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a developing upper jaw [Automatically generated definition]. EHDAA2:0002124 EHDAA:8031 @@ -343950,15 +341917,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003323 mesenchyme of upper jaw + + + + - - - - - - + EHDAA2 @@ -344010,12 +341976,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a developing lower jaw [Automatically generated definition]. EHDAA2:0001024 EHDAA:8003 @@ -344028,15 +341989,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003324 mesenchyme of lower jaw + + + + - - - - - - + EHDAA2 @@ -345428,28 +343388,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - + + An epithelium that is part of a pharynx [Automatically generated definition]. Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side. Chen et al, 2007.[TAO] BSA:0000112 @@ -345469,26 +343416,24 @@ Classes for population already exist in IDO ('organism population', I pharyngeal epithelium + + + + + + + + - - - - - - + ZFA - - - - - - + ZFA @@ -345540,20 +343485,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + An epithelium that is part of a midgut. BTO:0005053 EHDAA2:0001195 @@ -345566,15 +343503,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003352 epithelium of midgut + + + + - - - - - - + BTO @@ -345867,12 +343803,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -345885,12 +343816,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An unilaminar epithelium that surrounds a pelvic appendage bud. UBERON:0005232 EHDAA2:0001034 @@ -345906,26 +343832,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003371 pelvic appendage bud ectoderm + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -345993,12 +343917,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -346011,12 +343930,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An unilaminar epithelium that surrounds a pectoral appendage bud. UBERON:0005231 UBERON:0005663 @@ -346033,26 +343947,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003372 pectoral appendage bud ectoderm + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -348492,21 +346404,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A bone that is part of a facial skeleton [Automatically generated definition]. test whether 'facial bone' is an exact synonym EMAPA:19019 @@ -348527,15 +346431,14 @@ Classes for population already exist in IDO ('organism population', I facial bone + + + + - - - - - - + MA @@ -348733,12 +346636,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The superior labial artery (superior labial branch of facial artery) is larger and more tortuous than the inferior labial artery. It follows a similar course along the edge of the upper lip, lying between the mucous membrane and the Orbicularis oris, and anastomoses with the artery of the opposite side. It supplies the upper lip, and gives off in its course two or three vessels which ascend to the nose; a septal branch ramifies on the nasal septum as far as the point of the nose, and an alar branch supplies the ala of the nose. EMAPA:37430 @@ -348755,15 +346653,14 @@ Classes for population already exist in IDO ('organism population', I artery of upper lip + + + + - - - - - - + FMA @@ -348829,12 +346726,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The inferior labial artery (inferior labial branch of facial artery) arises near the angle of the mouth; it passes upward and forward beneath the Triangularis and, penetrating the Orbicularis oris, runs in a tortuous course along the edge of the lower lip between this muscle and the mucous membrane. It supplies the labial glands, the mucous membrane, and the muscles of the lower lip; and anastomoses with the artery of the opposite side, and with the mental branch of the inferior alveolar artery. EMAPA:37429 @@ -348852,15 +346744,14 @@ Classes for population already exist in IDO ('organism population', I artery of lower lip + + + + - - - - - - + FMA @@ -349370,12 +347261,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An endothelium of capillary that is part of a respiratory system [Automatically generated definition]. EMAPA:37575 MA:0001808 @@ -349406,15 +347292,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003489 respiratory system capillary endothelium + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -349646,12 +347531,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An arteriole that is part of a respiratory system [Automatically generated definition]. EMAPA:37568 MA:0001803 @@ -349659,15 +347539,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003495 respiratory system arteriole + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -349701,12 +347580,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A blood vessel that is part of a head [Automatically generated definition]. EMAPA:36610 MA:0000575 @@ -349718,15 +347592,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003496 head blood vessel + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -353761,20 +351634,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -353801,6 +351666,10 @@ Classes for population already exist in IDO ('organism population', I intrahepatic bile duct + + + + @@ -353810,12 +351679,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -354801,12 +352665,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a thorax [Automatically generated definition]. MA:0000561 muscle organ of thorax @@ -354816,15 +352675,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003830 thoracic segment muscle + + + + - - - - - - + prolog @@ -354936,12 +352794,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a esophagus [Automatically generated definition]. merge muscle and muscle layer? EMAPA:26983 @@ -354958,15 +352811,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003832 esophagus muscle + + + + - - - - - - + MA @@ -355825,20 +353677,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A neural plate that develops_from a future spinal cord. Neural plate that is part of the spinal cord. [Bgee_curator][VHOG] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...)[well established][VHOG] @@ -355851,15 +353695,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003854 spinal cord neural plate + + + + - - - - - - + ZFA @@ -356062,12 +353905,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -356083,15 +353921,14 @@ Classes for population already exist in IDO ('organism population', I intraembryonic coelom + + + + - - - - - - + Wikipedia @@ -356187,18 +354024,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -356232,6 +354059,14 @@ Classes for population already exist in IDO ('organism population', I liver primordium + + + + + + + + @@ -356247,23 +354082,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + ventral foregut endoderm Zaret 1996 @@ -356386,12 +354211,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -356411,15 +354231,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003898 skeletal muscle tissue of trunk + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -356480,10 +354299,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -356500,12 +354316,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the retina that contains neurons and photoreceptor cells[GO]. (...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG] @@ -356537,15 +354348,14 @@ Classes for population already exist in IDO ('organism population', I retinal neural layer + + + + - - - - - - + Bgee:AN @@ -356827,12 +354637,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -356862,15 +354667,14 @@ Classes for population already exist in IDO ('organism population', I pancreas primordium http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png + + + + - - - - - - + Wikipedia @@ -356912,36 +354716,16 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + - - - - - - - - - - - - + + The embryonic pancreas develops from two separate anlagen in the foregut epithelium, one dorsal and two ventral pancreatic buds[PMID]. EFO:0003470 EMAPA:35645 @@ -356962,6 +354746,22 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/4/49/Suckale08FBS_fig1_pancreas_development.jpeg http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png + + + + + + + + + + + + + + + + @@ -356971,46 +354771,26 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + Wikipedia:Pancreas#Embryological_development - - - - - - + zebrafish Wikipedia:Pancreatic_bud - - - - - - + EHDAA2-inferred @@ -357052,18 +354832,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Pancreatic bud that gives rise to the accessory pancreatic duct. The pancreatic bud that gives rise to the accessory pancreatic duct.[AAO] In chick, Xenopus laevis, and the teleost fish Medaka, the pancreas develops from three buds that emerge from the gut tube, two from its ventral aspect, and one from its dorsal aspect. In mouse, although there are initially three buds that arise from the gut tube at the point of contact between the endoderm and the vasculature, the pancreas develops from only two of these buds, one dorsal and one ventral. (...) In this study, we use a transgenic zebrafish line (...). We provide evidence for the existence of two distinct pancreatic anlagen - a ventral anterior bud and a dorsal posterior bud - that join to form the definitive pancreas (reference 1); The pancreas develops from the fusion of distinct endoderm-derived dorsal and ventral diverticula. In humans, by day 35 of development, the ventral pancreatic bud begins to migrate backwards and comes into contact and eventually fuses with the dorsal pancreatic bud during the sixth week of development (reference 2).[well established][VHOG] @@ -357091,26 +354861,24 @@ Classes for population already exist in IDO ('organism population', I dorsal pancreatic bud http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png + + + + + + + + - - - - - - + EHDAA2 - - - - - - + XAO @@ -357157,18 +354925,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Pancreatic bud that gives rise to the major pancreatic duct. In chick, Xenopus laevis, and the teleost fish Medaka, the pancreas develops from three buds that emerge from the gut tube, two from its ventral aspect, and one from its dorsal aspect. In mouse, although there are initially three buds that arise from the gut tube at the point of contact between the endoderm and the vasculature, the pancreas develops from only two of these buds, one dorsal and one ventral. (...) In this study, we use a transgenic zebrafish line (...). We provide evidence for the existence of two distinct pancreatic anlagen - a ventral anterior bud and a dorsal posterior bud - that join to form the definitive pancreas (reference 1); The pancreas develops from the fusion of distinct endoderm-derived dorsal and ventral diverticula. In humans, by day 35 of development, the ventral pancreatic bud begins to migrate backwards and comes into contact and eventually fuses with the dorsal pancreatic bud during the sixth week of development (reference 2).[well established][VHOG] The ventral pancreatic bud becomes the head and uncinate process, and comes from the hepatic diverticulum[WP] @@ -357196,26 +354954,24 @@ Classes for population already exist in IDO ('organism population', I ventral pancreatic bud http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png + + + + + + + + - - - - - - + EHDAA2 - - - - - - + PMID:16417468 WP @@ -357838,12 +355594,6 @@ Classes for population already exist in IDO ('organism population', I posterior stroma of cornea - - - - - lexical - @@ -358052,12 +355802,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A transitional population of migrating mesenchymal cells that derive from somites and that will become dermal cells. Not to be confused with 'dermatome segment of skin'. AAO:0011028 @@ -358084,6 +355829,10 @@ Classes for population already exist in IDO ('organism population', I dermatome http://upload.wikimedia.org/wikipedia/commons/f/f3/Gray64.png + + + + @@ -358093,12 +355842,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2-abduced @@ -358224,12 +355968,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -358256,15 +355995,14 @@ Classes for population already exist in IDO ('organism population', I biliary ductule + + + + - - - - - - + BTO @@ -358349,12 +356087,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium. consider merging with 'ventricular zone'; note that the MA class probably does not belong here, as this is an embryonic structure The layer of undifferentiated, proliferating cells that line the neural tube lumen @@ -358372,6 +356105,10 @@ Classes for population already exist in IDO ('organism population', I neural tube ventricular layer + + + + @@ -358381,12 +356118,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + NCBIBook:NBK10047 @@ -358447,12 +356179,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -358476,6 +356203,10 @@ Classes for population already exist in IDO ('organism population', I neural tube mantle layer + + + + @@ -358485,12 +356216,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + by division NCBIBook:NBK10047 @@ -358528,12 +356254,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -358550,15 +356271,14 @@ Classes for population already exist in IDO ('organism population', I neural tube marginal layer + + + + - - - - - - + forms from axons @@ -358600,12 +356320,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -358630,15 +356345,14 @@ Classes for population already exist in IDO ('organism population', I neural tube basal plate + + + + - - - - - - + Shh Swenson @@ -358754,24 +356468,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + The central area of the two limbs of a horseshoe-shaped mesenchymal swelling that lie medial to the olfactory placode or pit in the future nasal region of the embryo; it joins with the ipsilateral maxillary prominence in the formation of half of the upper jaw, and the nasal tip and philtrum of the upper lip develop from it. Fusion of right and left medial nasal processes forms a primary palate rostrally and the nasal septum caudally. The incisive bone, including upper incisor teeth and the rostral up- per lip, are derived from the primary palate. The nasal septum consists of bone, cartilage, and a patch of soft tissue membrane that separates right & left halves of the nasal cavity. EHDAA2:0001076 @@ -358792,26 +356496,24 @@ Classes for population already exist in IDO ('organism population', I medial nasal prominence http://upload.wikimedia.org/wikipedia/commons/8/85/Gray45.png + + + + + + + + - - - - - - + EHDAA2 - - - - - - + Wikipedia @@ -359602,12 +357304,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A myocardium trabecular layer that is part of a cardiac ventricle. TODO - check FMA FMA:83511 @@ -359621,15 +357318,14 @@ Classes for population already exist in IDO ('organism population', I trabecular layer of ventricle + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -359664,24 +357360,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -359714,37 +357395,34 @@ Classes for population already exist in IDO ('organism population', I optic vesicle http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray863.png + + + + + + + + + + + + - - - - - - + ZFA - - - - - - + GO-def - - - - - - + ZFA @@ -359894,18 +357572,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -359918,26 +357586,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004140 primary heart field + + + + + + + + - - - - - - + GO:0003128 - - - - - - + https://orcid.org/0000-0003-3308-6245 @@ -359996,12 +357662,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -360021,15 +357682,14 @@ Classes for population already exist in IDO ('organism population', I heart tube + + + + - - - - - - + ZFA-modified @@ -360174,18 +357834,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. the intraventricular conduction system from the bundle of His to the distal Purkinje fibers, which carries the impulse to the ventricles. HPS @@ -360196,6 +357846,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004146 His-Purkinje system + + + + + + + + @@ -360205,23 +357863,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + GO - - - - - - + PMID:12626327 PMID:21234997 github:michaelerice @@ -360396,18 +358044,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + An embryonic group of progenitor cells that forms from an outpouching of the septum transversum near the venous pole of the heart and gives rise to the epicardium. propepicardial Proepicardial clusters in Zebrafish form on the pericardial wall, adjacent to the atrioventricular (AV) junction and near the venous pole[ZFA] @@ -360419,26 +358057,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004160 proepicardium + + + + + + + + - - - - - - + todo check other taxa - - - - - - + ZFA @@ -360919,18 +358555,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A portion of smooth muscle tissue that is part of a large intestine [Automatically generated definition]. MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa EMAPA:35469 @@ -360946,26 +358572,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004220 large intestine smooth muscle + + + + + + + + - - - - - - + MA - - - - - - + consider merging @@ -361046,12 +358670,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -361088,15 +358707,14 @@ Classes for population already exist in IDO ('organism population', I intestine smooth muscle + + + + - - - - - - + consider merging @@ -362148,12 +359766,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of smooth muscle tissue that is part of a small intestine [Automatically generated definition]. MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa EMAPA:35783 @@ -362178,15 +359791,14 @@ Classes for population already exist in IDO ('organism population', I small intestine smooth muscle + + + + - - - - - - + consider merging @@ -362953,21 +360565,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -362983,15 +360587,14 @@ Classes for population already exist in IDO ('organism population', I eye muscle + + + + - - - - - - + MA @@ -363081,12 +360684,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The bilaminar epithelium formed from the myotome and dermatome. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis. Within the dermomyotome there is also a medio-lateral difference. The central region makes dermis, the mesenchymal connective tissue of the back skin. The medial region (closest to neural tube) makes epaxial muscle, and the lateral region (furthest from neural tube) makes hypaxial muscle[http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=eurekah&part=A66768]. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis.[TAO] @@ -363109,6 +360707,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004290 dermomyotome + + + + @@ -363124,12 +360726,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 ZFA @@ -363413,24 +361010,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + Outermost layer of cells in the blastodermic vesicle, which will develop into the trophoblast layer and then contact the endometrium and take part in establishing the embryo's means of nutrition. distinction between trophectoderm and trophoblast unclear/inconsistent in many sources The outer cellular layer of the mammalian blastocyst. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.750, see_Kardong_KV][VHOG] @@ -363448,6 +361035,14 @@ Classes for population already exist in IDO ('organism population', I trophectoderm + + + + + + + + @@ -363457,23 +361052,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -363876,12 +361461,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -363937,15 +361517,14 @@ Classes for population already exist in IDO ('organism population', I pharyngeal arch artery http://upload.wikimedia.org/wikipedia/commons/8/84/Gray473.png + + + + - - - - - - + ZFA @@ -364197,17 +361776,12 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP]. Acellular anatomical structure composed of collagen, Descemet's membrane is secreted as a basement membrane of the corneal endothelium. Located between the stroma and the corneal endothelium, it is approximately 0.15 micrometer thick at 6 months post-fertilization.[ZFIN] - - + + EMAPA:18804 FMA:58309 GAID:894 @@ -364234,15 +361808,14 @@ Classes for population already exist in IDO ('organism population', I Descemet's membrane https://github.com/obophenotype/uberon/issues/15 + + + + - - - - - - + Cline et al @@ -364374,12 +361947,6 @@ Classes for population already exist in IDO ('organism population', I anterior limiting lamina of cornea - - - - - lexical - @@ -365649,20 +363216,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A portion of cardiac muscle tissue that is part of a myocardium [Automatically generated definition]. Note placement of MA class based on parthood relationship EMAPA:32688 @@ -365673,15 +363232,14 @@ Classes for population already exist in IDO ('organism population', I cardiac muscle tissue of myocardium + + + + - - - - - - + MA @@ -365868,27 +363426,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of trabecula carnea cardiac muscle tissue that is part of a right ventricle [Automatically generated definition]. FMA:84429 uberon UBERON:0004525 cardiac muscle tissue of trabecula carnea of right ventricle + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -365917,27 +363469,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of trabecula carnea cardiac muscle tissue that is part of a left ventricle [Automatically generated definition]. FMA:84430 uberon UBERON:0004526 cardiac muscle tissue of trabecula carnea of left ventricle + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -366634,12 +364180,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -366673,6 +364214,10 @@ Classes for population already exist in IDO ('organism population', I liver lobule + + + + @@ -366682,12 +364227,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA MA @@ -366876,12 +364416,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -366913,15 +364448,14 @@ Classes for population already exist in IDO ('organism population', I interventricular septum membranous part + + + + - - - - - - + Wikipedia @@ -367128,18 +364662,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane. BAMS:RA EMAPA:35721 @@ -367168,27 +364692,25 @@ Classes for population already exist in IDO ('organism population', I raphe nuclei http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png + + + + + + + + - - - - - - + GO Wikipedia - - - - - - + Wikipedia @@ -367694,22 +365216,14 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -367740,12 +365254,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -367768,6 +365277,14 @@ Classes for population already exist in IDO ('organism population', I paired limb/fin + + + + + + + + @@ -367777,23 +365294,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VSAO - - - - - - + definitional @@ -367875,12 +365382,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -367902,15 +365404,14 @@ Classes for population already exist in IDO ('organism population', I pelvic appendage + + + + - - - - - - + definitional @@ -367979,12 +365480,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -368008,23 +365504,16 @@ Classes for population already exist in IDO ('organism population', I pectoral appendage + + + + - - - - - - + definitional - - - - - lexical - @@ -368252,7 +365741,7 @@ Classes for population already exist in IDO ('organism population', I A transverse unitary subdivision of the neural tube that shares a common dorsoventral structure (floor, basal, alar, and roof plates), but each having differential molecular identities and fates; they comprise the secondary prosencephalon, diencephalon (prosomeres), the midbrain (mesomeres), and the hindbrain (rhombomeres). We take the definition of neuromere from Puelles et al, although the existence of mesomeres and prosomeres may not be widely accepted A metameric segment of the central nervous system.[ZFA] - + 2009-06-18T09:00:04Z NLX:147842 TAO:0001328 @@ -368555,12 +366044,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO] EMAPA:37744 @@ -368574,6 +366058,10 @@ Classes for population already exist in IDO ('organism population', I Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from skeletal tissue + + + + @@ -368583,12 +366071,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + 2012-08-14 VSAO:0000015 VSAO @@ -368767,12 +366250,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The primitive cartilagionous skeletal structure of the fetal skull that grows to envelop the rapidly growing embyonic brain. In humans, the chondrocranium begins forming at 28 days from mesenchymal condensations and is fully formed between week 7 and 9 of fetal development. While the majority of the chondrocranium is succeeded by the bony skull in most higher vertebrates, some components do persist into adulthood.[1] In Cartilagious fishes and Agnathans, the chondrocranium persist throughout life.[2] Embryologically, the chondrocranium represent the basal cranial structure, and lay the base for the formation of the endocranium in higher vertebrates[WP]. in contrast to chondrocranium, this structure is entirely cartiliginous. In Chondricthyes this is the same as the neurocranium. FMA:76621 is an undefined fetal structure, so we assume the correct placement is here. Note that this is distinct from MA:0000317 which is the uberon:neurocranium (the part of the cranium that encloses the brain) AAO:0000094 @@ -368794,6 +366272,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004761 cartilaginous neurocranium + + + + @@ -368803,12 +366285,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + PMC1571569 @@ -368905,12 +366382,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -368926,15 +366398,14 @@ Classes for population already exist in IDO ('organism population', I skeletal element + + + + - - - - - - + VSAO @@ -369063,12 +366534,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -369107,15 +366573,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004770 articular system + + + + - - - - - - + FMA @@ -369230,12 +366695,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a respiratory system [Automatically generated definition]. EMAPA:37576 MA:0001821 @@ -369250,15 +366710,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004779 respiratory system lamina propria + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -369334,12 +366793,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a gastrointestinal system. MA:0001899 NCIT:C49299 @@ -369348,15 +366802,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004780 gastrointestinal system lamina propria + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -369391,12 +366844,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a gallbladder [Automatically generated definition]. EMAPA:35371 FMA:278594 @@ -369415,15 +366863,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004781 gallbladder lamina propria + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -370018,30 +367465,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + A mucosa that is part of a gastrointestinal system. BTO:0000546 BTO:0005568 @@ -370057,48 +367484,44 @@ Classes for population already exist in IDO ('organism population', I The gut mucosa of amphioxus has insulin-secreting cells. http://www.ncbi.nlm.nih.gov/pubmed/16417468 gastrointestinal system mucosa + + + + + + + + + + + + + + + + - - - - - - + PMID:16417468 - - - - - - + PMID:16417468 - - - - - - + PMID:16417468 - - - - - - + BTO-modified @@ -371442,12 +368865,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An endothelium of artery that is part of a respiratory system [Automatically generated definition]. EMAPA:37566 @@ -371468,15 +368886,14 @@ Classes for population already exist in IDO ('organism population', I respiratory system arterial endothelium + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -372358,12 +369775,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -372386,15 +369798,14 @@ Classes for population already exist in IDO ('organism population', I splanchnopleure http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png + + + + - - - - - - + EHDAA2 @@ -372422,12 +369833,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -372450,15 +369856,14 @@ Classes for population already exist in IDO ('organism population', I somatopleure http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png + + + + - - - - - - + EHDAA2 @@ -373006,18 +370411,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + EHDAA2:0000171 EMAPA:16561 EMAPA_RETIRED:16565 @@ -373028,6 +370423,14 @@ Classes for population already exist in IDO ('organism population', I biliary bud http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png + + + + + + + + @@ -373037,23 +370440,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2-modified @@ -374614,12 +372007,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A mucosa that is part of a pyloric antrum [Automatically generated definition]. BTO:0004107 FMA:17055 @@ -374652,15 +372040,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004997 mucosa of pyloric antrum + + + + - - - - - - + BTO @@ -376304,26 +373691,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Missing definition for term UBERON:0005064. Please replace it using linked reference. uberon UBERON:0005064 left ventricular trabecular myocardium + + + + - - - - - - + GO @@ -376350,26 +373731,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Missing definition for term UBERON:0005066. Please replace it using linked reference. uberon UBERON:0005066 right ventricular trabecular myocardium + + + + - - - - - - + GO @@ -376748,8 +374123,8 @@ Classes for population already exist in IDO ('organism population', I The functional tissue of the central nervous system consisting of neurons and glial cells. - - + + CNS parenchyma central nervous system parenchyma parenchyma of CNS @@ -377348,12 +374723,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An external ectoderm that is part of a optic eminence [Automatically generated definition]. EMAPA:16539 RETIRED_EHDAA2:0001311 @@ -377362,15 +374732,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005216 optic eminence surface ectoderm + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -377819,12 +375188,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells. Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)[TAO] EFO:0003492 @@ -377846,15 +375210,14 @@ Classes for population already exist in IDO ('organism population', I head mesenchyme + + + + - - - - - - + EHDAA2 @@ -377921,12 +375284,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -377942,15 +375300,14 @@ Classes for population already exist in IDO ('organism population', I trunk mesenchyme + + + + - - - - - - + EHDAA2 @@ -377972,12 +375329,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP]. The posterior of the two brain vesicles formed by specialization of the rhombencephalon in the developing embryo, it comprises the medulla oblongata. [TFD][VHOG] @@ -378002,15 +375354,14 @@ Classes for population already exist in IDO ('organism population', I myelencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg + + + + - - - - - - + definitional @@ -378988,12 +376339,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An apical ectodermal ridge that is part of a pectoral appendage bud. An ectodermal thickening at the end of the forelimb bud in the developing embryo. [TFD][VHOG] Apical ectodermal ridge that is part of the pectoral fin bud.[TAO] @@ -379020,15 +376366,14 @@ Classes for population already exist in IDO ('organism population', I pectoral appendage apical ectodermal ridge + + + + - - - - - - + EHDAA2 @@ -379146,12 +376491,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An apical ectodermal ridge that is part of a pelvic appendage bud. An ectodermal thickening at the end of the hindlimb bud in the developing embryo. [TFD][VHOG] Apical ectodermal ridge that is part of the pelvic fin bud.[TAO] @@ -379174,15 +376514,14 @@ Classes for population already exist in IDO ('organism population', I pelvic appendage apical ectodermal ridge + + + + - - - - - - + EHDAA2 @@ -379508,12 +376847,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea. TAO:0002188 ZFA:0001688 @@ -379521,6 +376855,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005427 corneal primordium + + + + @@ -379536,12 +376874,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -379641,12 +376974,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The dilated structure that is lined by endothelial cells and located at the arterial pole of the heart just above (distal to) the truncus arteriosus in mammalian embryos; it is the primordial vascular channel from which the aortic arches (and eventually the dorsal aortae) arise; the aortic sac is homologous to the ventral aorta of gill-bearing vertebrates. the merged ventral aortae of the embryo which supplies blood to the aortic arches[TMD][http://medical-dictionary.thefreedictionary.com/aortic+sac]. EHDAA2:0004145 @@ -379661,6 +376989,10 @@ Classes for population already exist in IDO ('organism population', I aortic sac + + + + @@ -379670,12 +377002,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -380003,12 +377330,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A longitudinal groove in the neural tube wall that divides the neural tube into dorsal (alar) and ventral (basal) halves (dorsal receives input from sensory neurons, ventral effects motor functions); stretches from the mesencephalon caudad[TMD]. sulcus limitans BAMS:slim @@ -380019,15 +377341,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005478 sulcus limitans of neural tube + + + + - - - - - - + EHDAA2 @@ -380295,12 +377616,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -380319,15 +377635,14 @@ Classes for population already exist in IDO ('organism population', I primitive heart tube + + + + - - - - - - + ZFA @@ -380409,12 +377724,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Cranial neural crest which gives rise to the trigeminal ganglion. todo - compare ZFA and EHDAA2 representation We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG] @@ -380431,6 +377741,10 @@ Classes for population already exist in IDO ('organism population', I trigeminal neural crest + + + + @@ -380446,12 +377760,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -380478,12 +377787,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -380512,6 +377816,10 @@ Classes for population already exist in IDO ('organism population', I gonad primordium + + + + @@ -380521,12 +377829,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -380584,28 +377887,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - + + Somite located in the head region, caudal to the otic vesicle. in humans this includes somites 1-4 They provide the epaxial and hypaxial muscles of the neck, the pharyngeal and laryngeal muscles that develop in the caudal branchial arches and the musculature of the tongue. Despite their localisation in the head, myogenic precursors from occipital somites essentially follow the trunk programmes (E. H. Walters and S. D., unpublished). during evolution, have been secondarily incorporated into the head (Gans and Northcutt, 1983) @@ -380619,26 +377909,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005594 head somite + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -380686,12 +377974,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -380711,6 +377994,10 @@ Classes for population already exist in IDO ('organism population', I lung primordium + + + + @@ -380720,12 +378007,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + XAO @@ -380798,18 +378080,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The portion of mesentery attached to the greater curvature of the stomach is named the dorsal mesentery (or dorsal mesogastrium, when referring to the portion at the stomach), and the part which suspends the colon is termed the mesocolon. The dorsal mesogastrium develops into the greater omentum. The dorsal sheet of the primitive mesentery that encloses the stomach. The greater omentum develops from the dorsal mesogastrium. [TFD][VHOG] EHDAA2:0000416 @@ -380825,6 +378097,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005602 dorsal mesogastrium + + + + + + + + @@ -380834,23 +378114,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -380888,18 +378158,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + EMAPA:16844 MA:0001636 VHOG:0000215 @@ -380909,26 +378169,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005604 extrahepatic part of hepatic duct + + + + + + + + - - - - - - + MA - - - - - - + MA @@ -382039,12 +379297,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0000474 EMAPA:31862 EMAPA:31863 @@ -382056,6 +379309,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005728 extraembryonic mesoderm + + + + @@ -382065,12 +379322,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -382208,12 +379460,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -382229,15 +379476,14 @@ Classes for population already exist in IDO ('organism population', I paired limb/fin field + + + + - - - - - - + ISBN:9780878932504 ZFA-inferred @@ -383029,12 +380275,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -383044,6 +380285,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005856 developing mesenchymal condensation + + + + @@ -383059,12 +380304,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO-modified-relation @@ -383086,12 +380326,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -383112,6 +380347,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005863 cartilaginous condensation + + + + @@ -383121,12 +380360,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO @@ -383177,12 +380411,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -383204,15 +380433,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005865 pre-muscle condensation + + + + - - - - - - + AEO @@ -383223,12 +380451,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -383248,6 +380471,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005866 pre-cartilage condensation + + + + @@ -383257,12 +380484,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO @@ -383518,7 +380740,7 @@ Classes for population already exist in IDO ('organism population', I Organ with organ cavity, which has as parts a serous membrane and a serous cavity . Examples: pleural sac, pericardial sac, tendon sheath, bursa.[FMA]. - + FMA:9689 SCTID:362890006 uberon @@ -383633,7 +380855,7 @@ Classes for population already exist in IDO ('organism population', I Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO] - + AAO:0000963 EMAPA:17214 EMAPA:18043 @@ -383694,12 +380916,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + trabecula trabecular cartilage EFO:0003677 @@ -383711,6 +380928,10 @@ Classes for population already exist in IDO ('organism population', I neurocranial trabecula + + + + @@ -383720,12 +380941,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -383827,12 +381043,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Anteriosuperior, smooth-walled portion of the cavity of the right ventricle, beginning at the supraventricular crest and terminating in the pulmonary trunk. infundibulum EMAPA:37926 @@ -383855,15 +381066,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005953 outflow part of right ventricle + + + + - - - - - - + PMID:17276708 @@ -384345,12 +381555,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -384370,15 +381575,14 @@ Classes for population already exist in IDO ('organism population', I atrium myocardial trabecula + + + + - - - - - - + ZFA @@ -384430,12 +381634,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -384459,15 +381658,14 @@ Classes for population already exist in IDO ('organism population', I atrioventricular septum + + + + - - - - - - + PMID:15797462 Wikipedia @@ -384514,12 +381712,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The paired arteries that carry blood to the yolk sac from the dorsal aorta. EHDAA2:0002208 EMAPA:16207 @@ -384531,15 +381724,14 @@ Classes for population already exist in IDO ('organism population', I vitelline artery http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png + + + + - - - - - - + ventral branch @@ -384811,12 +382003,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -384847,15 +382034,14 @@ Classes for population already exist in IDO ('organism population', I cervical region of vertebral column + + + + - - - - - - + FMA @@ -384933,12 +382119,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -384972,15 +382153,14 @@ Classes for population already exist in IDO ('organism population', I thoracic region of vertebral column + + + + - - - - - - + FMA @@ -385161,12 +382341,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -385186,15 +382361,14 @@ Classes for population already exist in IDO ('organism population', I subdivision of vertebral column + + + + - - - - - - + FMA @@ -385238,12 +382412,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -385276,15 +382445,14 @@ Classes for population already exist in IDO ('organism population', I aortico-pulmonary spiral septum http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray470.png + + + + - - - - - - + PMID:6844926 Wikipedia @@ -385340,12 +382508,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -385389,15 +382552,14 @@ Classes for population already exist in IDO ('organism population', I buccopharyngeal membrane http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png + + + + - - - - - - + EHDAA2 @@ -385471,24 +382633,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -385505,37 +382652,34 @@ Classes for population already exist in IDO ('organism population', I ethmoid bone primordium + + + + + + + + + + + + - - - - - - + FMA - - - - - - + AAO - - - - - - + EHDAA2 @@ -385745,18 +382889,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -385775,26 +382909,24 @@ Classes for population already exist in IDO ('organism population', I future central tendon + + + + + + + + - - - - - - + EHDAA2 - - - - - - + mesenchyme cranial part Wikipedia @@ -385830,12 +382962,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -385859,15 +382986,14 @@ Classes for population already exist in IDO ('organism population', I future spinal cord + + + + - - - - - - + EHDAA2 @@ -385913,18 +383039,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -385942,26 +383058,24 @@ Classes for population already exist in IDO ('organism population', I gallbladder primordium + + + + + + + + - - - - - - + EMAPA - - - - - - + EHDAA2 @@ -386037,12 +383151,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -386057,6 +383166,10 @@ Classes for population already exist in IDO ('organism population', I notochordal plate + + + + @@ -386066,12 +383179,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -386109,12 +383217,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -386131,15 +383234,14 @@ Classes for population already exist in IDO ('organism population', I The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process + + + + - - - - - - + EHDAA2 @@ -386218,12 +383320,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -386256,6 +383353,10 @@ Classes for population already exist in IDO ('organism population', I pleuroperitoneal canal + + + + @@ -386265,12 +383366,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -386302,18 +383398,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -386344,26 +383430,24 @@ Classes for population already exist in IDO ('organism population', I The embryonic ventricle or primitive ventricle of the developing heart gives rise to the trabeculated parts of the left and right ventricles. In contrast, the smooth parts of the left and right ventricles originate from the embryological bulbus cordis. The primitive ventricle becomes divided by a septum, the septum inferius or ventricular septum, which grows upward from the lower part of the ventricle, its position being indicated on the surface of the heart by a furrow. Its dorsal part increases more rapidly than its ventral portion, and fuses with the dorsal part of the septum intermedium. For a time an interventricular foramen exists above its ventral portion, but this foramen is ultimately closed by the fusion of the aortic septum with the ventricular septum[WP] future cardiac ventricle + + + + + + + + - - - - - - + ZFA - - - - - - + EMAPA @@ -386413,18 +383497,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A dense syncitial-like mesenchymal thickening in the dorsal mesogastrium[ISBN]. the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing spleen[MP]. check difference between splenic and spleen in EMAPA; note that in EHDAA2 the class 'spleen' refers to the mesenchyme UBERON:0009750 @@ -386441,6 +383515,14 @@ Classes for population already exist in IDO ('organism population', I spleen primordium + + + + + + + + @@ -386450,23 +383532,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2-modified - - - - - - + XAO @@ -386525,12 +383597,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA:924 EMAPA:16663 RETIRED_EHDAA2:0002089 @@ -386542,15 +383609,14 @@ Classes for population already exist in IDO ('organism population', I See: https://github.com/obophenotype/mouse-anatomy-ontology/issues/13 and https://github.com/obophenotype/uberon/issues/693 -- consider merging into trigeminal ganglion, as this complicates the model future trigeminal ganglion + + + + - - - - - - + EHDAA2 @@ -387885,24 +384951,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + The three-lobed cloverleaf-shaped aponeurosis situated at the center of the diaphragm; the central tendon is fused with the fibrous pericardium that provides attachment for the muscle fibers. In mammals, the diaphragm muscle divides the thoracoabdominal cavity into thorax and abdomen. In most mammals, the diaphragm is a flat sheet with muscle fibers radiating outward from a central tendon, and the diaphragm's apposition to the cranial surface of the liver gives it a dome-shape. Muscle fiber contraction reduces the curvature of the dome, thereby expanding the thoracic cavity and aspirating air into the lungs.[well established][VHOG] EMAPA:17702 @@ -387920,26 +384976,24 @@ Classes for population already exist in IDO ('organism population', I central tendon of diaphragm + + + + + + + + - - - - - - + VHOG - - - - - - + definitional @@ -388420,12 +385474,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -388446,6 +385495,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0006815 areolar connective tissue + + + + @@ -388455,12 +385508,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -388900,12 +385948,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A head mesenchyme that develops_from a mesoderm. merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme AAO:0011051 @@ -388933,6 +385976,10 @@ Classes for population already exist in IDO ('organism population', I head mesenchyme from mesoderm + + + + @@ -388942,12 +385989,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 XAO @@ -389675,12 +386717,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The stroma of the ovary is a peculiar soft tissue, abundantly supplied with blood vessels, consisting for the most part of spindle-shaped cells with a small amount of ordinary connective tissue. These cells have been regarded by some anatomists as unstriped muscle cells, which, indeed, they most resemble; by others as connective-tissue cells. On the surface of the organ this tissue is much condensed, and forms a layer composed of short connective-tissue fibers, with fusiform cells between them. The stroma of the ovary may contain interstitial cells resembling those of the testis. CALOHA:TS-1246 @@ -389702,15 +386739,14 @@ Classes for population already exist in IDO ('organism population', I ovary stroma + + + + - - - - - - + FMA @@ -390132,12 +387168,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Cranial neural crest that migrates into the mandibular arch. TAO:0007064 XAO:0000024 @@ -390146,6 +387177,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007098 mandibular neural crest + + + + @@ -390155,12 +387190,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -390179,10 +387209,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -390193,12 +387220,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -390213,15 +387235,14 @@ Classes for population already exist in IDO ('organism population', I Gene notes: Bmp, Nkx, Gata primary circulatory organ + + + + - - - - - - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -390934,12 +387955,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + relationship to Meckel's cartilage to be added Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG] EHDAA2:0000031 @@ -390953,15 +387969,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007237 1st arch mandibular component + + + + - - - - - - + EHDAA2 @@ -390999,12 +388014,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + relationship to palatoquadrate to be added Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG] EHDAA2:0000038 @@ -391015,15 +388025,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007238 1st arch maxillary component + + + + - - - - - - + EHDAA2 @@ -391121,12 +388130,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A tunica adventitia that is part of a artery. EMAPA:36295 EV:0100030 @@ -391138,15 +388142,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007240 tunica adventitia of artery + + + + - - - - - - + FMA @@ -391592,12 +388595,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -391618,15 +388616,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007272 pectoral appendage skeleton + + + + - - - - - - + VSAO @@ -391661,12 +388658,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -391684,15 +388676,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007273 pelvic appendage skeleton + + + + - - - - - - + VSAO @@ -391725,18 +388716,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -391763,26 +388744,24 @@ Classes for population already exist in IDO ('organism population', I presumptive hindbrain + + + + + + + + - - - - - - + XAO-abduced - - - - - - + cjm @@ -391839,12 +388818,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -391858,15 +388832,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007278 presumptive sinus venosus + + + + - - - - - - + ZFA @@ -391952,12 +388925,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -391976,15 +388944,14 @@ Classes for population already exist in IDO ('organism population', I presumptive midbrain hindbrain boundary + + + + - - - - - - + ZFA @@ -392023,12 +388990,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -392045,15 +389007,14 @@ Classes for population already exist in IDO ('organism population', I presumptive segmental plate + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -392152,21 +389113,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - + @@ -392192,24 +389139,23 @@ Classes for population already exist in IDO ('organism population', I presumptive paraxial mesoderm + + + + + + + + + + + + + - - - - - - - - - - - - - - - + https://github.com/obophenotype/uberon/issues/1277 @@ -392551,12 +389497,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -392602,6 +389543,10 @@ Classes for population already exist in IDO ('organism population', I pancreatic duct http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png + + + + @@ -392611,12 +389556,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -392751,12 +389691,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -392783,15 +389718,14 @@ Classes for population already exist in IDO ('organism population', I outer epithelium + + + + - - - - - - + Wikipedia:Epidermis_(zoology) @@ -393393,12 +390327,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -393406,6 +390335,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007524 dense mesenchyme tissue + + + + @@ -393415,12 +390348,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO @@ -393559,12 +390487,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -393584,15 +390507,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007616 layer of synovial tissue + + + + - - - - - - + BTO @@ -393793,12 +390715,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -393824,6 +390741,10 @@ Classes for population already exist in IDO ('organism population', I trigeminal nuclear complex http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png + + + + @@ -393833,12 +390754,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -394008,12 +390924,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EFO:0003626 EHDAA2:0001457 EHDAA:962 @@ -394032,15 +390943,14 @@ Classes for population already exist in IDO ('organism population', I early pharyngeal endoderm http://dev.biologists.org/content/128/22/4573.full + + + + - - - - - - + cjm @@ -394284,12 +391194,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -394308,15 +391213,14 @@ Classes for population already exist in IDO ('organism population', I vascular system + + + + - - - - - - + MA @@ -394363,9 +391267,9 @@ Classes for population already exist in IDO ('organism population', I Adipose tissue that is located in the abdominal region. This includes any subcutaneous fat, visceral fat or encapsulated adipose tissue depots. - - - + + + CALOHA:TS-0002 EFO:0003771 uberon @@ -394521,12 +391425,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -394578,15 +391477,14 @@ Classes for population already exist in IDO ('organism population', I post-anal tail + + + + - - - - - - + possible exception in hemichordates cjm @@ -394751,12 +391649,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesentery that is located in the peritoneum. FMA:20570 TAO:0005129 @@ -394766,15 +391659,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007826 peritoneal mesentery + + + + - - - - - - + FMA @@ -395141,12 +392033,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -395189,15 +392076,14 @@ Classes for population already exist in IDO ('organism population', I pelvic girdle skeleton http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png + + + + - - - - - - + PMID:21455939 @@ -395362,18 +392248,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -395399,6 +392275,14 @@ Classes for population already exist in IDO ('organism population', I cartilage element + + + + + + + + @@ -395408,23 +392292,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VSAO - - - - - - + VSAO @@ -395634,20 +392508,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A bone that is part of a craniocervical region. EMAPA:37245 MA:0000569 @@ -395657,6 +392523,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007914 bone of craniocervical region + + + + @@ -395666,12 +392536,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -396038,20 +392903,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Musculature system of the pharyngeal and head regions. in MA this is restricted to skeletal muscles EMAPA:37259 @@ -396065,6 +392922,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008229 craniocervical region musculature + + + + @@ -396074,12 +392935,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -396126,18 +392982,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Subdivision of thorax, which in humans is the posterior part of the thorax and is demarcated from the chest by the external surface of the posterolateral part of the rib cage and the anterior surface of the thoracic vertebral column; together with the chest, it constitutes the thorax. EMAPA:37234 FMA:24217 @@ -396153,27 +392999,25 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008231 dorsal thoracic segment of trunk + + + + + + + + - - - - - - + FMA MA - - - - - - + FMA @@ -396234,21 +393078,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A muscle of back that is part of a dorsal thoracic segment of trunk. EMAPA:37261 MA:0000508 @@ -396257,6 +393093,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008243 upper back muscle + + + + @@ -396266,12 +393106,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -396414,12 +393249,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of a duodenum. CALOHA:TS-2087 @@ -396433,15 +393263,14 @@ Classes for population already exist in IDO ('organism population', I duodenal epithelium + + + + - - - - - - + FMA @@ -396542,10 +393371,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -396557,12 +393383,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An embryonic structure that is derived from the inner cell mass and lies above the hypoblast and gives rise to the three primary germ layers. EHDAA2:0000444 EHDAA:42 @@ -396578,15 +393399,14 @@ Classes for population already exist in IDO ('organism population', I The epiblast cells (appearing on day 8 of human embryonic development) make up a columnar epithelium with dense microvilli on the apical surface. During gastrulation, the epiblast cells undergo epithelial-to-mesenchymal transition and delaminate to become the loose mesenchyme of the primitive streak. The epiblast is present in postimplantation mouse embryos between E5.5-E7.5. inner cell mass derived epiblast + + + + - - - - - - + Wikipedia @@ -396738,12 +393558,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -396758,6 +393573,10 @@ Classes for population already exist in IDO ('organism population', I neural tube derived brain https://github.com/obophenotype/uberon/issues/338 + + + + @@ -396767,12 +393586,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -396793,18 +393607,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + An out-pocket of thickened ventral foregut epithelium adjacent to the developing heart. Constitutes the first morphological sign of the embryonic liver. The anterior portion of the hepatic diverticulum gives rise to the liver and intrahepatic biliary tree, while the posterior portion forms the gall bladder and extrahepatic bile ducts. in mice, the hepatic diverticulum forms by E9 and expands into an obvious liver bud by E10 The caudal part of the septum transversum is invaded by the hepatic diverticulum which divides within it to form the liver and thus gives rise to the ventral mesentery of the foregut. @@ -396823,6 +393627,14 @@ Classes for population already exist in IDO ('organism population', I hepatic diverticulum http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png + + + + + + + + @@ -396832,24 +393644,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + caudal part EHDAA2 - - - - - - + EHDAA2 @@ -396888,17 +393690,16 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + BTO:0001642 uberon UBERON:0008836 liver bud + + + + @@ -396908,12 +393709,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + http://www.stembook.org/node/512 @@ -396994,12 +393790,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -397026,15 +393817,14 @@ Classes for population already exist in IDO ('organism population', I stomach muscularis externa + + + + - - - - - - + MA-abduced @@ -397080,12 +393870,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -397117,6 +393902,10 @@ Classes for population already exist in IDO ('organism population', I pyloric canal https://upload.wikimedia.org/wikipedia/commons/3/33/Illu_stomach.jpg + + + + @@ -397126,12 +393915,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -397185,12 +393969,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -397215,6 +393994,10 @@ Classes for population already exist in IDO ('organism population', I pyloric gastric gland http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray1054.png + + + + @@ -397224,12 +394007,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia:Tubular_gland @@ -397289,12 +394067,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -397327,15 +394100,14 @@ Classes for population already exist in IDO ('organism population', I hypodermis skeletal muscle layer + + + + - - - - - - + MP-def @@ -397436,18 +394208,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Subdivision of endoskeleton derived from pharyngeal arches. @@ -397480,26 +394242,24 @@ Classes for population already exist in IDO ('organism population', I splanchnocranium http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg + + + + + + + + - - - - - - + https://github.com/obophenotype/uberon/issues/83 - - - - - - + redundant Grays PMID:11237469 @@ -397617,21 +394377,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Skeletal element that forms superficially in the organism, usually in association with the ectoderm[VSAO]. Intramembranous bone that forms superficially in the organism.[TAO] other AOs are not yet in sync with this classification @@ -397646,6 +394398,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008907 dermal bone + + + + @@ -397661,12 +394417,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VSAO @@ -397778,21 +394529,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A parenchyma that is part of a lung. EMAPA:35522 FMA:27360 @@ -397805,6 +394548,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008946 lung parenchyma + + + + @@ -397814,12 +394561,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -398283,21 +395025,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Cranial ganglion which develops from an epibranchial placode. BTO:0006250 TAO:0001555 @@ -398308,6 +395042,10 @@ Classes for population already exist in IDO ('organism population', I Epibranchial ganglia orchestrate the development of the cranial neurogenic crest epibranchial ganglion + + + + @@ -398317,12 +395055,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + NCBIBook:NBK53175 @@ -398374,18 +395107,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Endocardium that is part of the right atrium. EHDAA2:0000274 FMA:7281 @@ -398399,26 +395122,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009129 right atrium endocardium + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -398583,12 +395304,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -398605,15 +395321,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009142 entire embryonic mesenchyme + + + + - - - - - - + EHDAA2 @@ -398629,12 +395344,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EMAPA:16549 RETIRED_EHDAA2:0001454 pharyngeal region @@ -398642,15 +395352,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009145 pharyngeal region of foregut + + + + - - - - - - + EHDAA2 @@ -398681,18 +395390,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -398706,6 +395405,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009191 sphenoid bone pre-cartilage condensation + + + + + + + + @@ -398721,23 +395428,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -398834,20 +395531,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Mesenchyme that is part of a medial nasal prominence. EHDAA2:0001077 EMAPA:16810 @@ -398856,15 +395545,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009204 medial nasal process mesenchyme + + + + - - - - - - + EHDAA2 @@ -399099,12 +395787,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of mesenchymal tissue associated with an individual pharyngeal arch. this represents a part of the entire arch mesenchyme (UBERON:0010046), and is therefore a superclass of the individual arch mesenchyme classes. Alternate definition: primordial embryonic connective tissue associated with the branchial arches, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to facial and cranial nerve-associated structures. EMAPA:32755 @@ -399116,6 +395799,10 @@ Classes for population already exist in IDO ('organism population', I pharyngeal arch mesenchymal region + + + + @@ -399125,12 +395812,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -399177,24 +395859,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + An epithelium that is part of a foregut-midgut junction. EHDAA2:0000573 EMAPA:16564 @@ -399203,26 +395875,24 @@ Classes for population already exist in IDO ('organism population', I epithelium of foregut-midgut junction + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -399593,12 +396263,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A submucosa that is part of a intestine. FMA:15696 submucosa of intestine @@ -399606,15 +396271,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009566 intestinal submucosa + + + + - - - - - - + FMA @@ -399828,12 +396492,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A sulcus limitans of neural tube that is part of a future medulla oblongata. EHDAA2:0001100 EMAPA:17561 @@ -399841,15 +396500,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009576 medulla oblongata sulcus limitans + + + + - - - - - - + EHDAA2 @@ -400025,20 +396683,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Mesenchyme that is part of a 1st arch mandibular component. UBERON:0010043 EHDAA2:0000034 @@ -400051,15 +396701,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009584 1st arch mandibular mesenchyme + + + + - - - - - - + EMAPA @@ -400175,24 +396824,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - + - - - - - - + @@ -400206,31 +396840,29 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009611 midbrain neural plate + + + + + + + + + + + + + - - - - - - - - - - - + ZFA - - - - - - + ZFA @@ -400245,24 +396877,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - + - - - - - - + @@ -400276,31 +396893,29 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009614 hindbrain neural plate + + + + + + + + + + + + + - - - - - - - - - - - + ZFA - - - - - - + ZFA @@ -400316,18 +396931,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + TODO - developmental relationships for lines TAO:0007044 ZFA:0007044 @@ -400337,26 +396942,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009615 midbrain hindbrain boundary neural plate + + + + + + + + - - - - - - + ZFA - - - - - - + https://github.com/obophenotype/uberon/issues/438 Bgee:AN @@ -400390,24 +396993,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + @@ -400432,26 +397025,24 @@ Classes for population already exist in IDO ('organism population', I presumptive midbrain + + + + + + + + - - - - - - + ZFA - - - - - - + ZFA @@ -400497,12 +397088,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles. A major contributor to neurocranium [PMID:16313393] EHDAA2:0000736 @@ -400519,15 +397105,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009617 head paraxial mesoderm + + + + - - - - - - + EHDAA2 @@ -400580,12 +397165,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -400593,15 +397173,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009618 trunk paraxial mesoderm + + + + - - - - - - + EHDAA2 @@ -400787,12 +397366,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004566 EMAPA:32911 MA:0003203 @@ -400803,15 +397377,14 @@ Classes for population already exist in IDO ('organism population', I gut mesentery https://github.com/obophenotype/uberon/issues/509 + + + + - - - - - - + EHDAA2 @@ -400899,18 +397472,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -400927,26 +397490,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009670 rectal lumen + + + + + + + + - - - - - - + cjm - - - - - - + EHDAA2 @@ -400970,24 +397531,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + EHDAA2:0001371 uberon @@ -400997,6 +397543,18 @@ Classes for population already exist in IDO ('organism population', I dorsal pancreas + + + + + + + + + + + + @@ -401006,34 +397564,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 - - - - - - + cjm @@ -401045,24 +397588,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + EHDAA2:0001393 uberon @@ -401072,6 +397600,18 @@ Classes for population already exist in IDO ('organism population', I ventral pancreas + + + + + + + + + + + + @@ -401081,34 +397621,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 - - - - - - + cjm @@ -401135,18 +397660,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Any endocardium that is part of the right ventricle of the heart. Endocardium of ventricle which is continuous tricuspid valve, pulmonary valve and with the tunica intima of the pulmonary trunk. EHDAA2:0002188 @@ -401163,26 +397678,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009712 endocardium of right ventricle + + + + + + + + - - - - - - + EHDAA2 - - - - - - + FMA @@ -401245,12 +397758,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any endocardium that is part of the left ventricle of the heart. Endocardium of ventricle which is continuous with mitral valve, aortic valve, atrioventricular septum and the tunica intima of the aorta. EHDAA2:0002182 @@ -401266,15 +397774,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009713 endocardium of left ventricle + + + + - - - - - - + FMA @@ -401360,12 +397867,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -401380,15 +397882,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009722 entire pharyngeal arch endoderm + + + + - - - - - - + EHDAA2 @@ -401545,12 +398046,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -401563,12 +398059,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A serous sac that has the pleura and the pleural cavity as parts. despite its name the class EHDAA2:0004737 is not a true cavity, it corresponds to what we call the sac EHDAA2:0004737 @@ -401579,26 +398070,24 @@ Classes for population already exist in IDO ('organism population', I pleural sac + + + + + + + + - - - - - - + FMA - - - - - - + FMA-abduced-lr @@ -401713,18 +398202,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + An epithelium that is part of a embryonic cloaca. cloacal epithelium EHDAA2:0004585 @@ -401732,26 +398211,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009846 embryonic cloacal epithelium + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -401940,12 +398417,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EFO:0003704 TAO:0005041 ZFA:0005041 @@ -401955,15 +398427,14 @@ Classes for population already exist in IDO ('organism population', I anterior lateral plate mesoderm + + + + - - - - - - + ZFA @@ -401982,24 +398453,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -402019,37 +398475,34 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009889 secondary heart field + + + + + + + + + + + + - - - - - - + GO:0003129 - - - - - - + PMID:17276708 - - - - - - + PMID:17276708 @@ -402218,18 +398671,17 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0001315 EHDAA:1122 uberon UBERON:0009920 optic neural crest + + + + @@ -402239,12 +398691,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -402511,12 +398958,6 @@ Classes for population already exist in IDO ('organism population', I multicellular anatomical structure - - - - - CARO - @@ -402766,18 +399207,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The sum total of mesenchymal tissue in the pharyngeal arch region. Pharyngeal mesenchyme is undifferentiated, loose connective tissue derived mostly from mesoderm, and also contains ectodermally derived neural crest cells. EHDAA2:0001459 EMAPA:16550 @@ -402789,6 +399220,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010046 entire pharyngeal arch associated mesenchyme + + + + + + + + @@ -402798,23 +399237,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + cjm @@ -402996,24 +399425,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -403027,37 +399441,34 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010083 future dermis + + + + + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 - - - - - - + XAO @@ -403084,24 +399495,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -403114,37 +399510,34 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010084 future diaphragm + + + + + + + + + + + + - - - - - - + EHDAA2 - - - - - - + PMID:23586979 - - - - - - + PMID:23586979 @@ -403430,12 +399823,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403453,15 +399841,14 @@ Classes for population already exist in IDO ('organism population', I post-anal tail tip + + + + - - - - - - + MA @@ -403570,12 +399957,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403592,6 +399974,10 @@ Classes for population already exist in IDO ('organism population', I pair of dorsal aortae + + + + @@ -403601,12 +399987,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -403629,12 +400010,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403646,15 +400022,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010191 aortic system + + + + - - - - - - + Wikipedia @@ -403837,12 +400212,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403860,15 +400230,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010227 future cardiac atrium + + + + - - - - - - + ZFA @@ -403903,12 +400272,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403933,15 +400297,14 @@ Classes for population already exist in IDO ('organism population', I eyeball of camera-type eye + + + + - - - - - - + FMA @@ -404027,10 +400390,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -404040,18 +400400,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -404064,6 +400414,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010252 1st arch mandibular mesenchyme from neural crest + + + + + + + + @@ -404073,23 +400431,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -404108,10 +400456,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -404121,44 +400466,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a 1st arch maxillary mesenchyme. EHDAA2:0000044 uberon UBERON:0010253 1st arch maxillary mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -404177,10 +400510,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -404191,18 +400521,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a 4th arch mesenchyme. In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG] EHDAA2:0000098 @@ -404217,26 +400537,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010256 4th arch mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -404277,10 +400595,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -404291,18 +400606,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a 6th arch mesenchyme. EHDAA2:0004077 neural crest derived arch 6 mesenchyme @@ -404312,26 +400617,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010257 6th arch mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -404358,12 +400661,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -404376,15 +400674,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010258 mesenchyme from rhombencephalic neural crest + + + + - - - - - - + EHDAA2 @@ -404496,18 +400793,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. DHBA:12322 EFO:0003567 @@ -404521,6 +400808,14 @@ Classes for population already exist in IDO ('organism population', I midbrain basal plate + + + + + + + + @@ -404530,23 +400825,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + ZFA @@ -404575,12 +400860,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Portion of neural tube that gives rise to the midbrain. we follow ZFA in temporally dividing midbrain NT from presumptive midbrain, but in future this may be collapsed TAO:0007039 @@ -404589,15 +400869,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010286 midbrain neural tube + + + + - - - - - - + ZFA @@ -404614,26 +400893,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia:Sclera#Histology uberon UBERON:0010291 layer of sclera + + + + - - - - - - + cjm @@ -404905,12 +401178,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -404926,15 +401194,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010312 immature eye + + + + - - - - - - + definitional @@ -405188,26 +401455,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a limb/fin bud. uberon UBERON:0010329 paired limb/fin bud mesenchyme + + + + - - - - - - + EHDAA2-abduced @@ -405242,26 +401503,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a extraembryonic membrane. uberon UBERON:0010333 extraembryonic membrane mesenchyme + + + + - - - - - - + EHDAA2-abduced @@ -405280,10 +401535,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405293,44 +401545,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a maxillary process mesenchyme. EHDAA2:0004601 uberon UBERON:0010334 maxillary process mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -405349,10 +401589,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405362,44 +401599,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a maxillary process mesenchyme. EHDAA2:0004602 uberon UBERON:0010335 maxillary process mesenchyme from head mesenchyme + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -405418,10 +401643,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405431,44 +401653,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a mandibular process mesenchyme. EHDAA2:0004603 uberon UBERON:0010336 mandibular process mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -405487,10 +401697,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405500,44 +401707,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a mandibular process mesenchyme. EHDAA2:0004604 uberon UBERON:0010337 mandibular process mesenchyme from head mesenchyme + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -405556,10 +401751,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405569,27 +401761,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch maxillary mesenchyme. EHDAA2:0000043 uberon UBERON:0010338 1st arch maxillary mesenchyme from head mesenchyme + + + + - - - - - - + EHDAA2 @@ -405608,10 +401794,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405621,27 +401804,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mandibular mesenchyme. EHDAA2:0000036 uberon UBERON:0010339 1st arch mandibular mesenchyme from head mesenchyme + + + + - - - - - - + EHDAA2 @@ -405660,10 +401837,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405674,12 +401848,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mesenchyme. EMAPA:16130 mesenchyme derived from head mesoderm of mesenchyme of 1st arch @@ -405687,15 +401856,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010341 1st arch mesenchyme from head mesenchyme + + + + - - - - - - + EMAPA @@ -405720,10 +401888,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405734,12 +401899,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 4th arch mesenchyme. EHDAA2:0000097 EMAPA:16771 @@ -405751,15 +401911,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010345 4th arch mesenchyme from head mesenchyme + + + + - - - - - - + EHDAA2 @@ -405784,10 +401943,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405798,12 +401954,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 6th arch mesenchyme. EHDAA2:0004078 head mesenchyme derived arch 6 mesenchyme @@ -405813,15 +401964,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010347 6th arch mesenchyme from head mesenchyme + + + + - - - - - - + EHDAA2 @@ -406188,12 +402338,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406208,15 +402353,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010375 pancreas dorsal primordium + + + + - - - - - - + EHDAA2 @@ -406245,12 +402389,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406265,15 +402404,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010376 pancreas ventral primordium + + + + - - - - - - + EHDAA2 @@ -406307,12 +402445,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406326,6 +402459,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010377 mesenchyme from somatopleure + + + + @@ -406335,12 +402472,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -406373,12 +402505,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406391,6 +402518,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010378 mesenchyme from splanchnopleure + + + + @@ -406400,12 +402531,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -406439,12 +402565,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406465,15 +402586,14 @@ Classes for population already exist in IDO ('organism population', I spleen trabecular artery + + + + - - - - - - + MP @@ -406886,12 +403006,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Skeletal element that forms as a replacement or substitution of another element or tissue. VSAO:0000135 XAO:0004016 @@ -406900,6 +403015,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010522 replacement element + + + + @@ -406909,12 +403028,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -406933,12 +403047,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses. MESH:D055806 TAO:0005251 @@ -406948,15 +403057,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010523 microcirculatory vessel + + + + - - - - - - + ZFA @@ -407079,7 +403187,7 @@ Classes for population already exist in IDO ('organism population', I Anatomical group that consists of the soft and skeletal tissues of the appendicular region of the body and the appendage proper.[VSAO] It is still called a complex when one of the two parts is missing (?) There are fossil fishes with only an outgrowth (no record of a girdle), including thelodonts (which have a suprabranchial fin) as well as some anaspids which have a distinctive 'paired fin' (with differing published assertions on whether it's homologous to a pec fin or pelvic fin or both or neither). There are many fishes and other vertebrates with only a girdle and no outgrowth.[VSAO] note that the FMA uses the term 'limb' to refer to the entire appendage complex (free limb plus girdle region) - + 2012-04-23T10:46:51Z EMAPA:37858 FMA:7182 @@ -407492,12 +403600,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -407520,15 +403623,14 @@ Classes for population already exist in IDO ('organism population', I bone of appendage girdle complex + + + + - - - - - - + UBERONREF:0000003 @@ -407703,12 +403805,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Muscles of the pelvic girdle, hindlimb or pelvic fin. Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO] AAO:0000218 @@ -407726,15 +403823,14 @@ Classes for population already exist in IDO ('organism population', I pelvic complex muscle + + + + - - - - - - + prolog @@ -407802,12 +403898,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle of a pectoral girdle, pectoral fin or anterior limb. the MA class belongs here, based on its current child classes Muscles of the pectoral girdle, arm, forearm, and hand (brachium, antebrachium, manus respectively).[AAO] @@ -407824,15 +403915,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010891 pectoral complex muscle + + + + - - - - - - + prolog @@ -407884,18 +403974,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -407908,6 +403988,14 @@ Classes for population already exist in IDO ('organism population', I subdivision of skeleton + + + + + + + + @@ -407917,23 +404005,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + UBERONREF:0000003 - - - - - - + VSAO @@ -407973,12 +404051,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Skeletal element that forms around the notochord and is part of the vertebral column. we include a distinct subclass for bony vertebra In contrast to lampreys and jawed vertebrates, hagfishes were thought to lack vertebrae. Now, long overlooked vertebral rudiments have been analysed in hagfish, suggesting that vertebrae existed in the last common ancestor of all vertebrates.[well established][VHOG] @@ -407995,6 +404068,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010913 vertebral element + + + + @@ -408005,12 +404082,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -408074,12 +404146,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of either the head or the neck. NCIT:C32716 UMLS:C0448281 @@ -408089,15 +404156,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010959 craniocervical muscle + + + + - - - - - - + prolog @@ -408122,20 +404188,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -408154,6 +404212,10 @@ Classes for population already exist in IDO ('organism population', I pharyngeal arch cartilage + + + + @@ -408163,12 +404225,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -408212,12 +404269,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -408226,8 +404278,8 @@ Classes for population already exist in IDO ('organism population', I The dorsal portion of the first pharyngeal arch, comprising the upper jaw[ZFIN,VHOG]. Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG] - - + + EFO:0003659 TAO:0001272 VHOG:0000511 @@ -408245,6 +404297,10 @@ Classes for population already exist in IDO ('organism population', I palatoquadrate arch + + + + @@ -408254,12 +404310,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VHOG @@ -408813,14 +404864,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. - + axial skeletal system FMA:302077 post-cranial axial skeletal system @@ -408829,6 +404875,10 @@ Classes for population already exist in IDO ('organism population', I postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton + + + + @@ -408838,12 +404888,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -408883,12 +404928,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Gland of the lamina epithelialis mucosae which perforate the lamina muscularis, with their adenomeres located in the submucosal connective tissue. BTO:0003751 EMAPA:37970 @@ -408897,15 +404937,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011148 submucosal gland + + + + - - - - - - + perforates @@ -408929,12 +404968,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Subdivision of skull that consists of the facial bones. EHDAA2:0002206 EHDAA:8361 @@ -408953,6 +404987,10 @@ Classes for population already exist in IDO ('organism population', I facial skeleton http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg + + + + @@ -408962,12 +405000,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -409252,12 +405285,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a large intestine. FMA:15654 @@ -409271,15 +405299,14 @@ Classes for population already exist in IDO ('organism population', I lamina propria of large intestine + + + + - - - - - - + FMA @@ -409324,12 +405351,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle layer that is part of a large intestine. FMA:14971 NCIT:C32927 @@ -409342,15 +405364,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011198 muscle layer of large intestine + + + + - - - - - - + FMA @@ -409408,12 +405429,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle layer that is part of a small intestine. FMA:14932 NCIT:C33569 @@ -409429,15 +405445,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011201 muscle layer of small intestine + + + + - - - - - - + FMA @@ -409595,12 +405610,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Muscles within the eye (bulbus oculi).[AAO] AAO:0010038 EMAPA:18808 @@ -409611,15 +405621,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011222 intra-ocular muscle + + + + - - - - - - + EMAPA @@ -409809,12 +405818,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the trunk that is in the dorsum[cjm]. In humans, the subdivision of trunk which is demarcated from the trunk proper by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines, the external surface of the posterior abdominal wall; together with the trunk proper, it constitutes the trunk[FMA] EMAPA:35162 @@ -409829,6 +405833,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011270 dorsal trunk + + + + @@ -409838,12 +405846,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -409879,18 +405882,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + compare with 'stratum basale of epidermis'. This class is the source for many adult structures - see WP2062. See also: 'enveloping layer of ectoderm' EHDAA2:0001845 uberon @@ -409899,6 +405892,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011272 embryonic skin basal layer + + + + + + + + @@ -409908,23 +405909,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -410050,12 +406041,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -410079,15 +406065,14 @@ Classes for population already exist in IDO ('organism population', I lumen of esophagus + + + + - - - - - - + FMA @@ -410151,12 +406136,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -410174,15 +406154,14 @@ Classes for population already exist in IDO ('organism population', I paired limb/fin skeleton + + + + - - - - - - + ISBN:9780878932504 @@ -410245,24 +406224,22 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + EHDAA2:0002120 upper jaw future lip uberon UBERON:0011592 future upper lip + + + + + + + + @@ -410272,23 +406249,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + fusion - - - - - - + fusion @@ -410316,12 +406283,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -410342,15 +406304,14 @@ Classes for population already exist in IDO ('organism population', I jaw region http://eol.org/collections/11578 + + + + - - - - - - + EMAPA FMA-abduced ZFA-abduced @@ -410370,18 +406331,17 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0001020 lower jaw future lip uberon UBERON:0011596 future lower lip + + + + @@ -410391,12 +406351,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia:Mandibular_prominence @@ -410473,18 +406428,17 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that develops_from a ectoderm and is part of a oral epithelium. EHDAA2:0004137 uberon UBERON:0011642 oral epithelium from ectoderm + + + + @@ -410494,12 +406448,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -411493,12 +407442,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle layer that is part of a wall of esophagus. In the upper esophagus, part of the externa is skeletal muscle, rather than smooth muscle FMA:62998 @@ -411512,15 +407456,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011878 muscle layer of esophagus + + + + - - - - - - + upper part Wikipedia:Muscular_layer @@ -411583,12 +407526,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -411630,6 +407568,10 @@ Classes for population already exist in IDO ('organism population', I anterior uvea + + + + @@ -411639,20 +407581,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MP - - - - - lexical - @@ -411691,12 +407622,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -411721,6 +407647,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011899 epimysium + + + + @@ -411730,12 +407660,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -411788,12 +407713,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Masses of developing blood cells attached to endothelium in the yolk sac. EHDAA2:0000177 EMAPA:16115 @@ -411804,15 +407724,14 @@ Classes for population already exist in IDO ('organism population', I yolk sac blood island + + + + - - - - - - + EHDAA2 @@ -412291,8 +408210,8 @@ Classes for population already exist in IDO ('organism population', I Anatomical system that consists of the integumental system plus all mucosae and submucosae. - - + + uberon dermatological system UBERON:0012125 @@ -412673,12 +408592,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The deep cervical artery (Profunda cervicalis) is an artery of the neck. FMA:10659 @@ -412690,15 +408604,14 @@ Classes for population already exist in IDO ('organism population', I deep cervical artery + + + + - - - - - - + FMA @@ -412842,26 +408755,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004588 uberon UBERON:0012361 internal anal region + + + + - - - - - - + EHDAA2 @@ -412882,12 +408789,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle layer that is part of an intestine. FMA:15697 intestinal muscularis propria @@ -412897,15 +408799,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0012367 muscle layer of intestine + + + + - - - - - - + FMA @@ -413195,12 +409096,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -413222,6 +409118,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0012429 hematopoietic tissue + + + + @@ -413231,12 +409131,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + defitional @@ -413382,12 +409277,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -413404,15 +409294,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0012463 cloacal lumen + + + + - - - - - - + cjm @@ -413602,26 +409491,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004589 uberon UBERON:0012469 external anal region + + + + - - - - - - + EHDAA2 @@ -413648,12 +409531,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -413673,15 +409551,14 @@ Classes for population already exist in IDO ('organism population', I skeleton of pectoral complex + + + + - - - - - - + FMA @@ -413750,12 +409627,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -413775,15 +409647,14 @@ Classes for population already exist in IDO ('organism population', I skeleton of pelvic complex + + + + - - - - - - + FMA @@ -413835,18 +409706,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The posterior region of the neck, including the suboccipital region. nuchal nape @@ -413869,6 +409730,14 @@ Classes for population already exist in IDO ('organism population', I dorsal part of neck + + + + + + + + @@ -413878,23 +409747,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + FMA @@ -414723,12 +410582,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A vein that drains a lip. SCTID:367664002 labial vein of face @@ -414739,15 +410593,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0013136 vein of lip + + + + - - - - - - + FMA @@ -414926,12 +410779,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -414955,15 +410803,14 @@ Classes for population already exist in IDO ('organism population', I cranial cavity http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg + + + + - - - - - - + Wikipedia @@ -415456,12 +411303,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -415478,15 +411320,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0013525 stomach lumen + + + + - - - - - - + FMA @@ -415537,12 +411378,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of a intestinal villus. FMA:63587 intestinal villus epithelium @@ -415552,15 +411388,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0013636 epithelium of intestinal villus + + + + - - - - - - + FMA @@ -416674,9 +412509,9 @@ Classes for population already exist in IDO ('organism population', I Subcutaneous adipose tissue that is located in the peritoneal cavity. Adipose tissue located inside the peritoneal cavity, packed in between internal organs and torso. An excess of visceral fat is known as central obesity, or belly fat, the pot belly or beer belly effect, in which the abdomen protrudes excessively[BTO:0004041]. - - - + + + BTO:0004041 CALOHA:TS-2405 uberon @@ -416758,9 +412593,9 @@ Classes for population already exist in IDO ('organism population', I Subcutaneous adipose tissue that is located in the abdominal region. - - - + + + CALOHA:TS-2406 abdominal subcutaneous adipose tissue subcutaneous abdominal fat @@ -417102,12 +412937,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of a frontonasal prominence. EHDAA2:0004108 EMAPA:32918 @@ -417115,6 +412945,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0014702 frontonasal process epithelium + + + + @@ -417124,12 +412958,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -417199,12 +413028,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -417219,15 +413043,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0014704 pleuroperitoneal canal lumen + + + + - - - - - - + EHDAA2 @@ -417429,18 +413252,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -417469,26 +413282,24 @@ Classes for population already exist in IDO ('organism population', I Classification notes: May be considered an external sphincter[PMID:8224664] crus of diaphragm + + + + + + + + - - - - - - + PMID:23586979 - - - - - - + PMID:23586979 @@ -417977,26 +413788,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a pectoral appendage (forelimb or pectoral fin). uberon UBERON:0014794 pectoral appendage muscle + + + + - - - - - - + prolog @@ -418023,26 +413828,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a pelvic appendage (hindlimb or pelvic fin). uberon UBERON:0014795 pelvic appendage muscle + + + + - - - - - - + prolog @@ -418203,12 +414002,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + One of the primary blood vessel sprouts that originate from the dorsal aorta and posterior cardinal vein and align dorsoventrally at the myotomal boundaries between somites. Blood vessels that connect the dorsal aorta or the posterior cardinal vein and the dorsal longitudinal anastomotic vessel. They run along the vertical myotomal boundaries. At early stages these don't have venous or arterial markers[ZFA:0001285, ZFIN:ZDB-PUB-030908-4]. EFO:0003664 @@ -418226,6 +414020,10 @@ Classes for population already exist in IDO ('organism population', I intersomitic vessel + + + + @@ -418235,12 +414033,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -418467,12 +414260,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + consider merging into myocardial compact layer FMA:83105 perimysial connective tissue of subepicardium @@ -418481,15 +414269,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0015128 subepicardial layer of epicardium + + + + - - - - - - + FMA @@ -418589,31 +414376,25 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands. the only orbital gland found in anuran amphibians is either the Harderian or the lacrimal; if it is a lacrimal, then a progressive lateral migration of the lacrimal glands must occur through the amniotes[PMID:7559104] the only orbital gland found in anuran amphibians is the Harderian[PMID:8843648] - + ocular gland uberon orbital gland UBERON:0015152 gland of ocular region + + + + - - - - - - + inferred @@ -419070,18 +414851,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + A basement membrane of epithelium that is part of a respiratory system. EMAPA:37570 MA:0001815 @@ -419089,15 +414859,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0015329 respiratory system basement membrane + + + + - - - - - - + MA @@ -419159,12 +414928,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The hepatic artery proper (also proper hepatic artery), arises from the common hepatic artery and runs alongside the portal vein and the common bile duct to form the portal triad. The hepatic artery proper gives off a small supraduodenal artery to the duodenal bulb. Then the right gastric artery comes off and runs to the left along the lesser curvature of the stomach to meet the left gastric artery, which is a branch of the celiac trunk. It subsequently gives off the cystic artery, which feeds the gallbladder, before bifurcating into the right and left hepatic arteries. Of note, the right and left hepatic arteries may demonstrate variant anatomy. A replaced right hepatic artery may arise from the superior mesenteric artery (SMA) and a replaced left hepatic artery may arise from the left gastric artery. EMAPA:37217 @@ -419179,6 +414943,10 @@ Classes for population already exist in IDO ('organism population', I proper hepatic artery + + + + @@ -419188,12 +414956,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -419230,21 +414993,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -419264,15 +415019,14 @@ Classes for population already exist in IDO ('organism population', I left hepatic artery + + + + - - - - - - + FMA @@ -419317,21 +415071,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -419351,15 +415097,14 @@ Classes for population already exist in IDO ('organism population', I right hepatic artery + + + + - - - - - - + FMA @@ -419723,12 +415468,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a duodenum. EMAPA:27255 @@ -419742,15 +415482,14 @@ Classes for population already exist in IDO ('organism population', I duodenum lamina propria + + + + - - - - - - + FMA @@ -420729,12 +416468,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -420757,6 +416491,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0016887 entire extraembryonic component + + + + @@ -420766,12 +416504,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO @@ -421279,12 +417012,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -421302,15 +417030,14 @@ Classes for population already exist in IDO ('organism population', I skeletal musculature + + + + - - - - - - + MA @@ -422681,12 +418408,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -422700,15 +418422,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0034710 spinal cord ventricular layer + + + + - - - - - - + EHDAA2 @@ -423954,12 +419675,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any of several arteries that arise from the aorta and supply blood to the esophagus. FMA:4149 @@ -423973,6 +419689,10 @@ Classes for population already exist in IDO ('organism population', I esophageal artery + + + + @@ -423982,12 +419702,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -424465,12 +420180,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -424486,15 +420196,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0035763 cavity of cardiac chamber + + + + - - - - - - + FMA @@ -424865,18 +420574,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -424892,26 +420591,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0035831 costal diaphragm + + + + + + + + - - - - - - + PMID:23586979 - - - - - - + PMID:23586979 @@ -425019,26 +420716,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004070 uberon UBERON:0036072 respiratory primordium epithelium + + + + - - - - - - + EHDAA2 @@ -425066,27 +420757,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004071 respiratory primordium associated mesenchyme uberon UBERON:0036073 respiratory primordium mesenchyme + + + + - - - - - - + EHDAA2 @@ -425552,20 +421237,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Wall of ventricle which is continuous with the wall of aorta. FMA:9556 left ventricular wall @@ -425573,6 +421250,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0036285 wall of left ventricle + + + + @@ -425582,12 +421263,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -425612,20 +421288,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Wall of ventricle which is continuous with the wall of pulmonary trunk. FMA:9533 right ventricular wall @@ -425633,6 +421301,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0036286 wall of right ventricle + + + + @@ -425642,12 +421314,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -425680,12 +421347,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -425697,15 +421359,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0036288 anterior wall of left ventricle + + + + - - - - - - + FMA @@ -425940,36 +421601,27 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:14657 gallbladder wall uberon UBERON:0036343 wall of gallbladder + + + + - - - - - - + FMA @@ -425988,26 +421640,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:15089 brachiocephalic arterial wall uberon UBERON:0036351 wall of brachiocephalic artery + + + + @@ -426017,12 +421665,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426041,26 +421684,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:15090 subclavian arterial wall uberon UBERON:0036352 wall of subclavian artery + + + + @@ -426070,12 +421709,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426094,10 +421728,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -426107,27 +421738,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA:15704 anal canal wall uberon UBERON:0036362 wall of anal canal + + + + - - - - - - + FMA @@ -426146,26 +421771,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:18211 pulmonary arterial wall uberon UBERON:0036422 wall of pulmonary artery + + + + @@ -426175,12 +421796,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426199,26 +421815,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:231590 uberon UBERON:0036553 wall of synovial tendon sheath + + + + @@ -426228,12 +421840,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426246,27 +421853,23 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:58098 eyeball wall uberon UBERON:0036925 wall of eyeball + + + + @@ -426276,12 +421879,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426300,28 +421898,24 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:63144 orbit wall uberon UBERON:0037089 wall of orbit + + + + @@ -426331,12 +421925,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426355,26 +421944,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:66284 common carotid arterial wall uberon UBERON:0037094 wall of common carotid artery + + + + @@ -426384,12 +421969,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426408,33 +421988,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - - - - - - - + + + Wall of organ which has as its parts the endocardium, myocardium , epicardium, and the cardiac septum, surrounded by the pericardial sac proper and is continuous with the walls of the systemic and pulmonary arterial and venous trees. FMA:7274 cardiac wall @@ -426442,6 +422004,18 @@ Classes for population already exist in IDO ('organism population', I UBERON:0037144 wall of heart + + + + + + + + + + + + @@ -426451,34 +422025,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA @@ -426512,12 +422071,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -426533,15 +422087,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + FMA Wikipedia @@ -426582,26 +422135,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA:15395 uberon UBERON:0039228 sigmoid vein + + + + - - - - - - + FMA @@ -426663,18 +422210,17 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. FMA:14342 uberon UBERON:0039856 right ovarian vein + + + + @@ -426684,12 +422230,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426765,9 +422306,9 @@ Classes for population already exist in IDO ('organism population', I A zone of skin that is part of the face. - - - + + + 2012-02-05T05:23:01Z EMAPA:36657 FMA:24758 @@ -426871,7 +422412,7 @@ Classes for population already exist in IDO ('organism population', I An anatomical junction between two parts of the digestive tract. - + 2021-02-05T11:19:31Z uberon UBERON:1100000 @@ -427569,7 +423110,7 @@ Classes for population already exist in IDO ('organism population', I Left part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. - + uberon UBERON:8000006 left side of back @@ -427606,7 +423147,7 @@ Classes for population already exist in IDO ('organism population', I Right part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. - + uberon UBERON:8000007 right side of back @@ -427625,25 +423166,23 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A collection of Purkinje fibers that receives signals from the right and left bundle branches and innervates the ventricular cardiac muscle. The Purkinje fiber network creates synchronized contractions of the heart ventricles. - + Purkinje fibre network uberon UBERON:8000009 Purkinje fiber network + + + + + + + + @@ -427655,12 +423194,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -427668,12 +423202,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -427716,7 +423245,7 @@ Classes for population already exist in IDO ('organism population', I Hepatic serous coat; peritoneal covering of the liver, enclosing almost all except for a triangular area on its posterior surface (the 'bare area of the liver') and a smaller area where the liver and gallbladder are in direct contact. - + serosa of liver tunica serosa hepatis uberon @@ -427769,7 +423298,7 @@ Classes for population already exist in IDO ('organism population', I Subserosal tissue of liver. A zone of areolar connective tissue lying beneath the serous coat of the liver and distinguished with difficulty from the fibrous capsule of Glisson. - + hepatic subserosa subserosal tissue of liver subserous layer of liver @@ -427824,7 +423353,7 @@ Classes for population already exist in IDO ('organism population', I Venule of villus of small intestine. - + venule of small intestine uberon UBERON:8410001 @@ -427862,7 +423391,7 @@ Classes for population already exist in IDO ('organism population', I Arteriole of villus of small intestine. - + arteriole of small intestine arteriole of villus of small intestine small intestine villus arteriole @@ -427902,7 +423431,7 @@ Classes for population already exist in IDO ('organism population', I A venule that is located in the anorectum. - + anorectum venule uberon UBERON:8410008 @@ -427939,7 +423468,7 @@ Classes for population already exist in IDO ('organism population', I An arteriole that is located in the anorectum. - + anorectum arteriole uberon UBERON:8410009 @@ -427976,7 +423505,7 @@ Classes for population already exist in IDO ('organism population', I An arteriole located in the colon. - + uberon UBERON:8410015 arteriole of colon @@ -428017,7 +423546,7 @@ Classes for population already exist in IDO ('organism population', I An anatomical junction between two parts of the intestine. - + junction of intestine uberon UBERON:8410024 @@ -428054,7 +423583,7 @@ Classes for population already exist in IDO ('organism population', I A venule located in the colon. - + uberon UBERON:8410048 venule of colon @@ -428121,7 +423650,7 @@ Classes for population already exist in IDO ('organism population', I The anatomy, pathology and medical community considers the anus to be part of the large intestine, and supports the use of 'anorectum' to include rectum, anal canal and anus. Although a few resources seem to only include the distal part of the rectum in 'anorectum', this UBERON grouping term is meant to refer more broadly to the whole of rectum. anorectal - + anorectal canal uberon UBERON:8410050 @@ -428162,7 +423691,7 @@ Classes for population already exist in IDO ('organism population', I A capillary that is part of the anorectum. - + blood vessel capillary of anorectum uberon UBERON:8410056 @@ -428199,7 +423728,7 @@ Classes for population already exist in IDO ('organism population', I A capillary that is part of the colon. - + blood vessel capillary of colon uberon UBERON:8410057 @@ -428236,8 +423765,8 @@ Classes for population already exist in IDO ('organism population', I A capillary that is part of a small intestine. - - 2021-12-21T15:14:31Z + + 2021-12-21T15:14:31Z blood vessel capillary of small intestine small intestine capillary uberon @@ -428278,8 +423807,8 @@ Classes for population already exist in IDO ('organism population', I A submucosal gland found in a respiratory tract. - - 2022-03-24T14:21:59Z + + 2022-03-24T14:21:59Z EFO:0010666 respiratory tract submucosal gland submucosal gland of respiratory tract @@ -428411,8 +423940,8 @@ Classes for population already exist in IDO ('organism population', I A capillary that is part of the brain. - - 2022-06-24T09:28:31Z + + 2022-06-24T09:28:31Z uberon UBERON:8480001 capillary of brain @@ -428448,8 +423977,8 @@ Classes for population already exist in IDO ('organism population', I A portion of smooth muscle tissue that is part of the thoracic aorta. - - 2022-06-24T09:30:54Z + + 2022-06-24T09:30:54Z uberon UBERON:8480002 thoracic aorta smooth muscle tissue @@ -428485,8 +424014,8 @@ Classes for population already exist in IDO ('organism population', I A zone of skin that is above the clavicle zone in the pectoral girdle region. - - 2022-08-29T14:17:12Z + + 2022-08-29T14:17:12Z uberon UBERON:8480025 skin of clavicle region @@ -428523,8 +424052,8 @@ Classes for population already exist in IDO ('organism population', I A zone of skin that is above the iliac crest in the pelvic girdle bone/zone. - - 2022-08-29T14:19:16Z + + 2022-08-29T14:19:16Z skin of posterior iliac crest region uberon UBERON:8480026 @@ -428562,8 +424091,8 @@ Classes for population already exist in IDO ('organism population', I A zone of skin that is part of the external genitalia. - - 2022-08-30T06:55:06Z + + 2022-08-30T06:55:06Z uberon UBERON:8480029 skin of external genitalia @@ -428600,8 +424129,8 @@ Classes for population already exist in IDO ('organism population', I A zone of skin part of some gonad. - - 2023-08-29T10:24:24Z + + 2023-08-29T10:24:24Z uberon UBERON:8480074 skin of gonad @@ -428626,8 +424155,8 @@ Classes for population already exist in IDO ('organism population', I A muscle tissue that is associated with soft internal organs (viscera). - - 2023-02-16T10:17:46Z + + 2023-02-16T10:17:46Z visceral muscle uberon UBERON:8600004 @@ -428664,8 +424193,8 @@ Classes for population already exist in IDO ('organism population', I A striated muscle tissue that is associated with soft internal organs (viscera). - - 2023-02-16T10:34:43Z + + 2023-02-16T10:34:43Z striated visceral muscle tissue uberon UBERON:8600006 @@ -428704,8 +424233,8 @@ Classes for population already exist in IDO ('organism population', I A spherical or tubular structure in a submucosal gland that produces and secretes mucus and other substances into the ducts leading to the surface epithelium. - - 2023-05-02T08:57:27Z + + 2023-05-02T08:57:27Z uberon UBERON:8600012 @@ -428742,9 +424271,9 @@ Classes for population already exist in IDO ('organism population', I A discrete anatomical unit of the lung that is composed of a segmental bronchus and the lung tissue supplied by that bronchus. A bronchopulmonary segment exhibits a pyramidal shape, with its apex pointing towards the center of the lung and its base toward the pleural surface. - - - 2023-07-20T12:43:29Z + + + 2023-07-20T12:43:29Z lung segment uberon UBERON:8600017 @@ -428813,8 +424342,8 @@ Classes for population already exist in IDO ('organism population', I A venule that is part of a lung and drains oxygenated blood from pulmonary capillaries. A pulmonary venule merges into a pulmonary vein branch that runs in the pulmonary interlobular septa. - - 2023-10-24T11:26:27Z + + 2023-10-24T11:26:27Z uberon UBERON:8600024 pulmonary venule @@ -435993,7 +431522,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim A Mus musculus individual that is a substrain of C57BL/6J (mother) and CAST/EiJ (father). - paola + paola PMID:27668657 https://orcid.org/0000-0002-3163-0115 @@ -436007,8 +431536,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim Inbred Strain. - Zoe May Pendlington - 2023-11-02T09:06:58Z + Zoe May Pendlington + 2023-11-02T09:06:58Z MGI:2159849 TGEMO:00019 DBA @@ -436021,8 +431550,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim Strain family. - Zoe May Pendlington - 2023-11-02T09:09:47Z + Zoe May Pendlington + 2023-11-02T09:09:47Z MGI:2159850 TGEMO:00108 C @@ -436297,7 +431826,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:15:07Z Islands east of the Horn of Africa and south of Yemen Ecoregion WWF:AT1318 @@ -436312,7 +431841,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:18:55Z WWF:AT1317 https://www.worldwildlife.org/ecoregions/at1317 @@ -436326,7 +431855,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:20:56Z WWF:AT1316 https://www.worldwildlife.org/ecoregions/at1316 @@ -436340,7 +431869,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:24:28Z Africa: Namibia Ecoregion WWF:AT1315 @@ -436355,7 +431884,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:26:15Z WWF:AT1314 https://www.worldwildlife.org/ecoregions/at1314 @@ -436369,7 +431898,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:28:43Z WWF:AT1313 https://www.worldwildlife.org/ecoregions/at1313 @@ -436383,7 +431912,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:30:23Z WWF:AT1312 https://www.worldwildlife.org/ecoregions/at1312 @@ -436397,7 +431926,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:31:29Z WWF:AT1311 https://www.worldwildlife.org/ecoregions/at1311 @@ -436412,7 +431941,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:39:32Z WWF:AT1310 https://www.worldwildlife.org/ecoregions/at1310 @@ -436427,7 +431956,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:42:47Z WWF:AT1309 https://www.worldwildlife.org/ecoregions/at1309 @@ -436441,7 +431970,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:44:54Z WWF:AT1308 https://www.worldwildlife.org/ecoregions/at1308 @@ -436456,7 +431985,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:46:58Z Eastern Africa: Somalia WWF:AT1307 @@ -436471,7 +432000,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:54:57Z WWF:AT1306 https://www.worldwildlife.org/ecoregions/at1306 @@ -436486,7 +432015,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:08:06Z WWF:AT1305 https://www.worldwildlife.org/ecoregions/at1305 @@ -436500,7 +432029,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:11:29Z WWF:AT1304 https://www.worldwildlife.org/ecoregions/at1304 @@ -436514,7 +432043,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:13:33Z WWF:AT1303 https://www.worldwildlife.org/ecoregions/at1303 @@ -436529,7 +432058,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:16:12Z WWF:AT1302 https://www.worldwildlife.org/ecoregions/at1302 @@ -436544,7 +432073,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:18:09Z WWF:AT1301 https://www.worldwildlife.org/ecoregions/at1301 @@ -436557,7 +432086,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-04-26T23:38:50Z Indo-Malay Ecoregion @@ -436571,7 +432100,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-04-26T23:40:13Z WWF:IM1304 @@ -436586,7 +432115,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-04-27T00:12:51Z WWF:IM1303 @@ -436601,8 +432130,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim A polar front between the deep, cold Arctic air and the shallower, warmer polar air of northern latitudes on Earth. - - 2019-08-20T13:47:18Z + + 2019-08-20T13:47:18Z envoAtmo envoPolar Arctic front @@ -436621,8 +432150,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim A polar front between the deep, cold Antarctic air and the shallower, warmer polar air of southern latitudes on Earth. - - 2019-08-20T13:48:44Z + + 2019-08-20T13:48:44Z envoAtmo envoPolar Antarctic front @@ -436642,8 +432171,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim Stellar radiation emitted from Sol. - - 2020-05-19T22:27:44Z + + 2020-05-19T22:27:44Z Solar radiation @@ -440805,490 +436334,490 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim meter - - metre + A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second. m + m - A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second. - meter + metre "A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second." [BIPM:BIPM, NIST:NIST] + meter - kilogram - kg + A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France. kg - kilogram + + kg "A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France." [BIPM:BIPM, NIST:NIST] - A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France. + kilogram + second + A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom. s + sec s - second - sec - A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom. "A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom." [BIPM:BIPM, NIST:NIST] - second + second - cm - centimeter - cm - centimetre centimeter + A length unit which is equal to one hundredth of a meter or 10^[-2] m. + cm + centimetre + cm "A length unit which is equal to one hundredth of a meter or 10^[-2] m." [NIST:NIST] - A length unit which is equal to one hundredth of a meter or 10^[-2] m. + centimeter + millimeter A length unit which is equal to one thousandth of a meter or 10^[-3] m. mm - mm - millimetre - millimeter - millimeter + millimetre + mm "A length unit which is equal to one thousandth of a meter or 10^[-3] m." [NIST:NIST] + millimeter micrometer + A length unit which is equal to one millionth of a meter or 10^[-6] m. + um + + micrometre micron + um "A length unit which is equal to one millionth of a meter or 10^[-6] m." [NIST:NIST] - micrometre micrometer - A length unit which is equal to one millionth of a meter or 10^[-6] m. - um - - um - nm - nm nanometer A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m. - nanometre - nanometer + nm + nanometre + nm "A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m." [NIST:NIST] + nanometer - angstrom angstrom - "A length unit which is equal to 10 [-10] m." [NIST:NIST] A length unit which is equal to 10 [-10] m. - Å + Å + "A length unit which is equal to 10 [-10] m." [NIST:NIST] + angstrom - gram A mass unit which is equal to one thousandth of a kilogram or 10^[-3] kg. - gram - g g + + g "A mass unit which is equal to one thousandth of a kilogram or 10^[-3] kg." [NIST:NIST] + gram - - milligram + milligram A mass unit which is equal to one thousandth of a gram or 10^[-3] g. mg - "A mass unit which is equal to one thousandth of a gram or 10^[-3] g." [UOC:GVG] + mg - milligram + "A mass unit which is equal to one thousandth of a gram or 10^[-3] g." [UOC:GVG] + milligram microgram - A mass unit which is equal to one millionth of a gram or 10^[-6] g. - ug ug + + ug "A mass unit which is equal to one millionth of a gram or 10^[-6] g." [UOC:GVG] microgram - A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g. - ng nanogram + A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g. + ng - nanogram + ng "A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g." [UOC:GVG] - ng + nanogram picogram - A mass unit which is equal to 10^[-12] g. + pg + + pg "A mass unit which is equal to 10^[-12] g." [UOC:GVG] picogram - pg - pg - degree Celsius - "A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K." [NIST:NIST] - degree C + degree Celsius A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K. + C + degree C C - C - degree Celsius + "A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K." [NIST:NIST] + degree Celsius - min minute - - min - minute A time unit which is equal to 60 seconds. + min + + min "A time unit which is equal to 60 seconds." [Wikipedia:Wikipedia] + minute - hour - hour + A time unit which is equal to 3600 seconds or 60 minutes. h - h hr - A time unit which is equal to 3600 seconds or 60 minutes. + + h "A time unit which is equal to 3600 seconds or 60 minutes." [Wikipedia:Wikipedia] + hour day + A time unit which is equal to 24 hours. "A time unit which is equal to 24 hours." [Wikipedia:Wikipedia] - A time unit which is equal to 24 hours. day - - week - "A time unit which is equal to 7 days." [Wikipedia:Wikipedia] week A time unit which is equal to 7 days. + + "A time unit which is equal to 7 days." [Wikipedia:Wikipedia] + week - - month - "A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which in science is taken to be equal to 30 days." [Wikipedia:Wikipedia] month A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which in science is taken to be equal to 30 days. + + "A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which in science is taken to be equal to 30 days." [Wikipedia:Wikipedia] + month year - "A time unit which is equal to 12 months which in science is taken to be equal to 365.25 days." [Wikipedia:Wikipedia] A time unit which is equal to 12 months which is science is taken to be equal to 365.25 days. - year + "A time unit which is equal to 12 months which in science is taken to be equal to 365.25 days." [Wikipedia:Wikipedia] + year - "A substance unit equal to a millionth of a mol or 10^[-6] mol." [NIST:NIST] micromole - A substance unit equal to a millionth of a mol or 10^[-6] mol. - micromole - umol umol + + umol + "A substance unit equal to a millionth of a mol or 10^[-6] mol." [NIST:NIST] + micromole + nanomole + A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol. nmol + nmol "A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol." [NIST:NIST] - - nanomole nanomole - A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol. - pmol - "A substance unit equal to 10^[-12] mol." [NIST:NIST] - pmol + picomole A substance unit equal to 10^[-12] mol. + pmol - picomole + pmol + "A substance unit equal to 10^[-12] mol." [NIST:NIST] picomole - M - M - "A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L)." [UOC:GVG] + molar A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L). + M - molar + M + "A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L)." [UOC:GVG] molar + millimolar A unit of molarity which is equal to one thousandth of a molar or 10^[-3] M. - mM mM - millimolar - millimolar + mM "A unit of molarity which is equal to one thousandth of a molar or 10^[-3] M." [UOC:GVG] + millimolar - uM - micromolar - uM + micromolar A unit of molarity which is equal to one millionth of a molar or 10^[-6] M. + uM - micromolar + uM "A unit of molarity which is equal to one millionth of a molar or 10^[-6] M." [UOC:GVG] + micromolar - nM - nM nanomolar - "A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M." [UOC:GVG] A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M. - nanomolar + nM + nM + "A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M." [UOC:GVG] + nanomolar - pM picomolar + A unit of molarity which is equal to 10^[-12] M. + pM + pM "A unit of molarity which is equal to 10^[-12] M." [UOC:GVG] picomolar - - A unit of molarity which is equal to 10^[-12] M. cubic centimeter A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml. + cc - cubic centimetre - cubic centimeter - cm^3 cc + cm^3 + cubic centimetre "A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml." [NIST:NIST] - cc + cubic centimeter - milliliter - "A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter." [NIST:NIST] + milliliter A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter. + ml millilitre ml - milliliter - ml + "A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter." [NIST:NIST] + milliliter - litre - A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter. - liter - "A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter." [NIST:NIST] + A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter. L - l + L + l + litre + "A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter." [NIST:NIST] liter - "A volume unit which is equal to one thousand of a cubic meter or 10^[-3] m^[3], or to 1 L." [NIST:NIST] - cubic decimeter + cubic decimeter A volume unit which is equal to one thousand of a cubic meter or 10^[-3] m^[3], or to 1 L. cubic decimetre - cubic decimeter dm^[3] + "A volume unit which is equal to one thousand of a cubic meter or 10^[-3] m^[3], or to 1 L." [NIST:NIST] + cubic decimeter - microliter microliter + A volume unit which is equal to one millionth of a liter or 10^[-6] L. ul + microlitre - A volume unit which is equal to one millionth of a liter or 10^[-6] L. ul - "A volume unit which is equal to one millionth of a liter or 10^[-6] L." [NIST:NIST] + microliter + nanoliter A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L. - nanoliter - "A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L." [NIST:NIST] + nl - nanoliter nanolitre nl - nl + "A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L." [NIST:NIST] + nanoliter - picoliter - picolitre - picoliter A volume unit which is equal to 10^[-12] L. pl - "A volume unit which is equal to 10^[-12] L." [NIST:NIST] + + picolitre pl + "A volume unit which is equal to 10^[-12] L." [NIST:NIST] + picoliter - s^1 hertz - Hz + A frequency unit which is equal to 1 complete cycle of a recurring phenomenon in 1 second. + Hz + s^1 "A frequency unit which is equal to 1 complete cycle of a recurring phenomenon in 1 second." [NIST:NIST] - A frequency unit which is equal to 1 complete cycle of a recurring phenomenon in 1 second. hertz mass percentage + A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture. + % w/w + percent weight pr weight - weight-weight percentage w/w - mass percentage - % w/w + weight-weight percentage "A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture." [Wikipedia:Wikipedia] - percent weight pr weight - A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture. + mass percentage - (w/v) mass volume percentage - % w/v - A dimensionless concentration unit which denotes the mass of the substance in a mixture as a percentage of the volume of the entire mixture. - mass volume percentage + % w/v percent vol per vol + + (w/v) weight-volume percentage "A dimensionless concentration unit which denotes the mass of the substance in a mixture as a percentage of the volume of the entire mixture." [UOC:GVG] + mass volume percentage + volume percentage + A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution. % v/v - volume percentage + percent vol per vol - "A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution." [UOC:GVG] - A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution. % (v/v) - percent vol per vol - volume percentage + "A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution." [UOC:GVG] + volume percentage - g per L + gram per liter A mass unit density which is equal to mass of an object in grams divided by the volume in liters. + g per L + g/L + + g/L gram per litre - gram per liter "A mass unit density which is equal to mass of an object in grams divided by the volume in liters." [UOC:GVG] gram per liter - g/L - - g/L - "A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters." [UOC:GVG] - milligram per millilitre milligram per milliliter - mg per ml A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters. - milligram per milliliter + mg per ml mg/ml mg/ml + milligram per millilitre + "A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters." [UOC:GVG] + milligram per milliliter - A temperature unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius. degree Fahrenheit + A temperature unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius. + F "A temperature unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius." [Wikipedia:Wikipedia] - degree Fahrenheit - pH - + pH A dimensionless concentration notation which denotes the acidity of a solution in terms of activity of hydrogen ions (H+). + "A dimensionless concentration notation which denotes the acidity of a solution in terms of activity of hydrogen ions (H+)." [Wikipedia:Wikipedia] - pH + pH - ml/l - ml/l - milliliter per liter + milliliter per liter A volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution. ml per L + ml/l + millilitre per litre + ml/l "A volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution." [NIST:NIST] - - milliliter per liter + milliliter per liter - g/dl - "A mass density unit which is equal to mass of an object in grams divided by the volume in deciliters." [UOC:GVG] gram per deciliter - gram per decilitre A mass density unit which is equal to mass of an object in grams divided by the volume in deciliters. + g/dl + g/dl + gram per decilitre + "A mass density unit which is equal to mass of an object in grams divided by the volume in deciliters." [UOC:GVG] gram per deciliter - g/dl - colony forming unit per volume - colony forming unit per volume A concentration unit which a measure of viable bacterial numbers in a given volume. + "A concentration unit which a measure of viable bacterial numbers in a given volume." [Wikipedia:Wikipedia] + colony forming unit per volume - + microliters per minute A volumetric flow rate unit which is equal to one microliter volume through a given surface in one minute. - microliters per minute - "A volumetric flow rate unit which is equal to one microliter volume through a given surface in one minute." [UOC:GVG] + microlitres per minute - microliters per minute uL/min + "A volumetric flow rate unit which is equal to one microliter volume through a given surface in one minute." [UOC:GVG] + microliters per minute - nM^-1 s^-1 count per nanomolar second - "A rate unit which is equal to one over one nanomolar second." [UOC:GVG] - A rate unit which is equal to one over one nanomolar second. + + nM^-1 s^-1 + "A rate unit which is equal to one over one nanomolar second." [UOC:GVG] count per nanomolar second - "A rate unit which is equal to one over one molar second." [UOC:GVG] - count per molar second - count per molar second A rate unit which is equal to one over one molar second. + M^-1 s^-1 + "A rate unit which is equal to one over one molar second." [UOC:GVG] + count per molar second - nM^-1 + count per nanomolar A rate unit which is equal to one over one nanomolar. + 1/nM + nM^-1 "A rate unit which is equal to one over one nanomolar." [UO:GVG] - count per nanomolar - count per nanomolar - count per molar - M^-1 - 1/M - count per molar A rate unit which is equal to one over one molar. + + 1/M + M^-1 "A rate unit which is equal to one over one molar." [UO:GVG] + count per molar + microgram per liter A mass unit density which is equal to mass of an object in micrograms divided by the volume in liters. - "A mass unit density which is equal to mass of an object in micrograms divided by the volume in liters." [UOC:GVG] - ug/L + ng/ml ug/L - microgram per litre - ng/ml - microgram per liter + microgram per litre + ug/L + "A mass unit density which is equal to mass of an object in micrograms divided by the volume in liters." [UOC:GVG] microgram per liter - milligram per kilogram per day "A dosage unit which is equal to 1 milligram per day of a toxic or pharmaceutical substance per kilogram body weight of the recipient subject." [UO:PC] + milligram per kilogram per day @@ -441763,23 +437292,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + + + + + @@ -441790,23 +437313,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + PMID:16417468 + + + + @@ -441922,23 +437439,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -441949,23 +437460,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442156,23 +437661,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA-abduced-lr + + + + @@ -442183,23 +437682,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + definitional + + + + @@ -442210,23 +437703,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + https://github.com/obophenotype/uberon/wiki/The-neural-crest + + + + @@ -442282,23 +437769,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + only in species that have a stomach + + + + @@ -442339,23 +437820,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Wikipedia:Vitelline_vein + + + + @@ -442396,23 +437871,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442438,23 +437907,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Wikipedia:Vitelline_vein + + + + @@ -442465,24 +437928,18 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + may be present in other parts in other species FMA + + + + @@ -442553,24 +438010,18 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + right arch 4 in human embryology.ch + + + + @@ -442581,23 +438032,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442608,23 +438053,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Wikipedia:Vitelline_vein + + + + @@ -442635,23 +438074,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Wikipedia + + + + @@ -442662,23 +438095,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + PMID:22179203 + + + + @@ -442689,23 +438116,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442716,23 +438137,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442743,23 +438158,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442770,23 +438179,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442797,23 +438200,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442824,23 +438221,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442851,23 +438242,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442878,23 +438263,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442905,23 +438284,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442959,23 +438332,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -443046,23 +438413,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + https://github.com/obophenotype/uberon/wiki/The-neural-crest + + + + @@ -443073,23 +438434,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -443100,23 +438455,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -443127,23 +438476,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -443171,23 +438514,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + cjm + + + + @@ -443230,23 +438567,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + PMID:16417468 + + + + @@ -443257,23 +438588,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + PMID:16417468 + + + + @@ -443284,24 +438609,18 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + AAO https://github.com/geneontology/go-ontology/issues/16143 + + + + @@ -443327,23 +438646,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + teleosts + + + + @@ -443354,23 +438667,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Mammals + + + + @@ -443381,23 +438688,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + conservatively place at deuterostome, excluding acoelomates + + + + @@ -443483,23 +438784,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -449033,5 +444328,5 @@ e.g. if GP X enables ATPase coupled transporter activity' and 'ATPase - + diff --git a/rbo.owl b/rbo.owl index 0fe7a46..3168d24 100644 --- a/rbo.owl +++ b/rbo.owl @@ -2,9 +2,9 @@ - - RBO is an ontology for the effects of radiation on biota in terrestrial and space environments. - Radiation Biology Ontology - - 2024-02-29 + + RBO is an ontology for the effects of radiation on biota in terrestrial and space environments. + Radiation Biology Ontology + + 2024-04-26 @@ -1219,9 +1220,9 @@ We also have the outstanding issue of how to aim different definitions to differ - Examples of a Creator include a person, an organisation, + Examples of a Creator include a person, an organisation, or a service. Typically, the name of a Creator should - be used to indicate the entity. + be used to indicate the entity. http://purl.org/dc/elements/1.1/creator uberon dc-creator @@ -1240,10 +1241,10 @@ We also have the outstanding issue of how to aim different definitions to differ - Typically, Date will be associated with the creation or + Typically, Date will be associated with the creation or availability of the resource. Recommended best practice for encoding the date value is defined in a profile of - ISO 8601 [W3CDTF] and follows the YYYY-MM-DD format. + ISO 8601 [W3CDTF] and follows the YYYY-MM-DD format. A date associated with an event in the life cycle of the resource. @@ -1256,9 +1257,9 @@ We also have the outstanding issue of how to aim different definitions to differ - Description may include but is not limited to: an abstract, + Description may include but is not limited to: an abstract, table of contents, reference to a graphical representation - of content or a free-text account of the content. + of content or a free-text account of the content. http://purl.org/dc/elements/1.1/description uberon dc-description @@ -1294,10 +1295,10 @@ We also have the outstanding issue of how to aim different definitions to differ - + Typically, a Title will be a name by which the resource is formally known. - + http://purl.org/dc/elements/1.1/title uberon dc-title @@ -1346,7 +1347,7 @@ We also have the outstanding issue of how to aim different definitions to differ Mark Miller - 2018-05-11T13:47:29Z + 2018-05-11T13:47:29Z http://purl.org/dc/terms/license uberon dcterms-license @@ -1539,7 +1540,7 @@ We also have the outstanding issue of how to aim different definitions to differ - has_alternative_id + has_alternative_id @@ -1596,7 +1597,7 @@ We also have the outstanding issue of how to aim different definitions to differ - has_obo_namespace + has_obo_namespace @@ -1604,7 +1605,7 @@ We also have the outstanding issue of how to aim different definitions to differ - has_related_synonym + has_related_synonym @@ -1630,7 +1631,7 @@ We also have the outstanding issue of how to aim different definitions to differ - in_subset + in_subset @@ -1908,14 +1909,6 @@ We also have the outstanding issue of how to aim different definitions to differ - - - - - - - - - - - - - - + @@ -101099,16 +101111,15 @@ consider revising 'pond' semantics GO:0005326 neurotransmitter transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -101354,44 +101365,32 @@ consider revising 'pond' semantics - - - - - - - - - - - - + + A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer + + + + + + + + - - - - - - + PMID:12382326 - - - - - - + PMID:12382326 @@ -109827,6 +109826,26 @@ consider revising 'pond' semantics + + + + + + + + + + + + + + + + + + + + @@ -109876,6 +109895,26 @@ consider revising 'pond' semantics + + + + + + + + + + + + + + + + + + + + @@ -110008,12 +110047,7 @@ consider revising 'pond' semantics - - - - - - + Enables the transfer of a protein from one side of a membrane to the other. GO:0015266 GO:0015463 @@ -110042,16 +110076,15 @@ consider revising 'pond' semantics GO:0008320 protein transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -120390,12 +120423,7 @@ consider revising 'pond' semantics - - - - - - + @@ -120410,16 +120438,15 @@ consider revising 'pond' semantics GO:0015075 monoatomic ion transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -120709,12 +120736,7 @@ consider revising 'pond' semantics - - - - - - + @@ -120737,16 +120759,15 @@ consider revising 'pond' semantics GO:0015114 phosphate ion transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -120779,12 +120800,7 @@ consider revising 'pond' semantics - - - - - - + @@ -120808,16 +120824,15 @@ consider revising 'pond' semantics GO:0015116 sulfate transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -120861,12 +120876,7 @@ consider revising 'pond' semantics - - - - - - + @@ -120878,16 +120888,15 @@ consider revising 'pond' semantics GO:0015123 acetate transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -121061,12 +121070,7 @@ consider revising 'pond' semantics - - - - - - + @@ -121081,16 +121085,15 @@ consider revising 'pond' semantics GO:0015144 carbohydrate transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -121161,12 +121164,7 @@ consider revising 'pond' semantics - - - - - - + @@ -121180,16 +121178,15 @@ consider revising 'pond' semantics GO:0015149 hexose transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -121273,12 +121270,7 @@ consider revising 'pond' semantics - - - - - - + @@ -121342,16 +121334,15 @@ consider revising 'pond' semantics GO:0015171 amino acid transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -207022,12 +207013,7 @@ consider revising 'pond' semantics - - - - - - + @@ -207042,16 +207028,15 @@ consider revising 'pond' semantics GO:1901505 carbohydrate derivative transmembrane transporter activity + + + + - - - - - - - GO_REF:0000090 + + GO_REF:0000090 @@ -257562,7 +257547,7 @@ clustering algorithm. A change of place or position of part of an organism that does not involve the entire organism [NBO:SMAC] - 2011-04-14T01:03:39Z + 2011-04-14T01:03:39Z George Gkoutos stationary movement behavior_ontology @@ -257576,7 +257561,7 @@ clustering algorithm. The act of moving any of the tissues and hard structures surrounding the mouth other than teeth, jaws or filter structures [NBO:AC] - 2011-04-14T01:03:39Z + 2011-04-14T01:03:39Z George Gkoutos mouth part movement other moved mouth parts @@ -257591,7 +257576,7 @@ clustering algorithm. The act of repeated grinding, tearing, and or crushing with teeth or jaws [NBO:SMAC] - 2011-04-14T01:20:02Z + 2011-04-14T01:20:02Z George Gkoutos chew gnaw @@ -257607,7 +257592,7 @@ clustering algorithm. "The action, reaction, or performance of an organism in response to external or internal stimuli." [GO:GO\:0007610] - 2011-04-05T09:53:10Z + 2011-04-05T09:53:10Z George Gkoutos NBO:0000000 behavior @@ -257624,7 +257609,7 @@ clustering algorithm. "Movement behavior of the body or its parts." - 2011-04-05T02:08:47Z + 2011-04-05T02:08:47Z George Gkoutos behavior_ontology kinesthetic behavior @@ -257636,7 +257621,7 @@ clustering algorithm. - 2012-03-17T09:51:17Z + 2012-03-17T09:51:17Z gkoutos behavior_ontology jaw movement @@ -267027,7 +267012,7 @@ The following are NOT conclusions based on data: data themselves; results from p Details see tracker: https://sourceforge.net/p/obi/obi-terms/778/ Person: Chris Stoeckert, Jie Zheng OBIB, OBI - Biobank + Biobank collection of specimens @@ -270185,7 +270170,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure. - + 2009-02-15T08:11:41Z dendriform dendroid @@ -270208,7 +270193,7 @@ class labels for these objects. The resulting predictor can be used to attach cl - + george 2009-06-05T09:16:46Z quality @@ -270225,7 +270210,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality inhering in a bearer by virtue of the bearer's having an empty space or cavity within. - + 2009-09-18T02:19:20Z quality PATO:0002078 @@ -270246,7 +270231,7 @@ class labels for these objects. The resulting predictor can be used to attach cl An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for basic dyes under specific pH conditions. - + 2009-10-05T12:05:23Z quality PATO:0002094 @@ -270269,7 +270254,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality inhering in a bearer by virtue of the bearer's processing the form of a thin plate sheet or layer. - + 2009-10-06T04:37:14Z quality PATO:0002124 @@ -270321,7 +270306,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality inhering in a bearer by virtue of its constitution. - + 2010-03-15T04:35:27Z quality PATO:0002198 @@ -270342,7 +270327,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical. - + 2010-07-13T04:22:30Z quality PATO:0002226 @@ -270374,7 +270359,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality inhering in a bearer by virtue of the bearer's surface becoming more extended in a plane. - + 2010-08-16T03:59:34Z quality compressed @@ -270397,7 +270382,7 @@ class labels for these objects. The resulting predictor can be used to attach cl Texture quality inhering in a bearer by virtue of the bearer's being marked with one or more channels. - + 2010-09-01T10:27:48Z quality channeled @@ -270420,7 +270405,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A shape that inheres in a 3 dimensional entity. - + 2010-10-05T12:31:16Z quality PATO:0002266 @@ -270453,7 +270438,7 @@ class labels for these objects. The resulting predictor can be used to attach cl An elasticity which is relatively high. - + 2011-03-30T11:50:21Z quality PATO:0002287 @@ -270475,7 +270460,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A cylindrical shape that is hollow. - + 2011-06-08T06:33:50Z tube like tube-shaped @@ -270516,7 +270501,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality that has a value that is increased compared to normal or average. - + 2011-06-16T06:39:43Z quality PATO:0002300 @@ -270570,7 +270555,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality of a process that has a value that is increased compared to normal or average. - + 2011-06-16T06:53:08Z quality PATO:0002304 @@ -270603,7 +270588,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A quality of an object that has a value that is increased compared to normal or average. - + 2011-06-16T06:54:01Z quality PATO:0002305 @@ -270623,7 +270608,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a by virtue of the bearer's exhibiting a consistently sized and approximately round cross-section along its length, which is many times larger than its diameter. - + 2011-09-09T04:50:10Z quality PATO:0002309 @@ -270645,7 +270630,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt - + 2011-10-12T12:45:16Z Lamé curve quality @@ -270676,7 +270661,7 @@ class labels for these objects. The resulting predictor can be used to attach cl An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for acidic dyes under specific pH conditions. - + 2012-12-17T03:01:19Z eosinophilic quality @@ -270700,7 +270685,7 @@ class labels for these objects. The resulting predictor can be used to attach cl Pertaining to the individual parts making up an aggregate fruit like a many-lobed "berry," such as a raspberry. - + 2012-12-17T03:11:10Z quality PATO:0002422 @@ -270723,7 +270708,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen. - + 2013-09-15T11:34:15Z quality PATO:0002462 @@ -270744,7 +270729,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching. - + 2013-09-15T11:48:26Z quality PATO:0002468 @@ -270765,7 +270750,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented transversely relative to the long axis of the bearer. - + 2013-09-15T12:29:15Z quality PATO:0002478 @@ -270788,7 +270773,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A nucleate quality inhering in a bearer by virtue of the bearer's having one or more nucleus. - + 2013-10-21T05:44:34Z quality PATO:0002505 @@ -270810,7 +270795,7 @@ class labels for these objects. The resulting predictor can be used to attach cl A structural quality inhering in the bearer by virtue of the bearer consisting of multiple structures lacking any physical connection to each other. - + 2014-12-12T08:43:17Z quality PATO:0010001 @@ -272392,12 +272377,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An anatomical entity that is or was part of a plant. rwalls 2010-11-15T11:41:38Z @@ -272409,15 +272389,14 @@ Classes for population already exist in IDO ('organism population', I Includes both material entities such as plant structures and immaterial entities such as plant anatomical spaces. CARO:0000000 'anatomical entity' is defined as: A part of a cellular organism that is either an immaterial entity or a material entity with granularity aboove the level of a protein complex. Or, a substance produced by a cellular organism with granularity above the level of a protein complex. Refers to BFO:0000004 'independent continuant'. plant anatomical entity + + + + - - - - - - + cjm @@ -278331,7 +278310,7 @@ Classes for population already exist in IDO ('organism population', I - + Planned exposure to radiation generated through a device or exposure to a source emitting ionising radiation 0000-0002-5111-7263 @@ -281114,24 +281093,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -281175,37 +281139,34 @@ Classes for population already exist in IDO ('organism population', I islet of Langerhans http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png + + + + + + + + + + + + - - - - - - + PMID:16417468 - - - - - - + PMID:16417468 - - - - - - + PMID:16417468 @@ -281513,12 +281474,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -281564,6 +281520,10 @@ Classes for population already exist in IDO ('organism population', I sympathetic nervous system http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png + + + + @@ -281573,12 +281533,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA MA ZFA-modified-from-isa @@ -281778,12 +281733,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -281796,24 +281746,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -281861,6 +281796,22 @@ Classes for population already exist in IDO ('organism population', I endocrine pancreas + + + + + + + + + + + + + + + + @@ -281870,12 +281821,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AAO FMA XAO @@ -281883,34 +281829,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + GO - - - - - - + GO - - - - - - + GO @@ -282121,12 +282052,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -282154,15 +282080,14 @@ Classes for population already exist in IDO ('organism population', I compound eye https://github.com/obophenotype/uberon/issues/457 + + + + - - - - - - + PMID:21062451 @@ -282244,12 +282169,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -282290,15 +282210,14 @@ Classes for population already exist in IDO ('organism population', I camera-type eye + + + + - - - - - - + definitional @@ -282410,7 +282329,7 @@ Classes for population already exist in IDO ('organism population', I An organ that is capable of transducing sensory stimulus to the nervous system. - + AEO:0000094 BSA:0000121 BTO:0000202 @@ -282736,12 +282655,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a respiratory airway. EMAPA:35877 FMA:265157 @@ -282764,15 +282678,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0000031 lamina propria of trachea + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -282996,7 +282909,7 @@ Classes for population already exist in IDO ('organism population', I A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer.[TAO] a smooth membrane consisting of a thin layer of cells which excrete serous fluid. Serous membranes line and enclose several body cavities, known as serous cavities, where they secrete a lubricating fluid which reduces friction from muscle movement. Serosa is not to be confused with adventitia, a connective tissue layer which binds together structures rather than reducing friction between them. Each serous membrane is composed of a secretory epithelial layer and a connective tissue layer underneath. The epithelial layer, known as mesothelium, consists of a single layer of avascular flat nucleated cells (cuboidal epithelium) which produce the lubricating serous fluid. This fluid has a consistency similar to thin mucus. These cells are bound tightly to the underlying connective tissue. The connective tissue layer provides the blood vessels and nerves for the overlying secretory cells, and also serves as the binding layer which allows the whole serous membrane to adhere to organs and other structures.[WP] in FMA, SM = mesothelium + connective tissue. It excludes the cavity. Serous sac = SM + cavity. Note that the SM is a subtype of wall in FMA. - + FMA:9581 GAID:19 MESH:D012704 @@ -283077,18 +282990,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -283139,6 +283042,14 @@ Classes for population already exist in IDO ('organism population', I tendon http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg + + + + + + + + @@ -283148,23 +283059,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + OG - - - - - - + AEO @@ -283234,18 +283135,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A biological tissue mass, most commonly a mass of nerve cell bodies. TODO - check vert vs invert. Other species: Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia). // Subdivision of neural tree (organ) which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord); together with a nucleus and its associated nerve, it constitutes a neural tree (organ). Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion. // a cluster of nerve cells and associated glial cells (nuclear location) // Portion of tissue that contains cell bodies of neurons and is located outside the central nervous system. @@ -283255,7 +283146,7 @@ Classes for population already exist in IDO ('organism population', I Subdivision of nervous system which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord. Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion (adapted from Foundational Model of Anatomy)[NLXANAT:100302]. Cranial sensory placodes are focused areas of the head ectoderm of vertebrates that contribute to the development of the cranial sense organs and their associated ganglia. Placodes have long been considered a key character of vertebrates, and their evolution is proposed to have been essential for the evolution of an active predatory lifestyle by early vertebrates.[well established][VHOG] ganglionic - + AAO:0010426 AEO:0000135 BAMS:G @@ -283297,6 +283188,14 @@ Classes for population already exist in IDO ('organism population', I ganglion + + + + + + + + @@ -283306,23 +283205,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + Bgee:AN @@ -283961,12 +283850,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -283987,15 +283871,14 @@ Classes for population already exist in IDO ('organism population', I respiratory tract + + + + - - - - - - + NCBIBook:NBK10107 @@ -284549,7 +284432,7 @@ Classes for population already exist in IDO ('organism population', I Any part or collection of parts of the central or peripheral nervous system. Parts may span both CNS and PNS. - + 2009-06-18T09:00:04Z BIRNLEX:1157 NCIT:C13040 @@ -284652,12 +284535,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm. merge with non-neural. In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube) @@ -284683,6 +284561,10 @@ Classes for population already exist in IDO ('organism population', I external ectoderm http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png + + + + @@ -284692,12 +284574,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -284810,12 +284687,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -284858,15 +284730,14 @@ Classes for population already exist in IDO ('organism population', I morula http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png + + + + - - - - - - + EHDAA2 @@ -285019,18 +284890,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A mass of cells that develop into the body of the embryo and some extraembryonic tissues. A group of cells found in the mammalian blastocyst that give rise to the embryo. [Biology_Online][VHOG] A small sphere of cells known as the inner cell mass lies within the trophoblast (of all eutherian mammals).[well established][VHOG] @@ -285058,26 +284919,24 @@ Classes for population already exist in IDO ('organism population', I inner cell mass https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg + + + + + + + + - - - - - - + Wikipedia - - - - - - + Wikipedia @@ -285145,12 +285004,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -285183,15 +285037,14 @@ Classes for population already exist in IDO ('organism population', I trophoblast https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg + + + + - - - - - - + MP-def PMID:19829370 @@ -285258,12 +285111,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A flattened, almost circular bilaminar plate of cells formed when the inner cell mass (aka embryoblast) forms two epithelial layers, each of a distinct lineage, separated by an extracellular basement membrane: the external (dorsal) layer is called the epiblast and the internal (ventral) layer is called the hypoblast (aka primitive endoderm); together, they compose the bilaminar embryonic disc. embryonic disc embryonic shield @@ -285283,15 +285131,14 @@ Classes for population already exist in IDO ('organism population', I bilaminar disc http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png + + + + - - - - - - + Wikipedia @@ -285392,14 +285239,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Nonparenchymatous organ that primarily consists of dense connective tissue organized into a sheet which interconnects two or more organs, separates two or more body spaces from one another, or surrounds an organ or body part. Examples: interosseous membrane of forearm, obturator membrane, tympanic membrane, fibrous pericardium, fascia lata, dura mater. [FMA]. - + 2009-07-30T05:19:13Z membrane FMA:7145 @@ -285408,15 +285250,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0000094 membrane organ + + + + - - - - - - + FMA-def @@ -285439,16 +285280,11 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Portion of neural crest that develops from the dorsal neural tube. It overlaps the vagal neural crest and migrates to populate the pharyngeal arches 3, 4 and 6 (producing structures in the head) and to the heart, forming connective tissue that separates the great vessels of the heart. [Wikipedia]. A subpopulation of the cephalic neural crest that emerges from the otic level to the anterior limit of somite 4. It migrates to the heart and is essential for the septation of the outflow track[DOI:10.1242/dev.091751]. ZFA treats this as a subtype of NC. - + 2009-07-30T07:57:38Z TAO:0002173 Wikipedia:Cardiac_neural_crest @@ -285461,15 +285297,14 @@ Classes for population already exist in IDO ('organism population', I cardiac neural crest + + + + - - - - - - + Wikipedia @@ -285936,12 +285771,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -285977,15 +285807,14 @@ Classes for population already exist in IDO ('organism population', I gastrula stage + + + + - - - - - - + BILS @@ -286399,12 +286228,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -286432,6 +286256,10 @@ Classes for population already exist in IDO ('organism population', I lung bud http://upload.wikimedia.org/wikipedia/commons/7/71/Gray948.png + + + + @@ -286441,12 +286269,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -286558,12 +286381,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -286589,15 +286407,14 @@ Classes for population already exist in IDO ('organism population', I neural nucleus + + + + - - - - - - + we limit this structure by definition to chordate and vertebrate nervous systems @@ -286740,12 +286557,6 @@ Classes for population already exist in IDO ('organism population', I UBERON:0000154 posterior region of body - - - - - lexical - @@ -286814,12 +286625,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -286858,15 +286664,14 @@ Classes for population already exist in IDO ('organism population', I anal canal https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png + + + + - - - - - - + Wikipathways:WP2062 @@ -287049,18 +286854,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -287093,26 +286888,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0000162 cloaca + + + + + + + + - - - - - - + ZFA - - - - - - + AAO @@ -287195,18 +286988,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -287225,26 +287008,24 @@ Classes for population already exist in IDO ('organism population', I embryonic cloaca + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -287752,12 +287533,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -287803,15 +287579,14 @@ Classes for population already exist in IDO ('organism population', I pair of lungs + + + + - - - - - - + FMA-abduced @@ -287987,30 +287762,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - - - - - - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -288018,8 +287778,8 @@ Classes for population already exist in IDO ('organism population', I Highly specialized circulating tissue consisting of several types of cells suspended in a fluid medium known as plasma.[AAO] relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO] Recent findings strongly suggest that the molecular pathways involved in the development and function of blood cells are highly conserved among vertebrates and various invertebrates phyla. (...) There is now good reason to believe that, in vertebrates and invertebrates alike, blood cell lineages diverge from a common type of progenitor cell, the hemocytoblast.[well established][VHOG] - - + + AAO:0000046 BTO:0000089 CALOHA:TS-0079 @@ -288054,37 +287814,34 @@ Classes for population already exist in IDO ('organism population', I blood + + + + + + + + + + + + - - - - - - + CL:tm - - - - - - + https://github.com/obophenotype/uberon/issues/1330 - - - - - - + Bgee:AN @@ -288175,7 +287932,7 @@ Classes for population already exist in IDO ('organism population', I Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs. - + 2009-04-08T04:38:19Z CARO:0000081 uberon @@ -288200,12 +287957,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -288240,6 +287992,10 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/9/97/Gray136.png https://upload.wikimedia.org/wikipedia/commons/5/5b/Frontal_bone.png + + + + @@ -288249,12 +288005,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -288362,12 +288113,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -288400,15 +288146,14 @@ Classes for population already exist in IDO ('organism population', I atlanto-occipital joint http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png + + + + - - - - - - + FMA-abduced-lr @@ -288772,12 +288517,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The branched tubular glands found in the mucosa of the fundus and body of the stomach which contain parietal cells that secrete hydrochloric acid and zymogenic cells that produce pepsin. BTO:0000503 EMAPA:27181 @@ -288788,6 +288528,10 @@ Classes for population already exist in IDO ('organism population', I gastric gland + + + + @@ -288797,12 +288541,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ISBN:0073040584 @@ -289755,12 +289494,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -289787,6 +289521,10 @@ Classes for population already exist in IDO ('organism population', I syncytiotrophoblast http://upload.wikimedia.org/wikipedia/commons/d/df/Gray36.png + + + + @@ -289796,12 +289534,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EMAPA @@ -290921,12 +290654,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -290968,15 +290696,14 @@ Classes for population already exist in IDO ('organism population', I organism substance + + + + - - - - - - + this relationship may be too strong and may be weakened in future @@ -292063,12 +291790,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -292112,15 +291834,14 @@ Classes for population already exist in IDO ('organism population', I epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + - - - - - - + http://palaeos.com/metazoa/porifera/homoscleromorpha.html @@ -292721,12 +292442,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -292763,15 +292479,14 @@ Classes for population already exist in IDO ('organism population', I abdomen + + + + - - - - - - + MA @@ -293034,12 +292749,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -293077,15 +292787,14 @@ Classes for population already exist in IDO ('organism population', I ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png + + + + - - - - - - + Bgee:AN @@ -293144,12 +292853,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -293186,15 +292890,14 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png + + + + - - - - - - + Bgee:AN @@ -293255,12 +292958,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293311,6 +293009,10 @@ Classes for population already exist in IDO ('organism population', I mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png + + + + @@ -293320,12 +293022,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bgee:AN @@ -293537,12 +293234,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293566,10 +293258,10 @@ Classes for population already exist in IDO ('organism population', I An inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage.[TAO] Inward fold on the surface of the embryonic ectoderm that develops into part of the anal passage.[AAO] proctodeal - - - - + + + + AAO:0011087 EHDAA2:0000121 EMAPA:25038 @@ -293592,6 +293284,10 @@ Classes for population already exist in IDO ('organism population', I proctodeum https://github.com/obophenotype/uberon/issues/685 + + + + @@ -293601,12 +293297,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -293679,12 +293370,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293725,12 +293411,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293810,6 +293491,14 @@ Classes for population already exist in IDO ('organism population', I stomach https://upload.wikimedia.org/wikipedia/commons/e/e0/Stomach_diagram.svg + + + + + + + + @@ -293825,24 +293514,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + absent in lampreys and hagfishes ISBN:0073040584 - - - - - - + ISBN:0486692132 @@ -293930,12 +293609,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -293984,6 +293658,10 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb https://upload.wikimedia.org/wikipedia/commons/9/91/Aorta_scheme.jpg + + + + @@ -293993,12 +293671,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -294078,12 +293751,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -294192,15 +293860,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + + + + - - - - - - + MA @@ -294396,12 +294063,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -294426,12 +294088,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP]. requires review for applicability to invertebrate structures, e.g. synganglion @@ -294439,7 +294096,7 @@ Classes for population already exist in IDO ('organism population', I Part of the central nervous system situated within the cranium and composed of both nerve cell bodies and nerve fibers.[AAO] The part of the central nervous system contained within the cranium, comprising the forebrain, midbrain, hindbrain, and metencephalon. It is derived from the anterior part of the embryonic neural tube (or the encephalon). Does not include retina. (CUMBO) (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2).[well established][VHOG] - + AAO:0010478 ABA:Brain BAMS:Br @@ -294495,6 +294152,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + + + + + + + + @@ -294504,23 +294169,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + Bgee:AN @@ -294773,24 +294428,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -294815,12 +294455,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -294876,48 +294511,44 @@ Classes for population already exist in IDO ('organism population', I cornea http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + + + + + + + + + + + + + - - - - - - + MA - - - - - - + MA - - - - - - + FMA-isa - - - - - - + definitional @@ -295107,24 +294738,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -295135,12 +294751,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -295197,48 +294808,44 @@ Classes for population already exist in IDO ('organism population', I retina http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png + + + + + + + + + + + + + + + + - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA - - - - - - + EHDAA2 @@ -295312,18 +294919,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -295359,26 +294956,24 @@ Classes for population already exist in IDO ('organism population', I eye + + + + + + + + - - - - - - + PMID:21062451 - - - - - - + PMID:21062451 @@ -295549,10 +295144,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -295566,12 +295158,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -295638,15 +295225,14 @@ Classes for population already exist in IDO ('organism population', I pleura http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png + + + + - - - - - - + https://github.com/obophenotype/uberon/issues/86 @@ -295821,12 +295407,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -295895,15 +295476,14 @@ Classes for population already exist in IDO ('organism population', I pons http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png + + + + - - - - - - + neuronames @@ -296021,7 +295601,7 @@ Classes for population already exist in IDO ('organism population', I Anatomical system which consists of organs and tissues associated with sexual reproduction of the organism.[AAO] Arguably, one of the most important aspects of urbilaterian organogenesis would have been gonadogenesis, since Urbilateria must have successfully generated gametes and developed a strategy for extrusion and fertilization, in order to be the ancestor of all living Bilateria.[well established][VHOG] - 2022-06-10T18:22:34Z + 2022-06-10T18:22:34Z AAO:0010258 BILA:0000103 BTO:0000081 @@ -297705,12 +297285,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -297777,15 +297352,14 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png + + + + - - - - - - + Bgee:AN @@ -297889,12 +297463,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -297949,6 +297518,10 @@ Classes for population already exist in IDO ('organism population', I central nervous system + + + + @@ -297959,12 +297532,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bgee:AN @@ -298191,12 +297759,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A nerve that transmits from sensory receptors on the surface of the body to the central nervous system. AEO:0000201 EHDAA2:0003200 @@ -298211,15 +297774,14 @@ Classes for population already exist in IDO ('organism population', I sensory nerve + + + + - - - - - - + AEO @@ -298376,18 +297938,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP]. consider splitting class One of the extraembryonic fetal membranes that balloons out from the fetal midgut. [TFD][VHOG] @@ -298418,6 +297970,14 @@ Classes for population already exist in IDO ('organism population', I yolk sac http://upload.wikimedia.org/wikipedia/commons/1/17/Gray22.png + + + + + + + + @@ -298433,23 +297993,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ISBN:0073040584 - - - - - - + ISBN:0073040584 @@ -298609,12 +298159,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED]. A funnel-shaped fibromuscular tube that conducts food to the ESOPHAGUS, and air to the LARYNYX and LUNGS. It is located posterior to the NASAL CAVITY; ORAL CAVITY; and LARYNX, and extends from the SKULL BASE to the inferior border of the CRICOID CARTILAGE anteriorly and to the inferior border of the C6 vertebra posteriorly. It is divided into the NASOPHARYNX; OROPHARYNX; and HYPOPHARYNX (laryngopharynx)[MESH:A03.867]. Anatomical cavity bounded by the derivatives of the branchial arches.[AAO] @@ -298656,15 +298201,14 @@ Classes for population already exist in IDO ('organism population', I Consider generalizing to deuterostome pharynx chordate pharynx + + + + - - - - - - + EHDAA2 @@ -298967,12 +298511,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -299009,15 +298548,14 @@ Classes for population already exist in IDO ('organism population', I hindgut http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png + + + + - - - - - - + Wikipedia @@ -299273,30 +298811,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - - - - - - - + + @@ -299350,6 +298873,18 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb + + + + + + + + + + + + @@ -299360,34 +298895,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + EHDAA2 - - - - - - + ISBN:0073040584 @@ -299495,12 +299015,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -299547,6 +299062,10 @@ Classes for population already exist in IDO ('organism population', I ventral pancreatic duct http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png + + + + @@ -299556,12 +299075,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -299646,12 +299160,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A zone of skin that is part of a back [Automatically generated definition]. EMAPA:36392 FMA:10462 @@ -299668,6 +299177,10 @@ Classes for population already exist in IDO ('organism population', I EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region skin of back + + + + @@ -299677,12 +299190,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -299716,24 +299224,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP]. not homologous to the external carotid of zebrafish (Goodrich, 1958) - http://zfish.nichd.nih.gov/zfatlas/Intro%20Page/comparative.html; check XAO @@ -299766,6 +299259,18 @@ Classes for population already exist in IDO ('organism population', I https://sourceforge.net/tracker/?func=detail&aid=3486863&group_id=76834&atid=1127722 http://upload.wikimedia.org/wikipedia/commons/1/13/External_carotid_a.gif + + + + + + + + + + + + @@ -299775,34 +299280,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + EHDAA2 - - - - - - + FMA @@ -300113,24 +299603,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + @@ -300171,6 +299651,14 @@ Classes for population already exist in IDO ('organism population', I pericardial cavity + + + + + + + + @@ -300180,23 +299668,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + Wikipedia @@ -300269,12 +299747,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -300306,15 +299779,14 @@ Classes for population already exist in IDO ('organism population', I endocardium of ventricle + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -300452,12 +299924,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -300485,15 +299952,14 @@ Classes for population already exist in IDO ('organism population', I myocardium of ventricle + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -300937,12 +300403,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The second vertebral bone in the vertebral column. Vertebra that is posteriorly adjacent to vertebra 1.[TAO] @@ -300978,15 +300439,14 @@ Classes for population already exist in IDO ('organism population', I vertebral bone 2 + + + + - - - - - - + FMA @@ -301287,12 +300747,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -301303,12 +300758,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -301354,26 +300804,24 @@ Classes for population already exist in IDO ('organism population', I diaphragm + + + + + + + + - - - - - - + PMID:23586979 - - - - - - + definitional @@ -301673,12 +301121,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -301759,15 +301202,14 @@ Classes for population already exist in IDO ('organism population', I vertebral column + + + + - - - - - - + cjm @@ -302202,10 +301644,10 @@ Classes for population already exist in IDO ('organism population', I Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons.[TAO] Tissue which consists of skeletal muscle fibers surrounded by endomysium. Examples: Skeletal muscle tissue of biceps, Skeletal muscle tissue of diaphragm[FMA] This result implies the following views in terms of evolutionary differentiation: (1) Arthropod striated muscle and vertebrate skeletal and cardiac muscles share a common ancestor. In other words, they did not evolve independently (...) (5) The divergence of vertebrate skeletal and cardiac muscles/vertebrate smooth muscle and nonmuscle is at least before that of vertebrates/arthropods. In other words, emergence of skeletal and cardiac musle type tissues preceded the vertebrate/arthropod divergence (ca. 700 MYA).[well established][VHOG] - - - - + + + + skeletal muscle EMAPA:32716 FMA:14069 @@ -302453,12 +301895,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). AEO:0000111 BTO:0002422 @@ -302483,15 +301920,14 @@ Classes for population already exist in IDO ('organism population', I mesothelium http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg + + + + - - - - - - + FMA @@ -302606,12 +302042,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + In anatomy, the superior mesenteric vein (SMV) is a blood vessel that drains blood from the small intestine. At its termination behind the neck of the pancreas, the SMV combines with the splenic vein to form the hepatic portal vein. The SMV lies to the right of the similarly named artery, the superior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted]. BTO:0002783 @@ -302634,15 +302065,14 @@ Classes for population already exist in IDO ('organism population', I superior mesenteric vein http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png + + + + - - - - - - + Wikipedia:Vitelline_vein @@ -302701,12 +302131,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Vein that carries blood away from the liver[ZFA]. todo - add developmental relationships for other taxa @@ -302737,15 +302162,14 @@ Classes for population already exist in IDO ('organism population', I hepatic vein http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png + + + + - - - - - - + FMA-abduced-lr @@ -302970,12 +302394,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -303011,6 +302430,10 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png + + + + @@ -303020,12 +302443,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -303073,12 +302491,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -303133,6 +302546,10 @@ Classes for population already exist in IDO ('organism population', I colon + + + + @@ -303143,12 +302560,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -303214,12 +302626,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity. BTO:0000645 @@ -303251,6 +302658,10 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb + + + + @@ -303260,12 +302671,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -303371,12 +302777,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -303430,6 +302831,10 @@ Classes for population already exist in IDO ('organism population', I pyloric antrum http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg + + + + @@ -303439,12 +302844,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -303949,12 +303349,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -303971,6 +303366,10 @@ Classes for population already exist in IDO ('organism population', I portal lobule + + + + @@ -303980,12 +303379,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA MP @@ -304009,12 +303403,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -304040,15 +303429,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0001172 hepatic acinus + + + + - - - - - - + cjm @@ -304284,30 +303672,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + @@ -304336,6 +303704,22 @@ Classes for population already exist in IDO ('organism population', I common hepatic duct http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg + + + + + + + + + + + + + + + + @@ -304345,45 +303729,25 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + Wikipedia - - - - - - + Wikipedia - - - - - - + definitional @@ -304647,12 +304011,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -304694,15 +304053,14 @@ Classes for population already exist in IDO ('organism population', I peritoneal cavity + + + + - - - - - - + Wikipedia @@ -306344,18 +305702,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A compound tubular submucosal gland found in that portion of the duodenum which is above the hepatopancreatic sphincter (Sphincter of Oddi). The main function of these glands is to produce a mucus-rich alkaline secretion (containing bicarbonate)[WP]. currently defined as equivalent to any submucosal gland in the duodenum. Said to be absent outside mammlian (Andrew 1959) but Ziswiler and Farner (1972) noted similar glands at the gastroduodenal junction of some birds @@ -306381,6 +305729,14 @@ Classes for population already exist in IDO ('organism population', I duodenal gland + + + + + + + + @@ -306390,23 +305746,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA, modified - - - - - - + unclear for Aves ISBN:9780521617147 @@ -306463,12 +305809,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -306514,6 +305855,10 @@ Classes for population already exist in IDO ('organism population', I intestinal villus http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg + + + + @@ -306523,12 +305868,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -306641,12 +305981,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A blood vessel that drains blood from the large intestine that usually terminates when reaching the splenic vein, which goes on to form the portal vein with the superior mesenteric vein (SMV). Anatomical variations include the IMV draining into the confluence of the SMV and splenic vein and the IMV draining in the SMV. The IMV lies to the right of the similarly name artery, the inferior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted]. BTO:0002782 @@ -306670,15 +306005,14 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + FMA/obol @@ -307367,12 +306701,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -307404,6 +306733,10 @@ Classes for population already exist in IDO ('organism population', I interlobular bile duct + + + + @@ -307414,12 +306747,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA MA MP @@ -307561,12 +306889,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -307598,15 +306921,14 @@ Classes for population already exist in IDO ('organism population', I pancreatic acinus + + + + - - - - - - + FMA @@ -307656,24 +306978,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + An endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones[GO]. Organ which secretes a fluid containing enzymes that aid in the digestion of food.[AAO] @@ -307719,37 +307026,34 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pancreas.glb https://upload.wikimedia.org/wikipedia/commons/7/7e/Blausen_0699_PancreasAnatomy2.png + + + + + + + + + + + + - - - - - - + PMID:16417468 - - - - - - + Wikipedia - - - - - - + Wikipedia @@ -307814,12 +307118,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A trabecula that is part of a spleen. EMAPA:35808 @@ -307837,15 +307136,14 @@ Classes for population already exist in IDO ('organism population', I trabecula of spleen + + + + - - - - - - + FMA @@ -308431,12 +307729,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -308466,15 +307759,14 @@ Classes for population already exist in IDO ('organism population', I liver parenchyma + + + + - - - - - - + XAO @@ -308543,12 +307835,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -308598,15 +307885,14 @@ Classes for population already exist in IDO ('organism population', I hepatic sinusoid + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -308671,18 +307957,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -308725,6 +308001,14 @@ Classes for population already exist in IDO ('organism population', I intralobular bile duct + + + + + + + + @@ -308734,23 +308018,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + FMA @@ -308811,17 +308085,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - + Muscle (organ) which is a part of the pelvis. Examples: levator ani,. @@ -308839,20 +308103,19 @@ Classes for population already exist in IDO ('organism population', I muscle of pelvis + + + + + + + + + - - - - - - - - - - - + FMAdef @@ -308905,12 +308168,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The anus and surrounding regions. Encompasses both internal and external regions, where present. Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG] EFO:0000847 @@ -308936,15 +308194,14 @@ Classes for population already exist in IDO ('organism population', I https://github.com/obophenotype/uberon/issues/507 http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png + + + + - - - - - - + cjm @@ -309803,10 +309060,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -309818,12 +309072,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Skeletal element that is composed of bone tissue. @@ -309873,15 +309122,14 @@ Classes for population already exist in IDO ('organism population', I bone element + + + + - - - - - - + VSAO-modified @@ -310080,12 +309328,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310129,15 +309372,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + EHDAA2 @@ -310192,12 +309434,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a pelvic girdle [Automatically generated definition]. Note that in MA, this is a subclass of pelvis muscle; in FMA this is a hindlimb muscle, but recall in FMA hindlimb includes the girdle. UBERON:0003271 @@ -310219,15 +309456,14 @@ Classes for population already exist in IDO ('organism population', I muscle of pelvic girdle + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -310297,12 +309533,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310350,15 +309581,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + left arch 4 in human embryology.ch @@ -310422,12 +309652,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310463,6 +309688,10 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + @@ -310472,12 +309701,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -310616,12 +309840,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310670,15 +309889,14 @@ Classes for population already exist in IDO ('organism population', I abdominal aorta http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png + + + + - - - - - - + FMA @@ -310848,12 +310066,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -310891,6 +310104,10 @@ Classes for population already exist in IDO ('organism population', I common carotid artery plus branches http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg + + + + @@ -310900,12 +310117,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -310977,18 +310189,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + One of two laterally paired arteries that supplies the pectoral appendages, usually branching from the dorsal aorta. Developmental relationships should be added (intersegmental artery and right dorsal aorta in EHDAA2, occipitovertebral artery in XAO) @@ -311026,26 +310228,24 @@ Classes for population already exist in IDO ('organism population', I subclavian artery http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -311229,12 +310429,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -311289,15 +310484,14 @@ Classes for population already exist in IDO ('organism population', I digestive tract + + + + - - - - - - + NCBIBook:NBK10107 @@ -311561,12 +310755,6 @@ Classes for population already exist in IDO ('organism population', I anterior vena cava http://upload.wikimedia.org/wikipedia/commons/b/b4/Venenwinkel.png - - - - - lexical - @@ -311717,12 +310905,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted]. BTO:0000654 @@ -311745,6 +310928,10 @@ Classes for population already exist in IDO ('organism population', I ciliary muscle http://upload.wikimedia.org/wikipedia/commons/2/28/Gray872.png + + + + @@ -311760,12 +310947,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -311883,30 +311065,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + A sphincter muscle that is part of the iris. In humans, it functions to constrict the pupil in bright light or during accommodation. Its dimensions are about 0.75 mm wide by 0.15 mm thick. It is controlled by parasympathetic fibers that originate from the Edinger-Westphal nucleus, travel along the oculomotor nerve (CN III), synapse in the ciliary ganglion, and then enter the eye via the short ciliary nerves. Initially, all the myocytes are of the smooth muscle type, but much later in life, so that ultimately most cells are of the striated muscle type. [WP,unvetted] WP says: It is found in vertebrates and some cephalopods; this class refers to the vertebrate structure @@ -311941,6 +311103,22 @@ Classes for population already exist in IDO ('organism population', I sphincter pupillae http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png + + + + + + + + + + + + + + + + @@ -311950,47 +311128,27 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ISBN:0781772214 - - - - - - + encircles iris dbpedia - - - - - - + encircles iris dbpedia - - - - - - + dbpedia @@ -312097,30 +311255,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + A smooth muscle of the eye, running radially in the iris that functions as a dilator. [WP,unvetted]. It is innervated by the sympathetic system, which acts by releasing noradrenaline, which acts on alpha1-receptors. Thus, when presented with a threatening stimuli that activates the fight-or-flight response, this innervation dilates the iris, thus temporarily letting more light reach the retina @@ -312157,6 +311295,22 @@ Classes for population already exist in IDO ('organism population', I dilatator pupillae http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png + + + + + + + + + + + + + + + + @@ -312166,47 +311320,27 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ISBN:0781772214 - - - - - - + outer margins of iris dbpedia - - - - - - + inner margins of iris dbpedia - - - - - - + dbpedia @@ -312888,30 +312022,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + The first major branch of the abdominal aorta. EHDAA2:0004519 @@ -312943,48 +312057,44 @@ Classes for population already exist in IDO ('organism population', I celiac artery http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png + + + + + + + + + + + + + + + + - - - - - - + ISBN:0073040584 - - - - - - + ISBN:0073040584 - - - - - - + ISBN:0073040584 - - - - - - + ISBN:0073040584 @@ -313105,12 +312215,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -313172,15 +312277,14 @@ Classes for population already exist in IDO ('organism population', I trigeminal nerve https://upload.wikimedia.org/wikipedia/commons/9/99/Gray778_Trigeminal.png + + + + - - - - - - + Wikipedia @@ -313447,12 +312551,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The anterior facial vein (facial vein) commences at the side of the root of the nose, and is a direct continuation of the angular vein where it also receives a small nasal branch. It lies behind the facial artery and follows a less tortuous course. It receives blood from the external palatine vein before it either joins the anterior branch of the retromandibular vein to form the common facial vein, or drains directly into the internal jugular vein. [WP,unvetted]. Vein which collects blood from muscles of the head and drains into the external jugular vein.[AAO] @@ -313476,15 +312575,14 @@ Classes for population already exist in IDO ('organism population', I facial vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png + + + + - - - - - - + FMA @@ -313560,12 +312658,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -313576,9 +312669,9 @@ Classes for population already exist in IDO ('organism population', I consider renaming this 'trigeminal ganglion complex'. The complex may be fused (amniotes) partially fused (xenopus) or separate (sharks) A prominent collection of touch-sensory neurons of the trigeminal or fifth cranial nerve, positioned beside the brain between the eye and the ear. Kimmel et al, 1995.[TAO] In Xenopus, the profundal and the trigeminal ganglia are separate distally but fused at their proximal end as they condense around NF stage 24. - - - + + + AAO:0011107 BAMS:5Gn BAMS:GV @@ -313626,6 +312719,10 @@ Classes for population already exist in IDO ('organism population', I trigeminal ganglion http://upload.wikimedia.org/wikipedia/commons/6/69/Gray776.png + + + + @@ -313635,12 +312732,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bgee:AN @@ -313764,36 +312856,11 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + @@ -313824,6 +312891,26 @@ Classes for population already exist in IDO ('organism population', I occipital bone http://upload.wikimedia.org/wikipedia/commons/2/27/Gray194.png + + + + + + + + + + + + + + + + + + + + @@ -313833,57 +312920,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + basi paired exo and supra occipital bones MA-modified - - - - - - + interparietal (postparietal) - - - - - - + WP - - - - - - + PMID:11523816 @@ -313945,30 +313007,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + An unpaired bone situated at the base of the skull in front of the temporal bone and basilar part of the occipital bone. The sphenoid bone is one of the seven bones that articulate to form the orbit. Its shape somewhat resembles that of a butterfly or bat with its wings extended. part of viscerocranium (facial skeleton) in FMA @@ -313997,6 +313039,22 @@ Classes for population already exist in IDO ('organism population', I sphenoid bone http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg + + + + + + + + + + + + + + + + @@ -314006,45 +313064,25 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + orbito pre and basi sphenoid - - - - - - + pterygoid process - - - - - - + alisphenoid - - - - - - + cjm @@ -314113,12 +313151,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -314154,6 +313187,10 @@ Classes for population already exist in IDO ('organism population', I ethmoid bone http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg + + + + @@ -314163,12 +313200,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + definitional @@ -314251,12 +313283,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -314289,15 +313316,14 @@ Classes for population already exist in IDO ('organism population', I orbit of skull + + + + - - - - - - + FMA-abduced-lr @@ -314475,12 +313501,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -314546,15 +313567,14 @@ Classes for population already exist in IDO ('organism population', I jaw skeleton + + + + - - - - - - + cjm @@ -314764,12 +313784,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -314804,15 +313819,14 @@ Classes for population already exist in IDO ('organism population', I lower jaw region http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png + + + + - - - - - - + Wikipedia:Mandibular_prominence @@ -314995,12 +314009,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -315025,15 +314034,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0001731 cavity of pharynx + + + + - - - - - - + XAO @@ -315312,12 +314320,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -315360,15 +314363,14 @@ Classes for population already exist in IDO ('organism population', I iris + + + + - - - - - - + XAO @@ -315441,12 +314443,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -315498,15 +314495,14 @@ Classes for population already exist in IDO ('organism population', I corneal epithelium http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png + + + + - - - - - - + ISBN:0781772214 @@ -315603,30 +314599,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + - - - - - - + @@ -315668,37 +314649,34 @@ Classes for population already exist in IDO ('organism population', I sclera http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + + + + + + + + + - - - - - - + FMA - - - - - - + ZFA - - - - - - + ISBN:0781772214 @@ -315749,12 +314727,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A skeletal muscle organ that is part of the trunk region. Note that this class excludes smooth muscle elements in the trunk region, such as the internal anal sphincter. This appears to be consistent with other ontologies such as FMA and ZFA which appear to only include skeletal muscles here. In fact the MA class 'trunk muscle' is classified as a 'set of skeletal muscles'. Many ontologies do not appear to have a coherent distinction between an individual muscle and the musculature (i.e. the set of muscles in a region), so we group all together here. @@ -315779,15 +314752,14 @@ Classes for population already exist in IDO ('organism population', I skeletal muscle of trunk + + + + - - - - - - + prolog @@ -315858,12 +314830,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -315902,15 +314869,14 @@ Classes for population already exist in IDO ('organism population', I ciliary body http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + - - - - - - + ISBN:0781772214 @@ -315958,24 +314924,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + @@ -316038,26 +314994,24 @@ Classes for population already exist in IDO ('organism population', I optic choroid http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + + + + + - - - - - - + MA - - - - - - + Wikipedia @@ -316158,12 +315112,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -316212,15 +315161,14 @@ Classes for population already exist in IDO ('organism population', I substantia propria of cornea http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png + + + + - - - - - - + cjm ISBN:0781772214 Wikipedia @@ -316288,33 +315236,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - - - - - - - + + + A double layer covering the ciliary body that produces aqueous humor. BTO:0001770 @@ -316334,6 +315264,18 @@ Classes for population already exist in IDO ('organism population', I ciliary epithelium + + + + + + + + + + + + @@ -316343,34 +315285,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + MP - - - - - - + Wikipedia @@ -316800,12 +315727,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -316841,15 +315763,14 @@ Classes for population already exist in IDO ('organism population', I aqueous humor of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + - - - - - - + FMA def states A and P located_in in EHDAA2 VHOG @@ -316973,18 +315894,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -317017,26 +315928,24 @@ Classes for population already exist in IDO ('organism population', I anterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/b/ba/Cataract_in_human_eye.png + + + + + + + + - - - - - - + FMA - - - - - - + cjm @@ -317088,18 +315997,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -317129,34 +316028,26 @@ Classes for population already exist in IDO ('organism population', I posterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg + + + + + + + + - - - - - - + FMA - - - - - - + cjm - - - - - lexical - @@ -317336,12 +316227,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The elastic, clear, membrane-like structure, that is outer most layer of the lens. The transparent membrane which surrounds the lens of the eye. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG] (...) we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya (reference 1); Although the eye varies greatly in adaptative details among vertebrates, its basic structure is the same in all. The human eye is representative of the design typical for a tetrapod. (...) A watery aqueous humor fills the spaces in the eye in front of the lens (...) (reference 2).[well established][VHOG] @@ -317367,15 +316253,14 @@ Classes for population already exist in IDO ('organism population', I capsule of lens http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png + + + + - - - - - - + EHDAA2 @@ -317545,12 +316430,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -317589,15 +316469,14 @@ Classes for population already exist in IDO ('organism population', I sympathetic ganglion http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png + + + + - - - - - - + DOI:10.1101/gr.157586.113 ISBN:0073040584 @@ -317661,12 +316540,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -317677,12 +316551,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -317725,6 +316594,14 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/9/90/Lips.JPG http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg + + + + + + + + @@ -317734,12 +316611,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + BTO FMA-implicit VHOG @@ -317748,12 +316620,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -318073,24 +316940,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO]. developmental relationships need revised @@ -318143,26 +317000,24 @@ Classes for population already exist in IDO ('organism population', I midbrain http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG + + + + + + + + - - - - - - + definitional - - - - - - + Bgee:AN @@ -318377,18 +317232,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Rostral segment of the hindbrain that has as its parts the pons (where present) and the cerebellum[WP,modified]. Anterior part of the hindbrain ventral to the cerebellum[BIRNLEX:965]. The anterior of two brain vesicles formed by specialization of the rhombencephalon in the developing embryo. It gives rise to cerebellum and pons. [TFD][VHOG] The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG] - + epencephalon BAMS:Met BIRNLEX:965 @@ -318418,15 +317268,14 @@ Classes for population already exist in IDO ('organism population', I metencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg + + + + - - - - - - + definitional @@ -318688,12 +317537,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of a small intestine [Automatically generated definition]. Intestinal epithelium which lines the lumen of the mid intestine.[TAO] BTO:0001258 @@ -318718,15 +317562,14 @@ Classes for population already exist in IDO ('organism population', I epithelium of small intestine + + + + - - - - - - + FMA @@ -319124,12 +317967,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP]. Together, our results reveal a shared basic organization in the tegmental domains of the diencephalon and midbrain of developing lamprey, indicating early appearance of the domain in vertebrate phylogeny.[well established][VHOG] @@ -319170,15 +318008,14 @@ Classes for population already exist in IDO ('organism population', I midbrain tegmentum http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png + + + + - - - - - - + ZFA @@ -319417,12 +318254,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -319481,15 +318313,14 @@ Classes for population already exist in IDO ('organism population', I bile + + + + - - - - - - + 0.3% in humans @@ -319700,12 +318531,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a esophagus [Automatically generated definition]. EMAPA:26987 FMA:63050 @@ -319734,15 +318560,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0001974 lamina propria of esophagus + + + + - - - - - - + FMA @@ -319974,12 +318799,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -320020,15 +318840,14 @@ Classes for population already exist in IDO ('organism population', I epithelium of esophagus + + + + - - - - - - + FMA @@ -320342,18 +319161,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -320366,12 +319175,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -320430,37 +319234,34 @@ Classes for population already exist in IDO ('organism population', I blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg + + + + + + + + + + + + - - - - - - + AEO - - - - - - + EHDAA2 - - - - - - + GO:0072360 @@ -320993,24 +319794,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + An artery that carries deoxygenated blood from heart to the lungs. They are the only arteries (other than umbilical arteries in the fetus) that carry deoxygenated blood.. @@ -321052,38 +319838,35 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png + + + + + + + + + + + + - - - - - - + Wikipedia - - - - - - + EHDAA2 XAO - - - - - - + EHDAA2 @@ -321478,12 +320261,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -321496,12 +320274,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA]. @@ -321552,27 +320325,25 @@ Classes for population already exist in IDO ('organism population', I hindbrain http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg + + + + + + + + - - - - - - + modified-source-relation ABA - - - - - - + Bgee:AN @@ -321937,12 +320708,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The pontine raphe nucleus is one of the raphe nuclei. It is located in the pontine tegmentum. [WP,unvetted]. @@ -321973,15 +320739,14 @@ Classes for population already exist in IDO ('organism population', I pontine raphe nucleus + + + + - - - - - - + Wikipedia @@ -322065,12 +320830,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -322173,15 +320933,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + + + + - - - - - - + some species only have a single lung @@ -322494,24 +321253,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles. assume spelling error for ncit EHDAA2:0004143 @@ -322529,6 +321273,18 @@ Classes for population already exist in IDO ('organism population', I truncus arteriosus + + + + + + + + + + + + @@ -322544,34 +321300,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -322602,12 +321343,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves[GO]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves[ZFA]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves.[TAO] relationship loss: develops_from endocardial ring (TAO:0005072)[TAO] @@ -322639,15 +321375,14 @@ Classes for population already exist in IDO ('organism population', I endocardial cushion http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png + + + + - - - - - - + ZFA @@ -322730,18 +321465,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The sinus venosus is a large cardiac chamber at the inflow tract that receives venous blood from systemic circulation. precedes the atrium on the venous side of the chordate heart. Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four components of the heart. The sinus venosus also acts as a pacemaker and is the first to contract. Kimmel et al, 1995.[TAO] Part of the circulatory system which receives blood from the systemic veins and contracts to pump the blood into the atrium of the heart.[AAO] @@ -322776,26 +321501,24 @@ Classes for population already exist in IDO ('organism population', I sinus venosus http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png + + + + + + + + - - - - - - + VHOG - - - - - - + Bgee:AN @@ -322898,12 +321621,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -322934,12 +321652,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP]. Consider adding a layer-of-skin grouping class for all skin layers @@ -322979,26 +321692,24 @@ Classes for population already exist in IDO ('organism population', I dermis http://upload.wikimedia.org/wikipedia/commons/2/23/EpidermisPainted.svg + + + + + + + + - - - - - - + FMA - - - - - - + definitional @@ -323056,12 +321767,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -323080,12 +321786,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. The hypodermis is used mainly for fat storage[WP]. A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells. Le Guellec et al, 2004.[TAO] @@ -323121,26 +321822,24 @@ Classes for population already exist in IDO ('organism population', I hypodermis http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg + + + + + + + + - - - - - - + ZFA - - - - - - + FMA-modified @@ -323572,18 +322271,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A cardiac ventricle that is in the right side of the heart. The muscular chamber on the right and in front of the left ventricle. It generally receives venous blood from the right atrium and conveys it into the pulmonary artery. [(1988)_Dorian_AF, Amsterdam, Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B._Anatomy, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier's_Encyclopaedic_Dictionary_of_Medicine][VHOG] @@ -323616,26 +322305,24 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + + + + + + + + - - - - - - + PMID:17276708 - - - - - - + cjm @@ -323814,12 +322501,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Cardiac chamber through which blood leaves the heart. A chamber of the heart that receives blood from one or more atria and pumps it by muscular contraction into the arteries.[AAO] One of four heart chambers.[TAO] @@ -323858,15 +322540,14 @@ Classes for population already exist in IDO ('organism population', I cardiac ventricle + + + + - - - - - - + Bgee:AN @@ -323941,12 +322622,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A cardiac ventricle that is in the left side of the heart. Thick-walled muscular chamber constituting the left border and apex of the heart. It receives oxygenated blood from the left atrium through the mitral orifice and send it off into the aorta. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG] @@ -323980,15 +322656,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + + + + - - - - - - + GO @@ -324564,7 +323239,7 @@ Classes for population already exist in IDO ('organism population', I Anatomical organ component composed of a double layer of serous membrane that suspends a viscus from the body wall or connects adjacent viscera and in doing so conveys blood vessels, lymphatics and nerves to and from the viscera. Examples: greater omentum, broad ligament of uterus, sigmoid mesocolon. mesenteric in Uberon, this term is used in the generic sense, not necessarily restricted to the peritoneum, consistent with FMA. WP: 'In anatomy, the mesentery is the double layer of peritoneum that suspends the jejunum and ileum from the posterior wall of the abdomen. Its meaning, however, is frequently extended to include double layers of peritoneum connecting various components of the abdominal cavity.'. TODO - check. Consider FMA:259286 - Region of mesentery. - + AAO:0011061 BTO:0001380 EV:0100083 @@ -324586,12 +323261,6 @@ Classes for population already exist in IDO ('organism population', I mesentery http://upload.wikimedia.org/wikipedia/commons/1/19/Gray1038.png - - - - - PMID:28192867 - @@ -324640,12 +323309,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -324691,15 +323355,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Skin.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-skin.glb + + + + - - - - - - + Wikipathways:WP2062 @@ -325049,12 +323712,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -325106,15 +323764,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spleen.glb https://upload.wikimedia.org/wikipedia/commons/d/d6/Illu_spleen.jpg + + + + - - - - - - + multiple sources - true spleen appear in jawed vertebrates @@ -325172,42 +323829,22 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + - - - - - - - - - - - - + + @@ -325287,6 +323924,22 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb https://upload.wikimedia.org/wikipedia/commons/6/64/Leber_Schaf.jpg + + + + + + + + + + + + + + + + @@ -325298,45 +323951,25 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA - - - - - - + ZFA-weakened - - - - - - + EHDAA2 - - - - - - + http://www.stembook.org/node/512 @@ -325568,12 +324201,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -325644,6 +324272,10 @@ Classes for population already exist in IDO ('organism population', I https://upload.wikimedia.org/wikipedia/commons/b/b1/GallbladderAnatomy-en.svg https://upload.wikimedia.org/wikipedia/commons/f/f4/Abdomal_organs.svg + + + + @@ -325653,12 +324285,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + definitional @@ -326289,12 +324916,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -326333,15 +324955,14 @@ Classes for population already exist in IDO ('organism population', I superior olivary complex http://upload.wikimedia.org/wikipedia/commons/4/46/Gray713.png + + + + - - - - - - + NIFSTD @@ -326440,12 +325061,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -326503,15 +325119,14 @@ Classes for population already exist in IDO ('organism population', I locus ceruleus http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png + + + + - - - - - - + check ZFA NIFSTD @@ -326639,12 +325254,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Nucleus containing parasympathetic neurons giving rise to the parasympathetic division of the facial nerve, innervating the salivary glands (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 703). @@ -326680,15 +325290,14 @@ Classes for population already exist in IDO ('organism population', I superior salivatory nucleus http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png + + + + - - - - - - + definitional @@ -326817,12 +325426,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers[GO]. Layer that lines the lumen of the heart.[TAO] Part of the heart comprised of thin serous membrane, composed of endothelial tissue, that lines the interior of the heart.[AAO] @@ -326864,15 +325468,14 @@ Classes for population already exist in IDO ('organism population', I endocardium http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png + + + + - - - - - - + Bgee:AN @@ -327354,12 +325957,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -327419,6 +326017,10 @@ Classes for population already exist in IDO ('organism population', I integument + + + + @@ -327428,12 +326030,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -327701,12 +326298,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Vasculature that is part of the eye region. not part of the eye in ZFA. Note this changed to a blood vessel in ZFA @@ -327729,15 +326321,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + ISBN:0781772214 @@ -327797,12 +326388,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -327821,7 +326407,7 @@ Classes for population already exist in IDO ('organism population', I Anatomical system that provides locomotion and physical support to the organism.[AAO] There are more than 50,000 extant vertebrate species, representing over 500 million years of evolution. During that time, the vertebrate musculoskeletal systems have adapted to aquatic, terrestrial, fossorial, and arboreal lifestyles, while simultaneously retaining functionally integrated axial and appendicular skeletal systems.[well established][VHOG] musculoskeletal - + AAO:0010546 CALOHA:TS-1311 EMAPA:32714 @@ -327843,15 +326429,14 @@ Classes for population already exist in IDO ('organism population', I musculoskeletal system + + + + - - - - - - + check ctenophore @@ -328136,30 +326721,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - - - - - - - + + Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO). TODO - add superclass to unify with VNC? @@ -328218,37 +326788,34 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spinal_Cord.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spinal_Cord.glb + + + + + + + + + + + + - - - - - - + ZFA - - - - - - + definitional - - - - - - + definitional @@ -328440,12 +327007,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -328496,15 +327058,14 @@ Classes for population already exist in IDO ('organism population', I ventral horn of spinal cord + + + + - - - - - - + FMA-abduced-lr @@ -328804,12 +327365,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -328839,15 +327395,14 @@ Classes for population already exist in IDO ('organism population', I dorsal mesentery http://upload.wikimedia.org/wikipedia/commons/8/85/Gray985.png + + + + - - - - - - + EHDAA2 @@ -329315,12 +327870,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -329361,15 +327911,14 @@ Classes for population already exist in IDO ('organism population', I EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen + + + + - - - - - - + definitional @@ -329475,12 +328024,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a back [Automatically generated definition]. EMAPA:35161 @@ -329494,15 +328038,14 @@ Classes for population already exist in IDO ('organism population', I muscle of back + + + + - - - - - - + prolog @@ -329551,24 +328094,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -329589,8 +328117,8 @@ Classes for population already exist in IDO ('organism population', I (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (3) a stiff, longitudinal rod of turgid cells along the dorsal part of the body that is called a notochord (...).[well established][VHOG] notochordal In between vertebra the notochord becomes the nucleus pulposus, under it degenerates, and at anterior end in some species its tissue merges with some of the cranial bones.. Some organisms retain a post-embryonic notochord. - - + + AAO:0000327 BTO:0001768 CALOHA:TS-0690 @@ -329625,6 +328153,18 @@ Classes for population already exist in IDO ('organism population', I notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + + + + + + + + + @@ -329640,34 +328180,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + http://tolweb.org/Chordata/2499 - - - - - - + ZFA - - - - - - + EHDAA2 @@ -329753,12 +328278,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -329769,12 +328289,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -329826,6 +328341,14 @@ Classes for population already exist in IDO ('organism population', I somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + + + + + @@ -329835,23 +328358,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + GOTAX:0000352 - - - - - - + ZFA @@ -330121,42 +328634,12 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -330196,72 +328679,66 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png + + + + + + + + + + + + + + + + + + + + + + + + - - - - - - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - - - - - - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - - - - - - + BTO - - - - - - + PMID:11523831 - - - - - - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - - - - - - + PMID:11523831 @@ -330634,30 +329111,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + - - - - - - + A region of the serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart. External layer of the heart.[TAO] @@ -330687,37 +329149,34 @@ Classes for population already exist in IDO ('organism population', I EDITOR_NOTE TODO - check links with UBERON:0002425 visceral serous pericardium. develops from proepicardium. WP:Epicardium -- When considered as a part of the pericardium, it is the inner layer, or visceral pericardium, continuous with the serous layer. epicardium + + + + + + + + + + + + - - - - - - + multiple - - - - - - + FMA-inferred - - - - - - + FMA @@ -330904,36 +329363,11 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + @@ -330970,6 +329404,26 @@ Classes for population already exist in IDO ('organism population', I conducting system of heart + + + + + + + + + + + + + + + + + + + + @@ -330979,56 +329433,31 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA @@ -331095,12 +329524,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -331164,6 +329588,10 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/d/d2/Sinoatrial_node_low_mag.jpg http://upload.wikimedia.org/wikipedia/commons/d/de/Sinoatrial_node_2_low_mag.jpg + + + + @@ -331173,12 +329601,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -331455,18 +329878,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -331496,6 +329909,14 @@ Classes for population already exist in IDO ('organism population', I cardiac Purkinje fiber http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png + + + + + + + + @@ -331505,12 +329926,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -331518,12 +329934,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -331665,12 +330076,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -331683,12 +330089,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Serous membrane which is divided into parietal and visceral serous pericardium. EMAPA:19030 FMA:9582 @@ -331702,26 +330103,24 @@ Classes for population already exist in IDO ('organism population', I serous pericardium + + + + + + + + - - - - - - + FMA - - - - - - + FMA @@ -331762,12 +330161,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -331805,15 +330199,14 @@ Classes for population already exist in IDO ('organism population', I peritoneum http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png + + + + - - - - - - + MP @@ -331867,24 +330260,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA]. most superficial part of pericardium; continuous with the outer adventitial layer of the neighboring great blood vessels. [Wikipedia:Pericardium] EMAPA:19029 @@ -331900,6 +330283,14 @@ Classes for population already exist in IDO ('organism population', I fibrous pericardium + + + + + + + + @@ -331909,23 +330300,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + WP @@ -332137,12 +330518,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -332200,15 +330576,14 @@ Classes for population already exist in IDO ('organism population', I bone marrow http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg + + + + - - - - - - + FMA MA @@ -332280,18 +330655,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -332330,26 +330695,24 @@ Classes for population already exist in IDO ('organism population', I defined generically so could in theory encompass FBbt:00003260 'skeletal muscle of head', or the muscle of a starfish Aristotle's lantern, but we restrict this to craniates. Skeletal muscles of the head originate from the non-segmented head mesoderm (Noden, 1983; Wachtler et al., 1984) cranial muscle + + + + + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - - - - - - + EHDAA2-abduced @@ -332424,12 +330787,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle that is part of the cervical (neck) region. EMAPA:36050 @@ -332451,15 +330809,14 @@ Classes for population already exist in IDO ('organism population', I muscle of neck + + + + - - - - - - + prolog @@ -332517,12 +330874,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -332554,15 +330906,14 @@ Classes for population already exist in IDO ('organism population', I muscle of abdomen + + + + - - - - - - + prolog @@ -332614,8 +330965,8 @@ Classes for population already exist in IDO ('organism population', I Portion of tissue that consists of mesodermally derived cells and intercellular matrix comprised of protein fibers and carbohydrates, which supports, ensheathes and binds together other tissues.[TAO] Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance.[VSAO] MA also has set of connective tissues - - + + AAO:0000098 BTO:0000421 CALOHA:TS-2009 @@ -332820,24 +331171,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + @@ -332886,26 +331227,24 @@ Classes for population already exist in IDO ('organism population', I hematopoietic system + + + + + + + + - - - - - - + FMA - - - - - - + definitional @@ -332961,28 +331300,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - + + @@ -333029,27 +331355,25 @@ Classes for population already exist in IDO ('organism population', I bile duct http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png + + + + + + + + - - - - - - + EMAPA MA - - - - - - + XAO @@ -333361,12 +331685,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -333411,15 +331730,14 @@ Classes for population already exist in IDO ('organism population', I visceral pleura + + + + - - - - - - + FMA @@ -333494,12 +331812,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -333545,15 +331858,14 @@ Classes for population already exist in IDO ('organism population', I pleural cavity http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png + + + + - - - - - - + Wikipedia @@ -333724,12 +332036,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A double-walled sac containing the heart and the roots of the great vessels. FMA:9868 RETIRED_EHDAA2:0001443 @@ -333743,15 +332050,14 @@ Classes for population already exist in IDO ('organism population', I pericardial sac http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png + + + + - - - - - - + FMA @@ -333770,12 +332076,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -333834,15 +332135,14 @@ Classes for population already exist in IDO ('organism population', I pericardium http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png + + + + - - - - - - + MA @@ -334035,12 +332335,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -334096,6 +332391,10 @@ Classes for population already exist in IDO ('organism population', I autonomic nervous system http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png + + + + @@ -334105,12 +332404,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EMAPA MA NIFSTD @@ -334543,8 +332837,8 @@ Classes for population already exist in IDO ('organism population', I Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle. (...) the integument of many tetrapods is reinforced by a morphologically and structurally diverse assemblage of skeletal elements. These elements are widely understood to be derivatives of the once all-encompassing dermal skeleton of stem-gnathostomes (...).[well established][VHOG] - - + + UBERON:0007029 AEO:0000154 BILA:0000118 @@ -334743,8 +333037,8 @@ Classes for population already exist in IDO ('organism population', I Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts.[VSAO] relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO] Phylogenetic analysis suggests that cartilage arose independently in cnidarians, hemichordates, vertebrates, arthropods, annelids, brachiopods, and molluscs - or a common ancestor of brachiopods and molluscs (...). Analyses of cartilage as a tissue and of the development of invertebrate cartilages are consistent with homology between invertebrate and vertebrate cartilage. From the discussion above, it will be clear that understanding genetic changes underlying cartilage evolution is key to determining whether the multiple origins of cartilage represent parallel evolution.[well established][VHOG] - - + + AAO:0000060 AEO:0000087 BTO:0000206 @@ -335078,12 +333372,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues. consider including separate class for developmental structure (adult human is stratified; in EHDAA2 is unilaminar) The epithelium that lines the oral cavity. The oral epithelium epithelial cells with many short microvilli as well as mucous cells, rodlet cells and taste buds[ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24]. @@ -335110,15 +333399,14 @@ Classes for population already exist in IDO ('organism population', I oral epithelium + + + + - - - - - - + AAO-modified @@ -335181,18 +333469,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -335220,26 +333498,24 @@ Classes for population already exist in IDO ('organism population', I visceral serous pericardium + + + + + + + + - - - - - - + cjm - - - - - - + FMA @@ -335785,12 +334061,6 @@ Classes for population already exist in IDO ('organism population', I VSAO - - - - - https://github.com/obophenotype/uberon/issues/117 - @@ -335850,27 +334120,14 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - + + @@ -335896,6 +334153,14 @@ Classes for population already exist in IDO ('organism population', I iris epithelium + + + + + + + + @@ -335905,23 +334170,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA - - - - - - + MP @@ -335988,12 +334243,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -336021,15 +334271,14 @@ Classes for population already exist in IDO ('organism population', I trabecula carnea + + + + - - - - - - + WP @@ -336114,12 +334363,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -336130,9 +334374,9 @@ Classes for population already exist in IDO ('organism population', I placement in this class to be inferred Replacement bone that forms within cartilage.[VSAO] some structures, e.g. in ZFA are both intramembrane and endochondral - - - + + + AAO:0010776 AEO:0000083 BTO:0002157 @@ -336153,6 +334397,10 @@ Classes for population already exist in IDO ('organism population', I https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg + + + + @@ -336162,12 +334410,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VSAO @@ -336439,18 +334682,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -336476,6 +334709,14 @@ Classes for population already exist in IDO ('organism population', I tunica media https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg + + + + + + + + @@ -336485,23 +334726,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm - - - - - - + cjm @@ -336539,18 +334770,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The innermost layer of a blood vessel which is a lining of endothelial cells facing the lumen[Kardong]. the FMA class represents a more generic layer which is the superclass of the layer found in both blood vessels and lymph vessels (and also endocardium) - we should probably follow this structure the FMA class represents a structure which may have both epithelium and fibroelastic connective tissue as parts @@ -336575,6 +334796,14 @@ Classes for population already exist in IDO ('organism population', I tunica intima https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg + + + + + + + + @@ -336584,23 +334813,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + check for exceptions, e.g. capillaries - - - - - - + ISBN:0073040584 @@ -336992,24 +335211,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + One of a series of paired bulges that develop along the lateral walls of the foregut. The pharyngeal arches have developmental contributions from endoderm, mesoderm, and neural crest cells and are separated by anterior lateral endoderm out-pockets known as pharyngeal pouches. One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of the embryo.[AAO] A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down.[well established][VHOG] @@ -337045,6 +335249,18 @@ Classes for population already exist in IDO ('organism population', I pharyngeal arch http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png + + + + + + + + + + + + @@ -337054,34 +335270,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + PMID:16313389 - - - - - - + http://tolweb.org/Chordata/2499 - - - - - - + PMID:16313389 @@ -337150,12 +335351,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic. Do not merge with neurogenic placode Comparisons of developmental gene expression suggest that the anterior ectoderm in amphioxus may be homologous to the vertebrate olfactory placode, the only vertebrate placode with primary, not secondary, neurons @@ -337175,6 +335371,10 @@ Classes for population already exist in IDO ('organism population', I cranial placode + + + + @@ -337184,12 +335384,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + PMID:11523831 PMID:22512454 @@ -338184,12 +336379,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -338202,12 +336392,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate. consider adding class for organizer. Consider adding separate class for isthmus as a structure Lampreys also have an MHB [midbrain hindbrain boundary], expressing a similar repertoire of regulatory gene cognates as in gnathostomes.[well established][VHOG] @@ -338237,6 +336422,14 @@ Classes for population already exist in IDO ('organism population', I midbrain-hindbrain boundary + + + + + + + + @@ -338247,23 +336440,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA - - - - - - + ZFA @@ -338309,18 +336492,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A temporary epithelium that derives from the outer layer of the ectdoerm and is shed once the inner layer differentiates to form a true epidermis. The outermost epidermal layer covering the fish at embryonic stages; derived from the EVL and thought to eventually be replaced by the superficial stratum of the epidermis. Sometimes used synonymously with EVL. Le Guellec et al, 2004.[TAO] relationship type change: OBO_REL:part_of ectoderm (TAO:0000016) CHANGED TO: develops_from ectoderm (UBERON:0000924)[TAO] @@ -338349,6 +336522,14 @@ Classes for population already exist in IDO ('organism population', I periderm + + + + + + + + @@ -338358,23 +336539,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + ZFA @@ -338540,10 +336711,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -338560,12 +336728,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -338590,15 +336753,14 @@ Classes for population already exist in IDO ('organism population', I presomitic mesoderm + + + + - - - - - - + Bgee:AN @@ -338763,18 +336925,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A horseshoe-shaped thickening of the endoderm at the cranial (rostral) end of the primitive streak formed by the involution of Spemann's organizer cells which, together with the notochord, induces the formation of the neural plate from the overlying ectodermal cells and contributes mesodermal type cells to the surrounding tissue. TODO - check; developmental relationship to anterior hypoblast in ZFA? Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. Kimmel et al, 1995.[TAO] @@ -338799,26 +336951,24 @@ Classes for population already exist in IDO ('organism population', I prechordal plate + + + + + + + + - - - - - - + ZFA - - - - - - + PMID:16313393 @@ -338876,24 +337026,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -338935,37 +337070,34 @@ Classes for population already exist in IDO ('organism population', I intermediate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + + + + + + + + + - - - - - - + AAO - - - - - - + EMAPA - - - - - - + XAO @@ -339168,9 +337300,9 @@ Classes for population already exist in IDO ('organism population', I The ectodermal rudiment of the trigeminal ganglion, distinguishable during much of the segmentation period. Kimmel et al, 1995.[TAO] The dorsolateral placodes (trigeminal and vestibular) develop from ectoderm lateral to the brain (...). In summary, the collective term 'placodes' refers to some rather different structures, probably with different evolutionary origins. Some sensory placodes (at least the otic and olfactory) may have homologues in basal chordates. Even if this is so, it is apparent that they were elaborated considerably during early vertebrate evolution. Epibranchial and dorsolateral placodes appear to be new; we infer that their origin depended on the evolution of specific inductive signals.[well established][VHOG] Consider naming this 'trigeminal placode complex'. Also, Fig9-5 of ISBN:0471888893 calls this the profundus placode; XAO says 'profundal and the trigeminal ganglia are separate distally but fused at their proximal end...' - - - + + + EFO:0003433 EHDAA2:0004209 TAO:0000162 @@ -339278,12 +337410,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -339321,6 +337448,10 @@ Classes for population already exist in IDO ('organism population', I eye primordium + + + + @@ -339330,12 +337461,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + PMID:16496288 XAO @@ -339391,18 +337517,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -339431,26 +337547,24 @@ Classes for population already exist in IDO ('organism population', I optic cup + + + + + + + + - - - - - - + ZFA - - - - - - + ZFA @@ -339516,12 +337630,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -339562,6 +337671,10 @@ Classes for population already exist in IDO ('organism population', I lens placode http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png + + + + @@ -339571,12 +337684,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -339640,24 +337748,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -339689,37 +337782,34 @@ Classes for population already exist in IDO ('organism population', I neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png + + + + + + + + + + + + - - - - - - + GOTAX:0000352 - - - - - - + Wikipedia - - - - - - + Bgee:AN @@ -339839,12 +337929,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -339873,6 +337958,10 @@ Classes for population already exist in IDO ('organism population', I paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + @@ -339882,12 +337971,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bgee:AN @@ -339956,18 +338040,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -339993,6 +338067,14 @@ Classes for population already exist in IDO ('organism population', I epibranchial placode + + + + + + + + @@ -340003,23 +338085,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA - - - - - - + EHDAA2-abduced @@ -340103,12 +338175,6 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003080 anterior neural tube - - - - - lexical - @@ -340129,12 +338195,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -340178,6 +338239,10 @@ Classes for population already exist in IDO ('organism population', I lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png + + + + @@ -340187,12 +338252,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 VHOG @@ -340277,12 +338337,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -340325,6 +338380,10 @@ Classes for population already exist in IDO ('organism population', I myotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png + + + + @@ -340334,12 +338393,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2-abduced @@ -340402,12 +338456,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Trunk portion of the neural crest. The trunk neural crest lies between the vagal and sacral neural crest and gives rise to two groups of cells. One group migrates dorsolateral and populates the skin, forming pigment cells and the other migrates ventrolateral through the anterior sclerotome to become the epinephrine-producing cells of the adrenal gland and the neurons of the sympathetic nervous system. Some cells remain in the sclerotome to form the dorsal root ganglia [Wikipedia]. Post-cranial portion of the neural crest. Exact anatomical derivations not experimentally resolved in amphibians.[AAO] We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG] @@ -340427,15 +338476,14 @@ Classes for population already exist in IDO ('organism population', I trunk neural crest + + + + - - - - - - + ZFA @@ -340479,30 +338527,15 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + - - - - - - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -340522,6 +338555,18 @@ Classes for population already exist in IDO ('organism population', I heart primordium + + + + + + + + + + + + @@ -340531,34 +338576,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA - - - - - - + ZFA - - - - - - + XAO @@ -340690,18 +338720,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -340729,6 +338749,14 @@ Classes for population already exist in IDO ('organism population', I sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png + + + + + + + + @@ -340744,23 +338772,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VHOG:0000680 - - - - - - + ZFA @@ -340995,8 +339013,8 @@ Classes for population already exist in IDO ('organism population', I Anatomical structure that overlaps the outer epithelial layer and is adjacent to the space surrounding the organism. consider obsoleting. See issue/1305 Organism subdivision which is the collection of anatomical structures on the body surface.[ZFA] - - + + AAO:0010337 AEO_RETIRED:0000010 EHDAA2_RETIRED:0003010 @@ -342964,18 +340982,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -343007,26 +341015,24 @@ Classes for population already exist in IDO ('organism population', I skeleton of lower jaw + + + + + + + + - - - - - - + EHDAA2 - - - - - - + VHOG-modified @@ -343102,20 +341108,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -343142,6 +341140,10 @@ Classes for population already exist in IDO ('organism population', I mesentery of stomach + + + + @@ -343151,12 +341153,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -343468,21 +341465,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Racemose mucous glands beneath the mucous membrane of the pharynx. BTO:0004849 EHDAA2:0001461 @@ -343495,15 +341484,14 @@ Classes for population already exist in IDO ('organism population', I pharyngeal gland + + + + - - - - - - + BTO @@ -343612,12 +341600,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A blood island that is part of a mesoderm. in EHDAA2, gives rise to blood and dorsal aorta UBERON:0003305 @@ -343630,6 +341613,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003304 mesoderm blood island + + + + @@ -343639,12 +341626,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -343697,12 +341679,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a developing camera-type eye. TODO - change mesenchyme relationships to precursor_of EHDAA2:0000485 @@ -343714,15 +341691,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003314 eye mesenchyme + + + + - - - - - - + EHDAA2 @@ -343916,12 +341892,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a developing upper jaw [Automatically generated definition]. EHDAA2:0002124 EHDAA:8031 @@ -343934,15 +341905,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003323 mesenchyme of upper jaw + + + + - - - - - - + EHDAA2 @@ -343994,12 +341964,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a developing lower jaw [Automatically generated definition]. EHDAA2:0001024 EHDAA:8003 @@ -344012,15 +341977,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003324 mesenchyme of lower jaw + + + + - - - - - - + EHDAA2 @@ -345412,28 +343376,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - + + An epithelium that is part of a pharynx [Automatically generated definition]. Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side. Chen et al, 2007.[TAO] BSA:0000112 @@ -345453,26 +343404,24 @@ Classes for population already exist in IDO ('organism population', I pharyngeal epithelium + + + + + + + + - - - - - - + ZFA - - - - - - + ZFA @@ -345524,20 +343473,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + An epithelium that is part of a midgut. BTO:0005053 EHDAA2:0001195 @@ -345550,15 +343491,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003352 epithelium of midgut + + + + - - - - - - + BTO @@ -345851,12 +343791,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -345869,12 +343804,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An unilaminar epithelium that surrounds a pelvic appendage bud. UBERON:0005232 EHDAA2:0001034 @@ -345890,26 +343820,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003371 pelvic appendage bud ectoderm + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -345977,12 +343905,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -345995,12 +343918,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An unilaminar epithelium that surrounds a pectoral appendage bud. UBERON:0005231 UBERON:0005663 @@ -346017,26 +343935,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003372 pectoral appendage bud ectoderm + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -348476,21 +346392,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A bone that is part of a facial skeleton [Automatically generated definition]. test whether 'facial bone' is an exact synonym EMAPA:19019 @@ -348511,15 +346419,14 @@ Classes for population already exist in IDO ('organism population', I facial bone + + + + - - - - - - + MA @@ -348717,12 +346624,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The superior labial artery (superior labial branch of facial artery) is larger and more tortuous than the inferior labial artery. It follows a similar course along the edge of the upper lip, lying between the mucous membrane and the Orbicularis oris, and anastomoses with the artery of the opposite side. It supplies the upper lip, and gives off in its course two or three vessels which ascend to the nose; a septal branch ramifies on the nasal septum as far as the point of the nose, and an alar branch supplies the ala of the nose. EMAPA:37430 @@ -348739,15 +346641,14 @@ Classes for population already exist in IDO ('organism population', I artery of upper lip + + + + - - - - - - + FMA @@ -348813,12 +346714,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The inferior labial artery (inferior labial branch of facial artery) arises near the angle of the mouth; it passes upward and forward beneath the Triangularis and, penetrating the Orbicularis oris, runs in a tortuous course along the edge of the lower lip between this muscle and the mucous membrane. It supplies the labial glands, the mucous membrane, and the muscles of the lower lip; and anastomoses with the artery of the opposite side, and with the mental branch of the inferior alveolar artery. EMAPA:37429 @@ -348836,15 +346732,14 @@ Classes for population already exist in IDO ('organism population', I artery of lower lip + + + + - - - - - - + FMA @@ -349354,12 +347249,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An endothelium of capillary that is part of a respiratory system [Automatically generated definition]. EMAPA:37575 MA:0001808 @@ -349390,15 +347280,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003489 respiratory system capillary endothelium + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -349630,12 +347519,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An arteriole that is part of a respiratory system [Automatically generated definition]. EMAPA:37568 MA:0001803 @@ -349643,15 +347527,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003495 respiratory system arteriole + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -349685,12 +347568,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A blood vessel that is part of a head [Automatically generated definition]. EMAPA:36610 MA:0000575 @@ -349702,15 +347580,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003496 head blood vessel + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -353745,20 +351622,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -353785,6 +351654,10 @@ Classes for population already exist in IDO ('organism population', I intrahepatic bile duct + + + + @@ -353794,12 +351667,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -354785,12 +352653,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a thorax [Automatically generated definition]. MA:0000561 muscle organ of thorax @@ -354800,15 +352663,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003830 thoracic segment muscle + + + + - - - - - - + prolog @@ -354920,12 +352782,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a esophagus [Automatically generated definition]. merge muscle and muscle layer? EMAPA:26983 @@ -354942,15 +352799,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003832 esophagus muscle + + + + - - - - - - + MA @@ -355809,20 +353665,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A neural plate that develops_from a future spinal cord. Neural plate that is part of the spinal cord. [Bgee_curator][VHOG] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...)[well established][VHOG] @@ -355835,15 +353683,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003854 spinal cord neural plate + + + + - - - - - - + ZFA @@ -356046,12 +353893,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -356067,15 +353909,14 @@ Classes for population already exist in IDO ('organism population', I intraembryonic coelom + + + + - - - - - - + Wikipedia @@ -356171,18 +354012,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -356216,6 +354047,14 @@ Classes for population already exist in IDO ('organism population', I liver primordium + + + + + + + + @@ -356231,23 +354070,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + ventral foregut endoderm Zaret 1996 @@ -356370,12 +354199,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -356395,15 +354219,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0003898 skeletal muscle tissue of trunk + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -356464,10 +354287,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -356484,12 +354304,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the retina that contains neurons and photoreceptor cells[GO]. (...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG] @@ -356521,15 +354336,14 @@ Classes for population already exist in IDO ('organism population', I retinal neural layer + + + + - - - - - - + Bgee:AN @@ -356811,12 +354625,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -356846,15 +354655,14 @@ Classes for population already exist in IDO ('organism population', I pancreas primordium http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png + + + + - - - - - - + Wikipedia @@ -356896,36 +354704,16 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + - - - - - - - - - - - - + + The embryonic pancreas develops from two separate anlagen in the foregut epithelium, one dorsal and two ventral pancreatic buds[PMID]. EFO:0003470 EMAPA:35645 @@ -356946,6 +354734,22 @@ Classes for population already exist in IDO ('organism population', I http://upload.wikimedia.org/wikipedia/commons/4/49/Suckale08FBS_fig1_pancreas_development.jpeg http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png + + + + + + + + + + + + + + + + @@ -356955,46 +354759,26 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + Wikipedia:Pancreas#Embryological_development - - - - - - + zebrafish Wikipedia:Pancreatic_bud - - - - - - + EHDAA2-inferred @@ -357036,18 +354820,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Pancreatic bud that gives rise to the accessory pancreatic duct. The pancreatic bud that gives rise to the accessory pancreatic duct.[AAO] In chick, Xenopus laevis, and the teleost fish Medaka, the pancreas develops from three buds that emerge from the gut tube, two from its ventral aspect, and one from its dorsal aspect. In mouse, although there are initially three buds that arise from the gut tube at the point of contact between the endoderm and the vasculature, the pancreas develops from only two of these buds, one dorsal and one ventral. (...) In this study, we use a transgenic zebrafish line (...). We provide evidence for the existence of two distinct pancreatic anlagen - a ventral anterior bud and a dorsal posterior bud - that join to form the definitive pancreas (reference 1); The pancreas develops from the fusion of distinct endoderm-derived dorsal and ventral diverticula. In humans, by day 35 of development, the ventral pancreatic bud begins to migrate backwards and comes into contact and eventually fuses with the dorsal pancreatic bud during the sixth week of development (reference 2).[well established][VHOG] @@ -357075,26 +354849,24 @@ Classes for population already exist in IDO ('organism population', I dorsal pancreatic bud http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png + + + + + + + + - - - - - - + EHDAA2 - - - - - - + XAO @@ -357141,18 +354913,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Pancreatic bud that gives rise to the major pancreatic duct. In chick, Xenopus laevis, and the teleost fish Medaka, the pancreas develops from three buds that emerge from the gut tube, two from its ventral aspect, and one from its dorsal aspect. In mouse, although there are initially three buds that arise from the gut tube at the point of contact between the endoderm and the vasculature, the pancreas develops from only two of these buds, one dorsal and one ventral. (...) In this study, we use a transgenic zebrafish line (...). We provide evidence for the existence of two distinct pancreatic anlagen - a ventral anterior bud and a dorsal posterior bud - that join to form the definitive pancreas (reference 1); The pancreas develops from the fusion of distinct endoderm-derived dorsal and ventral diverticula. In humans, by day 35 of development, the ventral pancreatic bud begins to migrate backwards and comes into contact and eventually fuses with the dorsal pancreatic bud during the sixth week of development (reference 2).[well established][VHOG] The ventral pancreatic bud becomes the head and uncinate process, and comes from the hepatic diverticulum[WP] @@ -357180,26 +354942,24 @@ Classes for population already exist in IDO ('organism population', I ventral pancreatic bud http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png + + + + + + + + - - - - - - + EHDAA2 - - - - - - + PMID:16417468 WP @@ -357822,12 +355582,6 @@ Classes for population already exist in IDO ('organism population', I posterior stroma of cornea - - - - - lexical - @@ -358036,12 +355790,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A transitional population of migrating mesenchymal cells that derive from somites and that will become dermal cells. Not to be confused with 'dermatome segment of skin'. AAO:0011028 @@ -358068,6 +355817,10 @@ Classes for population already exist in IDO ('organism population', I dermatome http://upload.wikimedia.org/wikipedia/commons/f/f3/Gray64.png + + + + @@ -358077,12 +355830,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2-abduced @@ -358208,12 +355956,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -358240,15 +355983,14 @@ Classes for population already exist in IDO ('organism population', I biliary ductule + + + + - - - - - - + BTO @@ -358333,12 +356075,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium. consider merging with 'ventricular zone'; note that the MA class probably does not belong here, as this is an embryonic structure The layer of undifferentiated, proliferating cells that line the neural tube lumen @@ -358356,6 +356093,10 @@ Classes for population already exist in IDO ('organism population', I neural tube ventricular layer + + + + @@ -358365,12 +356106,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + NCBIBook:NBK10047 @@ -358431,12 +356167,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -358460,6 +356191,10 @@ Classes for population already exist in IDO ('organism population', I neural tube mantle layer + + + + @@ -358469,12 +356204,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + by division NCBIBook:NBK10047 @@ -358512,12 +356242,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -358534,15 +356259,14 @@ Classes for population already exist in IDO ('organism population', I neural tube marginal layer + + + + - - - - - - + forms from axons @@ -358584,12 +356308,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -358614,15 +356333,14 @@ Classes for population already exist in IDO ('organism population', I neural tube basal plate + + + + - - - - - - + Shh Swenson @@ -358738,24 +356456,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + The central area of the two limbs of a horseshoe-shaped mesenchymal swelling that lie medial to the olfactory placode or pit in the future nasal region of the embryo; it joins with the ipsilateral maxillary prominence in the formation of half of the upper jaw, and the nasal tip and philtrum of the upper lip develop from it. Fusion of right and left medial nasal processes forms a primary palate rostrally and the nasal septum caudally. The incisive bone, including upper incisor teeth and the rostral up- per lip, are derived from the primary palate. The nasal septum consists of bone, cartilage, and a patch of soft tissue membrane that separates right & left halves of the nasal cavity. EHDAA2:0001076 @@ -358776,26 +356484,24 @@ Classes for population already exist in IDO ('organism population', I medial nasal prominence http://upload.wikimedia.org/wikipedia/commons/8/85/Gray45.png + + + + + + + + - - - - - - + EHDAA2 - - - - - - + Wikipedia @@ -359586,12 +357292,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A myocardium trabecular layer that is part of a cardiac ventricle. TODO - check FMA FMA:83511 @@ -359605,15 +357306,14 @@ Classes for population already exist in IDO ('organism population', I trabecular layer of ventricle + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -359648,24 +357348,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -359698,37 +357383,34 @@ Classes for population already exist in IDO ('organism population', I optic vesicle http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray863.png + + + + + + + + + + + + - - - - - - + ZFA - - - - - - + GO-def - - - - - - + ZFA @@ -359878,18 +357560,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -359902,26 +357574,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004140 primary heart field + + + + + + + + - - - - - - + GO:0003128 - - - - - - + https://orcid.org/0000-0003-3308-6245 @@ -359980,12 +357650,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -360005,15 +357670,14 @@ Classes for population already exist in IDO ('organism population', I heart tube + + + + - - - - - - + ZFA-modified @@ -360158,18 +357822,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. the intraventricular conduction system from the bundle of His to the distal Purkinje fibers, which carries the impulse to the ventricles. HPS @@ -360180,6 +357834,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004146 His-Purkinje system + + + + + + + + @@ -360189,23 +357851,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + GO - - - - - - + PMID:12626327 PMID:21234997 github:michaelerice @@ -360380,18 +358032,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + An embryonic group of progenitor cells that forms from an outpouching of the septum transversum near the venous pole of the heart and gives rise to the epicardium. propepicardial Proepicardial clusters in Zebrafish form on the pericardial wall, adjacent to the atrioventricular (AV) junction and near the venous pole[ZFA] @@ -360403,26 +358045,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004160 proepicardium + + + + + + + + - - - - - - + todo check other taxa - - - - - - + ZFA @@ -360903,18 +358543,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A portion of smooth muscle tissue that is part of a large intestine [Automatically generated definition]. MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa EMAPA:35469 @@ -360930,26 +358560,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004220 large intestine smooth muscle + + + + + + + + - - - - - - + MA - - - - - - + consider merging @@ -361030,12 +358658,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -361072,15 +358695,14 @@ Classes for population already exist in IDO ('organism population', I intestine smooth muscle + + + + - - - - - - + consider merging @@ -362132,12 +359754,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of smooth muscle tissue that is part of a small intestine [Automatically generated definition]. MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa EMAPA:35783 @@ -362162,15 +359779,14 @@ Classes for population already exist in IDO ('organism population', I small intestine smooth muscle + + + + - - - - - - + consider merging @@ -362937,21 +360553,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -362967,15 +360575,14 @@ Classes for population already exist in IDO ('organism population', I eye muscle + + + + - - - - - - + MA @@ -363065,12 +360672,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The bilaminar epithelium formed from the myotome and dermatome. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis. Within the dermomyotome there is also a medio-lateral difference. The central region makes dermis, the mesenchymal connective tissue of the back skin. The medial region (closest to neural tube) makes epaxial muscle, and the lateral region (furthest from neural tube) makes hypaxial muscle[http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=eurekah&part=A66768]. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis.[TAO] @@ -363093,6 +360695,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004290 dermomyotome + + + + @@ -363108,12 +360714,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 ZFA @@ -363397,24 +360998,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + Outermost layer of cells in the blastodermic vesicle, which will develop into the trophoblast layer and then contact the endometrium and take part in establishing the embryo's means of nutrition. distinction between trophectoderm and trophoblast unclear/inconsistent in many sources The outer cellular layer of the mammalian blastocyst. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.750, see_Kardong_KV][VHOG] @@ -363432,6 +361023,14 @@ Classes for population already exist in IDO ('organism population', I trophectoderm + + + + + + + + @@ -363441,23 +361040,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -363860,12 +361449,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -363921,15 +361505,14 @@ Classes for population already exist in IDO ('organism population', I pharyngeal arch artery http://upload.wikimedia.org/wikipedia/commons/8/84/Gray473.png + + + + - - - - - - + ZFA @@ -364181,17 +361764,12 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP]. Acellular anatomical structure composed of collagen, Descemet's membrane is secreted as a basement membrane of the corneal endothelium. Located between the stroma and the corneal endothelium, it is approximately 0.15 micrometer thick at 6 months post-fertilization.[ZFIN] - - + + EMAPA:18804 FMA:58309 GAID:894 @@ -364218,15 +361796,14 @@ Classes for population already exist in IDO ('organism population', I Descemet's membrane https://github.com/obophenotype/uberon/issues/15 + + + + - - - - - - + Cline et al @@ -364358,12 +361935,6 @@ Classes for population already exist in IDO ('organism population', I anterior limiting lamina of cornea - - - - - lexical - @@ -365633,20 +363204,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A portion of cardiac muscle tissue that is part of a myocardium [Automatically generated definition]. Note placement of MA class based on parthood relationship EMAPA:32688 @@ -365657,15 +363220,14 @@ Classes for population already exist in IDO ('organism population', I cardiac muscle tissue of myocardium + + + + - - - - - - + MA @@ -365852,27 +363414,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of trabecula carnea cardiac muscle tissue that is part of a right ventricle [Automatically generated definition]. FMA:84429 uberon UBERON:0004525 cardiac muscle tissue of trabecula carnea of right ventricle + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -365901,27 +363457,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of trabecula carnea cardiac muscle tissue that is part of a left ventricle [Automatically generated definition]. FMA:84430 uberon UBERON:0004526 cardiac muscle tissue of trabecula carnea of left ventricle + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -366618,12 +364168,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -366657,6 +364202,10 @@ Classes for population already exist in IDO ('organism population', I liver lobule + + + + @@ -366666,12 +364215,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA MA @@ -366860,12 +364404,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -366897,15 +364436,14 @@ Classes for population already exist in IDO ('organism population', I interventricular septum membranous part + + + + - - - - - - + Wikipedia @@ -367112,18 +364650,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane. BAMS:RA EMAPA:35721 @@ -367152,27 +364680,25 @@ Classes for population already exist in IDO ('organism population', I raphe nuclei http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png + + + + + + + + - - - - - - + GO Wikipedia - - - - - - + Wikipedia @@ -367678,22 +365204,14 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -367724,12 +365242,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -367752,6 +365265,14 @@ Classes for population already exist in IDO ('organism population', I paired limb/fin + + + + + + + + @@ -367761,23 +365282,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VSAO - - - - - - + definitional @@ -367859,12 +365370,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -367886,15 +365392,14 @@ Classes for population already exist in IDO ('organism population', I pelvic appendage + + + + - - - - - - + definitional @@ -367963,12 +365468,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -367992,23 +365492,16 @@ Classes for population already exist in IDO ('organism population', I pectoral appendage + + + + - - - - - - + definitional - - - - - lexical - @@ -368236,7 +365729,7 @@ Classes for population already exist in IDO ('organism population', I A transverse unitary subdivision of the neural tube that shares a common dorsoventral structure (floor, basal, alar, and roof plates), but each having differential molecular identities and fates; they comprise the secondary prosencephalon, diencephalon (prosomeres), the midbrain (mesomeres), and the hindbrain (rhombomeres). We take the definition of neuromere from Puelles et al, although the existence of mesomeres and prosomeres may not be widely accepted A metameric segment of the central nervous system.[ZFA] - + 2009-06-18T09:00:04Z NLX:147842 TAO:0001328 @@ -368539,12 +366032,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO] EMAPA:37744 @@ -368558,6 +366046,10 @@ Classes for population already exist in IDO ('organism population', I Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from skeletal tissue + + + + @@ -368567,12 +366059,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + 2012-08-14 VSAO:0000015 VSAO @@ -368751,12 +366238,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The primitive cartilagionous skeletal structure of the fetal skull that grows to envelop the rapidly growing embyonic brain. In humans, the chondrocranium begins forming at 28 days from mesenchymal condensations and is fully formed between week 7 and 9 of fetal development. While the majority of the chondrocranium is succeeded by the bony skull in most higher vertebrates, some components do persist into adulthood.[1] In Cartilagious fishes and Agnathans, the chondrocranium persist throughout life.[2] Embryologically, the chondrocranium represent the basal cranial structure, and lay the base for the formation of the endocranium in higher vertebrates[WP]. in contrast to chondrocranium, this structure is entirely cartiliginous. In Chondricthyes this is the same as the neurocranium. FMA:76621 is an undefined fetal structure, so we assume the correct placement is here. Note that this is distinct from MA:0000317 which is the uberon:neurocranium (the part of the cranium that encloses the brain) AAO:0000094 @@ -368778,6 +366260,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004761 cartilaginous neurocranium + + + + @@ -368787,12 +366273,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + PMC1571569 @@ -368889,12 +366370,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -368910,15 +366386,14 @@ Classes for population already exist in IDO ('organism population', I skeletal element + + + + - - - - - - + VSAO @@ -369047,12 +366522,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -369091,15 +366561,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004770 articular system + + + + - - - - - - + FMA @@ -369214,12 +366683,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a respiratory system [Automatically generated definition]. EMAPA:37576 MA:0001821 @@ -369234,15 +366698,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004779 respiratory system lamina propria + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -369318,12 +366781,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a gastrointestinal system. MA:0001899 NCIT:C49299 @@ -369332,15 +366790,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004780 gastrointestinal system lamina propria + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -369375,12 +366832,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a gallbladder [Automatically generated definition]. EMAPA:35371 FMA:278594 @@ -369399,15 +366851,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004781 gallbladder lamina propria + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -370002,30 +367453,10 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - - - - - - - + + + + A mucosa that is part of a gastrointestinal system. BTO:0000546 BTO:0005568 @@ -370041,48 +367472,44 @@ Classes for population already exist in IDO ('organism population', I The gut mucosa of amphioxus has insulin-secreting cells. http://www.ncbi.nlm.nih.gov/pubmed/16417468 gastrointestinal system mucosa + + + + + + + + + + + + + + + + - - - - - - + PMID:16417468 - - - - - - + PMID:16417468 - - - - - - + PMID:16417468 - - - - - - + BTO-modified @@ -371426,12 +368853,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An endothelium of artery that is part of a respiratory system [Automatically generated definition]. EMAPA:37566 @@ -371452,15 +368874,14 @@ Classes for population already exist in IDO ('organism population', I respiratory system arterial endothelium + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -372342,12 +369763,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -372370,15 +369786,14 @@ Classes for population already exist in IDO ('organism population', I splanchnopleure http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png + + + + - - - - - - + EHDAA2 @@ -372406,12 +369821,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -372434,15 +369844,14 @@ Classes for population already exist in IDO ('organism population', I somatopleure http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png + + + + - - - - - - + EHDAA2 @@ -372990,18 +370399,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + EHDAA2:0000171 EMAPA:16561 EMAPA_RETIRED:16565 @@ -373012,6 +370411,14 @@ Classes for population already exist in IDO ('organism population', I biliary bud http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png + + + + + + + + @@ -373021,23 +370428,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2-modified @@ -374598,12 +371995,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A mucosa that is part of a pyloric antrum [Automatically generated definition]. BTO:0004107 FMA:17055 @@ -374636,15 +372028,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0004997 mucosa of pyloric antrum + + + + - - - - - - + BTO @@ -376288,26 +373679,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Missing definition for term UBERON:0005064. Please replace it using linked reference. uberon UBERON:0005064 left ventricular trabecular myocardium + + + + - - - - - - + GO @@ -376334,26 +373719,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Missing definition for term UBERON:0005066. Please replace it using linked reference. uberon UBERON:0005066 right ventricular trabecular myocardium + + + + - - - - - - + GO @@ -376732,8 +374111,8 @@ Classes for population already exist in IDO ('organism population', I The functional tissue of the central nervous system consisting of neurons and glial cells. - - + + CNS parenchyma central nervous system parenchyma parenchyma of CNS @@ -377332,12 +374711,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An external ectoderm that is part of a optic eminence [Automatically generated definition]. EMAPA:16539 RETIRED_EHDAA2:0001311 @@ -377346,15 +374720,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005216 optic eminence surface ectoderm + + + + - - - - - - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -377803,12 +375176,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells. Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)[TAO] EFO:0003492 @@ -377830,15 +375198,14 @@ Classes for population already exist in IDO ('organism population', I head mesenchyme + + + + - - - - - - + EHDAA2 @@ -377905,12 +375272,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -377926,15 +375288,14 @@ Classes for population already exist in IDO ('organism population', I trunk mesenchyme + + + + - - - - - - + EHDAA2 @@ -377956,12 +375317,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP]. The posterior of the two brain vesicles formed by specialization of the rhombencephalon in the developing embryo, it comprises the medulla oblongata. [TFD][VHOG] @@ -377986,15 +375342,14 @@ Classes for population already exist in IDO ('organism population', I myelencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg + + + + - - - - - - + definitional @@ -378972,12 +376327,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An apical ectodermal ridge that is part of a pectoral appendage bud. An ectodermal thickening at the end of the forelimb bud in the developing embryo. [TFD][VHOG] Apical ectodermal ridge that is part of the pectoral fin bud.[TAO] @@ -379004,15 +376354,14 @@ Classes for population already exist in IDO ('organism population', I pectoral appendage apical ectodermal ridge + + + + - - - - - - + EHDAA2 @@ -379130,12 +376479,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An apical ectodermal ridge that is part of a pelvic appendage bud. An ectodermal thickening at the end of the hindlimb bud in the developing embryo. [TFD][VHOG] Apical ectodermal ridge that is part of the pelvic fin bud.[TAO] @@ -379158,15 +376502,14 @@ Classes for population already exist in IDO ('organism population', I pelvic appendage apical ectodermal ridge + + + + - - - - - - + EHDAA2 @@ -379492,12 +376835,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea. TAO:0002188 ZFA:0001688 @@ -379505,6 +376843,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005427 corneal primordium + + + + @@ -379520,12 +376862,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -379625,12 +376962,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The dilated structure that is lined by endothelial cells and located at the arterial pole of the heart just above (distal to) the truncus arteriosus in mammalian embryos; it is the primordial vascular channel from which the aortic arches (and eventually the dorsal aortae) arise; the aortic sac is homologous to the ventral aorta of gill-bearing vertebrates. the merged ventral aortae of the embryo which supplies blood to the aortic arches[TMD][http://medical-dictionary.thefreedictionary.com/aortic+sac]. EHDAA2:0004145 @@ -379645,6 +376977,10 @@ Classes for population already exist in IDO ('organism population', I aortic sac + + + + @@ -379654,12 +376990,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -379987,12 +377318,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A longitudinal groove in the neural tube wall that divides the neural tube into dorsal (alar) and ventral (basal) halves (dorsal receives input from sensory neurons, ventral effects motor functions); stretches from the mesencephalon caudad[TMD]. sulcus limitans BAMS:slim @@ -380003,15 +377329,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005478 sulcus limitans of neural tube + + + + - - - - - - + EHDAA2 @@ -380279,12 +377604,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -380303,15 +377623,14 @@ Classes for population already exist in IDO ('organism population', I primitive heart tube + + + + - - - - - - + ZFA @@ -380393,12 +377712,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Cranial neural crest which gives rise to the trigeminal ganglion. todo - compare ZFA and EHDAA2 representation We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG] @@ -380415,6 +377729,10 @@ Classes for population already exist in IDO ('organism population', I trigeminal neural crest + + + + @@ -380430,12 +377748,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -380462,12 +377775,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -380496,6 +377804,10 @@ Classes for population already exist in IDO ('organism population', I gonad primordium + + + + @@ -380505,12 +377817,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -380568,28 +377875,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - + + Somite located in the head region, caudal to the otic vesicle. in humans this includes somites 1-4 They provide the epaxial and hypaxial muscles of the neck, the pharyngeal and laryngeal muscles that develop in the caudal branchial arches and the musculature of the tongue. Despite their localisation in the head, myogenic precursors from occipital somites essentially follow the trunk programmes (E. H. Walters and S. D., unpublished). during evolution, have been secondarily incorporated into the head (Gans and Northcutt, 1983) @@ -380603,26 +377897,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005594 head somite + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -380670,12 +377962,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -380695,6 +377982,10 @@ Classes for population already exist in IDO ('organism population', I lung primordium + + + + @@ -380704,12 +377995,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + XAO @@ -380782,18 +378068,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The portion of mesentery attached to the greater curvature of the stomach is named the dorsal mesentery (or dorsal mesogastrium, when referring to the portion at the stomach), and the part which suspends the colon is termed the mesocolon. The dorsal mesogastrium develops into the greater omentum. The dorsal sheet of the primitive mesentery that encloses the stomach. The greater omentum develops from the dorsal mesogastrium. [TFD][VHOG] EHDAA2:0000416 @@ -380809,6 +378085,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005602 dorsal mesogastrium + + + + + + + + @@ -380818,23 +378102,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -380872,18 +378146,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + EMAPA:16844 MA:0001636 VHOG:0000215 @@ -380893,26 +378157,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005604 extrahepatic part of hepatic duct + + + + + + + + - - - - - - + MA - - - - - - + MA @@ -382023,12 +379285,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0000474 EMAPA:31862 EMAPA:31863 @@ -382040,6 +379297,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005728 extraembryonic mesoderm + + + + @@ -382049,12 +379310,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -382192,12 +379448,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -382213,15 +379464,14 @@ Classes for population already exist in IDO ('organism population', I paired limb/fin field + + + + - - - - - - + ISBN:9780878932504 ZFA-inferred @@ -383013,12 +380263,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -383028,6 +380273,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005856 developing mesenchymal condensation + + + + @@ -383043,12 +380292,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO-modified-relation @@ -383070,12 +380314,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -383096,6 +380335,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005863 cartilaginous condensation + + + + @@ -383105,12 +380348,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO @@ -383161,12 +380399,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -383188,15 +380421,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005865 pre-muscle condensation + + + + - - - - - - + AEO @@ -383207,12 +380439,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -383232,6 +380459,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005866 pre-cartilage condensation + + + + @@ -383241,12 +380472,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO @@ -383502,7 +380728,7 @@ Classes for population already exist in IDO ('organism population', I Organ with organ cavity, which has as parts a serous membrane and a serous cavity . Examples: pleural sac, pericardial sac, tendon sheath, bursa.[FMA]. - + FMA:9689 SCTID:362890006 uberon @@ -383617,7 +380843,7 @@ Classes for population already exist in IDO ('organism population', I Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO] - + AAO:0000963 EMAPA:17214 EMAPA:18043 @@ -383678,12 +380904,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + trabecula trabecular cartilage EFO:0003677 @@ -383695,6 +380916,10 @@ Classes for population already exist in IDO ('organism population', I neurocranial trabecula + + + + @@ -383704,12 +380929,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -383811,12 +381031,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Anteriosuperior, smooth-walled portion of the cavity of the right ventricle, beginning at the supraventricular crest and terminating in the pulmonary trunk. infundibulum EMAPA:37926 @@ -383839,15 +381054,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0005953 outflow part of right ventricle + + + + - - - - - - + PMID:17276708 @@ -384329,12 +381543,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -384354,15 +381563,14 @@ Classes for population already exist in IDO ('organism population', I atrium myocardial trabecula + + + + - - - - - - + ZFA @@ -384414,12 +381622,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -384443,15 +381646,14 @@ Classes for population already exist in IDO ('organism population', I atrioventricular septum + + + + - - - - - - + PMID:15797462 Wikipedia @@ -384498,12 +381700,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The paired arteries that carry blood to the yolk sac from the dorsal aorta. EHDAA2:0002208 EMAPA:16207 @@ -384515,15 +381712,14 @@ Classes for population already exist in IDO ('organism population', I vitelline artery http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png + + + + - - - - - - + ventral branch @@ -384795,12 +381991,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -384831,15 +382022,14 @@ Classes for population already exist in IDO ('organism population', I cervical region of vertebral column + + + + - - - - - - + FMA @@ -384917,12 +382107,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -384956,15 +382141,14 @@ Classes for population already exist in IDO ('organism population', I thoracic region of vertebral column + + + + - - - - - - + FMA @@ -385145,12 +382329,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -385170,15 +382349,14 @@ Classes for population already exist in IDO ('organism population', I subdivision of vertebral column + + + + - - - - - - + FMA @@ -385222,12 +382400,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -385260,15 +382433,14 @@ Classes for population already exist in IDO ('organism population', I aortico-pulmonary spiral septum http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray470.png + + + + - - - - - - + PMID:6844926 Wikipedia @@ -385324,12 +382496,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -385373,15 +382540,14 @@ Classes for population already exist in IDO ('organism population', I buccopharyngeal membrane http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png + + + + - - - - - - + EHDAA2 @@ -385455,24 +382621,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -385489,37 +382640,34 @@ Classes for population already exist in IDO ('organism population', I ethmoid bone primordium + + + + + + + + + + + + - - - - - - + FMA - - - - - - + AAO - - - - - - + EHDAA2 @@ -385729,18 +382877,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -385759,26 +382897,24 @@ Classes for population already exist in IDO ('organism population', I future central tendon + + + + + + + + - - - - - - + EHDAA2 - - - - - - + mesenchyme cranial part Wikipedia @@ -385814,12 +382950,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -385843,15 +382974,14 @@ Classes for population already exist in IDO ('organism population', I future spinal cord + + + + - - - - - - + EHDAA2 @@ -385897,18 +383027,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -385926,26 +383046,24 @@ Classes for population already exist in IDO ('organism population', I gallbladder primordium + + + + + + + + - - - - - - + EMAPA - - - - - - + EHDAA2 @@ -386021,12 +383139,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -386041,6 +383154,10 @@ Classes for population already exist in IDO ('organism population', I notochordal plate + + + + @@ -386050,12 +383167,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -386093,12 +383205,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -386115,15 +383222,14 @@ Classes for population already exist in IDO ('organism population', I The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process + + + + - - - - - - + EHDAA2 @@ -386202,12 +383308,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -386240,6 +383341,10 @@ Classes for population already exist in IDO ('organism population', I pleuroperitoneal canal + + + + @@ -386249,12 +383354,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -386286,18 +383386,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -386328,26 +383418,24 @@ Classes for population already exist in IDO ('organism population', I The embryonic ventricle or primitive ventricle of the developing heart gives rise to the trabeculated parts of the left and right ventricles. In contrast, the smooth parts of the left and right ventricles originate from the embryological bulbus cordis. The primitive ventricle becomes divided by a septum, the septum inferius or ventricular septum, which grows upward from the lower part of the ventricle, its position being indicated on the surface of the heart by a furrow. Its dorsal part increases more rapidly than its ventral portion, and fuses with the dorsal part of the septum intermedium. For a time an interventricular foramen exists above its ventral portion, but this foramen is ultimately closed by the fusion of the aortic septum with the ventricular septum[WP] future cardiac ventricle + + + + + + + + - - - - - - + ZFA - - - - - - + EMAPA @@ -386397,18 +383485,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A dense syncitial-like mesenchymal thickening in the dorsal mesogastrium[ISBN]. the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing spleen[MP]. check difference between splenic and spleen in EMAPA; note that in EHDAA2 the class 'spleen' refers to the mesenchyme UBERON:0009750 @@ -386425,6 +383503,14 @@ Classes for population already exist in IDO ('organism population', I spleen primordium + + + + + + + + @@ -386434,23 +383520,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2-modified - - - - - - + XAO @@ -386509,12 +383585,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA:924 EMAPA:16663 RETIRED_EHDAA2:0002089 @@ -386526,15 +383597,14 @@ Classes for population already exist in IDO ('organism population', I See: https://github.com/obophenotype/mouse-anatomy-ontology/issues/13 and https://github.com/obophenotype/uberon/issues/693 -- consider merging into trigeminal ganglion, as this complicates the model future trigeminal ganglion + + + + - - - - - - + EHDAA2 @@ -387869,24 +384939,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + The three-lobed cloverleaf-shaped aponeurosis situated at the center of the diaphragm; the central tendon is fused with the fibrous pericardium that provides attachment for the muscle fibers. In mammals, the diaphragm muscle divides the thoracoabdominal cavity into thorax and abdomen. In most mammals, the diaphragm is a flat sheet with muscle fibers radiating outward from a central tendon, and the diaphragm's apposition to the cranial surface of the liver gives it a dome-shape. Muscle fiber contraction reduces the curvature of the dome, thereby expanding the thoracic cavity and aspirating air into the lungs.[well established][VHOG] EMAPA:17702 @@ -387904,26 +384964,24 @@ Classes for population already exist in IDO ('organism population', I central tendon of diaphragm + + + + + + + + - - - - - - + VHOG - - - - - - + definitional @@ -388404,12 +385462,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -388430,6 +385483,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0006815 areolar connective tissue + + + + @@ -388439,12 +385496,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -388884,12 +385936,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A head mesenchyme that develops_from a mesoderm. merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme AAO:0011051 @@ -388917,6 +385964,10 @@ Classes for population already exist in IDO ('organism population', I head mesenchyme from mesoderm + + + + @@ -388926,12 +385977,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 XAO @@ -389659,12 +386705,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The stroma of the ovary is a peculiar soft tissue, abundantly supplied with blood vessels, consisting for the most part of spindle-shaped cells with a small amount of ordinary connective tissue. These cells have been regarded by some anatomists as unstriped muscle cells, which, indeed, they most resemble; by others as connective-tissue cells. On the surface of the organ this tissue is much condensed, and forms a layer composed of short connective-tissue fibers, with fusiform cells between them. The stroma of the ovary may contain interstitial cells resembling those of the testis. CALOHA:TS-1246 @@ -389686,15 +386727,14 @@ Classes for population already exist in IDO ('organism population', I ovary stroma + + + + - - - - - - + FMA @@ -390116,12 +387156,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Cranial neural crest that migrates into the mandibular arch. TAO:0007064 XAO:0000024 @@ -390130,6 +387165,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007098 mandibular neural crest + + + + @@ -390139,12 +387178,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -390163,10 +387197,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -390177,12 +387208,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -390197,15 +387223,14 @@ Classes for population already exist in IDO ('organism population', I Gene notes: Bmp, Nkx, Gata primary circulatory organ + + + + - - - - - - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -390918,12 +387943,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + relationship to Meckel's cartilage to be added Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG] EHDAA2:0000031 @@ -390937,15 +387957,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007237 1st arch mandibular component + + + + - - - - - - + EHDAA2 @@ -390983,12 +388002,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + relationship to palatoquadrate to be added Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG] EHDAA2:0000038 @@ -390999,15 +388013,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007238 1st arch maxillary component + + + + - - - - - - + EHDAA2 @@ -391105,12 +388118,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A tunica adventitia that is part of a artery. EMAPA:36295 EV:0100030 @@ -391122,15 +388130,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007240 tunica adventitia of artery + + + + - - - - - - + FMA @@ -391576,12 +388583,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -391602,15 +388604,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007272 pectoral appendage skeleton + + + + - - - - - - + VSAO @@ -391645,12 +388646,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -391668,15 +388664,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007273 pelvic appendage skeleton + + + + - - - - - - + VSAO @@ -391709,18 +388704,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -391747,26 +388732,24 @@ Classes for population already exist in IDO ('organism population', I presumptive hindbrain + + + + + + + + - - - - - - + XAO-abduced - - - - - - + cjm @@ -391823,12 +388806,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -391842,15 +388820,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007278 presumptive sinus venosus + + + + - - - - - - + ZFA @@ -391936,12 +388913,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -391960,15 +388932,14 @@ Classes for population already exist in IDO ('organism population', I presumptive midbrain hindbrain boundary + + + + - - - - - - + ZFA @@ -392007,12 +388978,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -392029,15 +388995,14 @@ Classes for population already exist in IDO ('organism population', I presumptive segmental plate + + + + - - - - - - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -392136,21 +389101,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - + @@ -392176,24 +389127,23 @@ Classes for population already exist in IDO ('organism population', I presumptive paraxial mesoderm + + + + + + + + + + + + + - - - - - - - - - - - - - - - + https://github.com/obophenotype/uberon/issues/1277 @@ -392535,12 +389485,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -392586,6 +389531,10 @@ Classes for population already exist in IDO ('organism population', I pancreatic duct http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png + + + + @@ -392595,12 +389544,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -392735,12 +389679,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -392767,15 +389706,14 @@ Classes for population already exist in IDO ('organism population', I outer epithelium + + + + - - - - - - + Wikipedia:Epidermis_(zoology) @@ -393377,12 +390315,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -393390,6 +390323,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007524 dense mesenchyme tissue + + + + @@ -393399,12 +390336,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO @@ -393543,12 +390475,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -393568,15 +390495,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007616 layer of synovial tissue + + + + - - - - - - + BTO @@ -393777,12 +390703,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -393808,6 +390729,10 @@ Classes for population already exist in IDO ('organism population', I trigeminal nuclear complex http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png + + + + @@ -393817,12 +390742,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -393992,12 +390912,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EFO:0003626 EHDAA2:0001457 EHDAA:962 @@ -394016,15 +390931,14 @@ Classes for population already exist in IDO ('organism population', I early pharyngeal endoderm http://dev.biologists.org/content/128/22/4573.full + + + + - - - - - - + cjm @@ -394268,12 +391182,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -394292,15 +391201,14 @@ Classes for population already exist in IDO ('organism population', I vascular system + + + + - - - - - - + MA @@ -394347,9 +391255,9 @@ Classes for population already exist in IDO ('organism population', I Adipose tissue that is located in the abdominal region. This includes any subcutaneous fat, visceral fat or encapsulated adipose tissue depots. - - - + + + CALOHA:TS-0002 EFO:0003771 uberon @@ -394505,12 +391413,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -394562,15 +391465,14 @@ Classes for population already exist in IDO ('organism population', I post-anal tail + + + + - - - - - - + possible exception in hemichordates cjm @@ -394735,12 +391637,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesentery that is located in the peritoneum. FMA:20570 TAO:0005129 @@ -394750,15 +391647,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007826 peritoneal mesentery + + + + - - - - - - + FMA @@ -395125,12 +392021,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -395173,15 +392064,14 @@ Classes for population already exist in IDO ('organism population', I pelvic girdle skeleton http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png + + + + - - - - - - + PMID:21455939 @@ -395346,18 +392236,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -395383,6 +392263,14 @@ Classes for population already exist in IDO ('organism population', I cartilage element + + + + + + + + @@ -395392,23 +392280,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VSAO - - - - - - + VSAO @@ -395618,20 +392496,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A bone that is part of a craniocervical region. EMAPA:37245 MA:0000569 @@ -395641,6 +392511,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0007914 bone of craniocervical region + + + + @@ -395650,12 +392524,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -396022,20 +392891,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Musculature system of the pharyngeal and head regions. in MA this is restricted to skeletal muscles EMAPA:37259 @@ -396049,6 +392910,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008229 craniocervical region musculature + + + + @@ -396058,12 +392923,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -396110,18 +392970,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Subdivision of thorax, which in humans is the posterior part of the thorax and is demarcated from the chest by the external surface of the posterolateral part of the rib cage and the anterior surface of the thoracic vertebral column; together with the chest, it constitutes the thorax. EMAPA:37234 FMA:24217 @@ -396137,27 +392987,25 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008231 dorsal thoracic segment of trunk + + + + + + + + - - - - - - + FMA MA - - - - - - + FMA @@ -396218,21 +393066,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A muscle of back that is part of a dorsal thoracic segment of trunk. EMAPA:37261 MA:0000508 @@ -396241,6 +393081,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008243 upper back muscle + + + + @@ -396250,12 +393094,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MA @@ -396398,12 +393237,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of a duodenum. CALOHA:TS-2087 @@ -396417,15 +393251,14 @@ Classes for population already exist in IDO ('organism population', I duodenal epithelium + + + + - - - - - - + FMA @@ -396526,10 +393359,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -396541,12 +393371,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An embryonic structure that is derived from the inner cell mass and lies above the hypoblast and gives rise to the three primary germ layers. EHDAA2:0000444 EHDAA:42 @@ -396562,15 +393387,14 @@ Classes for population already exist in IDO ('organism population', I The epiblast cells (appearing on day 8 of human embryonic development) make up a columnar epithelium with dense microvilli on the apical surface. During gastrulation, the epiblast cells undergo epithelial-to-mesenchymal transition and delaminate to become the loose mesenchyme of the primitive streak. The epiblast is present in postimplantation mouse embryos between E5.5-E7.5. inner cell mass derived epiblast + + + + - - - - - - + Wikipedia @@ -396722,12 +393546,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -396742,6 +393561,10 @@ Classes for population already exist in IDO ('organism population', I neural tube derived brain https://github.com/obophenotype/uberon/issues/338 + + + + @@ -396751,12 +393574,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -396777,18 +393595,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + An out-pocket of thickened ventral foregut epithelium adjacent to the developing heart. Constitutes the first morphological sign of the embryonic liver. The anterior portion of the hepatic diverticulum gives rise to the liver and intrahepatic biliary tree, while the posterior portion forms the gall bladder and extrahepatic bile ducts. in mice, the hepatic diverticulum forms by E9 and expands into an obvious liver bud by E10 The caudal part of the septum transversum is invaded by the hepatic diverticulum which divides within it to form the liver and thus gives rise to the ventral mesentery of the foregut. @@ -396807,6 +393615,14 @@ Classes for population already exist in IDO ('organism population', I hepatic diverticulum http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png + + + + + + + + @@ -396816,24 +393632,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + caudal part EHDAA2 - - - - - - + EHDAA2 @@ -396872,17 +393678,16 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + BTO:0001642 uberon UBERON:0008836 liver bud + + + + @@ -396892,12 +393697,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + http://www.stembook.org/node/512 @@ -396978,12 +393778,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -397010,15 +393805,14 @@ Classes for population already exist in IDO ('organism population', I stomach muscularis externa + + + + - - - - - - + MA-abduced @@ -397064,12 +393858,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -397101,6 +393890,10 @@ Classes for population already exist in IDO ('organism population', I pyloric canal https://upload.wikimedia.org/wikipedia/commons/3/33/Illu_stomach.jpg + + + + @@ -397110,12 +393903,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia @@ -397169,12 +393957,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -397199,6 +393982,10 @@ Classes for population already exist in IDO ('organism population', I pyloric gastric gland http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray1054.png + + + + @@ -397208,12 +393995,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia:Tubular_gland @@ -397273,12 +394055,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -397311,15 +394088,14 @@ Classes for population already exist in IDO ('organism population', I hypodermis skeletal muscle layer + + + + - - - - - - + MP-def @@ -397420,18 +394196,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Subdivision of endoskeleton derived from pharyngeal arches. @@ -397464,26 +394230,24 @@ Classes for population already exist in IDO ('organism population', I splanchnocranium http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg + + + + + + + + - - - - - - + https://github.com/obophenotype/uberon/issues/83 - - - - - - + redundant Grays PMID:11237469 @@ -397601,21 +394365,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Skeletal element that forms superficially in the organism, usually in association with the ectoderm[VSAO]. Intramembranous bone that forms superficially in the organism.[TAO] other AOs are not yet in sync with this classification @@ -397630,6 +394386,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008907 dermal bone + + + + @@ -397645,12 +394405,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VSAO @@ -397762,21 +394517,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + A parenchyma that is part of a lung. EMAPA:35522 FMA:27360 @@ -397789,6 +394536,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0008946 lung parenchyma + + + + @@ -397798,12 +394549,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -398267,21 +395013,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Cranial ganglion which develops from an epibranchial placode. BTO:0006250 TAO:0001555 @@ -398292,6 +395030,10 @@ Classes for population already exist in IDO ('organism population', I Epibranchial ganglia orchestrate the development of the cranial neurogenic crest epibranchial ganglion + + + + @@ -398301,12 +395043,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + NCBIBook:NBK53175 @@ -398358,18 +395095,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Endocardium that is part of the right atrium. EHDAA2:0000274 FMA:7281 @@ -398383,26 +395110,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009129 right atrium endocardium + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -398567,12 +395292,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -398589,15 +395309,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009142 entire embryonic mesenchyme + + + + - - - - - - + EHDAA2 @@ -398613,12 +395332,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EMAPA:16549 RETIRED_EHDAA2:0001454 pharyngeal region @@ -398626,15 +395340,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009145 pharyngeal region of foregut + + + + - - - - - - + EHDAA2 @@ -398665,18 +395378,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -398690,6 +395393,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009191 sphenoid bone pre-cartilage condensation + + + + + + + + @@ -398705,23 +395416,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -398818,20 +395519,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Mesenchyme that is part of a medial nasal prominence. EHDAA2:0001077 EMAPA:16810 @@ -398840,15 +395533,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009204 medial nasal process mesenchyme + + + + - - - - - - + EHDAA2 @@ -399083,12 +395775,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A portion of mesenchymal tissue associated with an individual pharyngeal arch. this represents a part of the entire arch mesenchyme (UBERON:0010046), and is therefore a superclass of the individual arch mesenchyme classes. Alternate definition: primordial embryonic connective tissue associated with the branchial arches, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to facial and cranial nerve-associated structures. EMAPA:32755 @@ -399100,6 +395787,10 @@ Classes for population already exist in IDO ('organism population', I pharyngeal arch mesenchymal region + + + + @@ -399109,12 +395800,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -399161,24 +395847,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + An epithelium that is part of a foregut-midgut junction. EHDAA2:0000573 EMAPA:16564 @@ -399187,26 +395863,24 @@ Classes for population already exist in IDO ('organism population', I epithelium of foregut-midgut junction + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -399577,12 +396251,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A submucosa that is part of a intestine. FMA:15696 submucosa of intestine @@ -399590,15 +396259,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009566 intestinal submucosa + + + + - - - - - - + FMA @@ -399812,12 +396480,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A sulcus limitans of neural tube that is part of a future medulla oblongata. EHDAA2:0001100 EMAPA:17561 @@ -399825,15 +396488,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009576 medulla oblongata sulcus limitans + + + + - - - - - - + EHDAA2 @@ -400009,20 +396671,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Mesenchyme that is part of a 1st arch mandibular component. UBERON:0010043 EHDAA2:0000034 @@ -400035,15 +396689,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009584 1st arch mandibular mesenchyme + + + + - - - - - - + EMAPA @@ -400159,24 +396812,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - + - - - - - - + @@ -400190,31 +396828,29 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009611 midbrain neural plate + + + + + + + + + + + + + - - - - - - - - - - - + ZFA - - - - - - + ZFA @@ -400229,24 +396865,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - + - - - - - - + @@ -400260,31 +396881,29 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009614 hindbrain neural plate + + + + + + + + + + + + + - - - - - - - - - - - + ZFA - - - - - - + ZFA @@ -400300,18 +396919,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + TODO - developmental relationships for lines TAO:0007044 ZFA:0007044 @@ -400321,26 +396930,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009615 midbrain hindbrain boundary neural plate + + + + + + + + - - - - - - + ZFA - - - - - - + https://github.com/obophenotype/uberon/issues/438 Bgee:AN @@ -400374,24 +396981,14 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + - - - - - - + @@ -400416,26 +397013,24 @@ Classes for population already exist in IDO ('organism population', I presumptive midbrain + + + + + + + + - - - - - - + ZFA - - - - - - + ZFA @@ -400481,12 +397076,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles. A major contributor to neurocranium [PMID:16313393] EHDAA2:0000736 @@ -400503,15 +397093,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009617 head paraxial mesoderm + + + + - - - - - - + EHDAA2 @@ -400564,12 +397153,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -400577,15 +397161,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009618 trunk paraxial mesoderm + + + + - - - - - - + EHDAA2 @@ -400771,12 +397354,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004566 EMAPA:32911 MA:0003203 @@ -400787,15 +397365,14 @@ Classes for population already exist in IDO ('organism population', I gut mesentery https://github.com/obophenotype/uberon/issues/509 + + + + - - - - - - + EHDAA2 @@ -400883,18 +397460,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -400911,26 +397478,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009670 rectal lumen + + + + + + + + - - - - - - + cjm - - - - - - + EHDAA2 @@ -400954,24 +397519,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + EHDAA2:0001371 uberon @@ -400981,6 +397531,18 @@ Classes for population already exist in IDO ('organism population', I dorsal pancreas + + + + + + + + + + + + @@ -400990,34 +397552,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 - - - - - - + cjm @@ -401029,24 +397576,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + EHDAA2:0001393 uberon @@ -401056,6 +397588,18 @@ Classes for population already exist in IDO ('organism population', I ventral pancreas + + + + + + + + + + + + @@ -401065,34 +397609,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 - - - - - - + cjm @@ -401119,18 +397648,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Any endocardium that is part of the right ventricle of the heart. Endocardium of ventricle which is continuous tricuspid valve, pulmonary valve and with the tunica intima of the pulmonary trunk. EHDAA2:0002188 @@ -401147,26 +397666,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009712 endocardium of right ventricle + + + + + + + + - - - - - - + EHDAA2 - - - - - - + FMA @@ -401229,12 +397746,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any endocardium that is part of the left ventricle of the heart. Endocardium of ventricle which is continuous with mitral valve, aortic valve, atrioventricular septum and the tunica intima of the aorta. EHDAA2:0002182 @@ -401250,15 +397762,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009713 endocardium of left ventricle + + + + - - - - - - + FMA @@ -401344,12 +397855,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -401364,15 +397870,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009722 entire pharyngeal arch endoderm + + + + - - - - - - + EHDAA2 @@ -401529,12 +398034,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -401547,12 +398047,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A serous sac that has the pleura and the pleural cavity as parts. despite its name the class EHDAA2:0004737 is not a true cavity, it corresponds to what we call the sac EHDAA2:0004737 @@ -401563,26 +398058,24 @@ Classes for population already exist in IDO ('organism population', I pleural sac + + + + + + + + - - - - - - + FMA - - - - - - + FMA-abduced-lr @@ -401697,18 +398190,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + An epithelium that is part of a embryonic cloaca. cloacal epithelium EHDAA2:0004585 @@ -401716,26 +398199,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009846 embryonic cloacal epithelium + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -401924,12 +398405,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EFO:0003704 TAO:0005041 ZFA:0005041 @@ -401939,15 +398415,14 @@ Classes for population already exist in IDO ('organism population', I anterior lateral plate mesoderm + + + + - - - - - - + ZFA @@ -401966,24 +398441,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -402003,37 +398463,34 @@ Classes for population already exist in IDO ('organism population', I UBERON:0009889 secondary heart field + + + + + + + + + + + + - - - - - - + GO:0003129 - - - - - - + PMID:17276708 - - - - - - + PMID:17276708 @@ -402202,18 +398659,17 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0001315 EHDAA:1122 uberon UBERON:0009920 optic neural crest + + + + @@ -402223,12 +398679,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -402495,12 +398946,6 @@ Classes for population already exist in IDO ('organism population', I multicellular anatomical structure - - - - - CARO - @@ -402750,18 +399195,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The sum total of mesenchymal tissue in the pharyngeal arch region. Pharyngeal mesenchyme is undifferentiated, loose connective tissue derived mostly from mesoderm, and also contains ectodermally derived neural crest cells. EHDAA2:0001459 EMAPA:16550 @@ -402773,6 +399208,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010046 entire pharyngeal arch associated mesenchyme + + + + + + + + @@ -402782,23 +399225,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + cjm @@ -402980,24 +399413,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -403011,37 +399429,34 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010083 future dermis + + + + + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 - - - - - - + XAO @@ -403068,24 +399483,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - - - - - - - + + + @@ -403098,37 +399498,34 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010084 future diaphragm + + + + + + + + + + + + - - - - - - + EHDAA2 - - - - - - + PMID:23586979 - - - - - - + PMID:23586979 @@ -403414,12 +399811,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403437,15 +399829,14 @@ Classes for population already exist in IDO ('organism population', I post-anal tail tip + + + + - - - - - - + MA @@ -403554,12 +399945,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403576,6 +399962,10 @@ Classes for population already exist in IDO ('organism population', I pair of dorsal aortae + + + + @@ -403585,12 +399975,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -403613,12 +399998,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403630,15 +400010,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010191 aortic system + + + + - - - - - - + Wikipedia @@ -403821,12 +400200,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403844,15 +400218,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010227 future cardiac atrium + + + + - - - - - - + ZFA @@ -403887,12 +400260,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -403917,15 +400285,14 @@ Classes for population already exist in IDO ('organism population', I eyeball of camera-type eye + + + + - - - - - - + FMA @@ -404011,10 +400378,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -404024,18 +400388,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -404048,6 +400402,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010252 1st arch mandibular mesenchyme from neural crest + + + + + + + + @@ -404057,23 +400419,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -404092,10 +400444,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -404105,44 +400454,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a 1st arch maxillary mesenchyme. EHDAA2:0000044 uberon UBERON:0010253 1st arch maxillary mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -404161,10 +400498,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -404175,18 +400509,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a 4th arch mesenchyme. In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG] EHDAA2:0000098 @@ -404201,26 +400525,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010256 4th arch mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -404261,10 +400583,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -404275,18 +400594,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a 6th arch mesenchyme. EHDAA2:0004077 neural crest derived arch 6 mesenchyme @@ -404296,26 +400605,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010257 6th arch mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -404342,12 +400649,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -404360,15 +400662,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010258 mesenchyme from rhombencephalic neural crest + + + + - - - - - - + EHDAA2 @@ -404480,18 +400781,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. DHBA:12322 EFO:0003567 @@ -404505,6 +400796,14 @@ Classes for population already exist in IDO ('organism population', I midbrain basal plate + + + + + + + + @@ -404514,23 +400813,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + ZFA @@ -404559,12 +400848,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Portion of neural tube that gives rise to the midbrain. we follow ZFA in temporally dividing midbrain NT from presumptive midbrain, but in future this may be collapsed TAO:0007039 @@ -404573,15 +400857,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010286 midbrain neural tube + + + + - - - - - - + ZFA @@ -404598,26 +400881,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia:Sclera#Histology uberon UBERON:0010291 layer of sclera + + + + - - - - - - + cjm @@ -404889,12 +401166,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -404910,15 +401182,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010312 immature eye + + + + - - - - - - + definitional @@ -405172,26 +401443,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a limb/fin bud. uberon UBERON:0010329 paired limb/fin bud mesenchyme + + + + - - - - - - + EHDAA2-abduced @@ -405226,26 +401491,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that is part of a extraembryonic membrane. uberon UBERON:0010333 extraembryonic membrane mesenchyme + + + + - - - - - - + EHDAA2-abduced @@ -405264,10 +401523,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405277,44 +401533,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a maxillary process mesenchyme. EHDAA2:0004601 uberon UBERON:0010334 maxillary process mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -405333,10 +401577,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405346,44 +401587,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a maxillary process mesenchyme. EHDAA2:0004602 uberon UBERON:0010335 maxillary process mesenchyme from head mesenchyme + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -405402,10 +401631,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405415,44 +401641,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a neural crest and is part of a mandibular process mesenchyme. EHDAA2:0004603 uberon UBERON:0010336 mandibular process mesenchyme from neural crest + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -405471,10 +401685,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405484,44 +401695,32 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a mandibular process mesenchyme. EHDAA2:0004604 uberon UBERON:0010337 mandibular process mesenchyme from head mesenchyme + + + + + + + + - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -405540,10 +401739,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405553,27 +401749,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch maxillary mesenchyme. EHDAA2:0000043 uberon UBERON:0010338 1st arch maxillary mesenchyme from head mesenchyme + + + + - - - - - - + EHDAA2 @@ -405592,10 +401782,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405605,27 +401792,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mandibular mesenchyme. EHDAA2:0000036 uberon UBERON:0010339 1st arch mandibular mesenchyme from head mesenchyme + + + + - - - - - - + EHDAA2 @@ -405644,10 +401825,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405658,12 +401836,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mesenchyme. EMAPA:16130 mesenchyme derived from head mesoderm of mesenchyme of 1st arch @@ -405671,15 +401844,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010341 1st arch mesenchyme from head mesenchyme + + + + - - - - - - + EMAPA @@ -405704,10 +401876,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405718,12 +401887,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 4th arch mesenchyme. EHDAA2:0000097 EMAPA:16771 @@ -405735,15 +401899,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010345 4th arch mesenchyme from head mesenchyme + + + + - - - - - - + EHDAA2 @@ -405768,10 +401931,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -405782,12 +401942,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 6th arch mesenchyme. EHDAA2:0004078 head mesenchyme derived arch 6 mesenchyme @@ -405797,15 +401952,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010347 6th arch mesenchyme from head mesenchyme + + + + - - - - - - + EHDAA2 @@ -406172,12 +402326,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406192,15 +402341,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010375 pancreas dorsal primordium + + + + - - - - - - + EHDAA2 @@ -406229,12 +402377,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406249,15 +402392,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010376 pancreas ventral primordium + + + + - - - - - - + EHDAA2 @@ -406291,12 +402433,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406310,6 +402447,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010377 mesenchyme from somatopleure + + + + @@ -406319,12 +402460,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -406357,12 +402493,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406375,6 +402506,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010378 mesenchyme from splanchnopleure + + + + @@ -406384,12 +402519,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -406423,12 +402553,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -406449,15 +402574,14 @@ Classes for population already exist in IDO ('organism population', I spleen trabecular artery + + + + - - - - - - + MP @@ -406870,12 +402994,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Skeletal element that forms as a replacement or substitution of another element or tissue. VSAO:0000135 XAO:0004016 @@ -406884,6 +403003,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010522 replacement element + + + + @@ -406893,12 +403016,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -406917,12 +403035,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses. MESH:D055806 TAO:0005251 @@ -406932,15 +403045,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010523 microcirculatory vessel + + + + - - - - - - + ZFA @@ -407063,7 +403175,7 @@ Classes for population already exist in IDO ('organism population', I Anatomical group that consists of the soft and skeletal tissues of the appendicular region of the body and the appendage proper.[VSAO] It is still called a complex when one of the two parts is missing (?) There are fossil fishes with only an outgrowth (no record of a girdle), including thelodonts (which have a suprabranchial fin) as well as some anaspids which have a distinctive 'paired fin' (with differing published assertions on whether it's homologous to a pec fin or pelvic fin or both or neither). There are many fishes and other vertebrates with only a girdle and no outgrowth.[VSAO] note that the FMA uses the term 'limb' to refer to the entire appendage complex (free limb plus girdle region) - + 2012-04-23T10:46:51Z EMAPA:37858 FMA:7182 @@ -407476,12 +403588,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -407504,15 +403611,14 @@ Classes for population already exist in IDO ('organism population', I bone of appendage girdle complex + + + + - - - - - - + UBERONREF:0000003 @@ -407687,12 +403793,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Muscles of the pelvic girdle, hindlimb or pelvic fin. Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO] AAO:0000218 @@ -407710,15 +403811,14 @@ Classes for population already exist in IDO ('organism population', I pelvic complex muscle + + + + - - - - - - + prolog @@ -407786,12 +403886,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle of a pectoral girdle, pectoral fin or anterior limb. the MA class belongs here, based on its current child classes Muscles of the pectoral girdle, arm, forearm, and hand (brachium, antebrachium, manus respectively).[AAO] @@ -407808,15 +403903,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010891 pectoral complex muscle + + + + - - - - - - + prolog @@ -407868,18 +403962,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -407892,6 +403976,14 @@ Classes for population already exist in IDO ('organism population', I subdivision of skeleton + + + + + + + + @@ -407901,23 +403993,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + UBERONREF:0000003 - - - - - - + VSAO @@ -407957,12 +404039,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Skeletal element that forms around the notochord and is part of the vertebral column. we include a distinct subclass for bony vertebra In contrast to lampreys and jawed vertebrates, hagfishes were thought to lack vertebrae. Now, long overlooked vertebral rudiments have been analysed in hagfish, suggesting that vertebrae existed in the last common ancestor of all vertebrates.[well established][VHOG] @@ -407979,6 +404056,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010913 vertebral element + + + + @@ -407989,12 +404070,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -408058,12 +404134,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of either the head or the neck. NCIT:C32716 UMLS:C0448281 @@ -408073,15 +404144,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0010959 craniocervical muscle + + + + - - - - - - + prolog @@ -408106,20 +404176,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -408138,6 +404200,10 @@ Classes for population already exist in IDO ('organism population', I pharyngeal arch cartilage + + + + @@ -408147,12 +404213,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -408196,12 +404257,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -408210,8 +404266,8 @@ Classes for population already exist in IDO ('organism population', I The dorsal portion of the first pharyngeal arch, comprising the upper jaw[ZFIN,VHOG]. Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG] - - + + EFO:0003659 TAO:0001272 VHOG:0000511 @@ -408229,6 +404285,10 @@ Classes for population already exist in IDO ('organism population', I palatoquadrate arch + + + + @@ -408238,12 +404298,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + VHOG @@ -408797,14 +404852,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. - + axial skeletal system FMA:302077 post-cranial axial skeletal system @@ -408813,6 +404863,10 @@ Classes for population already exist in IDO ('organism population', I postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton + + + + @@ -408822,12 +404876,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + cjm @@ -408867,12 +404916,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Gland of the lamina epithelialis mucosae which perforate the lamina muscularis, with their adenomeres located in the submucosal connective tissue. BTO:0003751 EMAPA:37970 @@ -408881,15 +404925,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011148 submucosal gland + + + + - - - - - - + perforates @@ -408913,12 +404956,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Subdivision of skull that consists of the facial bones. EHDAA2:0002206 EHDAA:8361 @@ -408937,6 +404975,10 @@ Classes for population already exist in IDO ('organism population', I facial skeleton http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg + + + + @@ -408946,12 +404988,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -409236,12 +405273,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a large intestine. FMA:15654 @@ -409255,15 +405287,14 @@ Classes for population already exist in IDO ('organism population', I lamina propria of large intestine + + + + - - - - - - + FMA @@ -409308,12 +405339,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle layer that is part of a large intestine. FMA:14971 NCIT:C32927 @@ -409326,15 +405352,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011198 muscle layer of large intestine + + + + - - - - - - + FMA @@ -409392,12 +405417,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle layer that is part of a small intestine. FMA:14932 NCIT:C33569 @@ -409413,15 +405433,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011201 muscle layer of small intestine + + + + - - - - - - + FMA @@ -409579,12 +405598,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Muscles within the eye (bulbus oculi).[AAO] AAO:0010038 EMAPA:18808 @@ -409595,15 +405609,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011222 intra-ocular muscle + + + + - - - - - - + EMAPA @@ -409793,12 +405806,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The part of the trunk that is in the dorsum[cjm]. In humans, the subdivision of trunk which is demarcated from the trunk proper by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines, the external surface of the posterior abdominal wall; together with the trunk proper, it constitutes the trunk[FMA] EMAPA:35162 @@ -409813,6 +405821,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011270 dorsal trunk + + + + @@ -409822,12 +405834,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -409863,18 +405870,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + compare with 'stratum basale of epidermis'. This class is the source for many adult structures - see WP2062. See also: 'enveloping layer of ectoderm' EHDAA2:0001845 uberon @@ -409883,6 +405880,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011272 embryonic skin basal layer + + + + + + + + @@ -409892,23 +405897,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 - - - - - - + EHDAA2 @@ -410034,12 +406029,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -410063,15 +406053,14 @@ Classes for population already exist in IDO ('organism population', I lumen of esophagus + + + + - - - - - - + FMA @@ -410135,12 +406124,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -410158,15 +406142,14 @@ Classes for population already exist in IDO ('organism population', I paired limb/fin skeleton + + + + - - - - - - + ISBN:9780878932504 @@ -410229,24 +406212,22 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + EHDAA2:0002120 upper jaw future lip uberon UBERON:0011592 future upper lip + + + + + + + + @@ -410256,23 +406237,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + fusion - - - - - - + fusion @@ -410300,12 +406271,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -410326,15 +406292,14 @@ Classes for population already exist in IDO ('organism population', I jaw region http://eol.org/collections/11578 + + + + - - - - - - + EMAPA FMA-abduced ZFA-abduced @@ -410354,18 +406319,17 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0001020 lower jaw future lip uberon UBERON:0011596 future lower lip + + + + @@ -410375,12 +406339,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Wikipedia:Mandibular_prominence @@ -410457,18 +406416,17 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that develops_from a ectoderm and is part of a oral epithelium. EHDAA2:0004137 uberon UBERON:0011642 oral epithelium from ectoderm + + + + @@ -410478,12 +406436,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -411477,12 +407430,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle layer that is part of a wall of esophagus. In the upper esophagus, part of the externa is skeletal muscle, rather than smooth muscle FMA:62998 @@ -411496,15 +407444,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011878 muscle layer of esophagus + + + + - - - - - - + upper part Wikipedia:Muscular_layer @@ -411567,12 +407514,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -411614,6 +407556,10 @@ Classes for population already exist in IDO ('organism population', I anterior uvea + + + + @@ -411623,20 +407569,9 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + MP - - - - - lexical - @@ -411675,12 +407610,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -411705,6 +407635,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0011899 epimysium + + + + @@ -411714,12 +407648,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -411772,12 +407701,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Masses of developing blood cells attached to endothelium in the yolk sac. EHDAA2:0000177 EMAPA:16115 @@ -411788,15 +407712,14 @@ Classes for population already exist in IDO ('organism population', I yolk sac blood island + + + + - - - - - - + EHDAA2 @@ -412275,8 +408198,8 @@ Classes for population already exist in IDO ('organism population', I Anatomical system that consists of the integumental system plus all mucosae and submucosae. - - + + uberon dermatological system UBERON:0012125 @@ -412657,12 +408580,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The deep cervical artery (Profunda cervicalis) is an artery of the neck. FMA:10659 @@ -412674,15 +408592,14 @@ Classes for population already exist in IDO ('organism population', I deep cervical artery + + + + - - - - - - + FMA @@ -412826,26 +408743,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004588 uberon UBERON:0012361 internal anal region + + + + - - - - - - + EHDAA2 @@ -412866,12 +408777,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A muscle layer that is part of an intestine. FMA:15697 intestinal muscularis propria @@ -412881,15 +408787,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0012367 muscle layer of intestine + + + + - - - - - - + FMA @@ -413179,12 +409084,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -413206,6 +409106,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0012429 hematopoietic tissue + + + + @@ -413215,12 +409119,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + defitional @@ -413366,12 +409265,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -413388,15 +409282,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0012463 cloacal lumen + + + + - - - - - - + cjm @@ -413586,26 +409479,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004589 uberon UBERON:0012469 external anal region + + + + - - - - - - + EHDAA2 @@ -413632,12 +409519,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -413657,15 +409539,14 @@ Classes for population already exist in IDO ('organism population', I skeleton of pectoral complex + + + + - - - - - - + FMA @@ -413734,12 +409615,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -413759,15 +409635,14 @@ Classes for population already exist in IDO ('organism population', I skeleton of pelvic complex + + + + - - - - - - + FMA @@ -413819,18 +409694,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + The posterior region of the neck, including the suboccipital region. nuchal nape @@ -413853,6 +409718,14 @@ Classes for population already exist in IDO ('organism population', I dorsal part of neck + + + + + + + + @@ -413862,23 +409735,13 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + FMA @@ -414707,12 +410570,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A vein that drains a lip. SCTID:367664002 labial vein of face @@ -414723,15 +410581,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0013136 vein of lip + + + + - - - - - - + FMA @@ -414910,12 +410767,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -414939,15 +410791,14 @@ Classes for population already exist in IDO ('organism population', I cranial cavity http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg + + + + - - - - - - + Wikipedia @@ -415440,12 +411291,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -415462,15 +411308,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0013525 stomach lumen + + + + - - - - - - + FMA @@ -415521,12 +411366,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of a intestinal villus. FMA:63587 intestinal villus epithelium @@ -415536,15 +411376,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0013636 epithelium of intestinal villus + + + + - - - - - - + FMA @@ -416658,9 +412497,9 @@ Classes for population already exist in IDO ('organism population', I Subcutaneous adipose tissue that is located in the peritoneal cavity. Adipose tissue located inside the peritoneal cavity, packed in between internal organs and torso. An excess of visceral fat is known as central obesity, or belly fat, the pot belly or beer belly effect, in which the abdomen protrudes excessively[BTO:0004041]. - - - + + + BTO:0004041 CALOHA:TS-2405 uberon @@ -416742,9 +412581,9 @@ Classes for population already exist in IDO ('organism population', I Subcutaneous adipose tissue that is located in the abdominal region. - - - + + + CALOHA:TS-2406 abdominal subcutaneous adipose tissue subcutaneous abdominal fat @@ -417086,12 +412925,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + An epithelium that is part of a frontonasal prominence. EHDAA2:0004108 EMAPA:32918 @@ -417099,6 +412933,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0014702 frontonasal process epithelium + + + + @@ -417108,12 +412946,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2 @@ -417183,12 +413016,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -417203,15 +413031,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0014704 pleuroperitoneal canal lumen + + + + - - - - - - + EHDAA2 @@ -417413,18 +413240,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -417453,26 +413270,24 @@ Classes for population already exist in IDO ('organism population', I Classification notes: May be considered an external sphincter[PMID:8224664] crus of diaphragm + + + + + + + + - - - - - - + PMID:23586979 - - - - - - + PMID:23586979 @@ -417961,26 +413776,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a pectoral appendage (forelimb or pectoral fin). uberon UBERON:0014794 pectoral appendage muscle + + + + - - - - - - + prolog @@ -418007,26 +413816,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any muscle organ that is part of a pelvic appendage (hindlimb or pelvic fin). uberon UBERON:0014795 pelvic appendage muscle + + + + - - - - - - + prolog @@ -418187,12 +413990,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + One of the primary blood vessel sprouts that originate from the dorsal aorta and posterior cardinal vein and align dorsoventrally at the myotomal boundaries between somites. Blood vessels that connect the dorsal aorta or the posterior cardinal vein and the dorsal longitudinal anastomotic vessel. They run along the vertical myotomal boundaries. At early stages these don't have venous or arterial markers[ZFA:0001285, ZFIN:ZDB-PUB-030908-4]. EFO:0003664 @@ -418210,6 +414008,10 @@ Classes for population already exist in IDO ('organism population', I intersomitic vessel + + + + @@ -418219,12 +414021,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + ZFA @@ -418451,12 +414248,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + consider merging into myocardial compact layer FMA:83105 perimysial connective tissue of subepicardium @@ -418465,15 +414257,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0015128 subepicardial layer of epicardium + + + + - - - - - - + FMA @@ -418573,31 +414364,25 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands. the only orbital gland found in anuran amphibians is either the Harderian or the lacrimal; if it is a lacrimal, then a progressive lateral migration of the lacrimal glands must occur through the amniotes[PMID:7559104] the only orbital gland found in anuran amphibians is the Harderian[PMID:8843648] - + ocular gland uberon orbital gland UBERON:0015152 gland of ocular region + + + + - - - - - - + inferred @@ -419054,12 +414839,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A basement membrane of epithelium that is part of a respiratory system. EMAPA:37570 MA:0001815 @@ -419067,15 +414847,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0015329 respiratory system basement membrane + + + + - - - - - - + MA @@ -419137,12 +414916,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + The hepatic artery proper (also proper hepatic artery), arises from the common hepatic artery and runs alongside the portal vein and the common bile duct to form the portal triad. The hepatic artery proper gives off a small supraduodenal artery to the duodenal bulb. Then the right gastric artery comes off and runs to the left along the lesser curvature of the stomach to meet the left gastric artery, which is a branch of the celiac trunk. It subsequently gives off the cystic artery, which feeds the gallbladder, before bifurcating into the right and left hepatic arteries. Of note, the right and left hepatic arteries may demonstrate variant anatomy. A replaced right hepatic artery may arise from the superior mesenteric artery (SMA) and a replaced left hepatic artery may arise from the left gastric artery. EMAPA:37217 @@ -419157,6 +414931,10 @@ Classes for population already exist in IDO ('organism population', I proper hepatic artery + + + + @@ -419166,12 +414944,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -419208,21 +414981,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -419242,15 +415007,14 @@ Classes for population already exist in IDO ('organism population', I left hepatic artery + + + + - - - - - - + FMA @@ -419295,21 +415059,13 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + @@ -419329,15 +415085,14 @@ Classes for population already exist in IDO ('organism population', I right hepatic artery + + + + - - - - - - + FMA @@ -419701,12 +415456,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + A lamina propria that is part of a duodenum. EMAPA:27255 @@ -419720,15 +415470,14 @@ Classes for population already exist in IDO ('organism population', I duodenum lamina propria + + + + - - - - - - + FMA @@ -420707,12 +416456,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -420735,6 +416479,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0016887 entire extraembryonic component + + + + @@ -420744,12 +416492,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + AEO @@ -421257,12 +417000,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -421280,15 +417018,14 @@ Classes for population already exist in IDO ('organism population', I skeletal musculature + + + + - - - - - - + MA @@ -422659,12 +418396,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -422678,15 +418410,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0034710 spinal cord ventricular layer + + + + - - - - - - + EHDAA2 @@ -423932,12 +419663,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Any of several arteries that arise from the aorta and supply blood to the esophagus. FMA:4149 @@ -423951,6 +419677,10 @@ Classes for population already exist in IDO ('organism population', I esophageal artery + + + + @@ -423960,12 +419690,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -424443,12 +420168,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -424464,15 +420184,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0035763 cavity of cardiac chamber + + + + - - - - - - + FMA @@ -424843,18 +420562,8 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + @@ -424870,26 +420579,24 @@ Classes for population already exist in IDO ('organism population', I UBERON:0035831 costal diaphragm + + + + + + + + - - - - - - + PMID:23586979 - - - - - - + PMID:23586979 @@ -424997,26 +420704,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004070 uberon UBERON:0036072 respiratory primordium epithelium + + + + - - - - - - + EHDAA2 @@ -425044,27 +420745,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + EHDAA2:0004071 respiratory primordium associated mesenchyme uberon UBERON:0036073 respiratory primordium mesenchyme + + + + - - - - - - + EHDAA2 @@ -425530,20 +421225,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Wall of ventricle which is continuous with the wall of aorta. FMA:9556 left ventricular wall @@ -425551,6 +421238,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0036285 wall of left ventricle + + + + @@ -425560,12 +421251,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -425590,20 +421276,12 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + Wall of ventricle which is continuous with the wall of pulmonary trunk. FMA:9533 right ventricular wall @@ -425611,6 +421289,10 @@ Classes for population already exist in IDO ('organism population', I UBERON:0036286 wall of right ventricle + + + + @@ -425620,12 +421302,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -425658,12 +421335,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -425675,15 +421347,14 @@ Classes for population already exist in IDO ('organism population', I UBERON:0036288 anterior wall of left ventricle + + + + - - - - - - + FMA @@ -425918,36 +421589,27 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:14657 gallbladder wall uberon UBERON:0036343 wall of gallbladder + + + + - - - - - - + FMA @@ -425966,26 +421628,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:15089 brachiocephalic arterial wall uberon UBERON:0036351 wall of brachiocephalic artery + + + + @@ -425995,12 +421653,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426019,26 +421672,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:15090 subclavian arterial wall uberon UBERON:0036352 wall of subclavian artery + + + + @@ -426048,12 +421697,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426072,10 +421716,7 @@ Classes for population already exist in IDO ('organism population', I - - - - + @@ -426085,27 +421726,21 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA:15704 anal canal wall uberon UBERON:0036362 wall of anal canal + + + + - - - - - - + FMA @@ -426124,26 +421759,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:18211 pulmonary arterial wall uberon UBERON:0036422 wall of pulmonary artery + + + + @@ -426153,12 +421784,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426177,26 +421803,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:231590 uberon UBERON:0036553 wall of synovial tendon sheath + + + + @@ -426206,12 +421828,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426224,27 +421841,23 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:58098 eyeball wall uberon UBERON:0036925 wall of eyeball + + + + @@ -426254,12 +421867,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426278,28 +421886,24 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:63144 orbit wall uberon UBERON:0037089 wall of orbit + + + + @@ -426309,12 +421913,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426333,26 +421932,22 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - + FMA:66284 common carotid arterial wall uberon UBERON:0037094 wall of common carotid artery + + + + @@ -426362,12 +421957,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426386,33 +421976,15 @@ Classes for population already exist in IDO ('organism population', I - - - - + - - - - - - - - - - - - - - - - - - + + + Wall of organ which has as its parts the endocardium, myocardium , epicardium, and the cardiac septum, surrounded by the pericardial sac proper and is continuous with the walls of the systemic and pulmonary arterial and venous trees. FMA:7274 cardiac wall @@ -426420,6 +421992,18 @@ Classes for population already exist in IDO ('organism population', I UBERON:0037144 wall of heart + + + + + + + + + + + + @@ -426429,34 +422013,19 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA - - - - - - + FMA - - - - - - + FMA @@ -426490,12 +422059,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + @@ -426511,15 +422075,14 @@ Classes for population already exist in IDO ('organism population', I https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + + + + - - - - - - + FMA Wikipedia @@ -426560,26 +422123,20 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA:15395 uberon UBERON:0039228 sigmoid vein + + + + - - - - - - + FMA @@ -426641,18 +422198,17 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. FMA:14342 uberon UBERON:0039856 right ovarian vein + + + + @@ -426662,12 +422218,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + FMA @@ -426743,9 +422294,9 @@ Classes for population already exist in IDO ('organism population', I A zone of skin that is part of the face. - - - + + + 2012-02-05T05:23:01Z EMAPA:36657 FMA:24758 @@ -426849,7 +422400,7 @@ Classes for population already exist in IDO ('organism population', I An anatomical junction between two parts of the digestive tract. - + 2021-02-05T11:19:31Z uberon UBERON:1100000 @@ -427547,7 +423098,7 @@ Classes for population already exist in IDO ('organism population', I Left part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. - + uberon UBERON:8000006 left side of back @@ -427584,7 +423135,7 @@ Classes for population already exist in IDO ('organism population', I Right part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. - + uberon UBERON:8000007 right side of back @@ -427603,25 +423154,23 @@ Classes for population already exist in IDO ('organism population', I - - - - - - - - - - - - + + A collection of Purkinje fibers that receives signals from the right and left bundle branches and innervates the ventricular cardiac muscle. The Purkinje fiber network creates synchronized contractions of the heart ventricles. - + Purkinje fibre network uberon UBERON:8000009 Purkinje fiber network + + + + + + + + @@ -427633,12 +423182,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -427646,12 +423190,7 @@ Classes for population already exist in IDO ('organism population', I - - - - - - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -427694,7 +423233,7 @@ Classes for population already exist in IDO ('organism population', I Hepatic serous coat; peritoneal covering of the liver, enclosing almost all except for a triangular area on its posterior surface (the 'bare area of the liver') and a smaller area where the liver and gallbladder are in direct contact. - + serosa of liver tunica serosa hepatis uberon @@ -427747,7 +423286,7 @@ Classes for population already exist in IDO ('organism population', I Subserosal tissue of liver. A zone of areolar connective tissue lying beneath the serous coat of the liver and distinguished with difficulty from the fibrous capsule of Glisson. - + hepatic subserosa subserosal tissue of liver subserous layer of liver @@ -427802,7 +423341,7 @@ Classes for population already exist in IDO ('organism population', I Venule of villus of small intestine. - + venule of small intestine uberon UBERON:8410001 @@ -427840,7 +423379,7 @@ Classes for population already exist in IDO ('organism population', I Arteriole of villus of small intestine. - + arteriole of small intestine arteriole of villus of small intestine small intestine villus arteriole @@ -427880,7 +423419,7 @@ Classes for population already exist in IDO ('organism population', I A venule that is located in the anorectum. - + anorectum venule uberon UBERON:8410008 @@ -427917,7 +423456,7 @@ Classes for population already exist in IDO ('organism population', I An arteriole that is located in the anorectum. - + anorectum arteriole uberon UBERON:8410009 @@ -427954,7 +423493,7 @@ Classes for population already exist in IDO ('organism population', I An arteriole located in the colon. - + uberon UBERON:8410015 arteriole of colon @@ -427995,7 +423534,7 @@ Classes for population already exist in IDO ('organism population', I An anatomical junction between two parts of the intestine. - + junction of intestine uberon UBERON:8410024 @@ -428032,7 +423571,7 @@ Classes for population already exist in IDO ('organism population', I A venule located in the colon. - + uberon UBERON:8410048 venule of colon @@ -428099,7 +423638,7 @@ Classes for population already exist in IDO ('organism population', I The anatomy, pathology and medical community considers the anus to be part of the large intestine, and supports the use of 'anorectum' to include rectum, anal canal and anus. Although a few resources seem to only include the distal part of the rectum in 'anorectum', this UBERON grouping term is meant to refer more broadly to the whole of rectum. anorectal - + anorectal canal uberon UBERON:8410050 @@ -428140,7 +423679,7 @@ Classes for population already exist in IDO ('organism population', I A capillary that is part of the anorectum. - + blood vessel capillary of anorectum uberon UBERON:8410056 @@ -428177,7 +423716,7 @@ Classes for population already exist in IDO ('organism population', I A capillary that is part of the colon. - + blood vessel capillary of colon uberon UBERON:8410057 @@ -428214,8 +423753,8 @@ Classes for population already exist in IDO ('organism population', I A capillary that is part of a small intestine. - - 2021-12-21T15:14:31Z + + 2021-12-21T15:14:31Z blood vessel capillary of small intestine small intestine capillary uberon @@ -428256,8 +423795,8 @@ Classes for population already exist in IDO ('organism population', I A submucosal gland found in a respiratory tract. - - 2022-03-24T14:21:59Z + + 2022-03-24T14:21:59Z EFO:0010666 respiratory tract submucosal gland submucosal gland of respiratory tract @@ -428389,8 +423928,8 @@ Classes for population already exist in IDO ('organism population', I A capillary that is part of the brain. - - 2022-06-24T09:28:31Z + + 2022-06-24T09:28:31Z uberon UBERON:8480001 capillary of brain @@ -428426,8 +423965,8 @@ Classes for population already exist in IDO ('organism population', I A portion of smooth muscle tissue that is part of the thoracic aorta. - - 2022-06-24T09:30:54Z + + 2022-06-24T09:30:54Z uberon UBERON:8480002 thoracic aorta smooth muscle tissue @@ -428463,8 +424002,8 @@ Classes for population already exist in IDO ('organism population', I A zone of skin that is above the clavicle zone in the pectoral girdle region. - - 2022-08-29T14:17:12Z + + 2022-08-29T14:17:12Z uberon UBERON:8480025 skin of clavicle region @@ -428501,8 +424040,8 @@ Classes for population already exist in IDO ('organism population', I A zone of skin that is above the iliac crest in the pelvic girdle bone/zone. - - 2022-08-29T14:19:16Z + + 2022-08-29T14:19:16Z skin of posterior iliac crest region uberon UBERON:8480026 @@ -428540,8 +424079,8 @@ Classes for population already exist in IDO ('organism population', I A zone of skin that is part of the external genitalia. - - 2022-08-30T06:55:06Z + + 2022-08-30T06:55:06Z uberon UBERON:8480029 skin of external genitalia @@ -428578,8 +424117,8 @@ Classes for population already exist in IDO ('organism population', I A zone of skin part of some gonad. - - 2023-08-29T10:24:24Z + + 2023-08-29T10:24:24Z uberon UBERON:8480074 skin of gonad @@ -428604,8 +424143,8 @@ Classes for population already exist in IDO ('organism population', I A muscle tissue that is associated with soft internal organs (viscera). - - 2023-02-16T10:17:46Z + + 2023-02-16T10:17:46Z visceral muscle uberon UBERON:8600004 @@ -428642,8 +424181,8 @@ Classes for population already exist in IDO ('organism population', I A striated muscle tissue that is associated with soft internal organs (viscera). - - 2023-02-16T10:34:43Z + + 2023-02-16T10:34:43Z striated visceral muscle tissue uberon UBERON:8600006 @@ -428682,8 +424221,8 @@ Classes for population already exist in IDO ('organism population', I A spherical or tubular structure in a submucosal gland that produces and secretes mucus and other substances into the ducts leading to the surface epithelium. - - 2023-05-02T08:57:27Z + + 2023-05-02T08:57:27Z uberon UBERON:8600012 @@ -428720,9 +424259,9 @@ Classes for population already exist in IDO ('organism population', I A discrete anatomical unit of the lung that is composed of a segmental bronchus and the lung tissue supplied by that bronchus. A bronchopulmonary segment exhibits a pyramidal shape, with its apex pointing towards the center of the lung and its base toward the pleural surface. - - - 2023-07-20T12:43:29Z + + + 2023-07-20T12:43:29Z lung segment uberon UBERON:8600017 @@ -428791,8 +424330,8 @@ Classes for population already exist in IDO ('organism population', I A venule that is part of a lung and drains oxygenated blood from pulmonary capillaries. A pulmonary venule merges into a pulmonary vein branch that runs in the pulmonary interlobular septa. - - 2023-10-24T11:26:27Z + + 2023-10-24T11:26:27Z uberon UBERON:8600024 pulmonary venule @@ -435971,7 +431510,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim A Mus musculus individual that is a substrain of C57BL/6J (mother) and CAST/EiJ (father). - paola + paola PMID:27668657 https://orcid.org/0000-0002-3163-0115 @@ -435985,8 +431524,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim Inbred Strain. - Zoe May Pendlington - 2023-11-02T09:06:58Z + Zoe May Pendlington + 2023-11-02T09:06:58Z MGI:2159849 TGEMO:00019 DBA @@ -435999,8 +431538,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim Strain family. - Zoe May Pendlington - 2023-11-02T09:09:47Z + Zoe May Pendlington + 2023-11-02T09:09:47Z MGI:2159850 TGEMO:00108 C @@ -436275,7 +431814,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:15:07Z Islands east of the Horn of Africa and south of Yemen Ecoregion WWF:AT1318 @@ -436290,7 +431829,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:18:55Z WWF:AT1317 https://www.worldwildlife.org/ecoregions/at1317 @@ -436304,7 +431843,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:20:56Z WWF:AT1316 https://www.worldwildlife.org/ecoregions/at1316 @@ -436318,7 +431857,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:24:28Z Africa: Namibia Ecoregion WWF:AT1315 @@ -436333,7 +431872,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:26:15Z WWF:AT1314 https://www.worldwildlife.org/ecoregions/at1314 @@ -436347,7 +431886,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:28:43Z WWF:AT1313 https://www.worldwildlife.org/ecoregions/at1313 @@ -436361,7 +431900,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:30:23Z WWF:AT1312 https://www.worldwildlife.org/ecoregions/at1312 @@ -436375,7 +431914,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:31:29Z WWF:AT1311 https://www.worldwildlife.org/ecoregions/at1311 @@ -436390,7 +431929,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:39:32Z WWF:AT1310 https://www.worldwildlife.org/ecoregions/at1310 @@ -436405,7 +431944,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:42:47Z WWF:AT1309 https://www.worldwildlife.org/ecoregions/at1309 @@ -436419,7 +431958,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:44:54Z WWF:AT1308 https://www.worldwildlife.org/ecoregions/at1308 @@ -436434,7 +431973,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:46:58Z Eastern Africa: Somalia WWF:AT1307 @@ -436449,7 +431988,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-06T22:54:57Z WWF:AT1306 https://www.worldwildlife.org/ecoregions/at1306 @@ -436464,7 +432003,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:08:06Z WWF:AT1305 https://www.worldwildlife.org/ecoregions/at1305 @@ -436478,7 +432017,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:11:29Z WWF:AT1304 https://www.worldwildlife.org/ecoregions/at1304 @@ -436492,7 +432031,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:13:33Z WWF:AT1303 https://www.worldwildlife.org/ecoregions/at1303 @@ -436507,7 +432046,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:16:12Z WWF:AT1302 https://www.worldwildlife.org/ecoregions/at1302 @@ -436522,7 +432061,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-03-07T00:18:09Z WWF:AT1301 https://www.worldwildlife.org/ecoregions/at1301 @@ -436535,7 +432074,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-04-26T23:38:50Z Indo-Malay Ecoregion @@ -436549,7 +432088,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-04-26T23:40:13Z WWF:IM1304 @@ -436564,7 +432103,7 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - + 2019-04-27T00:12:51Z WWF:IM1303 @@ -436579,8 +432118,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim A polar front between the deep, cold Arctic air and the shallower, warmer polar air of northern latitudes on Earth. - - 2019-08-20T13:47:18Z + + 2019-08-20T13:47:18Z envoAtmo envoPolar Arctic front @@ -436599,8 +432138,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim A polar front between the deep, cold Antarctic air and the shallower, warmer polar air of southern latitudes on Earth. - - 2019-08-20T13:48:44Z + + 2019-08-20T13:48:44Z envoAtmo envoPolar Antarctic front @@ -436620,8 +432159,8 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim Stellar radiation emitted from Sol. - - 2020-05-19T22:27:44Z + + 2020-05-19T22:27:44Z Solar radiation @@ -440783,490 +436322,493 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim meter - - metre + A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second. m + m - A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second. - meter + metre "A length unit which is equal to the length of the path traveled by light in vacuum during a time interval of 1/299 792 458 of a second." [BIPM:BIPM, NIST:NIST] + meter - kilogram - kg + A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France. kg - kilogram + + kg "A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France." [BIPM:BIPM, NIST:NIST] - A mass unit which is equal to the mass of the International Prototype Kilogram kept by the BIPM at Svres, France. + kilogram + second + A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom. s + sec s - second - sec - A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom. "A time unit which is equal to the duration of 9 192 631 770 periods of the radiation corresponding to the transition between the two hyperfine levels of the ground state of the caesium 133 atom." [BIPM:BIPM, NIST:NIST] - second + second - cm - centimeter - cm centimeter - centimetre + A length unit which is equal to one hundredth of a meter or 10^[-2] m. + cm + centimetre + cm "A length unit which is equal to one hundredth of a meter or 10^[-2] m." [NIST:NIST] - A length unit which is equal to one hundredth of a meter or 10^[-2] m. + centimeter + millimeter A length unit which is equal to one thousandth of a meter or 10^[-3] m. mm - mm - millimeter - millimetre - millimeter + millimetre + mm "A length unit which is equal to one thousandth of a meter or 10^[-3] m." [NIST:NIST] + millimeter micrometer + A length unit which is equal to one millionth of a meter or 10^[-6] m. + um + + micrometre micron + um "A length unit which is equal to one millionth of a meter or 10^[-6] m." [NIST:NIST] - micrometre micrometer - A length unit which is equal to one millionth of a meter or 10^[-6] m. - um - - um - nm - nm nanometer A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m. - nanometre - nanometer + nm + nanometre + nm "A length unit which is equal to one thousandth of one millionth of a meter or 10^[-9] m." [NIST:NIST] + nanometer angstrom - angstrom - "A length unit which is equal to 10 [-10] m." [NIST:NIST] A length unit which is equal to 10 [-10] m. - Å + Å + "A length unit which is equal to 10 [-10] m." [NIST:NIST] + angstrom - gram A mass unit which is equal to one thousandth of a kilogram or 10^[-3] kg. - gram - g g + + g "A mass unit which is equal to one thousandth of a kilogram or 10^[-3] kg." [NIST:NIST] + gram - - milligram + milligram A mass unit which is equal to one thousandth of a gram or 10^[-3] g. mg - "A mass unit which is equal to one thousandth of a gram or 10^[-3] g." [UOC:GVG] - milligram + mg + "A mass unit which is equal to one thousandth of a gram or 10^[-3] g." [UOC:GVG] + milligram microgram - A mass unit which is equal to one millionth of a gram or 10^[-6] g. - ug ug + + ug "A mass unit which is equal to one millionth of a gram or 10^[-6] g." [UOC:GVG] microgram - A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g. nanogram - ng + A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g. + ng + ng "A mass unit which is equal to one thousandth of one millionth of a gram or 10^[-9] g." [UOC:GVG] nanogram - ng picogram - A mass unit which is equal to 10^[-12] g. + pg + + pg "A mass unit which is equal to 10^[-12] g." [UOC:GVG] picogram - pg - pg - degree Celsius - "A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K." [NIST:NIST] - degree C + degree Celsius A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K. + C + degree C C - C - degree Celsius + "A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K." [NIST:NIST] + degree Celsius minute - min - - min - minute A time unit which is equal to 60 seconds. + min + + min "A time unit which is equal to 60 seconds." [Wikipedia:Wikipedia] + minute hour - - hour + A time unit which is equal to 3600 seconds or 60 minutes. h - h hr - A time unit which is equal to 3600 seconds or 60 minutes. + + h "A time unit which is equal to 3600 seconds or 60 minutes." [Wikipedia:Wikipedia] + hour day + A time unit which is equal to 24 hours. "A time unit which is equal to 24 hours." [Wikipedia:Wikipedia] - A time unit which is equal to 24 hours. day - - week - "A time unit which is equal to 7 days." [Wikipedia:Wikipedia] week A time unit which is equal to 7 days. + + "A time unit which is equal to 7 days." [Wikipedia:Wikipedia] + week - - month - "A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which in science is taken to be equal to 30 days." [Wikipedia:Wikipedia] month A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which in science is taken to be equal to 30 days. + + "A time unit which is approximately equal to the length of time of one of cycle of the moon's phases which in science is taken to be equal to 30 days." [Wikipedia:Wikipedia] + month year A time unit which is equal to 12 months which is science is taken to be equal to 365.25 days. + "A time unit which is equal to 12 months which in science is taken to be equal to 365.25 days." [Wikipedia:Wikipedia] year - - "A substance unit equal to a millionth of a mol or 10^[-6] mol." [NIST:NIST] micromole - A substance unit equal to a millionth of a mol or 10^[-6] mol. + umol + umol + "A substance unit equal to a millionth of a mol or 10^[-6] mol." [NIST:NIST] micromole - umol + nanomole + A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol. nmol + nmol "A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol." [NIST:NIST] - - nanomole nanomole - A substance unit equal to one thousandth of one millionth of a mole or 10^[-9] mol. + picomole + A substance unit equal to 10^[-12] mol. pmol + pmol "A substance unit equal to 10^[-12] mol." [NIST:NIST] - A substance unit equal to 10^[-12] mol. - - picomole picomole - M - M - "A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L)." [UOC:GVG] - A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L). molar + A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L). + M + M + "A unit of concentration which expresses a concentration of 1 mole of solute per liter of solution (mol/L)." [UOC:GVG] molar + millimolar A unit of molarity which is equal to one thousandth of a molar or 10^[-3] M. - mM - millimolar mM - millimolar + mM "A unit of molarity which is equal to one thousandth of a molar or 10^[-3] M." [UOC:GVG] + millimolar - micromolar - uM + micromolar A unit of molarity which is equal to one millionth of a molar or 10^[-6] M. - uM + uM - micromolar + uM "A unit of molarity which is equal to one millionth of a molar or 10^[-6] M." [UOC:GVG] + micromolar - nM - nM nanomolar - "A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M." [UOC:GVG] A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M. - nanomolar + nM + nM + "A unit of molarity which is equal to one thousandth of one millionth of a molar or 10^[-9] M." [UOC:GVG] + nanomolar - pM picomolar + A unit of molarity which is equal to 10^[-12] M. + pM + pM "A unit of molarity which is equal to 10^[-12] M." [UOC:GVG] picomolar - A unit of molarity which is equal to 10^[-12] M. - cubic centimeter - A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml. - cubic centimetre - cubic centimeter - cm^3 + cc + cc + cm^3 + cubic centimetre "A volume unit which is equal to one millionth of a cubic meter or 10^[-9] m^[3], or to 1 ml." [NIST:NIST] - cc + cubic centimeter - "A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter." [NIST:NIST] - milliliter - + milliliter A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter. + ml + millilitre ml - milliliter - ml + "A volume unit which is equal to one thousandth of a liter or 10^[-3] L, or to 1 cubic centimeter." [NIST:NIST] + milliliter - litre - A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter. - liter - "A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter." [NIST:NIST] + A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter. L - l + L + l + litre + "A volume unit which is equal to one thousandth of a cubic meter or 10^[-3] m^[3], or to 1 decimeter." [NIST:NIST] liter - "A volume unit which is equal to one thousand of a cubic meter or 10^[-3] m^[3], or to 1 L." [NIST:NIST] - cubic decimeter + cubic decimeter A volume unit which is equal to one thousand of a cubic meter or 10^[-3] m^[3], or to 1 L. - cubic decimeter cubic decimetre dm^[3] + "A volume unit which is equal to one thousand of a cubic meter or 10^[-3] m^[3], or to 1 L." [NIST:NIST] + cubic decimeter microliter - microliter - ul A volume unit which is equal to one millionth of a liter or 10^[-6] L. + ul + microlitre ul - "A volume unit which is equal to one millionth of a liter or 10^[-6] L." [NIST:NIST] + microliter + nanoliter A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L. - nanoliter + nl - "A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L." [NIST:NIST] - nanoliter nanolitre nl - nl + "A volume unit which is equal to one thousandth of one millionth of a liter or 10^[-9] L." [NIST:NIST] + nanoliter - picoliter - picolitre - picoliter A volume unit which is equal to 10^[-12] L. pl - "A volume unit which is equal to 10^[-12] L." [NIST:NIST] + + picolitre pl + "A volume unit which is equal to 10^[-12] L." [NIST:NIST] + picoliter - s^1 hertz - Hz + A frequency unit which is equal to 1 complete cycle of a recurring phenomenon in 1 second. + Hz + s^1 "A frequency unit which is equal to 1 complete cycle of a recurring phenomenon in 1 second." [NIST:NIST] - A frequency unit which is equal to 1 complete cycle of a recurring phenomenon in 1 second. hertz mass percentage + A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture. + % w/w + percent weight pr weight - weight-weight percentage - mass percentage w/w - % w/w + weight-weight percentage "A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture." [Wikipedia:Wikipedia] - percent weight pr weight - A dimensionless concentration unit which denotes the mass of a substance in a mixture as a percentage of the mass of the entire mixture. + mass percentage - (w/v) - mass volume percentage - % w/v A dimensionless concentration unit which denotes the mass of the substance in a mixture as a percentage of the volume of the entire mixture. - mass volume percentage + % w/v percent vol per vol + + (w/v) weight-volume percentage "A dimensionless concentration unit which denotes the mass of the substance in a mixture as a percentage of the volume of the entire mixture." [UOC:GVG] + mass volume percentage - volume percentage + volume percentage + A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution. % v/v + percent vol per vol - "A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution." [UOC:GVG] - A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution. % (v/v) - percent vol per vol - volume percentage + "A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution." [UOC:GVG] + volume percentage - g per L - A mass unit density which is equal to mass of an object in grams divided by the volume in liters. gram per liter + A mass unit density which is equal to mass of an object in grams divided by the volume in liters. + g per L + g/L + + g/L gram per litre "A mass unit density which is equal to mass of an object in grams divided by the volume in liters." [UOC:GVG] gram per liter - - g/L - g/L - "A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters." [UOC:GVG] milligram per milliliter - milligram per millilitre - mg per ml A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters. - milligram per milliliter + mg per ml mg/ml mg/ml + milligram per millilitre + "A mass unit density which is equal to mass of an object in milligrams divided by the volume in milliliters." [UOC:GVG] + milligram per milliliter - A temperature unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius. degree Fahrenheit + A temperature unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius. + F "A temperature unit which is equal to 5/9ths of a kelvin. Negative 40 degrees Fahrenheit is equal to negative 40 degrees Celsius." [Wikipedia:Wikipedia] - degree Fahrenheit - pH - + pH A dimensionless concentration notation which denotes the acidity of a solution in terms of activity of hydrogen ions (H+). + "A dimensionless concentration notation which denotes the acidity of a solution in terms of activity of hydrogen ions (H+)." [Wikipedia:Wikipedia] - pH + pH - ml/l - ml/l - milliliter per liter + milliliter per liter A volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution. ml per L + ml/l + millilitre per litre + ml/l "A volume per unit volume unit which is equal to one millionth of a liter of solute in one liter of solution." [NIST:NIST] - - milliliter per liter + milliliter per liter - g/dl gram per deciliter - "A mass density unit which is equal to mass of an object in grams divided by the volume in deciliters." [UOC:GVG] - gram per decilitre A mass density unit which is equal to mass of an object in grams divided by the volume in deciliters. - gram per deciliter - g/dl + + g/dl + gram per decilitre + "A mass density unit which is equal to mass of an object in grams divided by the volume in deciliters." [UOC:GVG] + gram per deciliter - colony forming unit per volume - colony forming unit per volume - "A concentration unit which a measure of viable bacterial numbers in a given volume." [Wikipedia:Wikipedia] A concentration unit which a measure of viable bacterial numbers in a given volume. + + "A concentration unit which a measure of viable bacterial numbers in a given volume." [Wikipedia:Wikipedia] + colony forming unit per volume - - A volumetric flow rate unit which is equal to one microliter volume through a given surface in one minute. - microliters per minute - "A volumetric flow rate unit which is equal to one microliter volume through a given surface in one minute." [UOC:GVG] microliters per minute - uL/min + A volumetric flow rate unit which is equal to one microliter volume through a given surface in one minute. + microlitres per minute + uL/min + "A volumetric flow rate unit which is equal to one microliter volume through a given surface in one minute." [UOC:GVG] + microliters per minute - nM^-1 s^-1 count per nanomolar second - "A rate unit which is equal to one over one nanomolar second." [UOC:GVG] - A rate unit which is equal to one over one nanomolar second. + + nM^-1 s^-1 + "A rate unit which is equal to one over one nanomolar second." [UOC:GVG] count per nanomolar second - "A rate unit which is equal to one over one molar second." [UOC:GVG] - count per molar second - count per molar second A rate unit which is equal to one over one molar second. + M^-1 s^-1 + "A rate unit which is equal to one over one molar second." [UOC:GVG] + count per molar second - nM^-1 + count per nanomolar A rate unit which is equal to one over one nanomolar. + 1/nM + nM^-1 "A rate unit which is equal to one over one nanomolar." [UO:GVG] - - count per nanomolar count per nanomolar - count per molar - M^-1 - 1/M A rate unit which is equal to one over one molar. - count per molar + + 1/M + M^-1 "A rate unit which is equal to one over one molar." [UO:GVG] + count per molar - "A mass unit density which is equal to mass of an object in micrograms divided by the volume in liters." [UOC:GVG] + microgram per liter A mass unit density which is equal to mass of an object in micrograms divided by the volume in liters. - ug/L + ng/ml ug/L - microgram per litre - ng/ml - microgram per liter + microgram per litre + ug/L + "A mass unit density which is equal to mass of an object in micrograms divided by the volume in liters." [UOC:GVG] microgram per liter - milligram per kilogram per day "A dosage unit which is equal to 1 milligram per day of a toxic or pharmaceutical substance per kilogram body weight of the recipient subject." [UO:PC] + milligram per kilogram per day + + + @@ -441741,23 +437283,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + + + + + @@ -441768,23 +437304,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + PMID:16417468 + + + + @@ -441900,23 +437430,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -441927,23 +437451,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442134,23 +437652,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA-abduced-lr + + + + @@ -442161,23 +437673,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + definitional + + + + @@ -442188,23 +437694,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + https://github.com/obophenotype/uberon/wiki/The-neural-crest + + + + @@ -442260,23 +437760,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + only in species that have a stomach + + + + @@ -442317,23 +437811,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Wikipedia:Vitelline_vein + + + + @@ -442374,23 +437862,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442416,23 +437898,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Wikipedia:Vitelline_vein + + + + @@ -442443,24 +437919,18 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + may be present in other parts in other species FMA + + + + @@ -442531,24 +438001,18 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + right arch 4 in human embryology.ch + + + + @@ -442559,23 +438023,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442586,23 +438044,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Wikipedia:Vitelline_vein + + + + @@ -442613,23 +438065,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Wikipedia + + + + @@ -442640,23 +438086,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + PMID:22179203 + + + + @@ -442667,23 +438107,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442694,23 +438128,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442721,23 +438149,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442748,23 +438170,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442775,23 +438191,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442802,23 +438212,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442829,23 +438233,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442856,23 +438254,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442883,23 +438275,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -442937,23 +438323,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -443024,23 +438404,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + https://github.com/obophenotype/uberon/wiki/The-neural-crest + + + + @@ -443051,23 +438425,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -443078,23 +438446,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -443105,23 +438467,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -443149,23 +438505,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + cjm + + + + @@ -443208,23 +438558,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + PMID:16417468 + + + + @@ -443235,23 +438579,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + PMID:16417468 + + + + @@ -443262,24 +438600,18 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + AAO https://github.com/geneontology/go-ontology/issues/16143 + + + + @@ -443305,23 +438637,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + teleosts + + + + @@ -443332,23 +438658,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + Mammals + + + + @@ -443359,23 +438679,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + conservatively place at deuterostome, excluding acoelomates + + + + @@ -443461,23 +438775,17 @@ The CBA/J inbred mouse strain is used to study granulomatous experimental autoim - - - - - - + - - - - - - + FMA + + + + @@ -449011,5 +444319,5 @@ e.g. if GP X enables ATPase coupled transporter activity' and 'ATPase - + diff --git a/src/ontology/Makefile b/src/ontology/Makefile index 9062c31..212ee5f 100644 --- a/src/ontology/Makefile +++ b/src/ontology/Makefile @@ -338,7 +338,7 @@ $(COMPONENTSDIR)/%: | $(COMPONENTSDIR) # Mirroring upstream ontologies # ---------------------------------------- -IMP=false# Global parameter to bypass import generation +IMP=true # Global parameter to bypass import generation MIR=false # Global parameter to bypass mirror generation IMP_LARGE=false # Global parameter to bypass handling of large imports diff --git a/src/ontology/components/all_templates.owl b/src/ontology/components/all_templates.owl index ed787fc..f50a604 100644 --- a/src/ontology/components/all_templates.owl +++ b/src/ontology/components/all_templates.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + @@ -1635,7 +1635,7 @@ - + Planned exposure to radiation generated through a device or exposure to a source emitting ionising radiation 0000-0002-5111-7263 diff --git a/src/ontology/imports/bfo_import.owl b/src/ontology/imports/bfo_import.owl index 6718d52..1593781 100644 --- a/src/ontology/imports/bfo_import.owl +++ b/src/ontology/imports/bfo_import.owl @@ -11,9 +11,9 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + - 2024-02-06 + 2024-04-26 diff --git a/src/ontology/imports/chebi_import.owl b/src/ontology/imports/chebi_import.owl index c240cec..e3c0999 100644 --- a/src/ontology/imports/chebi_import.owl +++ b/src/ontology/imports/chebi_import.owl @@ -10,8 +10,8 @@ xmlns:chebi="http://purl.obolibrary.org/obo/chebi/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - - 2024-02-06 + + 2024-04-26 diff --git a/src/ontology/imports/chmo_import.owl b/src/ontology/imports/chmo_import.owl index 8c714a6..5682f13 100644 --- a/src/ontology/imports/chmo_import.owl +++ b/src/ontology/imports/chmo_import.owl @@ -12,9 +12,9 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + - 2024-02-06 + 2024-04-26 diff --git a/src/ontology/imports/cob_import.owl b/src/ontology/imports/cob_import.owl index e9d2b8e..c738f94 100644 --- a/src/ontology/imports/cob_import.owl +++ b/src/ontology/imports/cob_import.owl @@ -10,8 +10,8 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - - 2024-02-06 + + 2024-04-26 diff --git a/src/ontology/imports/efo_import.owl b/src/ontology/imports/efo_import.owl index 77fcb9c..e6cffd1 100644 --- a/src/ontology/imports/efo_import.owl +++ b/src/ontology/imports/efo_import.owl @@ -16,8 +16,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2024-02-06 + + 2024-04-26 diff --git a/src/ontology/imports/envo_import.owl b/src/ontology/imports/envo_import.owl index 27d030a..4fe124e 100644 --- a/src/ontology/imports/envo_import.owl +++ b/src/ontology/imports/envo_import.owl @@ -19,8 +19,8 @@ xmlns:taxslim="http://purl.obolibrary.org/obo/ncbitaxon/subsets/taxslim#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - - 2024-02-08 + + 2024-04-26 diff --git a/src/ontology/imports/go_import.owl b/src/ontology/imports/go_import.owl index 3402bff..343f292 100644 --- a/src/ontology/imports/go_import.owl +++ b/src/ontology/imports/go_import.owl @@ -12,9 +12,9 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + - 2024-02-06 + 2024-04-26 diff --git a/src/ontology/imports/ncbitaxon_import.owl b/src/ontology/imports/ncbitaxon_import.owl index ff7d9ec..1fba7bc 100644 --- a/src/ontology/imports/ncbitaxon_import.owl +++ b/src/ontology/imports/ncbitaxon_import.owl @@ -11,8 +11,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2024-02-06 + + 2024-04-26 diff --git a/src/ontology/imports/obi_import.owl b/src/ontology/imports/obi_import.owl index b13c358..87ead9e 100644 --- a/src/ontology/imports/obi_import.owl +++ b/src/ontology/imports/obi_import.owl @@ -12,9 +12,9 @@ xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + - 2024-02-06 + 2024-04-26 diff --git a/src/ontology/imports/pato_import.owl b/src/ontology/imports/pato_import.owl index 1e0e4f9..d203de8 100644 --- a/src/ontology/imports/pato_import.owl +++ b/src/ontology/imports/pato_import.owl @@ -24,8 +24,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2024-02-06 + + 2024-04-26 diff --git a/src/ontology/imports/pco_import.owl b/src/ontology/imports/pco_import.owl index 29c5dc2..de96d77 100644 --- a/src/ontology/imports/pco_import.owl +++ b/src/ontology/imports/pco_import.owl @@ -17,9 +17,9 @@ xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + - 2024-02-06 + 2024-04-26 diff --git a/src/ontology/imports/ro_import.owl b/src/ontology/imports/ro_import.owl index 9caeca6..1e50cce 100644 --- a/src/ontology/imports/ro_import.owl +++ b/src/ontology/imports/ro_import.owl @@ -18,9 +18,9 @@ xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + - 2024-02-06 + 2024-04-26 diff --git a/src/ontology/imports/uberon_import.owl b/src/ontology/imports/uberon_import.owl index 1fdba70..772f727 100644 --- a/src/ontology/imports/uberon_import.owl +++ b/src/ontology/imports/uberon_import.owl @@ -32,8 +32,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2024-02-06 + + 2024-04-26 diff --git a/src/ontology/imports/uo_import.owl b/src/ontology/imports/uo_import.owl index 2ce1d84..a209525 100644 --- a/src/ontology/imports/uo_import.owl +++ b/src/ontology/imports/uo_import.owl @@ -8,8 +8,8 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - - 2024-02-06 + + 2024-04-26 diff --git a/src/ontology/reports/rbo-edit.owl-obo-report.tsv b/src/ontology/reports/rbo-edit.owl-obo-report.tsv index 98e4b91..c76aa56 100644 --- a/src/ontology/reports/rbo-edit.owl-obo-report.tsv +++ b/src/ontology/reports/rbo-edit.owl-obo-report.tsv @@ -1,4 +1,23 @@ Level Rule Name Subject Property Value +ERROR deprecated_boolean_datatype environmental study owl:deprecated A owl:deprecated +ERROR deprecated_boolean_datatype therapeutics study owl:deprecated A owl:deprecated +ERROR deprecated_boolean_datatype nuclear accident study owl:deprecated A owl:deprecated +ERROR deprecated_boolean_datatype biological process owl:deprecated owl:deprecated +ERROR deprecated_boolean_datatype cellular process owl:deprecated owl:deprecated +ERROR deprecated_boolean_datatype unplanned naturally occurring radiation exposure owl:deprecated TRUE +ERROR deprecated_boolean_datatype irradiation owl:deprecated TRUE +ERROR deprecated_boolean_datatype miligray per second owl:deprecated TRUE +ERROR deprecated_boolean_datatype radiation quality owl:deprecated TRUE +ERROR duplicate_label unplanned naturally occurring radiation exposure rdfs:label unplanned naturally occurring radiation exposure +ERROR duplicate_label unplanned naturally occurring radiation exposure rdfs:label unplanned naturally occurring radiation exposure +ERROR duplicate_label therapeutics study rdfs:label therapeutics study +ERROR duplicate_label therapeutics study rdfs:label therapeutics study +ERROR duplicate_label space flight rdfs:label space flight +ERROR duplicate_label space flight rdfs:label space flight +ERROR duplicate_label nuclear accident study rdfs:label nuclear accident study +ERROR duplicate_label nuclear accident study rdfs:label nuclear accident study +ERROR duplicate_label environmental study rdfs:label environmental study +ERROR duplicate_label environmental study rdfs:label environmental study ERROR missing_label BFO:0000023 rdfs:label ERROR missing_label CHEBI:33252 rdfs:label ERROR missing_label CHEBI:36080 rdfs:label @@ -17,16 +36,6 @@ ERROR missing_label SO:0000704 rdfs:label ERROR missing_label UBERON:0000000 rdfs:label ERROR missing_label UO:0000127 rdfs:label ERROR missing_label UO:0000160 rdfs:label -ERROR duplicate_label unplanned naturally occurring radiation exposure rdfs:label unplanned naturally occurring radiation exposure -ERROR duplicate_label unplanned naturally occurring radiation exposure rdfs:label unplanned naturally occurring radiation exposure -ERROR duplicate_label therapeutics study rdfs:label therapeutics study -ERROR duplicate_label therapeutics study rdfs:label therapeutics study -ERROR duplicate_label space flight rdfs:label space flight -ERROR duplicate_label space flight rdfs:label space flight -ERROR duplicate_label nuclear accident study rdfs:label nuclear accident study -ERROR duplicate_label nuclear accident study rdfs:label nuclear accident study -ERROR duplicate_label environmental study rdfs:label environmental study -ERROR duplicate_label environmental study rdfs:label environmental study WARN annotation_whitespace radiation response modifier IAO:0000115 Radiation response modifiers are agents that alter tumor or normal tissue response to radiation, such as radiation sensitizers and radiation protectors. WARN annotation_whitespace Iron-56 nucleus IAO:0000115 An atomic nucleus with 26 protons and 30 neutrons WARN annotation_whitespace Iron-56 nucleus IAO:0000118 Fe-56 ion;Fe-56 nucleus;Fe-56 @@ -59,7 +68,20 @@ WARN annotation_whitespace Titanium-48 nucleus IAO:0000118 Ti-48 ion;Ti-48 nuc WARN annotation_whitespace Krypton-84 nucleus IAO:0000115 An atomic nucleus with 36 protons and 48 neutrons WARN annotation_whitespace Krypton-84 nucleus IAO:0000118 Kr-84 ion;Kr-84 nucleus;Kr-84 WARN annotation_whitespace external radiation exposure IAO:0000112 Mice exposed to external radiation from a Sr source. -WARN missing_definition has atomic number IAO:0000115 +WARN duplicate_label_synonym charged particle IAO:0000118 charged particle +WARN duplicate_scoped_synonym ionizing radiation IAO:0000118 ionising radiation +WARN duplicate_scoped_synonym ionizing radiation oboInOwl:hasExactSynonym ionising radiation +WARN duplicate_scoped_synonym as low as reasonably achievable IAO:0000118 ALARA +WARN duplicate_scoped_synonym as low as reasonably achievable oboInOwl:hasExactSynonym ALARA +WARN duplicate_scoped_synonym delta ray IAO:0000118 delta electron +WARN duplicate_scoped_synonym delta ray oboInOwl:hasExactSynonym delta electron +WARN duplicate_scoped_synonym linear energy transfer IAO:0000118 LET +WARN duplicate_scoped_synonym linear energy transfer oboInOwl:hasExactSynonym LET +WARN duplicate_scoped_synonym relative biological effectiveness IAO:0000118 RBE +WARN duplicate_scoped_synonym relative biological effectiveness oboInOwl:hasExactSynonym RBE +WARN equivalent_class_axiom_no_genus particle track RO:0000086 particle track structure +WARN equivalent_class_axiom_no_genus track formation OBI:0000299 particle track +WARN missing_definition COB:0000800 IAO:0000115 WARN missing_definition BFO:0000023 IAO:0000115 WARN missing_definition CHEBI:33252 IAO:0000115 WARN missing_definition CHEBI:36080 IAO:0000115 @@ -89,22 +111,12 @@ WARN missing_definition SO:0000704 IAO:0000115 WARN missing_definition UBERON:0000000 IAO:0000115 WARN missing_definition UO:0000127 IAO:0000115 WARN missing_definition UO:0000160 IAO:0000115 -WARN duplicate_scoped_synonym ionizing radiation IAO:0000118 ionising radiation -WARN duplicate_scoped_synonym ionizing radiation oboInOwl:hasExactSynonym ionising radiation -WARN duplicate_scoped_synonym as low as reasonably achievable IAO:0000118 ALARA -WARN duplicate_scoped_synonym as low as reasonably achievable oboInOwl:hasExactSynonym ALARA -WARN duplicate_scoped_synonym delta ray IAO:0000118 delta electron -WARN duplicate_scoped_synonym delta ray oboInOwl:hasExactSynonym delta electron -WARN duplicate_scoped_synonym linear energy transfer IAO:0000118 LET -WARN duplicate_scoped_synonym linear energy transfer oboInOwl:hasExactSynonym LET -WARN duplicate_scoped_synonym relative biological effectiveness IAO:0000118 RBE -WARN duplicate_scoped_synonym relative biological effectiveness oboInOwl:hasExactSynonym RBE INFO lowercase_definition spacecraft module IAO:0000115 a self-contained unit of a spacecraft INFO lowercase_definition gamma radiation IAO:0000115 electromagnetic radiation with photon energies greater than approximately 100 keV -INFO lowercase_definition Gammacell 40 IAO:0000115 -INFO lowercase_definition RARAF 5.5 MV microbeam IAO:0000115 -INFO lowercase_definition Swift HALE IAO:0000115 -INFO lowercase_definition ER-2 IAO:0000115 -INFO lowercase_definition WB-57 IAO:0000115 -INFO lowercase_definition Faxitron CP160 IAO:0000115 -INFO lowercase_definition X-Rad320 IAO:0000115 +INFO lowercase_definition Gammacell 40 IAO:0000115 http://www.theratronics.ca/PDFs/GC40_BTMB_8008GC40E_2_v112013_webSECURE.pdf +INFO lowercase_definition RARAF 5.5 MV microbeam IAO:0000115 https://www.crr.columbia.edu/services/ion-beam-and-neutron-core-facility +INFO lowercase_definition Swift HALE IAO:0000115 https://www.nasa.gov/feature/ames/nasa-small-business-partnership-prepares-drone-for-30-day-science-flights +INFO lowercase_definition ER-2 IAO:0000115 https://www.nasa.gov/centers/armstrong/aircraft/ER-2/index.html +INFO lowercase_definition WB-57 IAO:0000115 https://airbornescience.nasa.gov/aircraft/WB-57_-_JSC +INFO lowercase_definition Faxitron CP160 IAO:0000115 doi: 10.2349/biij.2.1.e1 +INFO lowercase_definition X-Rad320 IAO:0000115 https://precisionxray.com/x-rad/xrad-320/ diff --git a/src/ontology/reports/rbo.owl-obo-report.tsv b/src/ontology/reports/rbo.owl-obo-report.tsv index e2b9493..cca001d 100644 --- a/src/ontology/reports/rbo.owl-obo-report.tsv +++ b/src/ontology/reports/rbo.owl-obo-report.tsv @@ -1,55 +1,13 @@ Level Rule Name Subject Property Value -ERROR multiple_equivalent_classes response to light stimulus owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid13334 -ERROR multiple_equivalent_classes response to light stimulus owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid13338 -ERROR multiple_equivalent_classes response to organic substance owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid13599 -ERROR multiple_equivalent_classes response to organic substance owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid13603 -ERROR multiple_equivalent_classes response to inorganic substance owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid13616 -ERROR multiple_equivalent_classes response to inorganic substance owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid13620 -ERROR multiple_equivalent_classes response to organonitrogen compound owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid13655 -ERROR multiple_equivalent_classes response to organonitrogen compound owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid13659 -ERROR multiple_equivalent_classes response to organic cyclic compound owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid14485 -ERROR multiple_equivalent_classes response to organic cyclic compound owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid14489 -ERROR multiple_equivalent_classes RNA biosynthetic process owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid17046 -ERROR multiple_equivalent_classes RNA biosynthetic process owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid17050 -ERROR multiple_equivalent_classes response to chemical owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid18364 -ERROR multiple_equivalent_classes response to chemical owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid18368 -ERROR multiple_equivalent_classes response to amino acid owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid18719 -ERROR multiple_equivalent_classes response to amino acid owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid18723 -ERROR multiple_equivalent_classes membrane biogenesis owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid19090 -ERROR multiple_equivalent_classes membrane biogenesis owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid19094 -ERROR multiple_equivalent_classes response to carbamate owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid20101 -ERROR multiple_equivalent_classes response to carbamate owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid20105 -ERROR multiple_equivalent_classes response to ammonium ion owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid22793 -ERROR multiple_equivalent_classes response to ammonium ion owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid22797 -ERROR multiple_equivalent_classes nuclear membrane biogenesis owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid26264 -ERROR multiple_equivalent_classes nuclear membrane biogenesis owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid26268 -ERROR multiple_equivalent_classes catalytic activity, acting on a protein owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid26558 -ERROR multiple_equivalent_classes catalytic activity, acting on a protein owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid26562 -ERROR multiple_equivalent_classes catalytic activity, acting on RNA owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid26575 -ERROR multiple_equivalent_classes catalytic activity, acting on RNA owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid26579 -ERROR multiple_equivalent_classes catalytic activity, acting on a nucleic acid owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid26757 -ERROR multiple_equivalent_classes catalytic activity, acting on a nucleic acid owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid26761 -ERROR multiple_equivalent_classes response to peptide owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid27868 -ERROR multiple_equivalent_classes response to peptide owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid27872 -ERROR multiple_equivalent_classes response to nitrogen compound owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid27917 -ERROR multiple_equivalent_classes response to nitrogen compound owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid27921 -ERROR multiple_equivalent_classes response to oxygen-containing compound owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid27928 -ERROR multiple_equivalent_classes response to oxygen-containing compound owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid27932 -ERROR multiple_equivalent_classes obsolescence reason specification owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid34926 -ERROR multiple_equivalent_classes obsolescence reason specification owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid34932 -ERROR multiple_equivalent_classes epithelium owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid37648 -ERROR multiple_equivalent_classes epithelium owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid37652 -ERROR multiple_equivalent_classes trunk or cervical vertebra owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid46380 -ERROR multiple_equivalent_classes trunk or cervical vertebra owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid46384 -ERROR multiple_equivalent_classes cervical vertebra endochondral element owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid53679 -ERROR multiple_equivalent_classes cervical vertebra endochondral element owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid53683 -ERROR multiple_equivalent_classes thoracic vertebra endochondral element owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid53691 -ERROR multiple_equivalent_classes thoracic vertebra endochondral element owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid53695 -ERROR multiple_equivalent_classes caudal vertebra endochondral element owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid54090 -ERROR multiple_equivalent_classes caudal vertebra endochondral element owl:equivalentClass 6b333306-b710-4c2b-afe6-84c99ec1b873genid54094 -ERROR missing_label http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled label -ERROR missing_label xsd:boolean label -ERROR missing_label xsd:string label +ERROR deprecated_boolean_datatype environmental study owl:deprecated A owl:deprecated +ERROR deprecated_boolean_datatype therapeutics study owl:deprecated A owl:deprecated +ERROR deprecated_boolean_datatype nuclear accident study owl:deprecated A owl:deprecated +ERROR deprecated_boolean_datatype biological process owl:deprecated owl:deprecated +ERROR deprecated_boolean_datatype cellular process owl:deprecated owl:deprecated +ERROR deprecated_boolean_datatype unplanned naturally occurring radiation exposure owl:deprecated TRUE +ERROR deprecated_boolean_datatype irradiation owl:deprecated TRUE +ERROR deprecated_boolean_datatype miligray per second owl:deprecated TRUE +ERROR deprecated_boolean_datatype radiation quality owl:deprecated TRUE ERROR duplicate_label unplanned naturally occurring radiation exposure label unplanned naturally occurring radiation exposure ERROR duplicate_label unplanned naturally occurring radiation exposure label unplanned naturally occurring radiation exposure ERROR duplicate_label thorium label thorium @@ -88,29 +46,32 @@ ERROR duplicate_label environmental study label environmental study ERROR duplicate_label environmental study label environmental study ERROR duplicate_label cellular process label cellular process ERROR duplicate_label cellular process label cellular process +ERROR missing_label http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled label +ERROR missing_label xsd:boolean label +ERROR missing_label xsd:string label ERROR multiple_definitions independent continuant textual definition A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything.@en -ERROR multiple_definitions independent continuant textual definition -ERROR multiple_definitions independent continuant textual definition +ERROR multiple_definitions independent continuant textual definition b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002]) +ERROR multiple_definitions independent continuant textual definition b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])@en ERROR multiple_definitions process textual definition A process is an entity that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity during the time it occurs. ERROR multiple_definitions process textual definition An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.@en -ERROR multiple_definitions process textual definition

+ERROR multiple_definitions process textual definition p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])@en ERROR multiple_definitions specifically dependent continuant textual definition A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.@en ERROR multiple_definitions specifically dependent continuant textual definition An experimental factor which is a property or characteristic of some other entity. For example, the mouse has the colour white. -ERROR multiple_definitions specifically dependent continuant textual definition -ERROR multiple_definitions specifically dependent continuant textual definition +ERROR multiple_definitions specifically dependent continuant textual definition b is a relational specifically dependent continuant = Def. b is a specifically dependent continuant and there are n > 1 independent continuants c1, … cn which are not spatial regions are such that for all 1 i < j n, ci and cj share no common parts, are such that for each 1 i n, b s-depends_on ci at every time t during the course of b’s existence (axiom label in BFO2 Reference: [131-004])@en +ERROR multiple_definitions specifically dependent continuant textual definition b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])@en ERROR multiple_definitions role textual definition A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts.@en ERROR multiple_definitions role textual definition A role is an entity which is borne in a material entity in some kinds of natural, social or institutional contexts, but which is not essential to the fundamental definition of that material entity (i.e. the material entity exists with or without the role). For example, the role of a person as a surgeon, the role of an artificial heart in pumping blood, the role of a chemical compound in an experiment, the role of a drug in the treatment of a disease. ERROR multiple_definitions generically dependent continuant textual definition A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time.@en -ERROR multiple_definitions generically dependent continuant textual definition +ERROR multiple_definitions generically dependent continuant textual definition b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])@en ERROR multiple_definitions material entity textual definition A material entity is an entity that exists in full during the length of time of its existence, persists through this time while maintaining its identity and has no temporal parts. For example a heart, a human, a fly, a microarray. ERROR multiple_definitions material entity textual definition An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.@en -ERROR multiple_definitions part_of textual definition +ERROR multiple_definitions part_of textual definition For continuants: C part_of C' if and only if: given any c that instantiates C at a time t, there is some c' such that c' instantiates C' at time t, and c *part_of* c' at t. For processes: P part_of P' if and only if: given any p that instantiates P at a time t, there is some p' such that p' instantiates P' at time t, and p *part_of* p' at t. (Here *part_of* is the instance-level part-relation.) ERROR multiple_definitions part_of textual definition a core relation that holds between a part and its whole@en ERROR multiple_definitions cell textual definition A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane. ERROR multiple_definitions cell textual definition A material entity that has a plasma membrane and results from cellular division. -ERROR multiple_definitions cellular_component textual definition -ERROR multiple_definitions cellular_component textual definition -ERROR multiple_definitions cellular_component textual definition +ERROR multiple_definitions cellular_component textual definition A location, relative to cellular compartments and structures, occupied by a macromolecular machine when it carries out a molecular function. There are two ways in which the gene ontology describes locations of gene products: (1) relative to cellular structures (e.g., cytoplasmic side of plasma membrane) or compartments (e.g., mitochondrion), and (2) the stable macromolecular complexes of which they are parts (e.g., the ribosome). +ERROR multiple_definitions cellular_component textual definition A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex). +ERROR multiple_definitions cellular_component textual definition A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex). ERROR multiple_definitions biological_process textual definition A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. ERROR multiple_definitions biological_process textual definition A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. ERROR multiple_definitions gene expression textual definition The process in which a gene's sequence is converted into a mature gene product (protein or RNA). This includes the production of an RNA transcript and its processing, as well as translation and maturation for protein-coding genes. @@ -123,10 +84,10 @@ ERROR multiple_definitions plan specification textual definition A directive inf ERROR multiple_definitions plan specification textual definition A directive information entity with action specifications and objective specifications as parts, and that may be concretized as a realizable entity that, if realized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified.@en ERROR multiple_definitions textual definition textual definition The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.@en ERROR multiple_definitions textual definition textual definition The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.@en -ERROR multiple_definitions alternative term textual definition +ERROR multiple_definitions alternative term textual definition A label for a class or property that can be used to refer to the class or property instead of the preferred rdfs:label. Alternative labels should be used to indicate community- or context-specific labels, abbreviations, shorthand forms and the like.@en ERROR multiple_definitions alternative term textual definition An alternative name for a class or property which means the same thing as the preferred name (semantically equivalent)@en -ERROR multiple_definitions definition source textual definition -ERROR multiple_definitions definition source textual definition +ERROR multiple_definitions definition source textual definition Formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007@en +ERROR multiple_definitions definition source textual definition formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007@en ERROR multiple_definitions population textual definition A population is a group of material entities consisting of individuals which share a particular characteristic such as inhabiting a particular region or area or ability to interbreed. ERROR multiple_definitions population textual definition a population is a collection of individuals from the same taxonomic class living, counted or sampled at a particular site or in a particular area@en ERROR multiple_definitions protocol textual definition A plan specification which has sufficient level of detail and quantitative information to communicate it between investigation agents, so that different investigation agents will reliably be able to independently reproduce the process.@en @@ -146,10 +107,10 @@ ERROR multiple_definitions has participant textual definition a relation between ERROR multiple_definitions overlaps textual definition x overlaps y if and only if there exists some z such that x has part z and z part of y ERROR multiple_definitions overlaps textual definition x overlaps y iff they have some part in common. ERROR multiple_definitions regulates (processual) textual definition p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. -ERROR multiple_definitions regulates (processual) textual definition -ERROR multiple_definitions negatively regulates textual definition +ERROR multiple_definitions regulates (processual) textual definition process(P1) regulates process(P2) iff: P1 results in the initiation or termination of P2 OR affects the frequency of its initiation or termination OR affects the magnitude or rate of output of P2. +ERROR multiple_definitions negatively regulates textual definition Process(P1) negatively regulates process(P2) iff: P1 terminates P2, or P1 descreases the the frequency of initiation of P2 or the magnitude or rate of output of P2. ERROR multiple_definitions negatively regulates textual definition p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. -ERROR multiple_definitions positively regulates textual definition +ERROR multiple_definitions positively regulates textual definition Process(P1) postively regulates process(P2) iff: P1 initiates P2, or P1 increases the the frequency of initiation of P2 or the magnitude or rate of output of P2. ERROR multiple_definitions positively regulates textual definition p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q. ERROR multiple_definitions characteristic of part of textual definition q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w. ERROR multiple_definitions characteristic of part of textual definition q inheres in part of w if and only if there exists some p such that q inheres in p and p part of w. @@ -162,10 +123,10 @@ ERROR multiple_definitions immediately causally upstream of textual definition p ERROR multiple_definitions causally upstream of or within textual definition p 'causally upstream or within' q iff (1) the end of p is before the end of q and (2) the execution of p exerts some causal influence over the outputs of q; i.e. if p was abolished or the outputs of p were to be modified, this would necessarily affect q. ERROR multiple_definitions causally upstream of or within textual definition p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q. ERROR multiple_definitions existence ends during textual definition Relation between continuant c and occurrent s, such that every instance of c ceases to exist during some s, if it does not die prematurely. -ERROR multiple_definitions existence ends during textual definition = α(y).> +ERROR multiple_definitions existence ends during textual definition x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y). ERROR multiple_definitions causal relation between processes textual definition p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one of direct activation or direct inhibition. p may be upstream, downstream, part of or a container of q. ERROR multiple_definitions causal relation between processes textual definition p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. -ERROR multiple_definitions directly regulates textual definition +ERROR multiple_definitions directly regulates textual definition Process(P1) directly regulates process(P2) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2. ERROR multiple_definitions directly regulates textual definition p directly regulates q iff p is immediately causally upstream of q and p regulates q. ERROR multiple_definitions anatomical cluster textual definition Anatomical group that has its parts adjacent to one another. ERROR multiple_definitions anatomical cluster textual definition Anatomical group whose component anatomical structures lie in close proximity to each other. @@ -177,6 +138,24 @@ ERROR multiple_definitions absorbed dose unit textual definition A derived unit ERROR multiple_definitions absorbed dose unit textual definition A unit which is a standard measure of the energy imparted by ionizing radiation to unit mass of matter such as tissue. ERROR multiple_definitions has exact synonym textual definition An alternative label for a class or property which has the exact same meaning than the preferred name/primary label. ERROR multiple_definitions has exact synonym textual definition An alternative label for a given entity such as a commonly used abbreviation or synonym. +ERROR multiple_equivalent_class_definitions response to light stimulus owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to organic substance owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to inorganic substance owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to organonitrogen compound owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to organic cyclic compound owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions RNA biosynthetic process owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to chemical owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to amino acid owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions membrane biogenesis owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to carbamate owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to ammonium ion owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions nuclear membrane biogenesis owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions catalytic activity, acting on a protein owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions catalytic activity, acting on RNA owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions catalytic activity, acting on a nucleic acid owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to peptide owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to nitrogen compound owl:equivalentClass blank node +ERROR multiple_equivalent_class_definitions response to oxygen-containing compound owl:equivalentClass blank node ERROR multiple_labels continuant label continuant ERROR multiple_labels continuant label continuant@en ERROR multiple_labels independent continuant label independent continuant @@ -437,52 +416,75 @@ ERROR multiple_labels Date label Date@en-us ERROR multiple_labels Description label Description ERROR multiple_labels Description label Description@en-us ERROR multiple_labels Description label description -ERROR multiple_labels title label Title -ERROR multiple_labels title label Title@en-us -ERROR multiple_labels title label title +ERROR multiple_labels Title label Title +ERROR multiple_labels Title label Title@en-us +ERROR multiple_labels Title label title ERROR multiple_labels created_by label created by ERROR multiple_labels created_by label created_by ERROR multiple_labels has_broad_synonym label has broad synonym@en ERROR multiple_labels has_broad_synonym label has_broad_synonym ERROR multiple_labels has exact synonym label has exact synonym@en ERROR multiple_labels has exact synonym label has_exact_synonym -WARN annotation_whitespace continuant IAO:0000602 <(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] > -WARN annotation_whitespace continuant IAO:0000602 <(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] > -WARN annotation_whitespace continuant IAO:0000602 <(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] > -WARN annotation_whitespace continuant IAO:0000602 <(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] > -WARN annotation_whitespace occurrent IAO:0000602 <(forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] > -WARN annotation_whitespace occurrent IAO:0000602 <(forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] > -WARN annotation_whitespace independent continuant IAO:0000602 <(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] > -WARN annotation_whitespace independent continuant IAO:0000602 <(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] > -WARN annotation_whitespace independent continuant IAO:0000602 <(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] > -WARN annotation_whitespace spatial region IAO:0000602 <(forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001] > -WARN annotation_whitespace spatial region IAO:0000602 <(forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001] > -WARN annotation_whitespace process IAO:0000602 <(iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] > -WARN annotation_whitespace disposition IAO:0000602 <(forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] > -WARN annotation_whitespace disposition IAO:0000602 <(forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] > -WARN annotation_whitespace realizable entity IAO:0000602 <(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] > -WARN annotation_whitespace realizable entity IAO:0000602 <(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] > -WARN annotation_whitespace quality IAO:0000602 <(forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] > -WARN annotation_whitespace quality IAO:0000602 <(forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] > -WARN annotation_whitespace specifically dependent continuant IAO:0000602 <(iff (RelationalSpecificallyDependentContinuant a) (and (SpecificallyDependentContinuant a) (forall (t) (exists (b c) (and (not (SpatialRegion b)) (not (SpatialRegion c)) (not (= b c)) (not (exists (d) (and (continuantPartOfAt d b t) (continuantPartOfAt d c t)))) (specificallyDependsOnAt a b t) (specificallyDependsOnAt a c t)))))) // axiom label in BFO2 CLIF: [131-004] > -WARN annotation_whitespace specifically dependent continuant IAO:0000602 <(iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] > -WARN annotation_whitespace role IAO:0000602 <(forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] > +WARN annotation_whitespace continuant IAO:0000602 (forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] +WARN annotation_whitespace continuant IAO:0000602 (forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] +WARN annotation_whitespace continuant IAO:0000602 (forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] +WARN annotation_whitespace continuant IAO:0000602 (forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] +WARN annotation_whitespace occurrent IAO:0000602 (forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] +WARN annotation_whitespace occurrent IAO:0000602 (forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] +WARN annotation_whitespace independent continuant IAO:0000602 (forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] +WARN annotation_whitespace independent continuant IAO:0000602 (forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] +WARN annotation_whitespace independent continuant IAO:0000602 (iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] +WARN annotation_whitespace spatial region IAO:0000602 (forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001] +WARN annotation_whitespace spatial region IAO:0000602 (forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001] +WARN annotation_whitespace process IAO:0000602 (iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] +WARN annotation_whitespace disposition IAO:0000602 (forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] +WARN annotation_whitespace disposition IAO:0000602 (forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] +WARN annotation_whitespace realizable entity IAO:0000602 (forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] +WARN annotation_whitespace realizable entity IAO:0000602 (forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] +WARN annotation_whitespace quality IAO:0000602 (forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] +WARN annotation_whitespace quality IAO:0000602 (forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] +WARN annotation_whitespace specifically dependent continuant IAO:0000602 (iff (RelationalSpecificallyDependentContinuant a) (and (SpecificallyDependentContinuant a) (forall (t) (exists (b c) (and (not (SpatialRegion b)) (not (SpatialRegion c)) (not (= b c)) (not (exists (d) (and (continuantPartOfAt d b t) (continuantPartOfAt d c t)))) (specificallyDependsOnAt a b t) (specificallyDependsOnAt a c t)))))) // axiom label in BFO2 CLIF: [131-004] +WARN annotation_whitespace specifically dependent continuant IAO:0000602 (iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] +WARN annotation_whitespace role IAO:0000602 (forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] WARN annotation_whitespace object aggregate editor note An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects -WARN annotation_whitespace object aggregate IAO:0000602 <(forall (x) (if (ObjectAggregate x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y z) (and (Object y) (Object z) (memberPartOfAt y x t) (memberPartOfAt z x t) (not (= y z)))))) (not (exists (w t_1) (and (memberPartOfAt w x t_1) (not (Object w)))))))) // axiom label in BFO2 CLIF: [025-004] > -WARN annotation_whitespace generically dependent continuant IAO:0000602 <(iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] > -WARN annotation_whitespace function IAO:0000602 <(forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] > -WARN annotation_whitespace material entity IAO:0000602 <(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] > -WARN annotation_whitespace material entity IAO:0000602 <(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] > -WARN annotation_whitespace material entity IAO:0000602 <(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] > -WARN annotation_whitespace cell database_cross_reference -WARN annotation_whitespace cell database_cross_reference -WARN annotation_whitespace cell database_cross_reference -WARN annotation_whitespace cell database_cross_reference -WARN annotation_whitespace cell database_cross_reference -WARN annotation_whitespace cell database_cross_reference -WARN annotation_whitespace cell database_cross_reference -WARN annotation_whitespace datum label IAO:0000232 <9/22/11 BP: changed the rdfs:label for this class from 'label' to 'datum label' to convey that this class is not intended to cover all kinds of labels (stickers, radiolabels, etc.), and not even all kind of textual labels, but rather the kind of labels occuring in a datum. > -WARN annotation_whitespace textual definition editor note <2012-04-05: Barry SmithThe official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible.Can you fix to something like:A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property.Alan RuttenbergYour proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria. On the specifics of the proposed definition:We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition. Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable. We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with. @en> +WARN annotation_whitespace object aggregate IAO:0000602 (forall (x) (if (ObjectAggregate x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y z) (and (Object y) (Object z) (memberPartOfAt y x t) (memberPartOfAt z x t) (not (= y z)))))) (not (exists (w t_1) (and (memberPartOfAt w x t_1) (not (Object w)))))))) // axiom label in BFO2 CLIF: [025-004] +WARN annotation_whitespace generically dependent continuant IAO:0000602 (iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] +WARN annotation_whitespace function IAO:0000602 (forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] +WARN annotation_whitespace material entity IAO:0000602 (forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] +WARN annotation_whitespace material entity IAO:0000602 (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] +WARN annotation_whitespace material entity IAO:0000602 (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] +WARN annotation_whitespace cell database_cross_reference "CALOHA:TS-2035 +" +WARN annotation_whitespace cell database_cross_reference FMA:68646 +WARN annotation_whitespace cell database_cross_reference GO:0005623 +WARN annotation_whitespace cell database_cross_reference "KUPO:0000002 + +" +WARN annotation_whitespace cell database_cross_reference VHOG:0001533 +WARN annotation_whitespace cell database_cross_reference WBbt:0004017 +WARN annotation_whitespace cell database_cross_reference XAO:0003012 +WARN annotation_whitespace datum label IAO:0000232 "9/22/11 BP: changed the rdfs:label for this class from 'label' to 'datum label' to convey that this class is not intended to cover all kinds of labels (stickers, radiolabels, etc.), and not even all kind of textual labels, but rather the kind of labels occuring in a datum. +" +WARN annotation_whitespace textual definition editor note "2012-04-05: +Barry Smith + +The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible. + +Can you fix to something like: + +A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property. + +Alan Ruttenberg + +Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria. + +On the specifics of the proposed definition: + +We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition. + +Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable. + +We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with. @en" WARN annotation_whitespace radiation response modifier textual definition Radiation response modifiers are agents that alter tumor or normal tissue response to radiation, such as radiation sensitizers and radiation protectors. WARN annotation_whitespace Iron-56 nucleus textual definition An atomic nucleus with 26 protons and 30 neutrons WARN annotation_whitespace Iron-56 nucleus alternative term Fe-56 ion;Fe-56 nucleus;Fe-56 @@ -516,23 +518,35 @@ WARN annotation_whitespace Krypton-84 nucleus textual definition An atomic nucle WARN annotation_whitespace Krypton-84 nucleus alternative term Kr-84 ion;Kr-84 nucleus;Kr-84 WARN annotation_whitespace external radiation exposure example of usage Mice exposed to external radiation from a Sr source. WARN annotation_whitespace internal experimental radiation exposure rdfs:comment Research subjects participating in a clinical trial using an internally implanted radiation source have an internal experimental radiation exposure -WARN annotation_whitespace contained in editor note -WARN annotation_whitespace ends during rdfs:comment +WARN annotation_whitespace contained in editor note "Intended meaning: +domain: material entity +range: spatial region or site (immaterial continuant) + @en" +WARN annotation_whitespace ends during rdfs:comment X ends_during Y iff: ((start(Y) before_or_simultaneous_with end(X)) AND end(X) before_or_simultaneous_with end(Y). @en WARN annotation_whitespace synapsed by textual definition Relation between an anatomical structure (including cells) and a neuron that chemically synapses to it. @en WARN annotation_whitespace synapsed to textual definition " Relation between a neuron and an anatomical structure (including cells) that it chemically synapses to. @en" WARN annotation_whitespace spatially disjoint from editor note There are two ways to encode this as a shortcut relation. The other possibility to use an annotation assertion between two classes, and expand this to a disjointness axiom. @en WARN annotation_whitespace capable of textual definition A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. WARN annotation_whitespace developmentally induced by definition source Developmental Biology, Gilbert, 8th edition, figure 6.5(F) -WARN annotation_whitespace results in maturation of example of usage < an annotation of gene X to cell maturation with results_in_maturation_of CL:0000057 (fibroblast) means that the fibroblast is mature at the end of the process> +WARN annotation_whitespace results in maturation of example of usage an annotation of gene X to cell maturation with results_in_maturation_of CL:0000057 (fibroblast) means that the fibroblast is mature at the end of the process WARN annotation_whitespace results in transport along textual definition Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l WARN annotation_whitespace siemens has exact synonym mho WARN annotation_whitespace electric field strength unit has exact synonym E-field strength -WARN annotation_whitespace title Description " +WARN annotation_whitespace Title Description " Typically, a Title will be a name by which the resource is formally known. @en-us" -WARN annotation_whitespace BALB/c rdfs:comment BALB/c>CD1>129X1/SvJ. Variations were also found in the timeline of response and cell types most impacted.BALB/c mice immunized with PLP180-199 develop an atypical form of experimental autoimmune encephalomyelitis (EAE) in which susceptibility is determined by location. In the spinal cord 60-70% mice develop pathological lesions and in the brain and cerebellum 100% of mice develop sever lesions.Dorso-ventral vaginal septa is observed in some BALB/cJ females, and may contribute to non-productive females in this strain. (Cunliffe-Beamer T, Lab Anim Sci, 1976)> +WARN annotation_whitespace BALB/c rdfs:comment "Description from https://www.jax.org/strain/000651: + +BALB/c mice are particularly well known for the production of plasmacytomas following injection with mineral oil forming the basis for the production of monoclonal antibodies. Although not all BALB/c substrains have been examined for plasmacytoma induction, substrains derived from the Andervont (An) lineage (which includes BALB/cByJ) typically are susceptible, while those descended from BALB/cJ are resistant (see: Potter M, 1985). Mammary tumor incidence is normally low but infection with mammary tumor virus by fostering to MMTV+ C3H mice dramatically increases tumor number and age of onset. BALB/c mice develop other cancers later in life including reticular neoplasms, primary lung tumors, and renal tumors. Rare spontaneous myoepitheliomas arising from myoepithelial cells of various exocrine glands have been observed in both BALB/cJ and BALB/cByJ substrains. + +White et al. reported a variation in thioglycolate medium-induced peritoneal leukocyte recruitment in 4 analyzed strains. The response of total leukocyte recruitment, from greatest to least, was C57BL/6J>BALB/c>CD1>129X1/SvJ. Variations were also found in the timeline of response and cell types most impacted. + +BALB/c mice immunized with PLP180-199 develop an atypical form of experimental autoimmune encephalomyelitis (EAE) in which susceptibility is determined by location. In the spinal cord 60-70% mice develop pathological lesions and in the brain and cerebellum 100% of mice develop sever lesions. + +Dorso-ventral vaginal septa is observed in some BALB/cJ females, and may contribute to non-productive females in this strain. (Cunliffe-Beamer T, Lab Anim Sci, 1976) +" WARN annotation_whitespace CAST/EiJ textual definition " Both CAST/EiJ and CASA/RkJ (Stock No. 000735) were derived from wild mice trapped in Thailand. CAST is often combined with the common laboratory strains to generate F1 hybrids with high levels of heterozygosity for use in genetic mapping. Unlike the wild-derived strain SPRET, male F1 mice from a CAST cross are fertile. @@ -564,8 +578,8 @@ WARN duplicate_exact_synonym Stage IIB (AJCC 7th) alternative term Stage IIB WARN duplicate_exact_synonym Stage IIB (FIGO) alternative term Stage IIB WARN duplicate_exact_synonym Stage IIA (AJCC 7th) alternative term Stage IIA WARN duplicate_exact_synonym Stage IIA (FIGO) alternative term Stage IIA -WARN duplicate_exact_synonym pathologic lymph node stage for colon and rectum according to AJCC 7th edition alternative term -WARN duplicate_exact_synonym pathologic lymph node stage for lung according to AJCC 7th edition alternative term +WARN duplicate_exact_synonym pathologic lymph node stage for colon and rectum according to AJCC 7th edition alternative term pN: Pathologic spread colon lymph nodes (AJCC 7th Edition) +WARN duplicate_exact_synonym pathologic lymph node stage for lung according to AJCC 7th edition alternative term pN: Pathologic spread colon lymph nodes (AJCC 7th Edition) WARN duplicate_exact_synonym picometer has exact synonym pm WARN duplicate_exact_synonym picomolal has exact synonym pm WARN duplicate_exact_synonym mass volume percentage alternative term percent vol per vol @@ -631,8 +645,6 @@ WARN duplicate_exact_synonym parts per quadrillion has exact synonym 10^[-15] WARN duplicate_exact_synonym femto has exact synonym 10^[-15] WARN duplicate_exact_synonym parts per trillion has exact synonym 10^[-12] WARN duplicate_exact_synonym pico has exact synonym 10^[-12] -WARN equivalent_pair role owl:equivalentClass -WARN equivalent_pair protein owl:equivalentClass WARN duplicate_label_synonym specifically dependent continuant has exact synonym specifically dependent continuant WARN duplicate_label_synonym part_of has exact synonym part of WARN duplicate_label_synonym electron has exact synonym electron @@ -668,6 +680,7 @@ WARN duplicate_label_synonym metabolite has exact synonym metabolite WARN duplicate_label_synonym molecule has exact synonym molecule WARN duplicate_label_synonym oxide has exact synonym oxide WARN duplicate_label_synonym oxygen molecular entity has exact synonym oxygen molecular entity +WARN duplicate_label_synonym phosphate has exact synonym phosphate WARN duplicate_label_synonym phosphoric acid has exact synonym phosphoric acid WARN duplicate_label_synonym sulfates has exact synonym sulfates WARN duplicate_label_synonym sulfur molecular entity has exact synonym sulfur molecular entity @@ -688,6 +701,7 @@ WARN duplicate_label_synonym photon has exact synonym photon WARN duplicate_label_synonym alpha-particle has exact synonym alpha-particle WARN duplicate_label_synonym neutron has exact synonym neutron WARN duplicate_label_synonym thallium has exact synonym thallium +WARN duplicate_label_synonym amide has exact synonym amide WARN duplicate_label_synonym organyl group has exact synonym organyl group WARN duplicate_label_synonym atom has exact synonym atom WARN duplicate_label_synonym nucleon has exact synonym nucleon @@ -731,6 +745,7 @@ WARN duplicate_label_synonym macromolecule has exact synonym macromolecule WARN duplicate_label_synonym phenols has exact synonym phenols WARN duplicate_label_synonym reagent has exact synonym reagent WARN duplicate_label_synonym aldohexose has exact synonym aldohexose +WARN duplicate_label_synonym azane has exact synonym azane WARN duplicate_label_synonym inhibitor has exact synonym inhibitor WARN duplicate_label_synonym catalyst has exact synonym catalyst WARN duplicate_label_synonym amino acid zwitterion has exact synonym amino acid zwitterion @@ -780,33 +795,42 @@ WARN duplicate_label_synonym tungsten-183 has exact synonym tungsten-183 WARN duplicate_label_synonym cadmium-111 has exact synonym cadmium-111 WARN duplicate_label_synonym cadmium-113 has exact synonym cadmium-113 WARN duplicate_label_synonym molybdenum-95 has exact synonym molybdenum-95 -WARN duplicate_label_synonym glucagon has_related_synonym glucagon -WARN duplicate_label_synonym somatostatin has_related_synonym somatostatin -WARN duplicate_label_synonym mesenchymal stem cell has_related_synonym mesenchymal stem cell -WARN duplicate_label_synonym ice field has_related_synonym ice field +WARN duplicate_label_synonym dosimeter has exact synonym dosimeter +WARN duplicate_label_synonym nucleus has exact synonym nucleus +WARN duplicate_label_synonym behavior has exact synonym behavior +WARN duplicate_label_synonym mastication has exact synonym mastication WARN duplicate_label_synonym information content entity has exact synonym information content entity +WARN duplicate_label_synonym plan specification has exact synonym plan specification +WARN duplicate_label_synonym chewing has exact synonym chewing WARN duplicate_label_synonym Mus has exact synonym Mus +WARN duplicate_label_synonym actinium has exact synonym actinium +WARN duplicate_label_synonym americium has exact synonym americium +WARN duplicate_label_synonym californium has exact synonym californium +WARN duplicate_label_synonym neptunium has exact synonym neptunium +WARN duplicate_label_synonym plutonium has exact synonym plutonium +WARN duplicate_label_synonym thorium has exact synonym thorium +WARN duplicate_label_synonym uranium has exact synonym uranium +WARN duplicate_label_synonym biological process has exact synonym biological process +WARN duplicate_label_synonym charged particle alternative term charged particle +WARN duplicate_label_synonym overlaps alternative term overlaps +WARN duplicate_label_synonym connected to alternative term connected to WARN duplicate_label_synonym characteristic of part of alternative term inheres in part of +WARN duplicate_label_synonym produces alternative term produces WARN duplicate_label_synonym sympathetic nervous system has exact synonym sympathetic nervous system WARN duplicate_label_synonym endocrine pancreas has exact synonym endocrine pancreas WARN duplicate_label_synonym exocrine pancreas has exact synonym exocrine pancreas -WARN duplicate_label_synonym lung bud has_related_synonym lung bud +WARN duplicate_label_synonym life cycle stage has exact synonym life cycle stage WARN duplicate_label_synonym anal canal has exact synonym anal canal WARN duplicate_label_synonym colonic mucosa has exact synonym colonic mucosa WARN duplicate_label_synonym organism substance has exact synonym organism substance WARN duplicate_label_synonym simple columnar epithelium has exact synonym simple columnar epithelium WARN duplicate_label_synonym endocrine system has exact synonym endocrine system -WARN duplicate_label_synonym pleura has_related_synonym pleura WARN duplicate_label_synonym respiratory system has exact synonym respiratory system WARN duplicate_label_synonym musculature has exact synonym musculature WARN duplicate_label_synonym posterior vena cava has exact synonym posterior vena cava -WARN duplicate_label_synonym caudal vertebra has_broad_synonym caudal vertebra -WARN duplicate_label_synonym sigmoid colon has_related_synonym sigmoid colon -WARN duplicate_label_synonym sphincter pupillae has_related_synonym sphincter pupillae WARN duplicate_label_synonym orbit of skull has exact synonym orbit of skull WARN duplicate_label_synonym cranial ganglion has exact synonym cranial ganglion WARN duplicate_label_synonym uvea has exact synonym uvea -WARN duplicate_label_synonym optic choroid has_related_synonym optic choroid WARN duplicate_label_synonym rhombomere has exact synonym rhombomere WARN duplicate_label_synonym submucosa of esophagus has exact synonym submucosa of esophagus WARN duplicate_label_synonym gray matter has exact synonym gray matter @@ -818,14 +842,12 @@ WARN duplicate_label_synonym artery smooth muscle tissue has exact synonym arter WARN duplicate_label_synonym gray matter of spinal cord has exact synonym gray matter of spinal cord WARN duplicate_label_synonym sinoatrial node has exact synonym sinoatrial node WARN duplicate_label_synonym cardiac Purkinje fiber has exact synonym cardiac Purkinje fiber -WARN duplicate_label_synonym cranial muscle has_related_synonym cranial muscle WARN duplicate_label_synonym cartilage tissue has exact synonym cartilage tissue WARN duplicate_label_synonym esophagus mucosa has exact synonym esophagus mucosa WARN duplicate_label_synonym iris epithelium has exact synonym iris epithelium WARN duplicate_label_synonym cervical spinal cord has exact synonym cervical spinal cord WARN duplicate_label_synonym trigeminal nucleus has exact synonym trigeminal nucleus WARN duplicate_label_synonym thoracic spinal cord has exact synonym thoracic spinal cord -WARN duplicate_label_synonym periderm has_related_synonym periderm WARN duplicate_label_synonym skeletal muscle tissue of eye has exact synonym skeletal muscle tissue of eye WARN duplicate_label_synonym cardiac muscle tissue of interventricular septum has exact synonym cardiac muscle tissue of interventricular septum WARN duplicate_label_synonym skeletal muscle tissue of pharynx has exact synonym skeletal muscle tissue of pharynx @@ -837,14 +859,12 @@ WARN duplicate_label_synonym skeletal muscle tissue of trunk has exact synonym s WARN duplicate_label_synonym reproductive gland has exact synonym reproductive gland WARN duplicate_label_synonym germinal neuroepithelium has exact synonym germinal neuroepithelium WARN duplicate_label_synonym biliary ductule has exact synonym biliary ductule -WARN duplicate_label_synonym biliary ductule has_related_synonym biliary ductule WARN duplicate_label_synonym primary heart field has exact synonym primary heart field WARN duplicate_label_synonym cardiac vein has exact synonym cardiac vein WARN duplicate_label_synonym internal genitalia has exact synonym internal genitalia WARN duplicate_label_synonym external genitalia has exact synonym external genitalia WARN duplicate_label_synonym paired limb/fin bud has exact synonym paired limb/fin bud WARN duplicate_label_synonym pharyngeal arch artery has exact synonym pharyngeal arch artery -WARN duplicate_label_synonym pharyngeal arch artery has_related_synonym pharyngeal arch artery WARN duplicate_label_synonym anterior limiting lamina of cornea has exact synonym anterior limiting lamina of cornea WARN duplicate_label_synonym raphe nuclei has exact synonym raphe nuclei WARN duplicate_label_synonym pelvic appendage has exact synonym pelvic appendage @@ -854,18 +874,13 @@ WARN duplicate_label_synonym parenchyma of central nervous system has exact syno WARN duplicate_label_synonym cervical region has exact synonym cervical region WARN duplicate_label_synonym primitive heart tube has exact synonym primitive heart tube WARN duplicate_label_synonym paired limb/fin field has exact synonym paired limb/fin field -WARN duplicate_label_synonym muscular coat has_related_synonym muscular coat -WARN duplicate_label_synonym vertebral canal has_related_synonym vertebral canal WARN duplicate_label_synonym head mesenchyme from mesoderm has exact synonym head mesenchyme from mesoderm WARN duplicate_label_synonym lumen of digestive tract has exact synonym lumen of digestive tract WARN duplicate_label_synonym ovary stroma has exact synonym ovary stroma WARN duplicate_label_synonym pancreatic lobule has exact synonym pancreatic lobule WARN duplicate_label_synonym anatomical junction has exact synonym anatomical junction WARN duplicate_label_synonym pelvic girdle skeleton has exact synonym pelvic girdle skeleton -WARN duplicate_label_synonym perichordal bone has_related_synonym perichordal bone -WARN duplicate_label_synonym tail vasculature has_related_synonym tail vasculature WARN duplicate_label_synonym ciliary processes has exact synonym ciliary processes -WARN duplicate_label_synonym palatoquadrate arch has_related_synonym palatoquadrate arch WARN duplicate_label_synonym facial skeleton has exact synonym facial skeleton WARN duplicate_label_synonym hematopoietic tissue has exact synonym hematopoietic tissue WARN duplicate_label_synonym foramen of skull has exact synonym foramen of skull @@ -881,1451 +896,10 @@ WARN duplicate_label_synonym left crus of diaphragm has exact synonym left crus WARN duplicate_label_synonym anal canal epithelium has exact synonym anal canal epithelium WARN duplicate_label_synonym abdominal viscera has exact synonym abdominal viscera WARN duplicate_label_synonym lung field has exact synonym lung field -WARN missing_definition has atomic number textual definition -WARN missing_definition fiat object part textual definition -WARN missing_definition site textual definition -WARN missing_definition object textual definition -WARN missing_definition has participant textual definition -WARN missing_definition immaterial entity textual definition -WARN missing_definition carbamate textual definition -WARN missing_definition electron donor textual definition -WARN missing_definition water textual definition -WARN missing_definition dioxygen textual definition -WARN missing_definition carbon dioxide textual definition -WARN missing_definition noradrenaline(1+) textual definition -WARN missing_definition dinitrogen textual definition -WARN missing_definition manganese atom textual definition -WARN missing_definition 5beta-cholane textual definition -WARN missing_definition alkaline earth metal atom textual definition -WARN missing_definition alkali metal atom textual definition -WARN missing_definition aminoglycan textual definition -WARN missing_definition benzopyrrole textual definition -WARN missing_definition bromine atom textual definition -WARN missing_definition cadmium atom textual definition -WARN missing_definition calcium atom textual definition -WARN missing_definition carbon oxide textual definition -WARN missing_definition carbonyl group textual definition -WARN missing_definition chloride salt textual definition -WARN missing_definition chlorine atom textual definition -WARN missing_definition chlorine molecular entity textual definition -WARN missing_definition cyclic peptide textual definition -WARN missing_definition monoatomic cation textual definition -WARN missing_definition fluorine atom textual definition -WARN missing_definition glycogens textual definition -WARN missing_definition halogen molecular entity textual definition -WARN missing_definition halogen textual definition -WARN missing_definition inorganic anion textual definition -WARN missing_definition inorganic oxide textual definition -WARN missing_definition inorganic salt textual definition -WARN missing_definition monoatomic ion textual definition -WARN missing_definition organic salt textual definition -WARN missing_definition iron molecular entity textual definition -WARN missing_definition lead atom textual definition -WARN missing_definition linear tetrapyrrole textual definition -WARN missing_definition magnesium atom textual definition -WARN missing_definition mercury atom textual definition -WARN missing_definition metal cation textual definition -WARN missing_definition monoatomic monocation textual definition -WARN missing_definition nitrogen atom textual definition -WARN missing_definition nonmetal atom textual definition -WARN missing_definition organic ion textual definition -WARN missing_definition organic oxide textual definition -WARN missing_definition oxygen atom textual definition -WARN missing_definition oxygen molecular entity textual definition -WARN missing_definition phosphoric acid derivative textual definition -WARN missing_definition phosphorus molecular entity textual definition -WARN missing_definition potassium atom textual definition -WARN missing_definition sodium atom textual definition -WARN missing_definition sodium chloride textual definition -WARN missing_definition sodium molecular entity textual definition -WARN missing_definition sulfur atom textual definition -WARN missing_definition sulfur molecular entity textual definition -WARN missing_definition tin atom textual definition -WARN missing_definition organic heterobicyclic compound textual definition -WARN missing_definition uranium atom textual definition -WARN missing_definition zinc atom textual definition -WARN missing_definition boron atom textual definition -WARN missing_definition arsenic atom textual definition -WARN missing_definition selenium atom textual definition -WARN missing_definition silicon atom textual definition -WARN missing_definition carbon atom textual definition -WARN missing_definition vanadium atom textual definition -WARN missing_definition tungsten textual definition -WARN missing_definition phosphorus atom textual definition -WARN missing_definition molybdenum atom textual definition -WARN missing_definition copper atom textual definition -WARN missing_definition carbonic acid textual definition -WARN missing_definition aluminium atom textual definition -WARN missing_definition gold atom textual definition -WARN missing_definition azanide textual definition -WARN missing_definition hydridodioxygen(1+) textual definition -WARN missing_definition lithium atom textual definition -WARN missing_definition helium atom textual definition -WARN missing_definition monoatomic dication textual definition -WARN missing_definition astatine atom textual definition -WARN missing_definition germanium atom textual definition -WARN missing_definition tellurium atom textual definition -WARN missing_definition silver atom textual definition -WARN missing_definition antimony atom textual definition -WARN missing_definition caesium atom textual definition -WARN missing_definition ruthenium atom textual definition -WARN missing_definition osmium atom textual definition -WARN missing_definition barium atom textual definition -WARN missing_definition europium atom textual definition -WARN missing_definition oxoacid derivative textual definition -WARN missing_definition inorganic hydride textual definition -WARN missing_definition monoatomic hydrogen textual definition -WARN missing_definition elemental hydrogen textual definition -WARN missing_definition elemental oxygen textual definition -WARN missing_definition diatomic oxygen textual definition -WARN missing_definition diatomic nitrogen textual definition -WARN missing_definition elemental nitrogen textual definition -WARN missing_definition molecular messenger textual definition -WARN missing_definition fuel textual definition -WARN missing_definition bismuth atom textual definition -WARN missing_definition carbon group element atom textual definition -WARN missing_definition noble gas atom textual definition -WARN missing_definition neon atom textual definition -WARN missing_definition radon atom textual definition -WARN missing_definition monoatomic helium textual definition -WARN missing_definition helium(2+) textual definition -WARN missing_definition boron group element atom textual definition -WARN missing_definition lanthanoid atom textual definition -WARN missing_definition actinoid atom textual definition -WARN missing_definition rare earth metal atom textual definition -WARN missing_definition rubidium atom textual definition -WARN missing_definition francium atom textual definition -WARN missing_definition strontium atom textual definition -WARN missing_definition radium atom textual definition -WARN missing_definition scandium atom textual definition -WARN missing_definition yttrium atom textual definition -WARN missing_definition scandium group element atom textual definition -WARN missing_definition lanthanum atom textual definition -WARN missing_definition actinium atom textual definition -WARN missing_definition zinc group element atom textual definition -WARN missing_definition titanium atom textual definition -WARN missing_definition zirconium atom textual definition -WARN missing_definition hafnium atom textual definition -WARN missing_definition niobium atom textual definition -WARN missing_definition titanium group element atom textual definition -WARN missing_definition rutherfordium atom textual definition -WARN missing_definition vanadium group element atom textual definition -WARN missing_definition tantalum atom textual definition -WARN missing_definition dubnium atom textual definition -WARN missing_definition chromium group element atom textual definition -WARN missing_definition seaborgium atom textual definition -WARN missing_definition manganese group element atom textual definition -WARN missing_definition technetium atom textual definition -WARN missing_definition bohrium atom textual definition -WARN missing_definition iron group element atom textual definition -WARN missing_definition hassium atom textual definition -WARN missing_definition cobalt group element atom textual definition -WARN missing_definition meitnerium atom textual definition -WARN missing_definition nickel group element atom textual definition -WARN missing_definition platinum textual definition -WARN missing_definition platinum group metal atom textual definition -WARN missing_definition copper group element atom textual definition -WARN missing_definition darmstadtium textual definition -WARN missing_definition cerium textual definition -WARN missing_definition technetium-99 textual definition -WARN missing_definition neodymium atom textual definition -WARN missing_definition promethium atom textual definition -WARN missing_definition samarium atom textual definition -WARN missing_definition gadolinium atom textual definition -WARN missing_definition terbium atom textual definition -WARN missing_definition dysprosium atom textual definition -WARN missing_definition erbium textual definition -WARN missing_definition thulium atom textual definition -WARN missing_definition ytterbium textual definition -WARN missing_definition lutetium atom textual definition -WARN missing_definition thorium textual definition -WARN missing_definition protactinium atom textual definition -WARN missing_definition neptunium atom textual definition -WARN missing_definition plutonium atom textual definition -WARN missing_definition americium atom textual definition -WARN missing_definition curium atom textual definition -WARN missing_definition berkelium atom textual definition -WARN missing_definition californium atom textual definition -WARN missing_definition einsteinium atom textual definition -WARN missing_definition fermium textual definition -WARN missing_definition mendelevium atom textual definition -WARN missing_definition nobelium textual definition -WARN missing_definition lawrencium atom textual definition -WARN missing_definition sulfur oxoacid textual definition -WARN missing_definition pnictogen oxoacid textual definition -WARN missing_definition sulfur oxoacid derivative textual definition -WARN missing_definition pnictogen oxoanion textual definition -WARN missing_definition phosphorus oxoanion textual definition -WARN missing_definition elemental pnictogen textual definition -WARN missing_definition sulfur oxoanion textual definition -WARN missing_definition chalcogen oxoacid textual definition -WARN missing_definition chalcogen oxoanion textual definition -WARN missing_definition radon-220 atom textual definition -WARN missing_definition radon-222 atom textual definition -WARN missing_definition radon-219 atom textual definition -WARN missing_definition actinoid molecular entity textual definition -WARN missing_definition uranium molecular entity textual definition -WARN missing_definition alkali metal cation textual definition -WARN missing_definition s-block element atom textual definition -WARN missing_definition d-block element atom textual definition -WARN missing_definition f-block element atom textual definition -WARN missing_definition benzenediols textual definition -WARN missing_definition carbon group molecular entity textual definition -WARN missing_definition hydrogen molecular entity textual definition -WARN missing_definition polycyclic compound textual definition -WARN missing_definition organic aromatic compound textual definition -WARN missing_definition f-block molecular entity textual definition -WARN missing_definition helium molecular entity textual definition -WARN missing_definition elemental helium textual definition -WARN missing_definition oxygen hydride textual definition -WARN missing_definition information biomacromolecule textual definition -WARN missing_definition proteinogenic amino-acid residue textual definition -WARN missing_definition carbohydrate acid textual definition -WARN missing_definition carbohydrate acid anion textual definition -WARN missing_definition iron group molecular entity textual definition -WARN missing_definition copper group molecular entity textual definition -WARN missing_definition nickel group molecular entity textual definition -WARN missing_definition platinum molecular entity textual definition -WARN missing_definition canonical nucleoside residue textual definition -WARN missing_definition canonical ribonucleoside residue textual definition -WARN missing_definition canonical deoxyribonucleoside residue textual definition -WARN missing_definition halide salt textual definition -WARN missing_definition gold molecular entity textual definition -WARN missing_definition nitrogen hydride textual definition -WARN missing_definition fossil fuel textual definition -WARN missing_definition hydroxy steroid textual definition -WARN missing_definition alkali metal salt textual definition -WARN missing_definition natural product fundamental parent textual definition -WARN missing_definition steroid fundamental parent textual definition -WARN missing_definition cholane textual definition -WARN missing_definition carbon oxoacid textual definition -WARN missing_definition dicarboxylic acid anion textual definition -WARN missing_definition sulfated glycosaminoglycan textual definition -WARN missing_definition carbohydrate sulfate textual definition -WARN missing_definition pnictogen hydride textual definition -WARN missing_definition cholanoid textual definition -WARN missing_definition inorganic chloride textual definition -WARN missing_definition bile acid anion textual definition -WARN missing_definition 5beta-cholanic acid textual definition -WARN missing_definition cholanic acids textual definition -WARN missing_definition phosphorus oxoacid derivative textual definition -WARN missing_definition phosphorus oxoacids and derivatives textual definition -WARN missing_definition chalcogen hydride textual definition -WARN missing_definition argon molecular entity textual definition -WARN missing_definition inorganic ion textual definition -WARN missing_definition inorganic cation textual definition -WARN missing_definition carbon-14 atom textual definition -WARN missing_definition carbon-13 atom textual definition -WARN missing_definition carbon-11 atom textual definition -WARN missing_definition carbon-10 atom textual definition -WARN missing_definition carbon-12 atom textual definition -WARN missing_definition oxygen-19 atom textual definition -WARN missing_definition nitrogen-16 atom textual definition -WARN missing_definition nitrogen-17 atom textual definition -WARN missing_definition chalcocarbonic acid textual definition -WARN missing_definition amino-acid anion textual definition -WARN missing_definition organic hydride textual definition -WARN missing_definition mononuclear parent hydride textual definition -WARN missing_definition elemental sodium textual definition -WARN missing_definition polonium-190 atom textual definition -WARN missing_definition polonium-191 atom textual definition -WARN missing_definition polonium-192 atom textual definition -WARN missing_definition polonium-193 atom textual definition -WARN missing_definition polonium-194 atom textual definition -WARN missing_definition polonium-195 atom textual definition -WARN missing_definition polonium-196 atom textual definition -WARN missing_definition polonium-197 atom textual definition -WARN missing_definition polonium-198 atom textual definition -WARN missing_definition polonium-199 atom textual definition -WARN missing_definition polonium-200 atom textual definition -WARN missing_definition polonium-201 atom textual definition -WARN missing_definition polonium-202 atom textual definition -WARN missing_definition polonium-204 atom textual definition -WARN missing_definition halide textual definition -WARN missing_definition sulfuric acid derivative textual definition -WARN missing_definition organic heteropolycyclic compound textual definition -WARN missing_definition polycyclic heteroarene textual definition -WARN missing_definition aminoalkylindole textual definition -WARN missing_definition organic sodium salt textual definition -WARN missing_definition inorganic sodium salt textual definition -WARN missing_definition carbonate textual definition -WARN missing_definition hydroxy group textual definition -WARN missing_definition hydrogensulfate textual definition -WARN missing_definition oxo group textual definition -WARN missing_definition carboxy group textual definition -WARN missing_definition sulfur oxide textual definition -WARN missing_definition argon atom textual definition -WARN missing_definition hydrogen atom textual definition -WARN missing_definition holmium atom textual definition -WARN missing_definition iridium atom textual definition -WARN missing_definition krypton atom textual definition -WARN missing_definition praseodymium atom textual definition -WARN missing_definition rhenium atom textual definition -WARN missing_definition xenon atom textual definition -WARN missing_definition canonical nucleotide residue textual definition -WARN missing_definition canonical deoxyribonucleotide residue textual definition -WARN missing_definition canonical ribonucleotide residue textual definition -WARN missing_definition onium compound textual definition -WARN missing_definition nucleotide residue textual definition -WARN missing_definition nucleoside residue textual definition -WARN missing_definition nitrogen molecular entity textual definition -WARN missing_definition organic divalent group textual definition -WARN missing_definition organic univalent group textual definition -WARN missing_definition organic polycyclic compound textual definition -WARN missing_definition physiological role textual definition -WARN missing_definition inorganic hydroxy compound textual definition -WARN missing_definition greenhouse gas textual definition -WARN missing_definition environmental contaminant textual definition -WARN missing_definition neuronal receptor cell textual definition -WARN missing_definition neural crest derived neuron textual definition -WARN missing_definition branched duct epithelial cell textual definition -WARN missing_definition squamous epithelial cell textual definition -WARN missing_definition neuron associated cell textual definition -WARN missing_definition CNS neuron (sensu Vertebrata) textual definition -WARN missing_definition visual pigment cell textual definition -WARN missing_definition protein secreting cell textual definition -WARN missing_definition seromucus secreting cell textual definition -WARN missing_definition peptide hormone secreting cell textual definition -WARN missing_definition insulin secreting cell textual definition -WARN missing_definition somatostatin secreting cell textual definition -WARN missing_definition steroid hormone secreting cell textual definition -WARN missing_definition binucleate cell textual definition -WARN missing_definition eukaryotic cell textual definition -WARN missing_definition Eumycetozoan cell textual definition -WARN missing_definition eye photoreceptor cell textual definition -WARN missing_definition crystallin accumulating cell textual definition -WARN missing_definition mucus secreting cell textual definition -WARN missing_definition extracellular matrix secreting cell textual definition -WARN missing_definition oxygen accumulating cell textual definition -WARN missing_definition extraembryonic cell textual definition -WARN missing_definition ganglion interneuron textual definition -WARN missing_definition endopolyploid cell textual definition -WARN missing_definition carbohydrate secreting cell textual definition -WARN missing_definition biogenic amine secreting cell textual definition -WARN missing_definition fungal cell textual definition -WARN missing_definition fibroblast of dermis textual definition -WARN missing_definition epithelial cell of lower respiratory tract textual definition -WARN missing_definition visual system neuron textual definition -WARN missing_definition microcirculation associated smooth muscle cell textual definition -WARN missing_definition cardiac blood vessel endothelial cell textual definition -WARN missing_definition His-Purkinje system cell textual definition -WARN missing_definition cardiac endothelial cell textual definition -WARN missing_definition camera-type eye photoreceptor cell textual definition -WARN missing_definition cardiac glial cell textual definition -WARN missing_definition cardiac myoblast textual definition -WARN missing_definition stomach neuroendocrine cell textual definition -WARN missing_definition lung ciliated cell textual definition -WARN missing_definition lung secretory cell textual definition -WARN missing_definition trophectodermal cell textual definition -WARN missing_definition lung endothelial cell textual definition -WARN missing_definition pulmonary artery endothelial cell textual definition -WARN missing_definition lacks_part textual definition -WARN missing_definition lacks_plasma_membrane_part textual definition -WARN missing_definition action specification textual definition -WARN missing_definition concretizes textual definition -WARN missing_definition intended to realize textual definition -WARN missing_definition realizes textual definition -WARN missing_definition information representation textual definition -WARN missing_definition physical information carrier textual definition -WARN missing_definition has number of atomic nuclei textual definition -WARN missing_definition atherosclerosis textual definition -WARN missing_definition iris disease textual definition -WARN missing_definition liver disease textual definition -WARN missing_definition bone marrow disease textual definition -WARN missing_definition cornea cancer textual definition -WARN missing_definition grain of desert sand textual definition -WARN missing_definition wood textual definition -WARN missing_definition platinum mine textual definition -WARN missing_definition gold mine textual definition -WARN missing_definition coal mine textual definition -WARN missing_definition contaminated water textual definition -WARN missing_definition coal mine waste material textual definition -WARN missing_definition temperate grassland biome textual definition -WARN missing_definition litter layer textual definition -WARN missing_definition human house textual definition -WARN missing_definition swamp forest textual definition -WARN missing_definition needleleaf forest textual definition -WARN missing_definition sclerophyllous forest textual definition -WARN missing_definition montane forest textual definition -WARN missing_definition ceiling textual definition -WARN missing_definition atmospheric wind textual definition -WARN missing_definition water raindrop textual definition -WARN missing_definition algal material textual definition -WARN missing_definition forest canopy textual definition -WARN missing_definition gill tissue material textual definition -WARN missing_definition aquatic ecosystem textual definition -WARN missing_definition marine ecosystem textual definition -WARN missing_definition terrestrial ecosystem textual definition -WARN missing_definition temperate grassland textual definition -WARN missing_definition iron mine textual definition -WARN missing_definition uranium mine textual definition -WARN missing_definition iron ore textual definition -WARN missing_definition gold ore textual definition -WARN missing_definition platinum ore textual definition -WARN missing_definition cement dust textual definition -WARN missing_definition dust from plant parts textual definition -WARN missing_definition forest process textual definition -WARN missing_definition forest area expansion textual definition -WARN missing_definition generation of energy from coal textual definition -WARN missing_definition stellar radiation energy textual definition -WARN missing_definition coal power plant textual definition -WARN missing_definition solar power station textual definition -WARN missing_definition ocean thermal power station textual definition -WARN missing_definition tidal power plant textual definition -WARN missing_definition integumental system environment textual definition -WARN missing_definition results in distribution of textual definition -WARN missing_definition results in fission of textual definition -WARN missing_definition hasAncestryStatus textual definition -WARN missing_definition has measurement value textual definition -WARN missing_definition has measurement unit label textual definition -WARN missing_definition jaw movement textual definition -WARN missing_definition root textual definition -WARN missing_definition Cricetinae textual definition -WARN missing_definition Mesocricetus textual definition -WARN missing_definition Muridae textual definition -WARN missing_definition Mus caroli textual definition -WARN missing_definition Mus musculus textual definition -WARN missing_definition Mus spretus textual definition -WARN missing_definition Rattus textual definition -WARN missing_definition Viruses textual definition -WARN missing_definition Obtectomera textual definition -WARN missing_definition Lumbricinae textual definition -WARN missing_definition Lumbricus terrestris complex textual definition -WARN missing_definition Lumbricus rubellus complex textual definition -WARN missing_definition Sedentaria textual definition -WARN missing_definition Canalipalpata textual definition -WARN missing_definition Xenoturbellida textual definition -WARN missing_definition Xenoturbella textual definition -WARN missing_definition Sarsostraca textual definition -WARN missing_definition Phyllopoda textual definition -WARN missing_definition Anomopoda textual definition -WARN missing_definition Eubrachyura textual definition -WARN missing_definition Heterotremata textual definition -WARN missing_definition Myxini textual definition -WARN missing_definition Teleostomi textual definition -WARN missing_definition Euteleostomi textual definition -WARN missing_definition Chromadorea textual definition -WARN missing_definition Ecdysozoa textual definition -WARN missing_definition Lophotrochozoa textual definition -WARN missing_definition Neoteleostei textual definition -WARN missing_definition Eurypterygia textual definition -WARN missing_definition Ctenosquamata textual definition -WARN missing_definition Acanthomorphata textual definition -WARN missing_definition Euacanthomorphacea textual definition -WARN missing_definition Acipenserinae textual definition -WARN missing_definition Acipenserini textual definition -WARN missing_definition Zygnemophyceae textual definition -WARN missing_definition Streptophytina textual definition -WARN missing_definition Xenacoelomorpha textual definition -WARN missing_definition cellular organisms textual definition -WARN missing_definition Archelosauria textual definition -WARN missing_definition Dipnotetrapodomorpha textual definition -WARN missing_definition Eumycetozoa textual definition -WARN missing_definition Boreoeutheria textual definition -WARN missing_definition Acrogymnospermae textual definition -WARN missing_definition Mesangiospermae textual definition -WARN missing_definition Petrosaviidae textual definition -WARN missing_definition Gnetidae textual definition -WARN missing_definition Pinales textual definition -WARN missing_definition Acoelomorpha textual definition -WARN missing_definition Saccharomycotina textual definition -WARN missing_definition Schizosaccharomycetes textual definition -WARN missing_definition Cyclostomata textual definition -WARN missing_definition Osteoglossocephalai textual definition -WARN missing_definition Euteleosteomorpha textual definition -WARN missing_definition Percomorphaceae textual definition -WARN missing_definition Carangaria textual definition -WARN missing_definition Eupercaria textual definition -WARN missing_definition Xenoturbellidae textual definition -WARN missing_definition Galloanserae textual definition -WARN missing_definition Eisenia andrei textual definition -WARN missing_definition Acipenseroidei textual definition -WARN missing_definition Actinopteri textual definition -WARN missing_definition Clupeocephala textual definition -WARN missing_definition Otophysi textual definition -WARN missing_definition Cypriniphysae textual definition -WARN missing_definition Otomorpha textual definition -WARN missing_definition Myomorpha textual definition -WARN missing_definition Enchytraeida textual definition -WARN missing_definition Pancrustacea textual definition -WARN missing_definition Mandibulata textual definition -WARN missing_definition Bacteria textual definition -WARN missing_definition Dictyosteliaceae textual definition -WARN missing_definition Dictyosteliales textual definition -WARN missing_definition Homininae textual definition -WARN missing_definition Archaea textual definition -WARN missing_definition Multicrustacea textual definition -WARN missing_definition Hirudinida textual definition -WARN missing_definition Rhabditina textual definition -WARN missing_definition Rhabditomorpha textual definition -WARN missing_definition Evosea textual definition -WARN missing_definition Discoba textual definition -WARN missing_definition Xenopus textual definition -WARN missing_definition Zygnematophycidae textual definition -WARN missing_definition Ochrophyta textual definition -WARN missing_definition Spiralia textual definition -WARN missing_definition Sar textual definition -WARN missing_definition Danionidae textual definition -WARN missing_definition Danioninae textual definition -WARN missing_definition Eukaryota textual definition -WARN missing_definition Bovinae textual definition -WARN missing_definition Crassiclitellata textual definition -WARN missing_definition Conifers I textual definition -WARN missing_definition Phaeophyceae textual definition -WARN missing_definition Oryzomys textual definition -WARN missing_definition Cancroidea textual definition -WARN missing_definition Pipoidea textual definition -WARN missing_definition Ranoidea textual definition -WARN missing_definition Anthophila textual definition -WARN missing_definition Cyprinoidei textual definition -WARN missing_definition Pleuronectoidei textual definition -WARN missing_definition Tetraodontiformes textual definition -WARN missing_definition Tetraodontoidei textual definition -WARN missing_definition Tetraodontidae textual definition -WARN missing_definition Takifugu textual definition -WARN missing_definition Takifugu rubripes textual definition -WARN missing_definition Laurasiatheria textual definition -WARN missing_definition Euarchontoglires textual definition -WARN missing_definition Glires textual definition -WARN missing_definition Simiiformes textual definition -WARN missing_definition Cercopithecoidea textual definition -WARN missing_definition Hominoidea textual definition -WARN missing_definition Zygnematales textual definition -WARN missing_definition Embryophyta textual definition -WARN missing_definition Bryophyta textual definition -WARN missing_definition Sophophora textual definition -WARN missing_definition melanogaster group textual definition -WARN missing_definition melanogaster subgroup textual definition -WARN missing_definition Chondrostei textual definition -WARN missing_definition Teleostei textual definition -WARN missing_definition Tetradontoidea textual definition -WARN missing_definition Ostariophysi textual definition -WARN missing_definition Tetrapoda textual definition -WARN missing_definition Amniota textual definition -WARN missing_definition Theria textual definition -WARN missing_definition Sauria textual definition -WARN missing_definition Dictyostelia textual definition -WARN missing_definition Viridiplantae textual definition -WARN missing_definition Coniferophyta textual definition -WARN missing_definition Pinidae textual definition -WARN missing_definition Opisthokonta textual definition -WARN missing_definition Pinaceae textual definition -WARN missing_definition Metazoa textual definition -WARN missing_definition Bilateria textual definition -WARN missing_definition Protostomia textual definition -WARN missing_definition Neoptera textual definition -WARN missing_definition Endopterygota textual definition -WARN missing_definition Deuterostomia textual definition -WARN missing_definition Carnivora textual definition -WARN missing_definition Alveolata textual definition -WARN missing_definition Stramenopiles textual definition -WARN missing_definition Euglenozoa textual definition -WARN missing_definition Gnetopsida textual definition -WARN missing_definition Cricetidae textual definition -WARN missing_definition Muroidea textual definition -WARN missing_definition Gnetales textual definition -WARN missing_definition Felinae textual definition -WARN missing_definition Magnoliopsida textual definition -WARN missing_definition Schizosaccharomycetales textual definition -WARN missing_definition Apoidea textual definition -WARN missing_definition Streptophyta textual definition -WARN missing_definition Suina textual definition -WARN missing_definition Pecora textual definition -WARN missing_definition Ditrysia textual definition -WARN missing_definition Papilionoidea textual definition -WARN missing_definition Haplorrhini textual definition -WARN missing_definition Feliformia textual definition -WARN missing_definition Caniformia textual definition -WARN missing_definition Artemiidae textual definition -WARN missing_definition Glaucocystophyceae textual definition -WARN missing_definition Poales textual definition -WARN missing_definition Murinae textual definition -WARN missing_definition Sigmodontinae textual definition -WARN missing_definition Mammalia textual definition -WARN missing_definition Glossata textual definition -WARN missing_definition Neolepidoptera textual definition -WARN missing_definition Heteroneura textual definition -WARN missing_definition Siboglinidae textual definition -WARN missing_definition Neopterygii textual definition -WARN missing_definition Batrachia textual definition -WARN missing_definition Protacanthopterygii textual definition -WARN missing_definition Clitellata textual definition -WARN missing_definition Dinosauria textual definition -WARN missing_definition Saurischia textual definition -WARN missing_definition Theropoda textual definition -WARN missing_definition Coelurosauria textual definition -WARN missing_definition Muscomorpha textual definition -WARN missing_definition Schizophora textual definition -WARN missing_definition Acalyptratae textual definition -WARN missing_definition Ephydroidea textual definition -WARN missing_definition Drosophilinae textual definition -WARN missing_definition Liliopsida textual definition -WARN missing_definition Poaceae textual definition -WARN missing_definition Dikarya textual definition -WARN missing_definition Taphrinomycotina textual definition -WARN missing_definition Drosophilini textual definition -WARN missing_definition commelinids textual definition -WARN missing_definition Fungi textual definition -WARN missing_definition Cyclorrhapha textual definition -WARN missing_definition Eremoneura textual definition -WARN missing_definition Ascomycota textual definition -WARN missing_definition Saccharomycetes textual definition -WARN missing_definition Saccharomycetales textual definition -WARN missing_definition Saccharomycetaceae textual definition -WARN missing_definition Schizosaccharomycetaceae textual definition -WARN missing_definition Schizosaccharomyces textual definition -WARN missing_definition Schizosaccharomyces pombe textual definition -WARN missing_definition Saccharomyces textual definition -WARN missing_definition Saccharomyces cerevisiae textual definition -WARN missing_definition Salmoninae textual definition -WARN missing_definition Insecta textual definition -WARN missing_definition Amoebozoa textual definition -WARN missing_definition Hirudinea textual definition -WARN missing_definition Rhabditoidea textual definition -WARN missing_definition Peloderinae textual definition -WARN missing_definition PX clade textual definition -WARN missing_definition Dictyostelium textual definition -WARN missing_definition Pinopsida textual definition -WARN missing_definition Tracheophyta textual definition -WARN missing_definition Spermatophyta textual definition -WARN missing_definition Porifera textual definition -WARN missing_definition Eumetazoa textual definition -WARN missing_definition Cnidaria textual definition -WARN missing_definition Platyhelminthes textual definition -WARN missing_definition Nematoda textual definition -WARN missing_definition Rhabditida textual definition -WARN missing_definition Caenorhabditis textual definition -WARN missing_definition Caenorhabditis elegans textual definition -WARN missing_definition Rhabditidae textual definition -WARN missing_definition Annelida textual definition -WARN missing_definition Polychaeta textual definition -WARN missing_definition Sabellida textual definition -WARN missing_definition Oligochaeta textual definition -WARN missing_definition Enchytraeidae textual definition -WARN missing_definition Enchytraeus textual definition -WARN missing_definition Lumbricina textual definition -WARN missing_definition Lumbricidae textual definition -WARN missing_definition Eisenia textual definition -WARN missing_definition Eisenia fetida textual definition -WARN missing_definition Lumbricus textual definition -WARN missing_definition Lumbricus terrestris textual definition -WARN missing_definition Hirudiniformes textual definition -WARN missing_definition Hirudinidae textual definition -WARN missing_definition Mollusca textual definition -WARN missing_definition Arthropoda textual definition -WARN missing_definition Crustacea textual definition -WARN missing_definition Branchiopoda textual definition -WARN missing_definition Anostraca textual definition -WARN missing_definition Artemia textual definition -WARN missing_definition Cladocera textual definition -WARN missing_definition Daphnia textual definition -WARN missing_definition Malacostraca textual definition -WARN missing_definition Eucarida textual definition -WARN missing_definition Decapoda textual definition -WARN missing_definition Pleocyemata textual definition -WARN missing_definition Brachyura textual definition -WARN missing_definition Cancridae textual definition -WARN missing_definition Hexapoda textual definition -WARN missing_definition Lepidoptera textual definition -WARN missing_definition Diptera textual definition -WARN missing_definition saccharomyceta textual definition -WARN missing_definition Brachycera textual definition -WARN missing_definition Eumalacostraca textual definition -WARN missing_definition Drosophilidae textual definition -WARN missing_definition Drosophila textual definition -WARN missing_definition Drosophila melanogaster textual definition -WARN missing_definition Hymenoptera textual definition -WARN missing_definition Apocrita textual definition -WARN missing_definition Aculeata textual definition -WARN missing_definition Apidae textual definition -WARN missing_definition Pterygota textual definition -WARN missing_definition Chordata textual definition -WARN missing_definition Tunicata textual definition -WARN missing_definition Vertebrata textual definition -WARN missing_definition Myxiniformes textual definition -WARN missing_definition Myxinidae textual definition -WARN missing_definition Daphniidae textual definition -WARN missing_definition Gnathostomata textual definition -WARN missing_definition Chondrichthyes textual definition -WARN missing_definition Euphyllophyta textual definition -WARN missing_definition Holocephali textual definition -WARN missing_definition Chimaeriformes textual definition -WARN missing_definition Dipnomorpha textual definition -WARN missing_definition Actinopterygii textual definition -WARN missing_definition Acipenseriformes textual definition -WARN missing_definition Acipenseridae textual definition -WARN missing_definition Acipenser textual definition -WARN missing_definition Cypriniformes textual definition -WARN missing_definition Danio textual definition -WARN missing_definition Danio rerio textual definition -WARN missing_definition Salmoniformes textual definition -WARN missing_definition Salmonidae textual definition -WARN missing_definition Oncorhynchus textual definition -WARN missing_definition Salmo textual definition -WARN missing_definition Pleuronectiformes textual definition -WARN missing_definition Pleuronectidae textual definition -WARN missing_definition Sarcopterygii textual definition -WARN missing_definition Amphibia textual definition -WARN missing_definition Anura textual definition -WARN missing_definition Pipidae textual definition -WARN missing_definition Xenopus textual definition -WARN missing_definition Xenopus laevis textual definition -WARN missing_definition Xenopodinae textual definition -WARN missing_definition Ranidae textual definition -WARN missing_definition Neobatrachia textual definition -WARN missing_definition Diplostraca textual definition -WARN missing_definition Sauropsida textual definition -WARN missing_definition Archosauria textual definition -WARN missing_definition Dicondylia textual definition -WARN missing_definition Artemia salina textual definition -WARN missing_definition Amphiesmenoptera textual definition -WARN missing_definition Mus textual definition -WARN missing_definition Aves textual definition -WARN missing_definition Palaeognathae textual definition -WARN missing_definition Struthioniformes textual definition -WARN missing_definition Struthionidae textual definition -WARN missing_definition Struthio textual definition -WARN missing_definition Struthio camelus textual definition -WARN missing_definition Neognathae textual definition -WARN missing_definition Anseriformes textual definition -WARN missing_definition Anatidae textual definition -WARN missing_definition Panarthropoda textual definition -WARN missing_definition Columbiformes textual definition -WARN missing_definition Columbidae textual definition -WARN missing_definition Craniata textual definition -WARN missing_definition Galliformes textual definition -WARN missing_definition Phasianidae textual definition -WARN missing_definition Gallus textual definition -WARN missing_definition Gallus gallus textual definition -WARN missing_definition Phasianinae textual definition -WARN missing_definition Enchytraeus crypticus textual definition -WARN missing_definition Artiodactyla textual definition -WARN missing_definition Prototheria textual definition -WARN missing_definition Monotremata textual definition -WARN missing_definition Tachyglossidae textual definition -WARN missing_definition Eutheria textual definition -WARN missing_definition Primates textual definition -WARN missing_definition Platyrrhini textual definition -WARN missing_definition Catarrhini textual definition -WARN missing_definition Cercopithecidae textual definition -WARN missing_definition Cercopithecinae textual definition -WARN missing_definition Macaca textual definition -WARN missing_definition Macaca mulatta textual definition -WARN missing_definition Hominidae textual definition -WARN missing_definition Homo textual definition -WARN missing_definition Homo sapiens textual definition -WARN missing_definition Canidae textual definition -WARN missing_definition Canis textual definition -WARN missing_definition Vulpes textual definition -WARN missing_definition Felidae textual definition -WARN missing_definition Felis textual definition -WARN missing_definition Felis catus textual definition -WARN missing_definition Suidae textual definition -WARN missing_definition Sus textual definition -WARN missing_definition Ruminantia textual definition -WARN missing_definition Cervidae textual definition -WARN missing_definition Rangifer textual definition -WARN missing_definition Odocoileinae textual definition -WARN missing_definition Bovidae textual definition -WARN missing_definition Bos textual definition -WARN missing_definition Bos taurus textual definition -WARN missing_definition Ovis textual definition -WARN missing_definition Ovis aries textual definition -WARN missing_definition Caprinae textual definition -WARN missing_definition Lagomorpha textual definition -WARN missing_definition Rodentia textual definition -WARN missing_definition plan textual definition -WARN missing_definition qualitative textual definition -WARN missing_definition physical quality of a process textual definition -WARN missing_definition sloped downward textual definition -WARN missing_definition astronaut textual definition -WARN missing_definition military textual definition -WARN missing_definition medical professional textual definition -WARN missing_definition dentist textual definition -WARN missing_definition radiologist textual definition -WARN missing_definition risk estimate textual definition -WARN missing_definition lifetime risk estimate textual definition -WARN missing_definition biological process textual definition -WARN missing_definition cellular process textual definition -WARN missing_definition track formation textual definition -WARN missing_definition mass number textual definition -WARN missing_definition contained in textual definition -WARN missing_definition contains textual definition -WARN missing_definition innervated_by textual definition -WARN missing_definition has component activity textual definition -WARN missing_definition directly regulated by textual definition -WARN missing_definition before or simultaneous with textual definition -WARN missing_definition during which ends textual definition -WARN missing_definition ends after textual definition -WARN missing_definition immediately preceded by textual definition -WARN missing_definition immediately precedes textual definition -WARN missing_definition ends during textual definition -WARN missing_definition temporally related to textual definition -WARN missing_definition part of developmental precursor of textual definition -WARN missing_definition results in formation of textual definition -WARN missing_definition results in growth of textual definition -WARN missing_definition results in transport to from or in textual definition -WARN missing_definition formed as result of textual definition -WARN missing_definition immediately causally downstream of textual definition -WARN missing_definition phosphorylates textual definition -WARN missing_definition helper property (not for use in curation) textual definition -WARN missing_definition is kinase activity textual definition -WARN missing_definition receives input from textual definition -WARN missing_definition sends output to textual definition -WARN missing_definition relation between physical entity and a process or stage textual definition -WARN missing_definition depends on textual definition -WARN missing_definition causal relation between entities textual definition -WARN missing_definition causally influenced by textual definition -WARN missing_definition interaction relation helper property textual definition -WARN missing_definition molecular interaction relation helper property textual definition -WARN missing_definition results in assembly of textual definition -WARN missing_definition results in disassembly of textual definition -WARN missing_definition acts upstream of or within, positive effect textual definition -WARN missing_definition acts upstream of or within, negative effect textual definition -WARN missing_definition causally upstream of or within, negative effect textual definition -WARN missing_definition causally upstream of or within, positive effect textual definition -WARN missing_definition results in fusion of textual definition -WARN missing_definition agent role textual definition -WARN missing_definition chemosensory organ textual definition -WARN missing_definition anterior region of body textual definition -WARN missing_definition posterior region of body textual definition -WARN missing_definition membranous layer textual definition -WARN missing_definition vertebral foramen of atlas textual definition -WARN missing_definition head sensillum textual definition -WARN missing_definition subdivision of head textual definition -WARN missing_definition muscle of iris textual definition -WARN missing_definition gastric juice textual definition -WARN missing_definition parenchyma of pancreas textual definition -WARN missing_definition organ cavity textual definition -WARN missing_definition posterior neural tube textual definition -WARN missing_definition anterior neural tube textual definition -WARN missing_definition set of muscles of vertebral column textual definition -WARN missing_definition biliary bud textual definition -WARN missing_definition right horn of sinus venosus textual definition -WARN missing_definition basal plate metencephalon textual definition -WARN missing_definition outflow tract pulmonary component textual definition -WARN missing_definition developing anatomical structure textual definition -WARN missing_definition cervical region textual definition -WARN missing_definition non-neural ectoderm textual definition -WARN missing_definition extrahepatic part of hepatic duct textual definition -WARN missing_definition left dorsal aorta textual definition -WARN missing_definition right dorsal aorta textual definition -WARN missing_definition chemosensory system textual definition -WARN missing_definition extraembryonic mesoderm textual definition -WARN missing_definition spinal cord segment textual definition -WARN missing_definition pre-muscle condensation textual definition -WARN missing_definition zone of bone organ textual definition -WARN missing_definition neurocranial trabecula textual definition -WARN missing_definition posterior surface of head textual definition -WARN missing_definition common atrial chamber textual definition -WARN missing_definition ethmoid bone primordium textual definition -WARN missing_definition tetrapod frontal bone primordium textual definition -WARN missing_definition future spinal cord textual definition -WARN missing_definition future trigeminal ganglion textual definition -WARN missing_definition presumptive blood textual definition -WARN missing_definition glandular cuboidal epithelium textual definition -WARN missing_definition presumptive gut textual definition -WARN missing_definition mechanosensory system textual definition -WARN missing_definition 1st arch mandibular component textual definition -WARN missing_definition 1st arch maxillary component textual definition -WARN missing_definition early pharyngeal endoderm textual definition -WARN missing_definition microvascular endothelium textual definition -WARN missing_definition liver bud textual definition -WARN missing_definition respiratory primordium textual definition -WARN missing_definition pharyngeal region of foregut textual definition -WARN missing_definition indifferent external genitalia textual definition -WARN missing_definition embryonic nasal process textual definition -WARN missing_definition subdivision of trunk textual definition -WARN missing_definition midbrain mantle layer textual definition -WARN missing_definition spinal cord mantle layer textual definition -WARN missing_definition midbrain hindbrain boundary neural plate textual definition -WARN missing_definition trunk paraxial mesoderm textual definition -WARN missing_definition artery of lip textual definition -WARN missing_definition gut mesentery textual definition -WARN missing_definition dorsal pancreas textual definition -WARN missing_definition ventral pancreas textual definition -WARN missing_definition entire pharyngeal arch endoderm textual definition -WARN missing_definition sac textual definition -WARN missing_definition anterior lateral plate mesoderm textual definition -WARN missing_definition lobule textual definition -WARN missing_definition optic neural crest textual definition -WARN missing_definition aortic system textual definition -WARN missing_definition layer of sclera textual definition -WARN missing_definition germ layer / neural crest textual definition -WARN missing_definition pancreas dorsal primordium textual definition -WARN missing_definition pancreas ventral primordium textual definition -WARN missing_definition pneumatic cavity of bone textual definition -WARN missing_definition primary subdivision of cranial skeletal system textual definition -WARN missing_definition intra-ocular muscle textual definition -WARN missing_definition fibrous membrane of synovial tendon sheath textual definition -WARN missing_definition embryonic skin basal layer textual definition -WARN missing_definition lumen of gastrointestinal system textual definition -WARN missing_definition future upper lip textual definition -WARN missing_definition future lower lip textual definition -WARN missing_definition jaw muscle textual definition -WARN missing_definition fibrous connective tissue textual definition -WARN missing_definition collection of collagen fibrils textual definition -WARN missing_definition palatal part of dermatocranium textual definition -WARN missing_definition internal anal region textual definition -WARN missing_definition respiratory system arterial smooth muscle textual definition -WARN missing_definition extraembryonic cavity textual definition -WARN missing_definition external anal region textual definition -WARN missing_definition cloacal villus textual definition -WARN missing_definition subdivision of tube textual definition -WARN missing_definition subepicardial layer of epicardium textual definition -WARN missing_definition heart plus pericardium textual definition -WARN missing_definition heterogeneous tissue textual definition -WARN missing_definition spinal cord column textual definition -WARN missing_definition lamina of gray matter of spinal cord textual definition -WARN missing_definition fibrocollagenous connective tissue textual definition -WARN missing_definition skeletal musculature textual definition -WARN missing_definition cardiac muscle tissue of ventricle textual definition -WARN missing_definition dorsal side of post-anal tail textual definition -WARN missing_definition reproductive system mucosa textual definition -WARN missing_definition carotid artery endothelium textual definition -WARN missing_definition mucous gland of lung textual definition -WARN missing_definition gray matter of hindbrain textual definition -WARN missing_definition gray matter of midbrain textual definition -WARN missing_definition sensory organ epithelium textual definition -WARN missing_definition surface of eyeball textual definition -WARN missing_definition splenic arteriole textual definition -WARN missing_definition hindbrain marginal layer textual definition -WARN missing_definition spinal cord ventricular layer textual definition -WARN missing_definition sympathetic nerve textual definition -WARN missing_definition lymphomyeloid tissue textual definition -WARN missing_definition gland lumen textual definition -WARN missing_definition zone of organ textual definition -WARN missing_definition epithelial layer of duct textual definition -WARN missing_definition jaw epithelium textual definition -WARN missing_definition rectal artery textual definition -WARN missing_definition excretory duct textual definition -WARN missing_definition branch of external carotid artery textual definition -WARN missing_definition uveal vein textual definition -WARN missing_definition colic artery textual definition -WARN missing_definition cavity of cardiac chamber textual definition -WARN missing_definition serous cavity textual definition -WARN missing_definition wall of blood vessel textual definition -WARN missing_definition respiratory primordium epithelium textual definition -WARN missing_definition respiratory primordium mesenchyme textual definition -WARN missing_definition fibroelastic connective tissue textual definition -WARN missing_definition orifice of skull textual definition -WARN missing_definition pelvic vein textual definition -WARN missing_definition anterior wall of left ventricle textual definition -WARN missing_definition myocardium of anterior wall of left ventricle textual definition -WARN missing_definition myocardium of anterior wall of right ventricle textual definition -WARN missing_definition vasculature of spleen textual definition -WARN missing_definition vasculature of central nervous system plus retina textual definition -WARN missing_definition vasculature of central nervous system textual definition -WARN missing_definition wall of gallbladder textual definition -WARN missing_definition wall of brachiocephalic artery textual definition -WARN missing_definition wall of subclavian artery textual definition -WARN missing_definition wall of anal canal textual definition -WARN missing_definition wall of pulmonary artery textual definition -WARN missing_definition wall of synovial tendon sheath textual definition -WARN missing_definition wall of eyeball textual definition -WARN missing_definition wall of orbit textual definition -WARN missing_definition wall of common carotid artery textual definition -WARN missing_definition sigmoid vein textual definition -WARN missing_definition pancreatic artery textual definition -WARN missing_definition axial vasculature textual definition -WARN missing_definition panarthropod head textual definition -WARN missing_definition electric current unit textual definition -WARN missing_definition temperature unit textual definition -WARN missing_definition substance unit textual definition -WARN missing_definition luminous intensity unit textual definition -WARN missing_definition ampere textual definition -WARN missing_definition kelvin textual definition -WARN missing_definition mole textual definition -WARN missing_definition candela textual definition -WARN missing_definition picometer textual definition -WARN missing_definition femtogram textual definition -WARN missing_definition millisecond textual definition -WARN missing_definition microsecond textual definition -WARN missing_definition picosecond textual definition -WARN missing_definition milliampere textual definition -WARN missing_definition microampere textual definition -WARN missing_definition millimole textual definition -WARN missing_definition femtomole textual definition -WARN missing_definition attomole textual definition -WARN missing_definition base unit textual definition -WARN missing_definition area unit textual definition -WARN missing_definition acceleration unit textual definition -WARN missing_definition angular velocity unit textual definition -WARN missing_definition angular acceleration unit textual definition -WARN missing_definition concentration unit textual definition -WARN missing_definition mass density unit textual definition -WARN missing_definition luminance unit textual definition -WARN missing_definition area density unit textual definition -WARN missing_definition molar mass unit textual definition -WARN missing_definition molar volume unit textual definition -WARN missing_definition momentum unit textual definition -WARN missing_definition rotational frequency unit textual definition -WARN missing_definition specific volume unit textual definition -WARN missing_definition speed/velocity unit textual definition -WARN missing_definition unit of molarity textual definition -WARN missing_definition unit of molality textual definition -WARN missing_definition molal textual definition -WARN missing_definition millimolal textual definition -WARN missing_definition micromolal textual definition -WARN missing_definition nanomolal textual definition -WARN missing_definition picomolal textual definition -WARN missing_definition femtomolar textual definition -WARN missing_definition unit of normality textual definition -WARN missing_definition normal textual definition -WARN missing_definition mole fraction textual definition -WARN missing_definition meter per second per second textual definition -WARN missing_definition radian per second per second textual definition -WARN missing_definition radian per second textual definition -WARN missing_definition square meter textual definition -WARN missing_definition square centimeter textual definition -WARN missing_definition square millimeter textual definition -WARN missing_definition kilogram per cubic meter textual definition -WARN missing_definition gram per cubic centimeter textual definition -WARN missing_definition candela per square meter textual definition -WARN missing_definition kilogram per square meter textual definition -WARN missing_definition kilogram per mole textual definition -WARN missing_definition gram per mole textual definition -WARN missing_definition cubic meter per mole textual definition -WARN missing_definition cubic centimeter per mole textual definition -WARN missing_definition kilogram meter per second textual definition -WARN missing_definition turns per second textual definition -WARN missing_definition cubic meter per kilogram textual definition -WARN missing_definition meter per second textual definition -WARN missing_definition volume unit textual definition -WARN missing_definition cubic meter textual definition -WARN missing_definition femtoliter textual definition -WARN missing_definition frequency unit textual definition -WARN missing_definition force unit textual definition -WARN missing_definition newton textual definition -WARN missing_definition pressure unit textual definition -WARN missing_definition pascal textual definition -WARN missing_definition energy unit textual definition -WARN missing_definition joule textual definition -WARN missing_definition power unit textual definition -WARN missing_definition watt textual definition -WARN missing_definition illuminance unit textual definition -WARN missing_definition lux textual definition -WARN missing_definition luminous flux unit textual definition -WARN missing_definition lumen textual definition -WARN missing_definition catalytic activity unit textual definition -WARN missing_definition katal textual definition -WARN missing_definition angle unit textual definition -WARN missing_definition plane angle unit textual definition -WARN missing_definition radian textual definition -WARN missing_definition solid angle unit textual definition -WARN missing_definition steradian textual definition -WARN missing_definition activity (of a radionuclide) unit textual definition -WARN missing_definition dose equivalent unit textual definition -WARN missing_definition exposure unit textual definition -WARN missing_definition becquerel textual definition -WARN missing_definition curie textual definition -WARN missing_definition gray textual definition -WARN missing_definition rad textual definition -WARN missing_definition roentgen textual definition -WARN missing_definition sievert textual definition -WARN missing_definition millisievert textual definition -WARN missing_definition microsievert textual definition -WARN missing_definition Roentgen equivalent man textual definition -WARN missing_definition microgray textual definition -WARN missing_definition milligray textual definition -WARN missing_definition nanogray textual definition -WARN missing_definition nanosievert textual definition -WARN missing_definition millicurie textual definition -WARN missing_definition microcurie textual definition -WARN missing_definition disintegrations per minute textual definition -WARN missing_definition counts per minute textual definition -WARN missing_definition nanosecond textual definition -WARN missing_definition century textual definition -WARN missing_definition half life textual definition -WARN missing_definition foot candle textual definition -WARN missing_definition irradiance unit textual definition -WARN missing_definition watt per square meter textual definition -WARN missing_definition einstein per square meter per second textual definition -WARN missing_definition light unit textual definition -WARN missing_definition watt per steradian per square meter textual definition -WARN missing_definition radiant intensity unit textual definition -WARN missing_definition microeinstein per square meter per second textual definition -WARN missing_definition radiance unit textual definition -WARN missing_definition watt per steradian textual definition -WARN missing_definition parts per notation unit textual definition -WARN missing_definition parts per hundred textual definition -WARN missing_definition parts per thousand textual definition -WARN missing_definition parts per million textual definition -WARN missing_definition parts per billion textual definition -WARN missing_definition parts per trillion textual definition -WARN missing_definition parts per quadrillion textual definition -WARN missing_definition gram per milliliter textual definition -WARN missing_definition kilogram per liter textual definition -WARN missing_definition unit per volume unit textual definition -WARN missing_definition unit per milliliter textual definition -WARN missing_definition unit per liter textual definition -WARN missing_definition mass per unit volume textual definition -WARN missing_definition enzyme unit textual definition -WARN missing_definition density unit textual definition -WARN missing_definition linear density unit textual definition -WARN missing_definition kilogram per meter textual definition -WARN missing_definition degree textual definition -WARN missing_definition dimensionless unit textual definition -WARN missing_definition percent textual definition -WARN missing_definition pi textual definition -WARN missing_definition count unit textual definition -WARN missing_definition ratio unit textual definition -WARN missing_definition fraction textual definition -WARN missing_definition molecule count textual definition -WARN missing_definition purity percentage textual definition -WARN missing_definition confluence percentage textual definition -WARN missing_definition liter per kilogram textual definition -WARN missing_definition milliliter per kilogram textual definition -WARN missing_definition microliter per kilogram textual definition -WARN missing_definition cell concentration unit textual definition -WARN missing_definition cells per milliliter textual definition -WARN missing_definition catalytic (activity) concentration unit textual definition -WARN missing_definition katal per cubic meter textual definition -WARN missing_definition katal per liter textual definition -WARN missing_definition volume per unit volume textual definition -WARN missing_definition milliliter per cubic meter textual definition -WARN missing_definition deciliter textual definition -WARN missing_definition colony forming unit textual definition -WARN missing_definition plaque forming unit textual definition -WARN missing_definition colony forming unit per milliliter textual definition -WARN missing_definition plaque forming unit per volume textual definition -WARN missing_definition plaque forming unit per milliliter textual definition -WARN missing_definition disintegrations per second textual definition -WARN missing_definition electric potential difference unit textual definition -WARN missing_definition volt textual definition -WARN missing_definition electric charge textual definition -WARN missing_definition coulomb textual definition -WARN missing_definition dalton textual definition -WARN missing_definition kilodalton textual definition -WARN missing_definition watt-hour textual definition -WARN missing_definition kilowatt-hour textual definition -WARN missing_definition magnetic flux unit textual definition -WARN missing_definition weber textual definition -WARN missing_definition magnetic flux density unit textual definition -WARN missing_definition tesla textual definition -WARN missing_definition volt-hour textual definition -WARN missing_definition kilovolt-hour textual definition -WARN missing_definition information unit textual definition -WARN missing_definition bit textual definition -WARN missing_definition byte textual definition -WARN missing_definition kilobyte textual definition -WARN missing_definition megabyte textual definition -WARN missing_definition image resolution unit textual definition -WARN missing_definition chroma sampling unit textual definition -WARN missing_definition dynamic range unit textual definition -WARN missing_definition spatial resolution unit textual definition -WARN missing_definition dots per inch textual definition -WARN missing_definition micron pixel textual definition -WARN missing_definition pixels per inch textual definition -WARN missing_definition pixels per millimeter textual definition -WARN missing_definition base pair textual definition -WARN missing_definition kibibyte textual definition -WARN missing_definition mebibyte textual definition -WARN missing_definition millivolt textual definition -WARN missing_definition kilovolt textual definition -WARN missing_definition microvolt textual definition -WARN missing_definition nanovolt textual definition -WARN missing_definition picovolt textual definition -WARN missing_definition megavolt textual definition -WARN missing_definition surface tension unit textual definition -WARN missing_definition newton per meter textual definition -WARN missing_definition dyne per cm textual definition -WARN missing_definition viscosity unit textual definition -WARN missing_definition pascal second textual definition -WARN missing_definition poise textual definition -WARN missing_definition decibel textual definition -WARN missing_definition effective dose unit textual definition -WARN missing_definition conduction unit textual definition -WARN missing_definition electrical conduction unit textual definition -WARN missing_definition heat conduction unit textual definition -WARN missing_definition siemens textual definition -WARN missing_definition watt per meter kelvin textual definition -WARN missing_definition electronvolt textual definition -WARN missing_definition electric field strength unit textual definition -WARN missing_definition volt per meter textual definition -WARN missing_definition absorbance unit textual definition -WARN missing_definition volumetric flow rate unit textual definition -WARN missing_definition millimetres of mercury textual definition -WARN missing_definition milligram per liter textual definition -WARN missing_definition microgram per milliliter textual definition -WARN missing_definition nanogram per milliliter textual definition -WARN missing_definition milliunits per milliliter textual definition -WARN missing_definition rate unit textual definition -WARN missing_definition kilogram per hectare textual definition -WARN missing_definition giga textual definition -WARN missing_definition mega textual definition -WARN missing_definition kilo textual definition -WARN missing_definition deci textual definition -WARN missing_definition milli textual definition -WARN missing_definition centi textual definition -WARN missing_definition micro textual definition -WARN missing_definition nano textual definition -WARN missing_definition pico textual definition -WARN missing_definition femto textual definition -WARN missing_definition atto textual definition -WARN missing_definition dose unit textual definition -WARN missing_definition milligram per kilogram textual definition -WARN missing_definition milligram per square meter textual definition -WARN missing_definition dosage unit textual definition -WARN missing_definition milligram per kilogram per day textual definition -WARN missing_definition relative light unit textual definition -WARN missing_definition relative luminescence unit textual definition -WARN missing_definition relative fluorescence unit textual definition -WARN missing_definition megaHertz textual definition -WARN missing_definition centiMorgan textual definition -WARN missing_definition centiRay textual definition -WARN missing_definition mega base pair textual definition -WARN missing_definition giga base pair textual definition -WARN missing_definition square micrometer textual definition -WARN missing_definition millisiemens textual definition -WARN missing_definition micromole per litre textual definition -WARN missing_definition micromole per kilogram textual definition -WARN missing_definition millimeters per day textual definition -WARN missing_definition kilometer per hour textual definition -WARN missing_definition milli textual definition -WARN missing_definition hectare textual definition -WARN missing_definition inch textual definition -WARN missing_definition thou textual definition -WARN missing_definition foot textual definition -WARN missing_definition yard textual definition -WARN missing_definition chain textual definition -WARN missing_definition furlong textual definition -WARN missing_definition mile textual definition -WARN missing_definition league textual definition -WARN missing_definition maritime length unit textual definition -WARN missing_definition fathom textual definition -WARN missing_definition cable textual definition -WARN missing_definition nautical mile textual definition -WARN missing_definition perch textual definition -WARN missing_definition rood textual definition -WARN missing_definition acre textual definition -WARN missing_definition fluid ounce textual definition -WARN missing_definition gill textual definition -WARN missing_definition pint textual definition -WARN missing_definition quart textual definition -WARN missing_definition gallon textual definition -WARN missing_definition grain textual definition -WARN missing_definition drachm textual definition -WARN missing_definition ounce textual definition -WARN missing_definition pound textual definition -WARN missing_definition stone textual definition -WARN missing_definition quarter textual definition -WARN missing_definition hundredweight textual definition -WARN missing_definition ton textual definition -WARN missing_definition slug textual definition -WARN missing_definition teaspoon textual definition -WARN missing_definition micromole textual definition -WARN missing_definition gram per square meter textual definition -WARN missing_definition nanogram per microliter textual definition -WARN missing_definition large calorie textual definition -WARN missing_definition micrograms per wheaton bottle textual definition -WARN missing_definition picoampere textual definition -WARN missing_definition centigray textual definition -WARN missing_definition gigaelectronvolt textual definition -WARN missing_definition gigaelectronvolt per nucleon textual definition -WARN missing_definition megaelectronvolt per nucleon textual definition -WARN missing_definition kiloelectronvolt per micron textual definition -WARN missing_definition gray per minute textual definition -WARN missing_definition centigray per minute textual definition -WARN missing_definition milligray per minute textual definition -WARN missing_definition milligray per day textual definition -WARN missing_definition milligray per hour textual definition -WARN missing_definition milligray per second textual definition -WARN missing_definition kilometer textual definition -WARN missing_definition milligram per deciliter textual definition -WARN missing_definition microgram per deciliter textual definition -WARN missing_definition meter based unit textual definition -WARN missing_definition second based unit textual definition -WARN missing_definition ampere based unit textual definition -WARN missing_definition kelvin based unit textual definition -WARN missing_definition mole based unit textual definition -WARN missing_definition candela based unit textual definition -WARN missing_definition angstrom based unit textual definition -WARN missing_definition gram based unit textual definition -WARN missing_definition degree Celsius based unit textual definition -WARN missing_definition minute based unit textual definition -WARN missing_definition hour based unit textual definition -WARN missing_definition day based unit textual definition -WARN missing_definition week based unit textual definition -WARN missing_definition month based unit textual definition -WARN missing_definition year based unit textual definition -WARN missing_definition molar based unit textual definition -WARN missing_definition molal based unit textual definition -WARN missing_definition normal based unit textual definition -WARN missing_definition mole fraction based unit textual definition -WARN missing_definition meter per second per second based unit textual definition -WARN missing_definition radian per second per second based unit textual definition -WARN missing_definition radian per second based unit textual definition -WARN missing_definition square meter based unit textual definition -WARN missing_definition square centimeter based unit textual definition -WARN missing_definition square millimeter based unit textual definition -WARN missing_definition gram per cubic centimeter based unit textual definition -WARN missing_definition candela per square meter based unit textual definition -WARN missing_definition gram per mole based unit textual definition -WARN missing_definition cubic meter per mole based unit textual definition -WARN missing_definition cubic centimeter per mole based unit textual definition -WARN missing_definition turns per second based unit textual definition -WARN missing_definition cubic meter per kilogram based unit textual definition -WARN missing_definition meter per second based unit textual definition -WARN missing_definition cubic meter based unit textual definition -WARN missing_definition cubic centimeter based unit textual definition -WARN missing_definition liter based unit textual definition -WARN missing_definition cubic decimeter based unit textual definition -WARN missing_definition hertz based unit textual definition -WARN missing_definition newton based unit textual definition -WARN missing_definition pascal based unit textual definition -WARN missing_definition joule based unit textual definition -WARN missing_definition watt based unit textual definition -WARN missing_definition lux based unit textual definition -WARN missing_definition lumen based unit textual definition -WARN missing_definition katal based unit textual definition -WARN missing_definition radian based unit textual definition -WARN missing_definition steradian based unit textual definition -WARN missing_definition becquerel based unit textual definition -WARN missing_definition curie based unit textual definition -WARN missing_definition gray based unit textual definition -WARN missing_definition rad based unit textual definition -WARN missing_definition roentgen based unit textual definition -WARN missing_definition sievert based unit textual definition -WARN missing_definition Roentgen equivalent man based unit textual definition -WARN missing_definition disintegrations per minute based unit textual definition -WARN missing_definition counts per minute based unit textual definition -WARN missing_definition century based unit textual definition -WARN missing_definition half life based unit textual definition -WARN missing_definition foot candle based unit textual definition -WARN missing_definition watt per square meter based unit textual definition -WARN missing_definition einstein per square meter per second based unit textual definition -WARN missing_definition watt per steradian per square meter based unit textual definition -WARN missing_definition watt per steradian based unit textual definition -WARN missing_definition mass percentage based unit textual definition -WARN missing_definition mass volume percentage based unit textual definition -WARN missing_definition volume percentage based unit textual definition -WARN missing_definition parts per hundred based unit textual definition -WARN missing_definition parts per thousand based unit textual definition -WARN missing_definition parts per million based unit textual definition -WARN missing_definition parts per billion based unit textual definition -WARN missing_definition parts per trillion based unit textual definition -WARN missing_definition parts per quadrillion based unit textual definition -WARN missing_definition gram per milliliter based unit textual definition -WARN missing_definition gram per liter based unit textual definition -WARN missing_definition unit per milliliter based unit textual definition -WARN missing_definition unit per liter based unit textual definition -WARN missing_definition mass per unit volume based unit textual definition -WARN missing_definition enzyme unit based unit textual definition -WARN missing_definition degree based unit textual definition -WARN missing_definition pi based unit textual definition -WARN missing_definition molecule count based unit textual definition -WARN missing_definition purity percentage based unit textual definition -WARN missing_definition confluence percentage based unit textual definition -WARN missing_definition degree Fahrenheit based unit textual definition -WARN missing_definition pH based unit textual definition -WARN missing_definition liter per kilogram based unit textual definition -WARN missing_definition cells per milliliter based unit textual definition -WARN missing_definition katal per cubic meter based unit textual definition -WARN missing_definition katal per liter based unit textual definition -WARN missing_definition gram per deciliter based unit textual definition -WARN missing_definition colony forming unit based unit textual definition -WARN missing_definition plaque forming unit based unit textual definition -WARN missing_definition colony forming unit per milliliter based unit textual definition -WARN missing_definition plaque forming unit per milliliter based unit textual definition -WARN missing_definition disintegrations per second based unit textual definition -WARN missing_definition volt based unit textual definition -WARN missing_definition coulomb based unit textual definition -WARN missing_definition dalton based unit textual definition -WARN missing_definition watt-hour based unit textual definition -WARN missing_definition weber based unit textual definition -WARN missing_definition tesla based unit textual definition -WARN missing_definition volt-hour based unit textual definition -WARN missing_definition bit based unit textual definition -WARN missing_definition byte based unit textual definition -WARN missing_definition chroma sampling unit based unit textual definition -WARN missing_definition dynamic range unit based unit textual definition -WARN missing_definition dots per inch based unit textual definition -WARN missing_definition pixels per inch based unit textual definition -WARN missing_definition pixels per millimeter based unit textual definition -WARN missing_definition base pair based unit textual definition -WARN missing_definition kibibyte based unit textual definition -WARN missing_definition mebibyte based unit textual definition -WARN missing_definition newton per meter based unit textual definition -WARN missing_definition dyne per cm based unit textual definition -WARN missing_definition pascal second based unit textual definition -WARN missing_definition poise based unit textual definition -WARN missing_definition effective dose unit based unit textual definition -WARN missing_definition siemens based unit textual definition -WARN missing_definition watt per meter kelvin based unit textual definition -WARN missing_definition electronvolt based unit textual definition -WARN missing_definition volt per meter based unit textual definition -WARN missing_definition absorbance unit based unit textual definition -WARN missing_definition count per nanomolar second based unit textual definition -WARN missing_definition count per molar second based unit textual definition -WARN missing_definition count per nanomolar based unit textual definition -WARN missing_definition count per molar based unit textual definition -WARN missing_definition dosage unit based unit textual definition -WARN missing_definition relative light unit based unit textual definition -WARN missing_definition relative luminescence unit based unit textual definition -WARN missing_definition relative fluorescence unit based unit textual definition -WARN missing_definition square micrometer based unit textual definition -WARN missing_definition hectare based unit textual definition -WARN missing_definition inch based unit textual definition -WARN missing_definition thou based unit textual definition -WARN missing_definition foot based unit textual definition -WARN missing_definition yard based unit textual definition -WARN missing_definition chain based unit textual definition -WARN missing_definition furlong based unit textual definition -WARN missing_definition mile based unit textual definition -WARN missing_definition league based unit textual definition -WARN missing_definition maritime length unit based unit textual definition -WARN missing_definition fathom based unit textual definition -WARN missing_definition cable based unit textual definition -WARN missing_definition nautical mile based unit textual definition -WARN missing_definition perch based unit textual definition -WARN missing_definition rood based unit textual definition -WARN missing_definition acre based unit textual definition -WARN missing_definition fluid ounce based unit textual definition -WARN missing_definition gill based unit textual definition -WARN missing_definition pint based unit textual definition -WARN missing_definition quart based unit textual definition -WARN missing_definition gallon based unit textual definition -WARN missing_definition grain based unit textual definition -WARN missing_definition drachm based unit textual definition -WARN missing_definition ounce based unit textual definition -WARN missing_definition pound based unit textual definition -WARN missing_definition stone based unit textual definition -WARN missing_definition quarter based unit textual definition -WARN missing_definition hundredweight based unit textual definition -WARN missing_definition ton based unit textual definition -WARN missing_definition slug based unit textual definition -WARN missing_definition teaspoon based unit textual definition -WARN missing_definition gram per square meter based unit textual definition -WARN missing_definition large calorie based unit textual definition -WARN missing_definition gray per minute based unit textual definition -WARN missing_definition has parent hydride textual definition -WARN missing_definition is conjugate acid of textual definition -WARN missing_definition is conjugate base of textual definition -WARN missing_definition is substituent group from textual definition -WARN missing_definition is tautomer of textual definition -WARN missing_definition channel for textual definition -WARN missing_definition channels_from textual definition -WARN missing_definition channels_into textual definition -WARN missing_definition layer part of textual definition -WARN missing_definition protects textual definition -WARN missing_definition subdivision of textual definition -WARN missing_definition creator textual definition -WARN missing_definition Date textual definition -WARN missing_definition Description textual definition -WARN missing_definition title textual definition -WARN missing_definition license textual definition -WARN missing_definition http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled textual definition -WARN missing_definition Mus musculus subspecies textual definition -WARN missing_definition created_by textual definition -WARN missing_definition creation date textual definition -WARN missing_definition has_alternative_id textual definition -WARN missing_definition database_cross_reference textual definition -WARN missing_definition has_obo_namespace textual definition -WARN missing_definition has_related_synonym textual definition -WARN missing_definition in_subset textual definition -WARN missing_definition xsd:boolean textual definition -WARN missing_definition xsd:string textual definition +WARN duplicate_label_synonym rad has exact synonym rad +WARN duplicate_label_synonym mass per unit volume has exact synonym mass per unit volume +WARN duplicate_label_synonym fraction alternative term fraction +WARN duplicate_label_synonym pH has exact synonym pH WARN duplicate_scoped_synonym deoxyribonucleic acid has exact synonym deoxyribonucleic acids WARN duplicate_scoped_synonym deoxyribonucleic acid has_related_synonym deoxyribonucleic acids WARN duplicate_scoped_synonym ketone has exact synonym ketones @@ -2983,8 +1557,8 @@ WARN duplicate_scoped_synonym nanomolar alternative term nM WARN duplicate_scoped_synonym nanomolar has exact synonym nM WARN duplicate_scoped_synonym picomolar alternative term pM WARN duplicate_scoped_synonym picomolar has exact synonym pM -WARN duplicate_scoped_synonym cubic centimeter alternative term -WARN duplicate_scoped_synonym cubic centimeter has exact synonym +WARN duplicate_scoped_synonym cubic centimeter alternative term cc: +WARN duplicate_scoped_synonym cubic centimeter has exact synonym cc: WARN duplicate_scoped_synonym milliliter alternative term ml WARN duplicate_scoped_synonym milliliter has exact synonym ml WARN duplicate_scoped_synonym liter alternative term L @@ -3005,29 +1579,1569 @@ WARN duplicate_scoped_synonym gram per deciliter alternative term g/dl WARN duplicate_scoped_synonym gram per deciliter has exact synonym g/dl WARN duplicate_scoped_synonym microgram per liter alternative term ug/L WARN duplicate_scoped_synonym microgram per liter has exact synonym ug/L -WARN invalid_xref cell database_cross_reference -WARN invalid_xref cell database_cross_reference -WARN invalid_xref cell database_cross_reference -WARN invalid_xref cell database_cross_reference -INFO lowercase_definition independent continuant textual definition -INFO lowercase_definition independent continuant textual definition -INFO lowercase_definition process textual definition

-INFO lowercase_definition disposition IAO:0000600 -INFO lowercase_definition quality IAO:0000600 -INFO lowercase_definition specifically dependent continuant textual definition -INFO lowercase_definition specifically dependent continuant textual definition -INFO lowercase_definition role IAO:0000600 -INFO lowercase_definition object aggregate IAO:0000600 -INFO lowercase_definition generically dependent continuant textual definition +WARN equivalent_class_axiom_no_genus information representation concretizes information content entity +WARN equivalent_class_axiom_no_genus regulation of behavior regulates (processual) behavior process +WARN equivalent_class_axiom_no_genus classified data set is_specified_output_of class prediction data transformation +WARN equivalent_class_axiom_no_genus material processing achieves_planned_objective material transformation objective +WARN equivalent_class_axiom_no_genus manufacturing achieves_planned_objective manufacturing objective +WARN equivalent_class_axiom_no_genus clustered data set is_specified_output_of class discovery data transformation +WARN equivalent_class_axiom_no_genus decision tree building data transformation achieves_planned_objective decision tree induction objective +WARN equivalent_class_axiom_no_genus statistical model validation achieves_planned_objective cross validation objective +WARN equivalent_class_axiom_no_genus data transformation achieves_planned_objective data transformation objective +WARN equivalent_class_axiom_no_genus partitioning data transformation achieves_planned_objective partitioning objective +WARN equivalent_class_axiom_no_genus particle track has quality particle track structure +WARN equivalent_class_axiom_no_genus track formation has_output particle track +WARN equivalent_pair role owl:equivalentClass role +WARN equivalent_pair protein owl:equivalentClass protein +WARN invalid_xref cell database_cross_reference FMA:68646 +WARN invalid_xref cell database_cross_reference "KUPO:0000002 + +" +WARN invalid_xref cell database_cross_reference VHOG:0001533 +WARN invalid_xref cell database_cross_reference XAO:0003012 +WARN missing_definition has atomic number textual definition +WARN missing_definition fiat object part textual definition +WARN missing_definition site textual definition +WARN missing_definition object textual definition +WARN missing_definition has participant textual definition +WARN missing_definition immaterial entity textual definition +WARN missing_definition carbamate textual definition +WARN missing_definition electron donor textual definition +WARN missing_definition water textual definition +WARN missing_definition dioxygen textual definition +WARN missing_definition carbon dioxide textual definition +WARN missing_definition noradrenaline(1+) textual definition +WARN missing_definition dinitrogen textual definition +WARN missing_definition manganese atom textual definition +WARN missing_definition 5beta-cholane textual definition +WARN missing_definition alkaline earth metal atom textual definition +WARN missing_definition alkali metal atom textual definition +WARN missing_definition aminoglycan textual definition +WARN missing_definition benzopyrrole textual definition +WARN missing_definition bromine atom textual definition +WARN missing_definition cadmium atom textual definition +WARN missing_definition calcium atom textual definition +WARN missing_definition carbon oxide textual definition +WARN missing_definition carbonyl group textual definition +WARN missing_definition chloride salt textual definition +WARN missing_definition chlorine atom textual definition +WARN missing_definition chlorine molecular entity textual definition +WARN missing_definition cyclic peptide textual definition +WARN missing_definition monoatomic cation textual definition +WARN missing_definition fluorine atom textual definition +WARN missing_definition glycogens textual definition +WARN missing_definition halogen molecular entity textual definition +WARN missing_definition halogen textual definition +WARN missing_definition inorganic anion textual definition +WARN missing_definition inorganic oxide textual definition +WARN missing_definition inorganic salt textual definition +WARN missing_definition monoatomic ion textual definition +WARN missing_definition organic salt textual definition +WARN missing_definition iron molecular entity textual definition +WARN missing_definition lead atom textual definition +WARN missing_definition linear tetrapyrrole textual definition +WARN missing_definition magnesium atom textual definition +WARN missing_definition mercury atom textual definition +WARN missing_definition metal cation textual definition +WARN missing_definition monoatomic monocation textual definition +WARN missing_definition nitrogen atom textual definition +WARN missing_definition nonmetal atom textual definition +WARN missing_definition organic ion textual definition +WARN missing_definition organic oxide textual definition +WARN missing_definition oxygen atom textual definition +WARN missing_definition oxygen molecular entity textual definition +WARN missing_definition phosphoric acid derivative textual definition +WARN missing_definition phosphorus molecular entity textual definition +WARN missing_definition potassium atom textual definition +WARN missing_definition sodium atom textual definition +WARN missing_definition sodium chloride textual definition +WARN missing_definition sodium molecular entity textual definition +WARN missing_definition sulfur atom textual definition +WARN missing_definition sulfur molecular entity textual definition +WARN missing_definition tin atom textual definition +WARN missing_definition organic heterobicyclic compound textual definition +WARN missing_definition uranium atom textual definition +WARN missing_definition zinc atom textual definition +WARN missing_definition boron atom textual definition +WARN missing_definition arsenic atom textual definition +WARN missing_definition selenium atom textual definition +WARN missing_definition silicon atom textual definition +WARN missing_definition carbon atom textual definition +WARN missing_definition vanadium atom textual definition +WARN missing_definition tungsten textual definition +WARN missing_definition phosphorus atom textual definition +WARN missing_definition molybdenum atom textual definition +WARN missing_definition copper atom textual definition +WARN missing_definition carbonic acid textual definition +WARN missing_definition aluminium atom textual definition +WARN missing_definition gold atom textual definition +WARN missing_definition azanide textual definition +WARN missing_definition hydridodioxygen(1+) textual definition +WARN missing_definition lithium atom textual definition +WARN missing_definition helium atom textual definition +WARN missing_definition monoatomic dication textual definition +WARN missing_definition astatine atom textual definition +WARN missing_definition germanium atom textual definition +WARN missing_definition tellurium atom textual definition +WARN missing_definition silver atom textual definition +WARN missing_definition antimony atom textual definition +WARN missing_definition caesium atom textual definition +WARN missing_definition ruthenium atom textual definition +WARN missing_definition osmium atom textual definition +WARN missing_definition barium atom textual definition +WARN missing_definition europium atom textual definition +WARN missing_definition oxoacid derivative textual definition +WARN missing_definition inorganic hydride textual definition +WARN missing_definition monoatomic hydrogen textual definition +WARN missing_definition elemental hydrogen textual definition +WARN missing_definition elemental oxygen textual definition +WARN missing_definition diatomic oxygen textual definition +WARN missing_definition diatomic nitrogen textual definition +WARN missing_definition elemental nitrogen textual definition +WARN missing_definition molecular messenger textual definition +WARN missing_definition fuel textual definition +WARN missing_definition bismuth atom textual definition +WARN missing_definition carbon group element atom textual definition +WARN missing_definition noble gas atom textual definition +WARN missing_definition neon atom textual definition +WARN missing_definition radon atom textual definition +WARN missing_definition monoatomic helium textual definition +WARN missing_definition helium(2+) textual definition +WARN missing_definition boron group element atom textual definition +WARN missing_definition lanthanoid atom textual definition +WARN missing_definition actinoid atom textual definition +WARN missing_definition rare earth metal atom textual definition +WARN missing_definition rubidium atom textual definition +WARN missing_definition francium atom textual definition +WARN missing_definition strontium atom textual definition +WARN missing_definition radium atom textual definition +WARN missing_definition scandium atom textual definition +WARN missing_definition yttrium atom textual definition +WARN missing_definition scandium group element atom textual definition +WARN missing_definition lanthanum atom textual definition +WARN missing_definition actinium atom textual definition +WARN missing_definition zinc group element atom textual definition +WARN missing_definition titanium atom textual definition +WARN missing_definition zirconium atom textual definition +WARN missing_definition hafnium atom textual definition +WARN missing_definition niobium atom textual definition +WARN missing_definition titanium group element atom textual definition +WARN missing_definition rutherfordium atom textual definition +WARN missing_definition vanadium group element atom textual definition +WARN missing_definition tantalum atom textual definition +WARN missing_definition dubnium atom textual definition +WARN missing_definition chromium group element atom textual definition +WARN missing_definition seaborgium atom textual definition +WARN missing_definition manganese group element atom textual definition +WARN missing_definition technetium atom textual definition +WARN missing_definition bohrium atom textual definition +WARN missing_definition iron group element atom textual definition +WARN missing_definition hassium atom textual definition +WARN missing_definition cobalt group element atom textual definition +WARN missing_definition meitnerium atom textual definition +WARN missing_definition nickel group element atom textual definition +WARN missing_definition platinum textual definition +WARN missing_definition platinum group metal atom textual definition +WARN missing_definition copper group element atom textual definition +WARN missing_definition darmstadtium textual definition +WARN missing_definition cerium textual definition +WARN missing_definition technetium-99 textual definition +WARN missing_definition neodymium atom textual definition +WARN missing_definition promethium atom textual definition +WARN missing_definition samarium atom textual definition +WARN missing_definition gadolinium atom textual definition +WARN missing_definition terbium atom textual definition +WARN missing_definition dysprosium atom textual definition +WARN missing_definition erbium textual definition +WARN missing_definition thulium atom textual definition +WARN missing_definition ytterbium textual definition +WARN missing_definition lutetium atom textual definition +WARN missing_definition thorium textual definition +WARN missing_definition protactinium atom textual definition +WARN missing_definition neptunium atom textual definition +WARN missing_definition plutonium atom textual definition +WARN missing_definition americium atom textual definition +WARN missing_definition curium atom textual definition +WARN missing_definition berkelium atom textual definition +WARN missing_definition californium atom textual definition +WARN missing_definition einsteinium atom textual definition +WARN missing_definition fermium textual definition +WARN missing_definition mendelevium atom textual definition +WARN missing_definition nobelium textual definition +WARN missing_definition lawrencium atom textual definition +WARN missing_definition sulfur oxoacid textual definition +WARN missing_definition pnictogen oxoacid textual definition +WARN missing_definition sulfur oxoacid derivative textual definition +WARN missing_definition pnictogen oxoanion textual definition +WARN missing_definition phosphorus oxoanion textual definition +WARN missing_definition elemental pnictogen textual definition +WARN missing_definition sulfur oxoanion textual definition +WARN missing_definition chalcogen oxoacid textual definition +WARN missing_definition chalcogen oxoanion textual definition +WARN missing_definition radon-220 atom textual definition +WARN missing_definition radon-222 atom textual definition +WARN missing_definition radon-219 atom textual definition +WARN missing_definition actinoid molecular entity textual definition +WARN missing_definition uranium molecular entity textual definition +WARN missing_definition alkali metal cation textual definition +WARN missing_definition s-block element atom textual definition +WARN missing_definition d-block element atom textual definition +WARN missing_definition f-block element atom textual definition +WARN missing_definition benzenediols textual definition +WARN missing_definition carbon group molecular entity textual definition +WARN missing_definition hydrogen molecular entity textual definition +WARN missing_definition polycyclic compound textual definition +WARN missing_definition organic aromatic compound textual definition +WARN missing_definition f-block molecular entity textual definition +WARN missing_definition helium molecular entity textual definition +WARN missing_definition elemental helium textual definition +WARN missing_definition oxygen hydride textual definition +WARN missing_definition information biomacromolecule textual definition +WARN missing_definition proteinogenic amino-acid residue textual definition +WARN missing_definition carbohydrate acid textual definition +WARN missing_definition carbohydrate acid anion textual definition +WARN missing_definition iron group molecular entity textual definition +WARN missing_definition copper group molecular entity textual definition +WARN missing_definition nickel group molecular entity textual definition +WARN missing_definition platinum molecular entity textual definition +WARN missing_definition canonical nucleoside residue textual definition +WARN missing_definition canonical ribonucleoside residue textual definition +WARN missing_definition canonical deoxyribonucleoside residue textual definition +WARN missing_definition halide salt textual definition +WARN missing_definition gold molecular entity textual definition +WARN missing_definition nitrogen hydride textual definition +WARN missing_definition fossil fuel textual definition +WARN missing_definition hydroxy steroid textual definition +WARN missing_definition alkali metal salt textual definition +WARN missing_definition natural product fundamental parent textual definition +WARN missing_definition steroid fundamental parent textual definition +WARN missing_definition cholane textual definition +WARN missing_definition carbon oxoacid textual definition +WARN missing_definition dicarboxylic acid anion textual definition +WARN missing_definition sulfated glycosaminoglycan textual definition +WARN missing_definition carbohydrate sulfate textual definition +WARN missing_definition pnictogen hydride textual definition +WARN missing_definition cholanoid textual definition +WARN missing_definition inorganic chloride textual definition +WARN missing_definition bile acid anion textual definition +WARN missing_definition 5beta-cholanic acid textual definition +WARN missing_definition cholanic acids textual definition +WARN missing_definition phosphorus oxoacid derivative textual definition +WARN missing_definition phosphorus oxoacids and derivatives textual definition +WARN missing_definition chalcogen hydride textual definition +WARN missing_definition argon molecular entity textual definition +WARN missing_definition inorganic ion textual definition +WARN missing_definition inorganic cation textual definition +WARN missing_definition carbon-14 atom textual definition +WARN missing_definition carbon-13 atom textual definition +WARN missing_definition carbon-11 atom textual definition +WARN missing_definition carbon-10 atom textual definition +WARN missing_definition carbon-12 atom textual definition +WARN missing_definition oxygen-19 atom textual definition +WARN missing_definition nitrogen-16 atom textual definition +WARN missing_definition nitrogen-17 atom textual definition +WARN missing_definition chalcocarbonic acid textual definition +WARN missing_definition amino-acid anion textual definition +WARN missing_definition organic hydride textual definition +WARN missing_definition mononuclear parent hydride textual definition +WARN missing_definition elemental sodium textual definition +WARN missing_definition polonium-190 atom textual definition +WARN missing_definition polonium-191 atom textual definition +WARN missing_definition polonium-192 atom textual definition +WARN missing_definition polonium-193 atom textual definition +WARN missing_definition polonium-194 atom textual definition +WARN missing_definition polonium-195 atom textual definition +WARN missing_definition polonium-196 atom textual definition +WARN missing_definition polonium-197 atom textual definition +WARN missing_definition polonium-198 atom textual definition +WARN missing_definition polonium-199 atom textual definition +WARN missing_definition polonium-200 atom textual definition +WARN missing_definition polonium-201 atom textual definition +WARN missing_definition polonium-202 atom textual definition +WARN missing_definition polonium-204 atom textual definition +WARN missing_definition halide textual definition +WARN missing_definition sulfuric acid derivative textual definition +WARN missing_definition organic heteropolycyclic compound textual definition +WARN missing_definition polycyclic heteroarene textual definition +WARN missing_definition aminoalkylindole textual definition +WARN missing_definition organic sodium salt textual definition +WARN missing_definition inorganic sodium salt textual definition +WARN missing_definition carbonate textual definition +WARN missing_definition hydroxy group textual definition +WARN missing_definition hydrogensulfate textual definition +WARN missing_definition oxo group textual definition +WARN missing_definition carboxy group textual definition +WARN missing_definition sulfur oxide textual definition +WARN missing_definition argon atom textual definition +WARN missing_definition hydrogen atom textual definition +WARN missing_definition holmium atom textual definition +WARN missing_definition iridium atom textual definition +WARN missing_definition krypton atom textual definition +WARN missing_definition praseodymium atom textual definition +WARN missing_definition rhenium atom textual definition +WARN missing_definition xenon atom textual definition +WARN missing_definition canonical nucleotide residue textual definition +WARN missing_definition canonical deoxyribonucleotide residue textual definition +WARN missing_definition canonical ribonucleotide residue textual definition +WARN missing_definition onium compound textual definition +WARN missing_definition nucleotide residue textual definition +WARN missing_definition nucleoside residue textual definition +WARN missing_definition nitrogen molecular entity textual definition +WARN missing_definition organic divalent group textual definition +WARN missing_definition organic univalent group textual definition +WARN missing_definition organic polycyclic compound textual definition +WARN missing_definition physiological role textual definition +WARN missing_definition inorganic hydroxy compound textual definition +WARN missing_definition greenhouse gas textual definition +WARN missing_definition environmental contaminant textual definition +WARN missing_definition neuronal receptor cell textual definition +WARN missing_definition neural crest derived neuron textual definition +WARN missing_definition branched duct epithelial cell textual definition +WARN missing_definition squamous epithelial cell textual definition +WARN missing_definition neuron associated cell textual definition +WARN missing_definition CNS neuron (sensu Vertebrata) textual definition +WARN missing_definition visual pigment cell textual definition +WARN missing_definition protein secreting cell textual definition +WARN missing_definition seromucus secreting cell textual definition +WARN missing_definition peptide hormone secreting cell textual definition +WARN missing_definition insulin secreting cell textual definition +WARN missing_definition somatostatin secreting cell textual definition +WARN missing_definition steroid hormone secreting cell textual definition +WARN missing_definition binucleate cell textual definition +WARN missing_definition eukaryotic cell textual definition +WARN missing_definition Eumycetozoan cell textual definition +WARN missing_definition eye photoreceptor cell textual definition +WARN missing_definition crystallin accumulating cell textual definition +WARN missing_definition mucus secreting cell textual definition +WARN missing_definition extracellular matrix secreting cell textual definition +WARN missing_definition oxygen accumulating cell textual definition +WARN missing_definition extraembryonic cell textual definition +WARN missing_definition ganglion interneuron textual definition +WARN missing_definition endopolyploid cell textual definition +WARN missing_definition carbohydrate secreting cell textual definition +WARN missing_definition biogenic amine secreting cell textual definition +WARN missing_definition fungal cell textual definition +WARN missing_definition fibroblast of dermis textual definition +WARN missing_definition epithelial cell of lower respiratory tract textual definition +WARN missing_definition visual system neuron textual definition +WARN missing_definition microcirculation associated smooth muscle cell textual definition +WARN missing_definition cardiac blood vessel endothelial cell textual definition +WARN missing_definition His-Purkinje system cell textual definition +WARN missing_definition cardiac endothelial cell textual definition +WARN missing_definition camera-type eye photoreceptor cell textual definition +WARN missing_definition cardiac glial cell textual definition +WARN missing_definition cardiac myoblast textual definition +WARN missing_definition stomach neuroendocrine cell textual definition +WARN missing_definition lung ciliated cell textual definition +WARN missing_definition lung secretory cell textual definition +WARN missing_definition trophectodermal cell textual definition +WARN missing_definition lung endothelial cell textual definition +WARN missing_definition pulmonary artery endothelial cell textual definition +WARN missing_definition lacks_part textual definition +WARN missing_definition lacks_plasma_membrane_part textual definition +WARN missing_definition action specification textual definition +WARN missing_definition concretizes textual definition +WARN missing_definition intended to realize textual definition +WARN missing_definition realizes textual definition +WARN missing_definition information representation textual definition +WARN missing_definition physical information carrier textual definition +WARN missing_definition has number of atomic nuclei textual definition +WARN missing_definition atherosclerosis textual definition +WARN missing_definition iris disease textual definition +WARN missing_definition liver disease textual definition +WARN missing_definition bone marrow disease textual definition +WARN missing_definition cornea cancer textual definition +WARN missing_definition grain of desert sand textual definition +WARN missing_definition wood textual definition +WARN missing_definition platinum mine textual definition +WARN missing_definition gold mine textual definition +WARN missing_definition coal mine textual definition +WARN missing_definition contaminated water textual definition +WARN missing_definition coal mine waste material textual definition +WARN missing_definition temperate grassland biome textual definition +WARN missing_definition litter layer textual definition +WARN missing_definition human house textual definition +WARN missing_definition swamp forest textual definition +WARN missing_definition needleleaf forest textual definition +WARN missing_definition sclerophyllous forest textual definition +WARN missing_definition montane forest textual definition +WARN missing_definition ceiling textual definition +WARN missing_definition atmospheric wind textual definition +WARN missing_definition water raindrop textual definition +WARN missing_definition algal material textual definition +WARN missing_definition forest canopy textual definition +WARN missing_definition gill tissue material textual definition +WARN missing_definition aquatic ecosystem textual definition +WARN missing_definition marine ecosystem textual definition +WARN missing_definition terrestrial ecosystem textual definition +WARN missing_definition temperate grassland textual definition +WARN missing_definition iron mine textual definition +WARN missing_definition uranium mine textual definition +WARN missing_definition iron ore textual definition +WARN missing_definition gold ore textual definition +WARN missing_definition platinum ore textual definition +WARN missing_definition cement dust textual definition +WARN missing_definition dust from plant parts textual definition +WARN missing_definition forest process textual definition +WARN missing_definition forest area expansion textual definition +WARN missing_definition generation of energy from coal textual definition +WARN missing_definition stellar radiation energy textual definition +WARN missing_definition coal power plant textual definition +WARN missing_definition solar power station textual definition +WARN missing_definition ocean thermal power station textual definition +WARN missing_definition tidal power plant textual definition +WARN missing_definition integumental system environment textual definition +WARN missing_definition results in distribution of textual definition +WARN missing_definition results in fission of textual definition +WARN missing_definition hasAncestryStatus textual definition +WARN missing_definition has measurement value textual definition +WARN missing_definition has measurement unit label textual definition +WARN missing_definition jaw movement textual definition +WARN missing_definition root textual definition +WARN missing_definition Cricetinae textual definition +WARN missing_definition Mesocricetus textual definition +WARN missing_definition Muridae textual definition +WARN missing_definition Mus caroli textual definition +WARN missing_definition Mus musculus textual definition +WARN missing_definition Mus spretus textual definition +WARN missing_definition Rattus textual definition +WARN missing_definition Viruses textual definition +WARN missing_definition Obtectomera textual definition +WARN missing_definition Lumbricinae textual definition +WARN missing_definition Lumbricus terrestris complex textual definition +WARN missing_definition Lumbricus rubellus complex textual definition +WARN missing_definition Sedentaria textual definition +WARN missing_definition Canalipalpata textual definition +WARN missing_definition Xenoturbellida textual definition +WARN missing_definition Xenoturbella textual definition +WARN missing_definition Sarsostraca textual definition +WARN missing_definition Phyllopoda textual definition +WARN missing_definition Anomopoda textual definition +WARN missing_definition Eubrachyura textual definition +WARN missing_definition Heterotremata textual definition +WARN missing_definition Myxini textual definition +WARN missing_definition Teleostomi textual definition +WARN missing_definition Euteleostomi textual definition +WARN missing_definition Chromadorea textual definition +WARN missing_definition Ecdysozoa textual definition +WARN missing_definition Lophotrochozoa textual definition +WARN missing_definition Neoteleostei textual definition +WARN missing_definition Eurypterygia textual definition +WARN missing_definition Ctenosquamata textual definition +WARN missing_definition Acanthomorphata textual definition +WARN missing_definition Euacanthomorphacea textual definition +WARN missing_definition Acipenserinae textual definition +WARN missing_definition Acipenserini textual definition +WARN missing_definition Zygnemophyceae textual definition +WARN missing_definition Streptophytina textual definition +WARN missing_definition Xenacoelomorpha textual definition +WARN missing_definition cellular organisms textual definition +WARN missing_definition Archelosauria textual definition +WARN missing_definition Dipnotetrapodomorpha textual definition +WARN missing_definition Eumycetozoa textual definition +WARN missing_definition Boreoeutheria textual definition +WARN missing_definition Acrogymnospermae textual definition +WARN missing_definition Mesangiospermae textual definition +WARN missing_definition Petrosaviidae textual definition +WARN missing_definition Gnetidae textual definition +WARN missing_definition Pinales textual definition +WARN missing_definition Acoelomorpha textual definition +WARN missing_definition Saccharomycotina textual definition +WARN missing_definition Schizosaccharomycetes textual definition +WARN missing_definition Cyclostomata textual definition +WARN missing_definition Osteoglossocephalai textual definition +WARN missing_definition Euteleosteomorpha textual definition +WARN missing_definition Percomorphaceae textual definition +WARN missing_definition Carangaria textual definition +WARN missing_definition Eupercaria textual definition +WARN missing_definition Xenoturbellidae textual definition +WARN missing_definition Galloanserae textual definition +WARN missing_definition Eisenia andrei textual definition +WARN missing_definition Acipenseroidei textual definition +WARN missing_definition Actinopteri textual definition +WARN missing_definition Clupeocephala textual definition +WARN missing_definition Otophysi textual definition +WARN missing_definition Cypriniphysae textual definition +WARN missing_definition Otomorpha textual definition +WARN missing_definition Myomorpha textual definition +WARN missing_definition Enchytraeida textual definition +WARN missing_definition Pancrustacea textual definition +WARN missing_definition Mandibulata textual definition +WARN missing_definition Bacteria textual definition +WARN missing_definition Dictyosteliaceae textual definition +WARN missing_definition Dictyosteliales textual definition +WARN missing_definition Homininae textual definition +WARN missing_definition Archaea textual definition +WARN missing_definition Multicrustacea textual definition +WARN missing_definition Hirudinida textual definition +WARN missing_definition Rhabditina textual definition +WARN missing_definition Rhabditomorpha textual definition +WARN missing_definition Evosea textual definition +WARN missing_definition Discoba textual definition +WARN missing_definition Xenopus textual definition +WARN missing_definition Zygnematophycidae textual definition +WARN missing_definition Ochrophyta textual definition +WARN missing_definition Spiralia textual definition +WARN missing_definition Sar textual definition +WARN missing_definition Danionidae textual definition +WARN missing_definition Danioninae textual definition +WARN missing_definition Eukaryota textual definition +WARN missing_definition Bovinae textual definition +WARN missing_definition Crassiclitellata textual definition +WARN missing_definition Conifers I textual definition +WARN missing_definition Phaeophyceae textual definition +WARN missing_definition Oryzomys textual definition +WARN missing_definition Cancroidea textual definition +WARN missing_definition Pipoidea textual definition +WARN missing_definition Ranoidea textual definition +WARN missing_definition Anthophila textual definition +WARN missing_definition Cyprinoidei textual definition +WARN missing_definition Pleuronectoidei textual definition +WARN missing_definition Tetraodontiformes textual definition +WARN missing_definition Tetraodontoidei textual definition +WARN missing_definition Tetraodontidae textual definition +WARN missing_definition Takifugu textual definition +WARN missing_definition Takifugu rubripes textual definition +WARN missing_definition Laurasiatheria textual definition +WARN missing_definition Euarchontoglires textual definition +WARN missing_definition Glires textual definition +WARN missing_definition Simiiformes textual definition +WARN missing_definition Cercopithecoidea textual definition +WARN missing_definition Hominoidea textual definition +WARN missing_definition Zygnematales textual definition +WARN missing_definition Embryophyta textual definition +WARN missing_definition Bryophyta textual definition +WARN missing_definition Sophophora textual definition +WARN missing_definition melanogaster group textual definition +WARN missing_definition melanogaster subgroup textual definition +WARN missing_definition Chondrostei textual definition +WARN missing_definition Teleostei textual definition +WARN missing_definition Tetradontoidea textual definition +WARN missing_definition Ostariophysi textual definition +WARN missing_definition Tetrapoda textual definition +WARN missing_definition Amniota textual definition +WARN missing_definition Theria textual definition +WARN missing_definition Sauria textual definition +WARN missing_definition Dictyostelia textual definition +WARN missing_definition Viridiplantae textual definition +WARN missing_definition Coniferophyta textual definition +WARN missing_definition Pinidae textual definition +WARN missing_definition Opisthokonta textual definition +WARN missing_definition Pinaceae textual definition +WARN missing_definition Metazoa textual definition +WARN missing_definition Bilateria textual definition +WARN missing_definition Protostomia textual definition +WARN missing_definition Neoptera textual definition +WARN missing_definition Endopterygota textual definition +WARN missing_definition Deuterostomia textual definition +WARN missing_definition Carnivora textual definition +WARN missing_definition Alveolata textual definition +WARN missing_definition Stramenopiles textual definition +WARN missing_definition Euglenozoa textual definition +WARN missing_definition Gnetopsida textual definition +WARN missing_definition Cricetidae textual definition +WARN missing_definition Muroidea textual definition +WARN missing_definition Gnetales textual definition +WARN missing_definition Felinae textual definition +WARN missing_definition Magnoliopsida textual definition +WARN missing_definition Schizosaccharomycetales textual definition +WARN missing_definition Apoidea textual definition +WARN missing_definition Streptophyta textual definition +WARN missing_definition Suina textual definition +WARN missing_definition Pecora textual definition +WARN missing_definition Ditrysia textual definition +WARN missing_definition Papilionoidea textual definition +WARN missing_definition Haplorrhini textual definition +WARN missing_definition Feliformia textual definition +WARN missing_definition Caniformia textual definition +WARN missing_definition Artemiidae textual definition +WARN missing_definition Glaucocystophyceae textual definition +WARN missing_definition Poales textual definition +WARN missing_definition Murinae textual definition +WARN missing_definition Sigmodontinae textual definition +WARN missing_definition Mammalia textual definition +WARN missing_definition Glossata textual definition +WARN missing_definition Neolepidoptera textual definition +WARN missing_definition Heteroneura textual definition +WARN missing_definition Siboglinidae textual definition +WARN missing_definition Neopterygii textual definition +WARN missing_definition Batrachia textual definition +WARN missing_definition Protacanthopterygii textual definition +WARN missing_definition Clitellata textual definition +WARN missing_definition Dinosauria textual definition +WARN missing_definition Saurischia textual definition +WARN missing_definition Theropoda textual definition +WARN missing_definition Coelurosauria textual definition +WARN missing_definition Muscomorpha textual definition +WARN missing_definition Schizophora textual definition +WARN missing_definition Acalyptratae textual definition +WARN missing_definition Ephydroidea textual definition +WARN missing_definition Drosophilinae textual definition +WARN missing_definition Liliopsida textual definition +WARN missing_definition Poaceae textual definition +WARN missing_definition Dikarya textual definition +WARN missing_definition Taphrinomycotina textual definition +WARN missing_definition Drosophilini textual definition +WARN missing_definition commelinids textual definition +WARN missing_definition Fungi textual definition +WARN missing_definition Cyclorrhapha textual definition +WARN missing_definition Eremoneura textual definition +WARN missing_definition Ascomycota textual definition +WARN missing_definition Saccharomycetes textual definition +WARN missing_definition Saccharomycetales textual definition +WARN missing_definition Saccharomycetaceae textual definition +WARN missing_definition Schizosaccharomycetaceae textual definition +WARN missing_definition Schizosaccharomyces textual definition +WARN missing_definition Schizosaccharomyces pombe textual definition +WARN missing_definition Saccharomyces textual definition +WARN missing_definition Saccharomyces cerevisiae textual definition +WARN missing_definition Salmoninae textual definition +WARN missing_definition Insecta textual definition +WARN missing_definition Amoebozoa textual definition +WARN missing_definition Hirudinea textual definition +WARN missing_definition Rhabditoidea textual definition +WARN missing_definition Peloderinae textual definition +WARN missing_definition PX clade textual definition +WARN missing_definition Dictyostelium textual definition +WARN missing_definition Pinopsida textual definition +WARN missing_definition Tracheophyta textual definition +WARN missing_definition Spermatophyta textual definition +WARN missing_definition Porifera textual definition +WARN missing_definition Eumetazoa textual definition +WARN missing_definition Cnidaria textual definition +WARN missing_definition Platyhelminthes textual definition +WARN missing_definition Nematoda textual definition +WARN missing_definition Rhabditida textual definition +WARN missing_definition Caenorhabditis textual definition +WARN missing_definition Caenorhabditis elegans textual definition +WARN missing_definition Rhabditidae textual definition +WARN missing_definition Annelida textual definition +WARN missing_definition Polychaeta textual definition +WARN missing_definition Sabellida textual definition +WARN missing_definition Oligochaeta textual definition +WARN missing_definition Enchytraeidae textual definition +WARN missing_definition Enchytraeus textual definition +WARN missing_definition Lumbricina textual definition +WARN missing_definition Lumbricidae textual definition +WARN missing_definition Eisenia textual definition +WARN missing_definition Eisenia fetida textual definition +WARN missing_definition Lumbricus textual definition +WARN missing_definition Lumbricus terrestris textual definition +WARN missing_definition Hirudiniformes textual definition +WARN missing_definition Hirudinidae textual definition +WARN missing_definition Mollusca textual definition +WARN missing_definition Arthropoda textual definition +WARN missing_definition Crustacea textual definition +WARN missing_definition Branchiopoda textual definition +WARN missing_definition Anostraca textual definition +WARN missing_definition Artemia textual definition +WARN missing_definition Cladocera textual definition +WARN missing_definition Daphnia textual definition +WARN missing_definition Malacostraca textual definition +WARN missing_definition Eucarida textual definition +WARN missing_definition Decapoda textual definition +WARN missing_definition Pleocyemata textual definition +WARN missing_definition Brachyura textual definition +WARN missing_definition Cancridae textual definition +WARN missing_definition Hexapoda textual definition +WARN missing_definition Lepidoptera textual definition +WARN missing_definition Diptera textual definition +WARN missing_definition saccharomyceta textual definition +WARN missing_definition Brachycera textual definition +WARN missing_definition Eumalacostraca textual definition +WARN missing_definition Drosophilidae textual definition +WARN missing_definition Drosophila textual definition +WARN missing_definition Drosophila melanogaster textual definition +WARN missing_definition Hymenoptera textual definition +WARN missing_definition Apocrita textual definition +WARN missing_definition Aculeata textual definition +WARN missing_definition Apidae textual definition +WARN missing_definition Pterygota textual definition +WARN missing_definition Chordata textual definition +WARN missing_definition Tunicata textual definition +WARN missing_definition Vertebrata textual definition +WARN missing_definition Myxiniformes textual definition +WARN missing_definition Myxinidae textual definition +WARN missing_definition Daphniidae textual definition +WARN missing_definition Gnathostomata textual definition +WARN missing_definition Chondrichthyes textual definition +WARN missing_definition Euphyllophyta textual definition +WARN missing_definition Holocephali textual definition +WARN missing_definition Chimaeriformes textual definition +WARN missing_definition Dipnomorpha textual definition +WARN missing_definition Actinopterygii textual definition +WARN missing_definition Acipenseriformes textual definition +WARN missing_definition Acipenseridae textual definition +WARN missing_definition Acipenser textual definition +WARN missing_definition Cypriniformes textual definition +WARN missing_definition Danio textual definition +WARN missing_definition Danio rerio textual definition +WARN missing_definition Salmoniformes textual definition +WARN missing_definition Salmonidae textual definition +WARN missing_definition Oncorhynchus textual definition +WARN missing_definition Salmo textual definition +WARN missing_definition Pleuronectiformes textual definition +WARN missing_definition Pleuronectidae textual definition +WARN missing_definition Sarcopterygii textual definition +WARN missing_definition Amphibia textual definition +WARN missing_definition Anura textual definition +WARN missing_definition Pipidae textual definition +WARN missing_definition Xenopus textual definition +WARN missing_definition Xenopus laevis textual definition +WARN missing_definition Xenopodinae textual definition +WARN missing_definition Ranidae textual definition +WARN missing_definition Neobatrachia textual definition +WARN missing_definition Diplostraca textual definition +WARN missing_definition Sauropsida textual definition +WARN missing_definition Archosauria textual definition +WARN missing_definition Dicondylia textual definition +WARN missing_definition Artemia salina textual definition +WARN missing_definition Amphiesmenoptera textual definition +WARN missing_definition Mus textual definition +WARN missing_definition Aves textual definition +WARN missing_definition Palaeognathae textual definition +WARN missing_definition Struthioniformes textual definition +WARN missing_definition Struthionidae textual definition +WARN missing_definition Struthio textual definition +WARN missing_definition Struthio camelus textual definition +WARN missing_definition Neognathae textual definition +WARN missing_definition Anseriformes textual definition +WARN missing_definition Anatidae textual definition +WARN missing_definition Panarthropoda textual definition +WARN missing_definition Columbiformes textual definition +WARN missing_definition Columbidae textual definition +WARN missing_definition Craniata textual definition +WARN missing_definition Galliformes textual definition +WARN missing_definition Phasianidae textual definition +WARN missing_definition Gallus textual definition +WARN missing_definition Gallus gallus textual definition +WARN missing_definition Phasianinae textual definition +WARN missing_definition Enchytraeus crypticus textual definition +WARN missing_definition Artiodactyla textual definition +WARN missing_definition Prototheria textual definition +WARN missing_definition Monotremata textual definition +WARN missing_definition Tachyglossidae textual definition +WARN missing_definition Eutheria textual definition +WARN missing_definition Primates textual definition +WARN missing_definition Platyrrhini textual definition +WARN missing_definition Catarrhini textual definition +WARN missing_definition Cercopithecidae textual definition +WARN missing_definition Cercopithecinae textual definition +WARN missing_definition Macaca textual definition +WARN missing_definition Macaca mulatta textual definition +WARN missing_definition Hominidae textual definition +WARN missing_definition Homo textual definition +WARN missing_definition Homo sapiens textual definition +WARN missing_definition Canidae textual definition +WARN missing_definition Canis textual definition +WARN missing_definition Vulpes textual definition +WARN missing_definition Felidae textual definition +WARN missing_definition Felis textual definition +WARN missing_definition Felis catus textual definition +WARN missing_definition Suidae textual definition +WARN missing_definition Sus textual definition +WARN missing_definition Ruminantia textual definition +WARN missing_definition Cervidae textual definition +WARN missing_definition Rangifer textual definition +WARN missing_definition Odocoileinae textual definition +WARN missing_definition Bovidae textual definition +WARN missing_definition Bos textual definition +WARN missing_definition Bos taurus textual definition +WARN missing_definition Ovis textual definition +WARN missing_definition Ovis aries textual definition +WARN missing_definition Caprinae textual definition +WARN missing_definition Lagomorpha textual definition +WARN missing_definition Rodentia textual definition +WARN missing_definition plan textual definition +WARN missing_definition qualitative textual definition +WARN missing_definition physical quality of a process textual definition +WARN missing_definition sloped downward textual definition +WARN missing_definition astronaut textual definition +WARN missing_definition military textual definition +WARN missing_definition medical professional textual definition +WARN missing_definition dentist textual definition +WARN missing_definition radiologist textual definition +WARN missing_definition risk estimate textual definition +WARN missing_definition lifetime risk estimate textual definition +WARN missing_definition biological process textual definition +WARN missing_definition cellular process textual definition +WARN missing_definition track formation textual definition +WARN missing_definition mass number textual definition +WARN missing_definition contained in textual definition +WARN missing_definition contains textual definition +WARN missing_definition innervated_by textual definition +WARN missing_definition has component activity textual definition +WARN missing_definition directly regulated by textual definition +WARN missing_definition before or simultaneous with textual definition +WARN missing_definition during which ends textual definition +WARN missing_definition ends after textual definition +WARN missing_definition immediately preceded by textual definition +WARN missing_definition immediately precedes textual definition +WARN missing_definition ends during textual definition +WARN missing_definition temporally related to textual definition +WARN missing_definition part of developmental precursor of textual definition +WARN missing_definition results in formation of textual definition +WARN missing_definition results in growth of textual definition +WARN missing_definition results in transport to from or in textual definition +WARN missing_definition formed as result of textual definition +WARN missing_definition immediately causally downstream of textual definition +WARN missing_definition phosphorylates textual definition +WARN missing_definition helper property (not for use in curation) textual definition +WARN missing_definition is kinase activity textual definition +WARN missing_definition receives input from textual definition +WARN missing_definition sends output to textual definition +WARN missing_definition relation between physical entity and a process or stage textual definition +WARN missing_definition depends on textual definition +WARN missing_definition causal relation between entities textual definition +WARN missing_definition causally influenced by textual definition +WARN missing_definition interaction relation helper property textual definition +WARN missing_definition molecular interaction relation helper property textual definition +WARN missing_definition results in assembly of textual definition +WARN missing_definition results in disassembly of textual definition +WARN missing_definition acts upstream of or within, positive effect textual definition +WARN missing_definition acts upstream of or within, negative effect textual definition +WARN missing_definition causally upstream of or within, negative effect textual definition +WARN missing_definition causally upstream of or within, positive effect textual definition +WARN missing_definition results in fusion of textual definition +WARN missing_definition agent role textual definition +WARN missing_definition chemosensory organ textual definition +WARN missing_definition anterior region of body textual definition +WARN missing_definition posterior region of body textual definition +WARN missing_definition membranous layer textual definition +WARN missing_definition vertebral foramen of atlas textual definition +WARN missing_definition head sensillum textual definition +WARN missing_definition subdivision of head textual definition +WARN missing_definition muscle of iris textual definition +WARN missing_definition gastric juice textual definition +WARN missing_definition parenchyma of pancreas textual definition +WARN missing_definition organ cavity textual definition +WARN missing_definition posterior neural tube textual definition +WARN missing_definition anterior neural tube textual definition +WARN missing_definition set of muscles of vertebral column textual definition +WARN missing_definition biliary bud textual definition +WARN missing_definition right horn of sinus venosus textual definition +WARN missing_definition basal plate metencephalon textual definition +WARN missing_definition outflow tract pulmonary component textual definition +WARN missing_definition developing anatomical structure textual definition +WARN missing_definition cervical region textual definition +WARN missing_definition non-neural ectoderm textual definition +WARN missing_definition extrahepatic part of hepatic duct textual definition +WARN missing_definition left dorsal aorta textual definition +WARN missing_definition right dorsal aorta textual definition +WARN missing_definition chemosensory system textual definition +WARN missing_definition extraembryonic mesoderm textual definition +WARN missing_definition spinal cord segment textual definition +WARN missing_definition pre-muscle condensation textual definition +WARN missing_definition zone of bone organ textual definition +WARN missing_definition neurocranial trabecula textual definition +WARN missing_definition posterior surface of head textual definition +WARN missing_definition common atrial chamber textual definition +WARN missing_definition ethmoid bone primordium textual definition +WARN missing_definition tetrapod frontal bone primordium textual definition +WARN missing_definition future spinal cord textual definition +WARN missing_definition future trigeminal ganglion textual definition +WARN missing_definition presumptive blood textual definition +WARN missing_definition glandular cuboidal epithelium textual definition +WARN missing_definition presumptive gut textual definition +WARN missing_definition mechanosensory system textual definition +WARN missing_definition 1st arch mandibular component textual definition +WARN missing_definition 1st arch maxillary component textual definition +WARN missing_definition early pharyngeal endoderm textual definition +WARN missing_definition microvascular endothelium textual definition +WARN missing_definition liver bud textual definition +WARN missing_definition respiratory primordium textual definition +WARN missing_definition pharyngeal region of foregut textual definition +WARN missing_definition indifferent external genitalia textual definition +WARN missing_definition embryonic nasal process textual definition +WARN missing_definition subdivision of trunk textual definition +WARN missing_definition midbrain mantle layer textual definition +WARN missing_definition spinal cord mantle layer textual definition +WARN missing_definition midbrain hindbrain boundary neural plate textual definition +WARN missing_definition trunk paraxial mesoderm textual definition +WARN missing_definition artery of lip textual definition +WARN missing_definition gut mesentery textual definition +WARN missing_definition dorsal pancreas textual definition +WARN missing_definition ventral pancreas textual definition +WARN missing_definition entire pharyngeal arch endoderm textual definition +WARN missing_definition sac textual definition +WARN missing_definition anterior lateral plate mesoderm textual definition +WARN missing_definition lobule textual definition +WARN missing_definition optic neural crest textual definition +WARN missing_definition aortic system textual definition +WARN missing_definition layer of sclera textual definition +WARN missing_definition germ layer / neural crest textual definition +WARN missing_definition pancreas dorsal primordium textual definition +WARN missing_definition pancreas ventral primordium textual definition +WARN missing_definition pneumatic cavity of bone textual definition +WARN missing_definition primary subdivision of cranial skeletal system textual definition +WARN missing_definition intra-ocular muscle textual definition +WARN missing_definition fibrous membrane of synovial tendon sheath textual definition +WARN missing_definition embryonic skin basal layer textual definition +WARN missing_definition lumen of gastrointestinal system textual definition +WARN missing_definition future upper lip textual definition +WARN missing_definition future lower lip textual definition +WARN missing_definition jaw muscle textual definition +WARN missing_definition fibrous connective tissue textual definition +WARN missing_definition collection of collagen fibrils textual definition +WARN missing_definition palatal part of dermatocranium textual definition +WARN missing_definition internal anal region textual definition +WARN missing_definition respiratory system arterial smooth muscle textual definition +WARN missing_definition extraembryonic cavity textual definition +WARN missing_definition external anal region textual definition +WARN missing_definition cloacal villus textual definition +WARN missing_definition subdivision of tube textual definition +WARN missing_definition subepicardial layer of epicardium textual definition +WARN missing_definition heart plus pericardium textual definition +WARN missing_definition heterogeneous tissue textual definition +WARN missing_definition spinal cord column textual definition +WARN missing_definition lamina of gray matter of spinal cord textual definition +WARN missing_definition fibrocollagenous connective tissue textual definition +WARN missing_definition skeletal musculature textual definition +WARN missing_definition cardiac muscle tissue of ventricle textual definition +WARN missing_definition dorsal side of post-anal tail textual definition +WARN missing_definition reproductive system mucosa textual definition +WARN missing_definition carotid artery endothelium textual definition +WARN missing_definition mucous gland of lung textual definition +WARN missing_definition gray matter of hindbrain textual definition +WARN missing_definition gray matter of midbrain textual definition +WARN missing_definition sensory organ epithelium textual definition +WARN missing_definition surface of eyeball textual definition +WARN missing_definition splenic arteriole textual definition +WARN missing_definition hindbrain marginal layer textual definition +WARN missing_definition spinal cord ventricular layer textual definition +WARN missing_definition sympathetic nerve textual definition +WARN missing_definition lymphomyeloid tissue textual definition +WARN missing_definition gland lumen textual definition +WARN missing_definition zone of organ textual definition +WARN missing_definition epithelial layer of duct textual definition +WARN missing_definition jaw epithelium textual definition +WARN missing_definition rectal artery textual definition +WARN missing_definition excretory duct textual definition +WARN missing_definition branch of external carotid artery textual definition +WARN missing_definition uveal vein textual definition +WARN missing_definition colic artery textual definition +WARN missing_definition cavity of cardiac chamber textual definition +WARN missing_definition serous cavity textual definition +WARN missing_definition wall of blood vessel textual definition +WARN missing_definition respiratory primordium epithelium textual definition +WARN missing_definition respiratory primordium mesenchyme textual definition +WARN missing_definition fibroelastic connective tissue textual definition +WARN missing_definition orifice of skull textual definition +WARN missing_definition pelvic vein textual definition +WARN missing_definition anterior wall of left ventricle textual definition +WARN missing_definition myocardium of anterior wall of left ventricle textual definition +WARN missing_definition myocardium of anterior wall of right ventricle textual definition +WARN missing_definition vasculature of spleen textual definition +WARN missing_definition vasculature of central nervous system plus retina textual definition +WARN missing_definition vasculature of central nervous system textual definition +WARN missing_definition wall of gallbladder textual definition +WARN missing_definition wall of brachiocephalic artery textual definition +WARN missing_definition wall of subclavian artery textual definition +WARN missing_definition wall of anal canal textual definition +WARN missing_definition wall of pulmonary artery textual definition +WARN missing_definition wall of synovial tendon sheath textual definition +WARN missing_definition wall of eyeball textual definition +WARN missing_definition wall of orbit textual definition +WARN missing_definition wall of common carotid artery textual definition +WARN missing_definition sigmoid vein textual definition +WARN missing_definition pancreatic artery textual definition +WARN missing_definition axial vasculature textual definition +WARN missing_definition panarthropod head textual definition +WARN missing_definition electric current unit textual definition +WARN missing_definition temperature unit textual definition +WARN missing_definition substance unit textual definition +WARN missing_definition luminous intensity unit textual definition +WARN missing_definition ampere textual definition +WARN missing_definition kelvin textual definition +WARN missing_definition mole textual definition +WARN missing_definition candela textual definition +WARN missing_definition picometer textual definition +WARN missing_definition femtogram textual definition +WARN missing_definition millisecond textual definition +WARN missing_definition microsecond textual definition +WARN missing_definition picosecond textual definition +WARN missing_definition milliampere textual definition +WARN missing_definition microampere textual definition +WARN missing_definition millimole textual definition +WARN missing_definition femtomole textual definition +WARN missing_definition attomole textual definition +WARN missing_definition base unit textual definition +WARN missing_definition area unit textual definition +WARN missing_definition acceleration unit textual definition +WARN missing_definition angular velocity unit textual definition +WARN missing_definition angular acceleration unit textual definition +WARN missing_definition concentration unit textual definition +WARN missing_definition mass density unit textual definition +WARN missing_definition luminance unit textual definition +WARN missing_definition area density unit textual definition +WARN missing_definition molar mass unit textual definition +WARN missing_definition molar volume unit textual definition +WARN missing_definition momentum unit textual definition +WARN missing_definition rotational frequency unit textual definition +WARN missing_definition specific volume unit textual definition +WARN missing_definition speed/velocity unit textual definition +WARN missing_definition unit of molarity textual definition +WARN missing_definition unit of molality textual definition +WARN missing_definition molal textual definition +WARN missing_definition millimolal textual definition +WARN missing_definition micromolal textual definition +WARN missing_definition nanomolal textual definition +WARN missing_definition picomolal textual definition +WARN missing_definition femtomolar textual definition +WARN missing_definition unit of normality textual definition +WARN missing_definition normal textual definition +WARN missing_definition mole fraction textual definition +WARN missing_definition meter per second per second textual definition +WARN missing_definition radian per second per second textual definition +WARN missing_definition radian per second textual definition +WARN missing_definition square meter textual definition +WARN missing_definition square centimeter textual definition +WARN missing_definition square millimeter textual definition +WARN missing_definition kilogram per cubic meter textual definition +WARN missing_definition gram per cubic centimeter textual definition +WARN missing_definition candela per square meter textual definition +WARN missing_definition kilogram per square meter textual definition +WARN missing_definition kilogram per mole textual definition +WARN missing_definition gram per mole textual definition +WARN missing_definition cubic meter per mole textual definition +WARN missing_definition cubic centimeter per mole textual definition +WARN missing_definition kilogram meter per second textual definition +WARN missing_definition turns per second textual definition +WARN missing_definition cubic meter per kilogram textual definition +WARN missing_definition meter per second textual definition +WARN missing_definition volume unit textual definition +WARN missing_definition cubic meter textual definition +WARN missing_definition femtoliter textual definition +WARN missing_definition frequency unit textual definition +WARN missing_definition force unit textual definition +WARN missing_definition newton textual definition +WARN missing_definition pressure unit textual definition +WARN missing_definition pascal textual definition +WARN missing_definition energy unit textual definition +WARN missing_definition joule textual definition +WARN missing_definition power unit textual definition +WARN missing_definition watt textual definition +WARN missing_definition illuminance unit textual definition +WARN missing_definition lux textual definition +WARN missing_definition luminous flux unit textual definition +WARN missing_definition lumen textual definition +WARN missing_definition catalytic activity unit textual definition +WARN missing_definition katal textual definition +WARN missing_definition angle unit textual definition +WARN missing_definition plane angle unit textual definition +WARN missing_definition radian textual definition +WARN missing_definition solid angle unit textual definition +WARN missing_definition steradian textual definition +WARN missing_definition activity (of a radionuclide) unit textual definition +WARN missing_definition dose equivalent unit textual definition +WARN missing_definition exposure unit textual definition +WARN missing_definition becquerel textual definition +WARN missing_definition curie textual definition +WARN missing_definition gray textual definition +WARN missing_definition rad textual definition +WARN missing_definition roentgen textual definition +WARN missing_definition sievert textual definition +WARN missing_definition millisievert textual definition +WARN missing_definition microsievert textual definition +WARN missing_definition Roentgen equivalent man textual definition +WARN missing_definition microgray textual definition +WARN missing_definition milligray textual definition +WARN missing_definition nanogray textual definition +WARN missing_definition nanosievert textual definition +WARN missing_definition millicurie textual definition +WARN missing_definition microcurie textual definition +WARN missing_definition disintegrations per minute textual definition +WARN missing_definition counts per minute textual definition +WARN missing_definition nanosecond textual definition +WARN missing_definition century textual definition +WARN missing_definition half life textual definition +WARN missing_definition foot candle textual definition +WARN missing_definition irradiance unit textual definition +WARN missing_definition watt per square meter textual definition +WARN missing_definition einstein per square meter per second textual definition +WARN missing_definition light unit textual definition +WARN missing_definition watt per steradian per square meter textual definition +WARN missing_definition radiant intensity unit textual definition +WARN missing_definition microeinstein per square meter per second textual definition +WARN missing_definition radiance unit textual definition +WARN missing_definition watt per steradian textual definition +WARN missing_definition parts per notation unit textual definition +WARN missing_definition parts per hundred textual definition +WARN missing_definition parts per thousand textual definition +WARN missing_definition parts per million textual definition +WARN missing_definition parts per billion textual definition +WARN missing_definition parts per trillion textual definition +WARN missing_definition parts per quadrillion textual definition +WARN missing_definition gram per milliliter textual definition +WARN missing_definition kilogram per liter textual definition +WARN missing_definition unit per volume unit textual definition +WARN missing_definition unit per milliliter textual definition +WARN missing_definition unit per liter textual definition +WARN missing_definition mass per unit volume textual definition +WARN missing_definition enzyme unit textual definition +WARN missing_definition density unit textual definition +WARN missing_definition linear density unit textual definition +WARN missing_definition kilogram per meter textual definition +WARN missing_definition degree textual definition +WARN missing_definition dimensionless unit textual definition +WARN missing_definition percent textual definition +WARN missing_definition pi textual definition +WARN missing_definition count unit textual definition +WARN missing_definition ratio unit textual definition +WARN missing_definition fraction textual definition +WARN missing_definition molecule count textual definition +WARN missing_definition purity percentage textual definition +WARN missing_definition confluence percentage textual definition +WARN missing_definition liter per kilogram textual definition +WARN missing_definition milliliter per kilogram textual definition +WARN missing_definition microliter per kilogram textual definition +WARN missing_definition cell concentration unit textual definition +WARN missing_definition cells per milliliter textual definition +WARN missing_definition catalytic (activity) concentration unit textual definition +WARN missing_definition katal per cubic meter textual definition +WARN missing_definition katal per liter textual definition +WARN missing_definition volume per unit volume textual definition +WARN missing_definition milliliter per cubic meter textual definition +WARN missing_definition deciliter textual definition +WARN missing_definition colony forming unit textual definition +WARN missing_definition plaque forming unit textual definition +WARN missing_definition colony forming unit per milliliter textual definition +WARN missing_definition plaque forming unit per volume textual definition +WARN missing_definition plaque forming unit per milliliter textual definition +WARN missing_definition disintegrations per second textual definition +WARN missing_definition electric potential difference unit textual definition +WARN missing_definition volt textual definition +WARN missing_definition electric charge textual definition +WARN missing_definition coulomb textual definition +WARN missing_definition dalton textual definition +WARN missing_definition kilodalton textual definition +WARN missing_definition watt-hour textual definition +WARN missing_definition kilowatt-hour textual definition +WARN missing_definition magnetic flux unit textual definition +WARN missing_definition weber textual definition +WARN missing_definition magnetic flux density unit textual definition +WARN missing_definition tesla textual definition +WARN missing_definition volt-hour textual definition +WARN missing_definition kilovolt-hour textual definition +WARN missing_definition information unit textual definition +WARN missing_definition bit textual definition +WARN missing_definition byte textual definition +WARN missing_definition kilobyte textual definition +WARN missing_definition megabyte textual definition +WARN missing_definition image resolution unit textual definition +WARN missing_definition chroma sampling unit textual definition +WARN missing_definition dynamic range unit textual definition +WARN missing_definition spatial resolution unit textual definition +WARN missing_definition dots per inch textual definition +WARN missing_definition micron pixel textual definition +WARN missing_definition pixels per inch textual definition +WARN missing_definition pixels per millimeter textual definition +WARN missing_definition base pair textual definition +WARN missing_definition kibibyte textual definition +WARN missing_definition mebibyte textual definition +WARN missing_definition millivolt textual definition +WARN missing_definition kilovolt textual definition +WARN missing_definition microvolt textual definition +WARN missing_definition nanovolt textual definition +WARN missing_definition picovolt textual definition +WARN missing_definition megavolt textual definition +WARN missing_definition surface tension unit textual definition +WARN missing_definition newton per meter textual definition +WARN missing_definition dyne per cm textual definition +WARN missing_definition viscosity unit textual definition +WARN missing_definition pascal second textual definition +WARN missing_definition poise textual definition +WARN missing_definition decibel textual definition +WARN missing_definition effective dose unit textual definition +WARN missing_definition conduction unit textual definition +WARN missing_definition electrical conduction unit textual definition +WARN missing_definition heat conduction unit textual definition +WARN missing_definition siemens textual definition +WARN missing_definition watt per meter kelvin textual definition +WARN missing_definition electronvolt textual definition +WARN missing_definition electric field strength unit textual definition +WARN missing_definition volt per meter textual definition +WARN missing_definition absorbance unit textual definition +WARN missing_definition volumetric flow rate unit textual definition +WARN missing_definition millimetres of mercury textual definition +WARN missing_definition milligram per liter textual definition +WARN missing_definition microgram per milliliter textual definition +WARN missing_definition nanogram per milliliter textual definition +WARN missing_definition milliunits per milliliter textual definition +WARN missing_definition rate unit textual definition +WARN missing_definition kilogram per hectare textual definition +WARN missing_definition giga textual definition +WARN missing_definition mega textual definition +WARN missing_definition kilo textual definition +WARN missing_definition deci textual definition +WARN missing_definition milli textual definition +WARN missing_definition centi textual definition +WARN missing_definition micro textual definition +WARN missing_definition nano textual definition +WARN missing_definition pico textual definition +WARN missing_definition femto textual definition +WARN missing_definition atto textual definition +WARN missing_definition dose unit textual definition +WARN missing_definition milligram per kilogram textual definition +WARN missing_definition milligram per square meter textual definition +WARN missing_definition dosage unit textual definition +WARN missing_definition milligram per kilogram per day textual definition +WARN missing_definition relative light unit textual definition +WARN missing_definition relative luminescence unit textual definition +WARN missing_definition relative fluorescence unit textual definition +WARN missing_definition megaHertz textual definition +WARN missing_definition centiMorgan textual definition +WARN missing_definition centiRay textual definition +WARN missing_definition mega base pair textual definition +WARN missing_definition giga base pair textual definition +WARN missing_definition square micrometer textual definition +WARN missing_definition millisiemens textual definition +WARN missing_definition micromole per litre textual definition +WARN missing_definition micromole per kilogram textual definition +WARN missing_definition millimeters per day textual definition +WARN missing_definition kilometer per hour textual definition +WARN missing_definition milli textual definition +WARN missing_definition hectare textual definition +WARN missing_definition inch textual definition +WARN missing_definition thou textual definition +WARN missing_definition foot textual definition +WARN missing_definition yard textual definition +WARN missing_definition chain textual definition +WARN missing_definition furlong textual definition +WARN missing_definition mile textual definition +WARN missing_definition league textual definition +WARN missing_definition maritime length unit textual definition +WARN missing_definition fathom textual definition +WARN missing_definition cable textual definition +WARN missing_definition nautical mile textual definition +WARN missing_definition perch textual definition +WARN missing_definition rood textual definition +WARN missing_definition acre textual definition +WARN missing_definition fluid ounce textual definition +WARN missing_definition gill textual definition +WARN missing_definition pint textual definition +WARN missing_definition quart textual definition +WARN missing_definition gallon textual definition +WARN missing_definition grain textual definition +WARN missing_definition drachm textual definition +WARN missing_definition ounce textual definition +WARN missing_definition pound textual definition +WARN missing_definition stone textual definition +WARN missing_definition quarter textual definition +WARN missing_definition hundredweight textual definition +WARN missing_definition ton textual definition +WARN missing_definition slug textual definition +WARN missing_definition teaspoon textual definition +WARN missing_definition micromole textual definition +WARN missing_definition gram per square meter textual definition +WARN missing_definition nanogram per microliter textual definition +WARN missing_definition large calorie textual definition +WARN missing_definition micrograms per wheaton bottle textual definition +WARN missing_definition picoampere textual definition +WARN missing_definition centigray textual definition +WARN missing_definition gigaelectronvolt textual definition +WARN missing_definition gigaelectronvolt per nucleon textual definition +WARN missing_definition megaelectronvolt per nucleon textual definition +WARN missing_definition kiloelectronvolt per micron textual definition +WARN missing_definition gray per minute textual definition +WARN missing_definition centigray per minute textual definition +WARN missing_definition milligray per minute textual definition +WARN missing_definition milligray per day textual definition +WARN missing_definition milligray per hour textual definition +WARN missing_definition milligray per second textual definition +WARN missing_definition kilometer textual definition +WARN missing_definition milligram per deciliter textual definition +WARN missing_definition microgram per deciliter textual definition +WARN missing_definition meter based unit textual definition +WARN missing_definition second based unit textual definition +WARN missing_definition ampere based unit textual definition +WARN missing_definition kelvin based unit textual definition +WARN missing_definition mole based unit textual definition +WARN missing_definition candela based unit textual definition +WARN missing_definition angstrom based unit textual definition +WARN missing_definition gram based unit textual definition +WARN missing_definition degree Celsius based unit textual definition +WARN missing_definition minute based unit textual definition +WARN missing_definition hour based unit textual definition +WARN missing_definition day based unit textual definition +WARN missing_definition week based unit textual definition +WARN missing_definition month based unit textual definition +WARN missing_definition year based unit textual definition +WARN missing_definition molar based unit textual definition +WARN missing_definition molal based unit textual definition +WARN missing_definition normal based unit textual definition +WARN missing_definition mole fraction based unit textual definition +WARN missing_definition meter per second per second based unit textual definition +WARN missing_definition radian per second per second based unit textual definition +WARN missing_definition radian per second based unit textual definition +WARN missing_definition square meter based unit textual definition +WARN missing_definition square centimeter based unit textual definition +WARN missing_definition square millimeter based unit textual definition +WARN missing_definition gram per cubic centimeter based unit textual definition +WARN missing_definition candela per square meter based unit textual definition +WARN missing_definition gram per mole based unit textual definition +WARN missing_definition cubic meter per mole based unit textual definition +WARN missing_definition cubic centimeter per mole based unit textual definition +WARN missing_definition turns per second based unit textual definition +WARN missing_definition cubic meter per kilogram based unit textual definition +WARN missing_definition meter per second based unit textual definition +WARN missing_definition cubic meter based unit textual definition +WARN missing_definition cubic centimeter based unit textual definition +WARN missing_definition liter based unit textual definition +WARN missing_definition cubic decimeter based unit textual definition +WARN missing_definition hertz based unit textual definition +WARN missing_definition newton based unit textual definition +WARN missing_definition pascal based unit textual definition +WARN missing_definition joule based unit textual definition +WARN missing_definition watt based unit textual definition +WARN missing_definition lux based unit textual definition +WARN missing_definition lumen based unit textual definition +WARN missing_definition katal based unit textual definition +WARN missing_definition radian based unit textual definition +WARN missing_definition steradian based unit textual definition +WARN missing_definition becquerel based unit textual definition +WARN missing_definition curie based unit textual definition +WARN missing_definition gray based unit textual definition +WARN missing_definition rad based unit textual definition +WARN missing_definition roentgen based unit textual definition +WARN missing_definition sievert based unit textual definition +WARN missing_definition Roentgen equivalent man based unit textual definition +WARN missing_definition disintegrations per minute based unit textual definition +WARN missing_definition counts per minute based unit textual definition +WARN missing_definition century based unit textual definition +WARN missing_definition half life based unit textual definition +WARN missing_definition foot candle based unit textual definition +WARN missing_definition watt per square meter based unit textual definition +WARN missing_definition einstein per square meter per second based unit textual definition +WARN missing_definition watt per steradian per square meter based unit textual definition +WARN missing_definition watt per steradian based unit textual definition +WARN missing_definition mass percentage based unit textual definition +WARN missing_definition mass volume percentage based unit textual definition +WARN missing_definition volume percentage based unit textual definition +WARN missing_definition parts per hundred based unit textual definition +WARN missing_definition parts per thousand based unit textual definition +WARN missing_definition parts per million based unit textual definition +WARN missing_definition parts per billion based unit textual definition +WARN missing_definition parts per trillion based unit textual definition +WARN missing_definition parts per quadrillion based unit textual definition +WARN missing_definition gram per milliliter based unit textual definition +WARN missing_definition gram per liter based unit textual definition +WARN missing_definition unit per milliliter based unit textual definition +WARN missing_definition unit per liter based unit textual definition +WARN missing_definition mass per unit volume based unit textual definition +WARN missing_definition enzyme unit based unit textual definition +WARN missing_definition degree based unit textual definition +WARN missing_definition pi based unit textual definition +WARN missing_definition molecule count based unit textual definition +WARN missing_definition purity percentage based unit textual definition +WARN missing_definition confluence percentage based unit textual definition +WARN missing_definition degree Fahrenheit based unit textual definition +WARN missing_definition pH based unit textual definition +WARN missing_definition liter per kilogram based unit textual definition +WARN missing_definition cells per milliliter based unit textual definition +WARN missing_definition katal per cubic meter based unit textual definition +WARN missing_definition katal per liter based unit textual definition +WARN missing_definition gram per deciliter based unit textual definition +WARN missing_definition colony forming unit based unit textual definition +WARN missing_definition plaque forming unit based unit textual definition +WARN missing_definition colony forming unit per milliliter based unit textual definition +WARN missing_definition plaque forming unit per milliliter based unit textual definition +WARN missing_definition disintegrations per second based unit textual definition +WARN missing_definition volt based unit textual definition +WARN missing_definition coulomb based unit textual definition +WARN missing_definition dalton based unit textual definition +WARN missing_definition watt-hour based unit textual definition +WARN missing_definition weber based unit textual definition +WARN missing_definition tesla based unit textual definition +WARN missing_definition volt-hour based unit textual definition +WARN missing_definition bit based unit textual definition +WARN missing_definition byte based unit textual definition +WARN missing_definition chroma sampling unit based unit textual definition +WARN missing_definition dynamic range unit based unit textual definition +WARN missing_definition dots per inch based unit textual definition +WARN missing_definition pixels per inch based unit textual definition +WARN missing_definition pixels per millimeter based unit textual definition +WARN missing_definition base pair based unit textual definition +WARN missing_definition kibibyte based unit textual definition +WARN missing_definition mebibyte based unit textual definition +WARN missing_definition newton per meter based unit textual definition +WARN missing_definition dyne per cm based unit textual definition +WARN missing_definition pascal second based unit textual definition +WARN missing_definition poise based unit textual definition +WARN missing_definition effective dose unit based unit textual definition +WARN missing_definition siemens based unit textual definition +WARN missing_definition watt per meter kelvin based unit textual definition +WARN missing_definition electronvolt based unit textual definition +WARN missing_definition volt per meter based unit textual definition +WARN missing_definition absorbance unit based unit textual definition +WARN missing_definition count per nanomolar second based unit textual definition +WARN missing_definition count per molar second based unit textual definition +WARN missing_definition count per nanomolar based unit textual definition +WARN missing_definition count per molar based unit textual definition +WARN missing_definition dosage unit based unit textual definition +WARN missing_definition relative light unit based unit textual definition +WARN missing_definition relative luminescence unit based unit textual definition +WARN missing_definition relative fluorescence unit based unit textual definition +WARN missing_definition square micrometer based unit textual definition +WARN missing_definition hectare based unit textual definition +WARN missing_definition inch based unit textual definition +WARN missing_definition thou based unit textual definition +WARN missing_definition foot based unit textual definition +WARN missing_definition yard based unit textual definition +WARN missing_definition chain based unit textual definition +WARN missing_definition furlong based unit textual definition +WARN missing_definition mile based unit textual definition +WARN missing_definition league based unit textual definition +WARN missing_definition maritime length unit based unit textual definition +WARN missing_definition fathom based unit textual definition +WARN missing_definition cable based unit textual definition +WARN missing_definition nautical mile based unit textual definition +WARN missing_definition perch based unit textual definition +WARN missing_definition rood based unit textual definition +WARN missing_definition acre based unit textual definition +WARN missing_definition fluid ounce based unit textual definition +WARN missing_definition gill based unit textual definition +WARN missing_definition pint based unit textual definition +WARN missing_definition quart based unit textual definition +WARN missing_definition gallon based unit textual definition +WARN missing_definition grain based unit textual definition +WARN missing_definition drachm based unit textual definition +WARN missing_definition ounce based unit textual definition +WARN missing_definition pound based unit textual definition +WARN missing_definition stone based unit textual definition +WARN missing_definition quarter based unit textual definition +WARN missing_definition hundredweight based unit textual definition +WARN missing_definition ton based unit textual definition +WARN missing_definition slug based unit textual definition +WARN missing_definition teaspoon based unit textual definition +WARN missing_definition gram per square meter based unit textual definition +WARN missing_definition large calorie based unit textual definition +WARN missing_definition gray per minute based unit textual definition +WARN missing_definition has parent hydride textual definition +WARN missing_definition is conjugate acid of textual definition +WARN missing_definition is conjugate base of textual definition +WARN missing_definition is substituent group from textual definition +WARN missing_definition is tautomer of textual definition +WARN missing_definition channel for textual definition +WARN missing_definition channels_from textual definition +WARN missing_definition channels_into textual definition +WARN missing_definition layer part of textual definition +WARN missing_definition protects textual definition +WARN missing_definition subdivision of textual definition +WARN missing_definition creator textual definition +WARN missing_definition Date textual definition +WARN missing_definition Description textual definition +WARN missing_definition Title textual definition +WARN missing_definition license textual definition +WARN missing_definition http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled textual definition +WARN missing_definition Mus musculus subspecies textual definition +WARN missing_definition created_by textual definition +WARN missing_definition creation date textual definition +WARN missing_definition has_alternative_id textual definition +WARN missing_definition database_cross_reference textual definition +WARN missing_definition has_obo_namespace textual definition +WARN missing_definition has_related_synonym textual definition +WARN missing_definition in_subset textual definition +WARN missing_definition xsd:boolean textual definition +WARN missing_definition xsd:string textual definition +WARN missing_subset_declaration obo:doid#DO_AGR_slim rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#DO_CFDE_slim rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#DO_FlyBase_slim rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#DO_GXD_slim rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#DO_MGI_slim rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#DO_RAD_slim rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#DO_cancer_slim rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#DO_rare_slim rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#NCIthesaurus rdfs:subPropertyOf +WARN missing_subset_declaration obo:doid#TopNodes_DOcancerslim rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_subset_declaration blank node rdfs:subPropertyOf +WARN missing_synonymtype_declaration OMO:0003000 rdfs:subPropertyOf +WARN missing_synonymtype_declaration OMO:0003002 rdfs:subPropertyOf +WARN missing_synonymtype_declaration OMO:0003003 rdfs:subPropertyOf +WARN missing_synonymtype_declaration OMO:0003004 rdfs:subPropertyOf +WARN missing_synonymtype_declaration OMO:0003011 rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:bspo#vertebrate rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:chebi#INN rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:chebi#IUPAC_NAME rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:go#syngo_official_label rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:go#systematic_synonym rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#blast_name rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#common_name rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#equivalent_name rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#genbank_common_name rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#in_part rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#misnomer rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#misspelling rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#scientific_name rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon#synonym rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon/subsets/taxslim#blast_name rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon/subsets/taxslim#common_name rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon/subsets/taxslim#genbank_common_name rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:ncbitaxon/subsets/taxslim#synonym rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:po#Japanese rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:po#Plural rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:po#Spanish rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:pr#Gene-based rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:pr#PRO-short-label rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:uberon/core#DEPRECATED rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:uberon/core#HUMAN_PREFERRED rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:uberon/core#INCONSISTENT rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:uberon/core#PENDING_REVIEW rdfs:subPropertyOf +WARN missing_synonymtype_declaration obo:uberon/core#SENSU rdfs:subPropertyOf +WARN multiple_equivalent_classes response to light stimulus owl:equivalentClass blank node +WARN multiple_equivalent_classes response to organic substance owl:equivalentClass blank node +WARN multiple_equivalent_classes response to inorganic substance owl:equivalentClass blank node +WARN multiple_equivalent_classes response to organonitrogen compound owl:equivalentClass blank node +WARN multiple_equivalent_classes response to organic cyclic compound owl:equivalentClass blank node +WARN multiple_equivalent_classes RNA biosynthetic process owl:equivalentClass blank node +WARN multiple_equivalent_classes response to chemical owl:equivalentClass blank node +WARN multiple_equivalent_classes response to amino acid owl:equivalentClass blank node +WARN multiple_equivalent_classes membrane biogenesis owl:equivalentClass blank node +WARN multiple_equivalent_classes response to carbamate owl:equivalentClass blank node +WARN multiple_equivalent_classes response to ammonium ion owl:equivalentClass blank node +WARN multiple_equivalent_classes nuclear membrane biogenesis owl:equivalentClass blank node +WARN multiple_equivalent_classes catalytic activity, acting on a protein owl:equivalentClass blank node +WARN multiple_equivalent_classes catalytic activity, acting on RNA owl:equivalentClass blank node +WARN multiple_equivalent_classes catalytic activity, acting on a nucleic acid owl:equivalentClass blank node +WARN multiple_equivalent_classes response to peptide owl:equivalentClass blank node +WARN multiple_equivalent_classes response to nitrogen compound owl:equivalentClass blank node +WARN multiple_equivalent_classes response to oxygen-containing compound owl:equivalentClass blank node +WARN multiple_equivalent_classes obsolescence reason specification owl:equivalentClass blank node +INFO lowercase_definition independent continuant textual definition b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002]) +INFO lowercase_definition independent continuant textual definition b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])@en +INFO lowercase_definition process textual definition p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])@en +INFO lowercase_definition disposition IAO:0000600 b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])@en +INFO lowercase_definition quality IAO:0000600 a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])@en +INFO lowercase_definition specifically dependent continuant textual definition b is a relational specifically dependent continuant = Def. b is a specifically dependent continuant and there are n > 1 independent continuants c1, … cn which are not spatial regions are such that for all 1 i < j n, ci and cj share no common parts, are such that for each 1 i n, b s-depends_on ci at every time t during the course of b’s existence (axiom label in BFO2 Reference: [131-004])@en +INFO lowercase_definition specifically dependent continuant textual definition b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])@en +INFO lowercase_definition role IAO:0000600 b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])@en +INFO lowercase_definition object aggregate IAO:0000600 b is an object aggregate means: b is a material entity consisting exactly of a plurality of objects as member_parts at all times at which b exists. (axiom label in BFO2 Reference: [025-004])@en +INFO lowercase_definition generically dependent continuant textual definition b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])@en INFO lowercase_definition part_of textual definition a core relation that holds between a part and its whole@en INFO lowercase_definition has_part textual definition a core relation that holds between a whole and its part@en -INFO lowercase_definition realized in IAO:0000600 <[copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])@en> -INFO lowercase_definition realizes IAO:0000600 -INFO lowercase_definition preceded by textual definition -INFO lowercase_definition precedes textual definition +INFO lowercase_definition realized in IAO:0000600 [copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])@en +INFO lowercase_definition realizes IAO:0000600 to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])@en +INFO lowercase_definition preceded by textual definition x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.@en +INFO lowercase_definition precedes textual definition x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.@en INFO lowercase_definition occurs in textual definition b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t@en INFO lowercase_definition contains process textual definition [copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t@en -INFO lowercase_definition continuant fiat boundary textual definition +INFO lowercase_definition continuant fiat boundary textual definition b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001])@en INFO lowercase_definition anterior to textual definition x anterior to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. INFO lowercase_definition dorsal to textual definition x dorsal to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). INFO lowercase_definition posterior to textual definition x posterior to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. @@ -3037,39 +3151,38 @@ INFO lowercase_definition in distal side of textual definition x in distal side INFO lowercase_definition immediately deep to textual definition x immediately deep to y iff x deep_to y and x is contiguous with y. INFO lowercase_definition immediately superficial to textual definition x immediately superficial to y iff x superficial to y and x is contiguous with y. INFO lowercase_definition lipid textual definition 'Lipids' is a loosely defined term for substances of biological origin that are soluble in nonpolar solvents. They consist of saponifiable lipids, such as glycerides (fats and oils) and phospholipids, as well as nonsaponifiable lipids, principally steroids. -INFO lowercase_definition catecholamine textual definition 4-(2-Aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution. INFO lowercase_definition partially_surrounded_by textual definition x partially_surrounded_by y if and only if (1) x is adjacent to y and for the region r that is adjacent to x, r partially overlaps y (2) the shared boundary between x and y occupies a non-trivial proportion of the outermost boundary of x INFO lowercase_definition ore textual definition a type of rock that contains sufficient minerals with important elements including metals that can be economically extracted from the rock. INFO lowercase_definition nuclear energy textual definition potential energy that binds nucleons to form the atomic nucleus (and nuclear reactions). INFO lowercase_definition data item textual definition a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.@en -INFO lowercase_definition definition source textual definition +INFO lowercase_definition definition source textual definition formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007@en INFO lowercase_definition is quality measurement of textual definition m is a quality measurement of q at t. When q is a quality, there is a measurement process p that has specified output m, a measurement datum, that is about q@en INFO lowercase_definition is quality measured as textual definition inverse of the relation of is quality measurement of@en -INFO lowercase_definition behavior process textual definition "<\""The action, reaction, or performance of an organism in response to external or internal stimuli.\"" [GO:GO\:0007610]>" +INFO lowercase_definition behavior process textual definition "\""The action, reaction, or performance of an organism in response to external or internal stimuli.\"" [GO:GO\:0007610]" INFO lowercase_definition kinesthetic behavior textual definition "\""Movement behavior of the body or its parts.\""" -INFO lowercase_definition regulation of behavior textual definition "<\""Any process that modulates the frequency, rate or extent of behavior, the specific actions or reactions of an organism in response to external or internal stimuli.\"" [GO:0050795]>" +INFO lowercase_definition regulation of behavior textual definition "\""Any process that modulates the frequency, rate or extent of behavior, the specific actions or reactions of an organism in response to external or internal stimuli.\"" [GO:0050795]" INFO lowercase_definition regulator role textual definition a regulatory role involved with making and/or enforcing relevant legislation and governmental orders@en INFO lowercase_definition regulatory role textual definition a role which inheres in material entities and is realized in the processes of making, enforcing or being defined by legislation or orders issued by a governmental body.@en INFO lowercase_definition material supplier role textual definition a role realized through the process of supplying materials such as animal subjects, reagents or other materials used in an investigation.@en INFO lowercase_definition specimen role textual definition a role borne by a material entity that is gained during a specimen collection process and that can be realized by use of the specimen in an investigation@en INFO lowercase_definition population textual definition a population is a collection of individuals from the same taxonomic class living, counted or sampled at a particular site or in a particular area@en INFO lowercase_definition protocol textual definition a protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process. -INFO lowercase_definition zip textual definition -INFO lowercase_definition tar textual definition +INFO lowercase_definition zip textual definition zip is a format standard of a digital entity that is conformant with the PKWARE .ZIP file format specification (http://www.pkware.com/index.php?option=com_content&task=view&id=59&Itemid=103/)@en +INFO lowercase_definition tar textual definition tar is a format standard of a digital entity that is conformant with the tape archive file format as standardized by POSIX.1-1998, POSIX.1-2001, or any other tar format compliant with the GNU tar specification. (http://www.gnu.org/software/tar/manual/)@en INFO lowercase_definition material transformation objective textual definition an objective specifiction that creates an specific output object from input materials.@en INFO lowercase_definition manufacturing objective textual definition is the objective to manufacture a material of a certain function (device)@en INFO lowercase_definition GenePattern software textual definition a software that provides access to more than 100 tools for gene expression analysis, proteomics, SNP analysis and common data processing tasks. INFO lowercase_definition service provider role textual definition is a role which inheres in a person or organization and is realized in in a planned process which provides access to training, materials or execution of protocols for an organization or person -INFO lowercase_definition leave one out cross validation method textual definition +INFO lowercase_definition leave one out cross validation method textual definition is a data transformation : leave-one-out cross-validation (LOOCV) involves using a single observation from the original sample as the validation data, and the remaining observations as the training data. This is repeated such that each observation in the sample is used once as the validation data INFO lowercase_definition spacecraft module textual definition a self-contained unit of a spacecraft INFO lowercase_definition gamma radiation textual definition electromagnetic radiation with photon energies greater than approximately 100 keV -INFO lowercase_definition Gammacell 40 textual definition -INFO lowercase_definition RARAF 5.5 MV microbeam textual definition -INFO lowercase_definition Swift HALE textual definition -INFO lowercase_definition ER-2 textual definition -INFO lowercase_definition WB-57 textual definition -INFO lowercase_definition Faxitron CP160 textual definition -INFO lowercase_definition X-Rad320 textual definition +INFO lowercase_definition Gammacell 40 textual definition http://www.theratronics.ca/PDFs/GC40_BTMB_8008GC40E_2_v112013_webSECURE.pdf +INFO lowercase_definition RARAF 5.5 MV microbeam textual definition https://www.crr.columbia.edu/services/ion-beam-and-neutron-core-facility +INFO lowercase_definition Swift HALE textual definition https://www.nasa.gov/feature/ames/nasa-small-business-partnership-prepares-drone-for-30-day-science-flights +INFO lowercase_definition ER-2 textual definition https://www.nasa.gov/centers/armstrong/aircraft/ER-2/index.html +INFO lowercase_definition WB-57 textual definition https://airbornescience.nasa.gov/aircraft/WB-57_-_JSC +INFO lowercase_definition Faxitron CP160 textual definition doi: 10.2349/biij.2.1.e1 +INFO lowercase_definition X-Rad320 textual definition https://precisionxray.com/x-rad/xrad-320/ INFO lowercase_definition inheres in textual definition a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence.@en INFO lowercase_definition inheres in textual definition a relation between a specifically dependent continuant (the dependent) and an independent continuant (the bearer), in which the dependent specifically depends on the bearer for its existence@en INFO lowercase_definition bearer of textual definition a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence@en @@ -3096,7 +3209,7 @@ INFO lowercase_definition synapsed to textual definition " Relation between a ne INFO lowercase_definition overlaps textual definition x overlaps y if and only if there exists some z such that x has part z and z part of y INFO lowercase_definition overlaps textual definition x overlaps y iff they have some part in common. INFO lowercase_definition only in taxon textual definition x only in taxon y if and only if x is in taxon y, and there is no other organism z such that y!=z a and x is in taxon z. -INFO lowercase_definition in taxon textual definition +INFO lowercase_definition in taxon textual definition x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed. INFO lowercase_definition connected to textual definition a is connected to b if and only if a and b are discrete structure, and there exists some connecting structure c, such that c connects a and b INFO lowercase_definition connects textual definition c connects a if and only if there exist some b such that a and b are similar parts of the same system, and c connects b, specifically, c connects a with b. When one structure connects two others it unites some aspect of the function or role they play within the system. INFO lowercase_definition attached to part of textual definition a is attached to part of b if a is attached to b, or a is attached to some p, where p is part of b. @@ -3105,7 +3218,7 @@ INFO lowercase_definition develops from textual definition x develops from y if INFO lowercase_definition develops into textual definition inverse of develops from INFO lowercase_definition directly develops into textual definition inverse of directly develops from INFO lowercase_definition regulates (processual) textual definition p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. -INFO lowercase_definition regulates (processual) textual definition +INFO lowercase_definition regulates (processual) textual definition process(P1) regulates process(P2) iff: P1 results in the initiation or termination of P2 OR affects the frequency of its initiation or termination OR affects the magnitude or rate of output of P2. INFO lowercase_definition negatively regulates textual definition p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. INFO lowercase_definition positively regulates textual definition p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q. INFO lowercase_definition capable of part of textual definition c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p. @@ -3113,26 +3226,26 @@ INFO lowercase_definition surrounded by textual definition x surrounded_by y if INFO lowercase_definition adjacent to textual definition x adjacent to y if and only if x and y share a boundary. INFO lowercase_definition surrounds textual definition inverse of surrounded by INFO lowercase_definition starts textual definition inverse of starts with -INFO lowercase_definition starts with textual definition +INFO lowercase_definition starts with textual definition x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. INFO lowercase_definition develops from part of textual definition x develops from part of y if and only if there exists some z such that x develops from z and z is part of y INFO lowercase_definition develops in textual definition x develops_in y if x is located in y whilst x is developing INFO lowercase_definition ends textual definition inverse of ends with -INFO lowercase_definition ends with textual definition α(x) ∧ ω(y) = ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.> +INFO lowercase_definition ends with textual definition x ends with y if and only if x has part y and the time point at which x ends is equivalent to the time point at which y ends. Formally: α(y) > α(x) ∧ ω(y) = ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. INFO lowercase_definition has start location textual definition x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y INFO lowercase_definition has end location textual definition x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y -INFO lowercase_definition has input textual definition

+INFO lowercase_definition has input textual definition p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p. INFO lowercase_definition has output textual definition p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p. INFO lowercase_definition connecting branch of textual definition b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. INFO lowercase_definition has connecting branch textual definition inverse of connecting branch of INFO lowercase_definition has developmental contribution from textual definition x has developmental contribution from y iff x has some part z such that z develops from y@en INFO lowercase_definition developmentally contributes to textual definition inverse of has developmental contribution from -INFO lowercase_definition developmentally induced by textual definition +INFO lowercase_definition developmentally induced by textual definition t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor material anatomical entity type T to T', where T' develops_from T INFO lowercase_definition acts upstream of textual definition c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes. INFO lowercase_definition acts upstream of or within textual definition c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process. INFO lowercase_definition developmentally replaces textual definition x developmentally replaces y if and only if there is some developmental process that causes x to move or to cease to exist, and for the site that was occupied by x to become occupied by y, where y either comes into existence in this site or moves to this site from somewhere else INFO lowercase_definition results in developmental progression of textual definition p results in the developmental progression of s iff p is a developmental process and s is an anatomical entity and p causes s to undergo a change in state at some point along its natural developmental cycle (this cycle starts with its formation, through the mature structure, and ends with its loss). INFO lowercase_definition results in development of textual definition p 'results in development of' c if and only if p is a developmental process and p results in the state of c changing from its initial state as a primordium or anlage through its mature state and to its final state. -INFO lowercase_definition has habitat textual definition +INFO lowercase_definition has habitat textual definition x 'has habitat' y if and only if: x is an organism, y is a habitat, and y can sustain and allow the growth of a population of xs. INFO lowercase_definition causally upstream of, positive effect textual definition p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. INFO lowercase_definition causally upstream of, negative effect textual definition p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. INFO lowercase_definition characteristic of part of textual definition q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w. @@ -3175,18 +3288,18 @@ INFO lowercase_definition involved in positive regulation of textual definition INFO lowercase_definition involved in negative regulation of textual definition c involved in regulation of p if c is involved in some p' and p' negatively regulates some p INFO lowercase_definition involved in or involved in regulation of textual definition c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p INFO lowercase_definition is active in textual definition c executes activity in d if and only if c enables p and p occurs_in d. Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure. -INFO lowercase_definition contributes to morphology of textual definition

+INFO lowercase_definition contributes to morphology of textual definition p contributes to morphology of w if and only if a change in the morphology of p entails a change in the morphology of w. Examples: every skull contributes to morphology of the head which it is a part of. Counter-example: nuclei do not generally contribute to the morphology of the cell they are part of, as they are buffered by cytoplasm. INFO lowercase_definition composed primarily of textual definition x composed_primarily_of y if and only if more than half of the mass of x is made from y or units of the same type as y. INFO lowercase_definition has part that occurs in textual definition p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c. -INFO lowercase_definition existence starts during textual definition = α(y) & α(x) <= ω(y).> -INFO lowercase_definition existence starts with textual definition -INFO lowercase_definition existence overlaps textual definition = α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y))> -INFO lowercase_definition existence starts and ends during textual definition = α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y)> -INFO lowercase_definition existence ends during textual definition = α(y).> -INFO lowercase_definition existence ends with textual definition +INFO lowercase_definition existence starts during textual definition x existence starts during y if and only if the time point at which x starts is after or equivalent to the time point at which y starts and before or equivalent to the time point at which y ends. Formally: x existence starts during y iff α(x) >= α(y) & α(x) <= ω(y). +INFO lowercase_definition existence starts with textual definition x starts ends with y if and only if the time point at which x starts is equivalent to the time point at which y starts. Formally: x existence starts with y iff α(x) = α(y). +INFO lowercase_definition existence overlaps textual definition x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y)) +INFO lowercase_definition existence starts and ends during textual definition x exists during y if and only if: 1) the time point at which x begins to exist is after or equal to the time point at which y begins and 2) the time point at which x ceases to exist is before or equal to the point at which y ends. Formally: x existence starts and ends during y iff α(x) >= α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y) +INFO lowercase_definition existence ends during textual definition x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y). +INFO lowercase_definition existence ends with textual definition x existence ends with y if and only if the time point at which x ends is equivalent to the time point at which y ends. Formally: x existence ends with y iff ω(x) = ω(y). INFO lowercase_definition transformation of textual definition x transformation of y if x is the immediate transformation of y, or is linked to y through a chain of transformation relationships INFO lowercase_definition immediate transformation of textual definition x immediate transformation of y iff x immediately succeeds y temporally at a time boundary t, and all of the matter present in x at t is present in y at t, and all the matter in y at t is present in x at t -INFO lowercase_definition existence starts during or after textual definition = α (y).> +INFO lowercase_definition existence starts during or after textual definition x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y). INFO lowercase_definition existence ends during or before textual definition x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends. INFO lowercase_definition causal relation between processes textual definition p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one of direct activation or direct inhibition. p may be upstream, downstream, part of or a container of q. INFO lowercase_definition causal relation between processes textual definition p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. @@ -3203,7 +3316,7 @@ INFO lowercase_definition results in breakdown of textual definition p results i INFO lowercase_definition results in organization of textual definition p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c INFO lowercase_definition directly positively regulates textual definition p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q. INFO lowercase_definition directly negatively regulates textual definition p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q. -INFO lowercase_definition produces textual definition +INFO lowercase_definition produces textual definition a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix. INFO lowercase_definition produced by textual definition a produced_by b iff some process that occurs_in b has_output a. INFO lowercase_definition has primary input or output textual definition p 'has primary input ot output' c iff either (a) p 'has primary input' c or (b) p 'has primary output' c. INFO lowercase_definition has primary output textual definition p has primary output c if (a) p has output c and (b) the goal of process is to modify, produce, or transform c. @@ -3216,7 +3329,7 @@ INFO lowercase_definition indirectly causally upstream of textual definition p i INFO lowercase_definition indirectly regulates textual definition p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q. INFO lowercase_definition different in magnitude relative to textual definition q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. INFO lowercase_definition increased in magnitude relative to textual definition q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. -INFO lowercase_definition has cross section textual definition +INFO lowercase_definition has cross section textual definition s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2. INFO lowercase_definition results in changes to anatomical or cellular structure textual definition p has anatomical participant c iff p has participant c, and c is an anatomical entity INFO lowercase_definition anteriorly connected to textual definition x anteriorly_connected_to y iff the anterior part of x is connected to y. i.e. x connected_to y and x posterior_to y. INFO lowercase_definition distally connected to textual definition x distally_connected_to y iff the distal part of x is connected to y. i.e. x connected_to y and x proximal_to y. @@ -3224,7 +3337,6 @@ INFO lowercase_definition indirectly_supplies textual definition a indirectly_su INFO lowercase_definition posteriorly connected to textual definition x posteriorly_connected_to y iff the posterior part of x is connected to y. i.e. x connected_to y and x anterior_to y. INFO lowercase_definition proximally connected to textual definition x proximally_connected_to y iff the proximal part of x is connected to y. i.e. x connected_to y and x distal_to y. INFO lowercase_definition site_of textual definition c site_of p if c is the bearer of a disposition that is realized by a process that has p as part. -INFO lowercase_definition 129 mouse strain textual definition <129 is a mouse strain as described in Jackson Laboratory http://www.informatics.jax.org/mgihome/nomen/strain_129.shtml> INFO lowercase_definition CAST/EiJ textual definition " Both CAST/EiJ and CASA/RkJ (Stock No. 000735) were derived from wild mice trapped in Thailand. CAST is often combined with the common laboratory strains to generate F1 hybrids with high levels of heterozygosity for use in genetic mapping. Unlike the wild-derived strain SPRET, male F1 mice from a CAST cross are fertile. diff --git a/src/templates/RBO_classes.owl b/src/templates/RBO_classes.owl index 7fa7c20..513d2aa 100644 --- a/src/templates/RBO_classes.owl +++ b/src/templates/RBO_classes.owl @@ -292,8 +292,8 @@ - Ionizing radiation classified by the material entity which generates or emits it. - ionizing radiation categorized by source + Ionizing radiation classified by the material entity which generates or emits it. + ionizing radiation categorized by source @@ -302,8 +302,8 @@ - Radiation originating outside the Earth's atmosphere. - space radiation + Radiation originating outside the Earth's atmosphere. + space radiation @@ -312,9 +312,9 @@ - One of the principal sources of ground radiation is radon gas. - Radiation produced on Earth or on another planetary body by natural or artificial means. - ground radiation + One of the principal sources of ground radiation is radon gas. + Radiation produced on Earth or on another planetary body by natural or artificial means. + ground radiation @@ -323,9 +323,9 @@ - Material presenting, when irradiated, interaction properties similar to those of soft tissue. - ICRP glossary (http://icrpaedia.org/Tissue_equivalent_material) - tissue equivalent material + Material presenting, when irradiated, interaction properties similar to those of soft tissue. + ICRP glossary (http://icrpaedia.org/Tissue_equivalent_material) + tissue equivalent material @@ -335,8 +335,8 @@ - An atomic nucleus, fully stripped of its orbital electrons, and containing 2, 3, 4, 5, or 6 protons. - light ion + An atomic nucleus, fully stripped of its orbital electrons, and containing 2, 3, 4, 5, or 6 protons. + light ion @@ -345,9 +345,9 @@ - Ionization chambers and silicon solid state detectors can be used as active dosimeters. - A radiation measuring device which records dose at the time of detection, with data available in real time - active dosimeter + Ionization chambers and silicon solid state detectors can be used as active dosimeters. + A radiation measuring device which records dose at the time of detection, with data available in real time + active dosimeter @@ -356,9 +356,9 @@ - Thermoluminescent dosimeters and plastic nuclear track detectors are passive detectors. - A radiation measuring device which integrates the amount of radiation to which it is exposed. Passive detectors are interrogated at a later time to determine the dose. - passive dosimeter + Thermoluminescent dosimeters and plastic nuclear track detectors are passive detectors. + A radiation measuring device which integrates the amount of radiation to which it is exposed. Passive detectors are interrogated at a later time to determine the dose. + passive dosimeter @@ -367,8 +367,8 @@ - The amount of ionizing radiation to which a member of the population on Earth is exposed from natural sources, such as terrestrial radiation from naturally-occurring radionuclides in the soil, cosmic radiation originating in outer space, and naturally-occurring ra - background ionizing radiation + The amount of ionizing radiation to which a member of the population on Earth is exposed from natural sources, such as terrestrial radiation from naturally-occurring radionuclides in the soil, cosmic radiation originating in outer space, and naturally-occurring ra + background ionizing radiation @@ -377,9 +377,9 @@ - The effective dose was calculated to be 300 mSv. - The sum of the equivalent doses to all organs in the body, each adjusted to account for the sensitivity of the organ to radiation. Effective dose is calculated for the whole body. Effective dose is expressed in millisieverts (mSv). - effective dose + The effective dose was calculated to be 300 mSv. + The sum of the equivalent doses to all organs in the body, each adjusted to account for the sensitivity of the organ to radiation. Effective dose is calculated for the whole body. Effective dose is expressed in millisieverts (mSv). + effective dose @@ -388,10 +388,10 @@ - The samples were exposed to a mixed radiation field consisting of several ions at different energies. - The process of exposing the same sample to more than one type and/or energy of radiation, in sequence or simultaneously. - mixed field|mixed radiation field - mixed radiation + The samples were exposed to a mixed radiation field consisting of several ions at different energies. + The process of exposing the same sample to more than one type and/or energy of radiation, in sequence or simultaneously. + mixed field|mixed radiation field + mixed radiation @@ -400,8 +400,8 @@ - Radiation classified by where the exposure to the radiation is occurring. - radiation environment + Radiation classified by where the exposure to the radiation is occurring. + radiation environment @@ -410,8 +410,8 @@ - That part of the Earth exposed to the Earth atmosphere. - earth surface + That part of the Earth exposed to the Earth atmosphere. + earth surface @@ -420,8 +420,8 @@ - The region between the Earth's surface and an altitude of approximately 100 km - earth atmosphere + The region between the Earth's surface and an altitude of approximately 100 km + earth atmosphere @@ -430,10 +430,10 @@ - LEO - The region of outer space between the Earth's atmosphere and the innermost Earth radiation belt - LEO - low earth orbit + LEO + The region of outer space between the Earth's atmosphere and the innermost Earth radiation belt + LEO + low earth orbit @@ -442,10 +442,10 @@ - BLEO - That part of outer space beyond the Earth's radiation belts. - BLEO - beyond low earth orbit + BLEO + That part of outer space beyond the Earth's radiation belts. + BLEO + beyond low earth orbit @@ -454,9 +454,9 @@ - fractionated - A radiation dose administered in two or more exposures at specified time intervals - fractionated radiation exposure + fractionated + A radiation dose administered in two or more exposures at specified time intervals + fractionated radiation exposure @@ -465,9 +465,9 @@ - A unit of absorbed dose equal to 1/1000 of a rad - mrad - millirad + A unit of absorbed dose equal to 1/1000 of a rad + mrad + millirad @@ -476,9 +476,9 @@ - The equivalent dose was calculated to be 300 mSv. - The product of the mean absorbed dose in an organ or tissue and the radiation weighting factor (w_R )of the radiation type of interest - equivalent dose + The equivalent dose was calculated to be 300 mSv. + The product of the mean absorbed dose in an organ or tissue and the radiation weighting factor (w_R )of the radiation type of interest + equivalent dose @@ -487,9 +487,9 @@ - The total dose was administered in five dose fractions. - The absorbed radiation dose administered in a single one of a series comprising a fractionated radiation exposure - dose fraction + The total dose was administered in five dose fractions. + The absorbed radiation dose administered in a single one of a series comprising a fractionated radiation exposure + dose fraction @@ -498,8 +498,8 @@ - Penetrating ionizing radiation, both particulate and electromagnetic, that originates in outer space - cosmic radiation + Penetrating ionizing radiation, both particulate and electromagnetic, that originates in outer space + cosmic radiation @@ -508,9 +508,9 @@ - Galactic cosmic radiation is one of the principal sources of radiation dose outside low-earth orbit - Galactic cosmic radiation consists of high-energy charged particles originating from outside the solar system - galactic cosmic radiation + Galactic cosmic radiation is one of the principal sources of radiation dose outside low-earth orbit + Galactic cosmic radiation consists of high-energy charged particles originating from outside the solar system + galactic cosmic radiation @@ -519,9 +519,9 @@ - Solar cosmic radiation contributes to the radiation dose to humans in space. - Solar cosmic radiation is high-energy charged particles that originate from the sun. - solar cosmic radiation + Solar cosmic radiation contributes to the radiation dose to humans in space. + Solar cosmic radiation is high-energy charged particles that originate from the sun. + solar cosmic radiation @@ -530,9 +530,9 @@ - The dose rate was 0.5 mGy/min. - The measurement datum representing a dose to an organism or object per unit time. - dose rate + The dose rate was 0.5 mGy/min. + The measurement datum representing a dose to an organism or object per unit time. + dose rate @@ -541,10 +541,10 @@ - The Apollo spacecraft took 24 astronauts to the Moon between 1968 and 1972. - Vehicles, crewed or uncrewed, which are designed to orbit about the Earth or another celestial body or be placed into a trajectory to another celestial body or location in space. - NASA Thesaurus, 1988 - spacecraft + The Apollo spacecraft took 24 astronauts to the Moon between 1968 and 1972. + Vehicles, crewed or uncrewed, which are designed to orbit about the Earth or another celestial body or be placed into a trajectory to another celestial body or location in space. + NASA Thesaurus, 1988 + spacecraft @@ -553,8 +553,8 @@ - a self-contained unit of a spacecraft - spacecraft module + a self-contained unit of a spacecraft + spacecraft module @@ -563,11 +563,11 @@ - ISS module - The experiment was conducted in the International Space Station module Columbus - The experiment was conducted on the Russian module of the ISS. - A self-contained unit of the International Space Station. - international space station module + ISS module + The experiment was conducted in the International Space Station module Columbus + The experiment was conducted on the Russian module of the ISS. + A self-contained unit of the International Space Station. + international space station module @@ -576,10 +576,10 @@ - Mir was a space station that operated in low Earth orbit from 1986 to 2001, operated by the Soviet Union and later by Russia. - A spacecraft capable of supporting a human crew in orbit for an extended period of time. It lacks major propulsion or landing systems. Stations must have docking ports to allow other spacecraft to dock to transfer crew and supplies. - Wikipedia - space station + Mir was a space station that operated in low Earth orbit from 1986 to 2001, operated by the Soviet Union and later by Russia. + A spacecraft capable of supporting a human crew in orbit for an extended period of time. It lacks major propulsion or landing systems. Stations must have docking ports to allow other spacecraft to dock to transfer crew and supplies. + Wikipedia + space station @@ -588,10 +588,10 @@ - The HIMAC accelerator has a beamline dedicated for radiation biology experiments. - The path leading from a particle accelerator to an experimental station used in experiments in particle physics, materials science, chemistry, and molecular biology, or in irradiation tests or to produce isotopes. - Wikipedia - particle accelerator beamline + The HIMAC accelerator has a beamline dedicated for radiation biology experiments. + The path leading from a particle accelerator to an experimental station used in experiments in particle physics, materials science, chemistry, and molecular biology, or in irradiation tests or to produce isotopes. + Wikipedia + particle accelerator beamline @@ -600,8 +600,8 @@ - Radiation produced by a particle accelerator. - particle accelerator radiation + Radiation produced by a particle accelerator. + particle accelerator radiation @@ -610,8 +610,8 @@ - Radiation produced by a nuclear reactor. - nuclear reactor radiation + Radiation produced by a nuclear reactor. + nuclear reactor radiation @@ -620,10 +620,10 @@ - Cs-137 gamma - High energy photons emitted during nuclear decay of the Cesium-137 isotope. - Cs-137 - cesium-137 gamma radiation + Cs-137 gamma + High energy photons emitted during nuclear decay of the Cesium-137 isotope. + Cs-137 + cesium-137 gamma radiation @@ -632,10 +632,10 @@ - Co-60 gamma - High energy photons emitted during nuclear decay of the Cobalt-60 isotope. - Co-60 - cobalt-60 gamma radiation + Co-60 gamma + High energy photons emitted during nuclear decay of the Cobalt-60 isotope. + Co-60 + cobalt-60 gamma radiation @@ -644,11 +644,11 @@ - Co-57 gamma - High energy photons emitted during nuclear decay of the Cobalt-57 isotope. - obo:RBO_00000060 - Co-57 - cobalt-57 gamma radiation + Co-57 gamma + High energy photons emitted during nuclear decay of the Cobalt-57 isotope. + obo:RBO_00000060 + Co-57 + cobalt-57 gamma radiation @@ -657,9 +657,9 @@ - Isotopes that exhibit radioactivity and undergo radioactive decay. (From Grant & Hackh's Chemical Dictionary, 5th ed & McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) - http://purl.bioontology.org/ontology/MESH/D011868 - radionuclide + Isotopes that exhibit radioactivity and undergo radioactive decay. (From Grant & Hackh's Chemical Dictionary, 5th ed & McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) + http://purl.bioontology.org/ontology/MESH/D011868 + radionuclide @@ -668,9 +668,9 @@ - A series of radioactive elements from ACTINIUM, atomic number 89, to and including LAWRENCIUM, atomic number 103 - http://purl.bioontology.org/ontology/MESH/D008671 - actinide + A series of radioactive elements from ACTINIUM, atomic number 89, to and including LAWRENCIUM, atomic number 103 + http://purl.bioontology.org/ontology/MESH/D008671 + actinide @@ -679,9 +679,9 @@ - A trivalent radioactive element and the prototypical member of the actinide family. It has the atomic symbol Ac, and atomic number 89. Its principal isotope is 227 and it decays primarily by beta-emission. - http://purl.bioontology.org/ontology/MESH/D000186 - actinium + A trivalent radioactive element and the prototypical member of the actinide family. It has the atomic symbol Ac, and atomic number 89. Its principal isotope is 227 and it decays primarily by beta-emission. + http://purl.bioontology.org/ontology/MESH/D000186 + actinium @@ -690,9 +690,9 @@ - A completely man-made radioactive actinide with atomic symbol Am, and atomic number 95. Its valence can range from +3 to +6. Because of its nonmagnetic ground state, it is an excellent superconductor. It is also used in bone mineral analysis and as a radiation source for radiotherapy - http://purl.bioontology.org/ontology/MESH/D000576 - americium + A completely man-made radioactive actinide with atomic symbol Am, and atomic number 95. Its valence can range from +3 to +6. Because of its nonmagnetic ground state, it is an excellent superconductor. It is also used in bone mineral analysis and as a radiation source for radiotherapy + http://purl.bioontology.org/ontology/MESH/D000576 + americium @@ -701,9 +701,9 @@ - A man-made radioactive actinide with atomic symbol Cf, atomic number 98, and atomic weight 251. Its valence can be +2 or +3. Californium has medical use as a radiation source for radiotherapy - http://purl.bioontology.org/ontology/MESH/D002142 - californium + A man-made radioactive actinide with atomic symbol Cf, atomic number 98, and atomic weight 251. Its valence can be +2 or +3. Californium has medical use as a radiation source for radiotherapy + http://purl.bioontology.org/ontology/MESH/D002142 + californium @@ -712,9 +712,9 @@ - A radioactive element of the actinide metals family. It has the atomic symbol Np, and atomic number 93. - http://purl.bioontology.org/ontology/MESH/D009405 - neptunium + A radioactive element of the actinide metals family. It has the atomic symbol Np, and atomic number 93. + http://purl.bioontology.org/ontology/MESH/D009405 + neptunium @@ -723,9 +723,9 @@ - A naturally radioactive element of the actinide metals series. It has the atomic symbol Pu, and atomic number 94. Plutonium is used as a nuclear fuel, to produce radioisotopes for research, in radionuclide batteries for pacemakers, and as the agent of fission in nuclear weapons. - http://purl.bioontology.org/ontology/MESH/D011005 - plutonium + A naturally radioactive element of the actinide metals series. It has the atomic symbol Pu, and atomic number 94. Plutonium is used as a nuclear fuel, to produce radioisotopes for research, in radionuclide batteries for pacemakers, and as the agent of fission in nuclear weapons. + http://purl.bioontology.org/ontology/MESH/D011005 + plutonium @@ -734,9 +734,9 @@ - A radioactive element of the actinide series of metals. It has an atomic symbol Th, atomic number 90, and atomic weight 232.04. It is used as fuel in nuclear reactors to produce fissionable uranium isotopes. Because of its radioopacity, various thorium compounds are used to facilitate visualization in roentgenography. - http://purl.bioontology.org/ontology/MESH/D013910 - thorium + A radioactive element of the actinide series of metals. It has an atomic symbol Th, atomic number 90, and atomic weight 232.04. It is used as fuel in nuclear reactors to produce fissionable uranium isotopes. Because of its radioopacity, various thorium compounds are used to facilitate visualization in roentgenography. + http://purl.bioontology.org/ontology/MESH/D013910 + thorium @@ -745,9 +745,9 @@ - A radioactive element of the actinide series of metals. It has an atomic symbol U, atomic number 92, and atomic weight 238.03. U-235 is used as the fissionable fuel in nuclear weapons and as fuel in nuclear power reactors. - http://purl.bioontology.org/ontology/MESH/D014501 - uranium + A radioactive element of the actinide series of metals. It has an atomic symbol U, atomic number 92, and atomic weight 238.03. U-235 is used as the fissionable fuel in nuclear weapons and as fuel in nuclear power reactors. + http://purl.bioontology.org/ontology/MESH/D014501 + uranium @@ -756,11 +756,11 @@ - UV - Electromagnetic radiation with photon energies approximately 3-120 eV. High energy UV radiation can be ioinizing. - UV radiation - http://son.nasa.gov/tass/content/electrospectrum.htm - ultraviolet radiation + UV + Electromagnetic radiation with photon energies approximately 3-120 eV. High energy UV radiation can be ioinizing. + UV radiation + http://son.nasa.gov/tass/content/electrospectrum.htm + ultraviolet radiation @@ -769,11 +769,11 @@ - radioprotector - E.G. amifostine. - A substance present at the time of irradiation that mitigates or prevents the biological effects of irradiation. - Richard T. Hoppe, Theodore Locke Phillips, Mack Roach, Leibel and Phillips Textbook of Radiation Oncology (Third Edition), W.B. Saunders, (2010), ISBN 9781416058977, https://doi.org/10.1016/B978-1-4160-5897-7.00093-7. - radioprotectant + radioprotector + E.G. amifostine. + A substance present at the time of irradiation that mitigates or prevents the biological effects of irradiation. + Richard T. Hoppe, Theodore Locke Phillips, Mack Roach, Leibel and Phillips Textbook of Radiation Oncology (Third Edition), W.B. Saunders, (2010), ISBN 9781416058977, https://doi.org/10.1016/B978-1-4160-5897-7.00093-7. + radioprotectant @@ -782,8 +782,8 @@ - Radionuclide chelators are small organic molecules or in some cases larger peptides that chemically sequester the radionuclide ion by forming a complex that determines the thermodynamic stability and kinetic inertness of the radionuclide. - radionuclide chelator + Radionuclide chelators are small organic molecules or in some cases larger peptides that chemically sequester the radionuclide ion by forming a complex that determines the thermodynamic stability and kinetic inertness of the radionuclide. + radionuclide chelator @@ -792,8 +792,8 @@ - A co-carcinogen is generally a chemical that promotes the effects of a carcinogen in the production of cancer. In some circumstances exposure to radiation or physical trauma is considered to be co-carcinogenic. - co-carcinogen + A co-carcinogen is generally a chemical that promotes the effects of a carcinogen in the production of cancer. In some circumstances exposure to radiation or physical trauma is considered to be co-carcinogenic. + co-carcinogen @@ -802,9 +802,9 @@ - Radiation response modifiers are agents that alter tumor or normal tissue response to radiation, such as radiation sensitizers and radiation protectors. - Citrin DE, Mitchell JB. Altering the response to radiation: sensitizers and protectors. Semin Oncol. 2014 Dec;41(6):848-59. doi: 10.1053/j.seminoncol.2014.09.013. Epub 2014 Oct 7. PMID: 25499642; PMCID: PMC4270009. - radiation response modifier + Radiation response modifiers are agents that alter tumor or normal tissue response to radiation, such as radiation sensitizers and radiation protectors. + Citrin DE, Mitchell JB. Altering the response to radiation: sensitizers and protectors. Semin Oncol. 2014 Dec;41(6):848-59. doi: 10.1053/j.seminoncol.2014.09.013. Epub 2014 Oct 7. PMID: 25499642; PMCID: PMC4270009. + radiation response modifier @@ -813,9 +813,9 @@ - Radiation response modifiers that are peptides. - Shaghaghi, Zahra et al. “Potential utility of peptides against damage induced by ionizing radiation.” Future oncology (2021): doi/10.2217/fon-2020-0577 - peptide radiation response modifier + Radiation response modifiers that are peptides. + Shaghaghi, Zahra et al. “Potential utility of peptides against damage induced by ionizing radiation.” Future oncology (2021): doi/10.2217/fon-2020-0577 + peptide radiation response modifier @@ -824,8 +824,8 @@ - Radiation response modifiers that are small molecules. - small molecule radiation response modifier + Radiation response modifiers that are small molecules. + small molecule radiation response modifier @@ -834,9 +834,9 @@ - A person employed or otherwise working in commercial activities where nuclear materials are created, handled or disposed and at risk of occupational radiation exposure. Excludes health workers. - Nezahat Hunter, Richard G.E. Haylock, Michael Gillies, Wei Zhang; Extended analysis of solid cancer incidence among the Nuclear Industry Workers in the UK: 1955–2011. Radiat Res 2022; doi: https://doi.org/10.1667/RADE-20-00269.1 - nuclear industry worker + A person employed or otherwise working in commercial activities where nuclear materials are created, handled or disposed and at risk of occupational radiation exposure. Excludes health workers. + Nezahat Hunter, Richard G.E. Haylock, Michael Gillies, Wei Zhang; Extended analysis of solid cancer incidence among the Nuclear Industry Workers in the UK: 1955–2011. Radiat Res 2022; doi: https://doi.org/10.1667/RADE-20-00269.1 + nuclear industry worker @@ -845,7 +845,7 @@ - astronaut + astronaut @@ -854,7 +854,7 @@ - military + military @@ -863,7 +863,7 @@ - medical professional + medical professional @@ -872,7 +872,7 @@ - dentist + dentist @@ -881,7 +881,7 @@ - radiologist + radiologist @@ -890,9 +890,9 @@ - The theme or modality of an experimental, theoretical, critical or summative study involving radiation, radioactive materials including their impacts on orgnisms and society. - radiobiology investigation - radiobiology study type + The theme or modality of an experimental, theoretical, critical or summative study involving radiation, radioactive materials including their impacts on orgnisms and society. + radiobiology investigation + radiobiology study type @@ -901,9 +901,9 @@ - An epidemiological study is the study (scientific, systematic, and data-driven) of the distribution (frequency, pattern) and determinants (causes, risk factors) of health-related states and events (not just diseases) in specified populations (neighborhood, school, city, state, country, global) - https://www.cdc.gov/csels/dsepd/ss1978/lesson1/section1.html - epidemiological study + An epidemiological study is the study (scientific, systematic, and data-driven) of the distribution (frequency, pattern) and determinants (causes, risk factors) of health-related states and events (not just diseases) in specified populations (neighborhood, school, city, state, country, global) + https://www.cdc.gov/csels/dsepd/ss1978/lesson1/section1.html + epidemiological study @@ -912,9 +912,9 @@ - A study of the impact of radiation on the composition of or processes within the natural or anthropogenic environment. - environmental study - A owl:deprecated + A study of the impact of radiation on the composition of or processes within the natural or anthropogenic environment. + environmental study + A owl:deprecated @@ -923,8 +923,8 @@ - A study who endpoint is the lifespan of the organism under investifgation. - lifespan study + A study who endpoint is the lifespan of the organism under investifgation. + lifespan study @@ -933,8 +933,8 @@ - A study of the effect of agents including radiation, seperately or together, on the incidence or type of neoplasia or pre-neoplasia. - carcinogenesis study + A study of the effect of agents including radiation, seperately or together, on the incidence or type of neoplasia or pre-neoplasia. + carcinogenesis study @@ -943,8 +943,8 @@ - A study in which the structural or processual damage to normal tissue caused by radiation is assessed. Often by histopathology or molecular profiling. - tissue damage study + A study in which the structural or processual damage to normal tissue caused by radiation is assessed. Often by histopathology or molecular profiling. + tissue damage study @@ -953,8 +953,8 @@ - A study of the mechanism or effects of radiation on dna damage and its repair. - dna damage and repair study + A study of the mechanism or effects of radiation on dna damage and its repair. + dna damage and repair study @@ -963,8 +963,8 @@ - A study of the effects of internal or external radiation on cellular or organismal physiology. - physiological study + A study of the effects of internal or external radiation on cellular or organismal physiology. + physiological study @@ -973,8 +973,8 @@ - A study of the effects of radiation on the integrity, composition and quality of adult, fetal or embryonic anatomical structures. - anatomical study + A study of the effects of radiation on the integrity, composition and quality of adult, fetal or embryonic anatomical structures. + anatomical study @@ -983,8 +983,8 @@ - A study of the effects of external irradiation on an organism. - external exposure study + A study of the effects of external irradiation on an organism. + external exposure study @@ -993,8 +993,8 @@ - A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. - internal contamination study + A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. + internal contamination study @@ -1003,8 +1003,8 @@ - A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. - mixed exposure route study + A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. + mixed exposure route study @@ -1013,8 +1013,8 @@ - A study of the effects of external irradiation on an organism where the most of the dose is given in a single or small number of fractions closely in time. - acute external exposure study + A study of the effects of external irradiation on an organism where the most of the dose is given in a single or small number of fractions closely in time. + acute external exposure study @@ -1023,8 +1023,8 @@ - A study of the effects of external irradiation on an organism where the dose is given over a protracted time period either continuously or in many fractions. Often these are lose dose studies. - chronic external exposure study + A study of the effects of external irradiation on an organism where the dose is given over a protracted time period either continuously or in many fractions. Often these are lose dose studies. + chronic external exposure study @@ -1033,8 +1033,8 @@ - A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. The dose is delivered over a long period of time, often continuously and generlly at low dose. For example long term Radon exposure by inhalation. - chronic internal contamination study + A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. The dose is delivered over a long period of time, often continuously and generlly at low dose. For example long term Radon exposure by inhalation. + chronic internal contamination study @@ -1043,8 +1043,8 @@ - A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. Most of the dose is given over a short period of time and is generally unfractionated, such as in brachytherapy. - acute internal contamination study + A study of the effects of internal irradiation on an organism where the radiation source is internalised within the body tissues ( eg. by injection), gastrointestinal ( eg gavage), urogenital, auditory or respiratory ( eg instillation or inhalation) systems. Most of the dose is given over a short period of time and is generally unfractionated, such as in brachytherapy. + acute internal contamination study @@ -1053,8 +1053,8 @@ - A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. Acute exposure involves usually a single exposure over a short period of time with no fractionation. - acute mixed exposure route study + A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. Acute exposure involves usually a single exposure over a short period of time with no fractionation. + acute mixed exposure route study @@ -1063,8 +1063,8 @@ - A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. Chronic exposure involves usually a continuous or highly fractionated exposure over a long period of time. - chronic mixed exposure route study + A study of the effects of radiation exposure where the exposoure has an internal and external mode of application. Chronic exposure involves usually a continuous or highly fractionated exposure over a long period of time. + chronic mixed exposure route study @@ -1073,8 +1073,8 @@ - A study of the effects of radiation on gene expression. - gene expression study + A study of the effects of radiation on gene expression. + gene expression study @@ -1083,8 +1083,8 @@ - A study of the effects of radiation on the proteome or individual proteins. - proteomics study + A study of the effects of radiation on the proteome or individual proteins. + proteomics study @@ -1093,8 +1093,8 @@ - A study that aims at the discovery of protein, RNA or other molecular entities or modifcations that can act as reliable surrogates for the prediction or measurement of the effects of radiation or the response of the organism to radiation. - marker discovery study + A study that aims at the discovery of protein, RNA or other molecular entities or modifcations that can act as reliable surrogates for the prediction or measurement of the effects of radiation or the response of the organism to radiation. + marker discovery study @@ -1103,9 +1103,9 @@ - A study that aims at the discovery, development or assessment of efficacy of therapeutic agents or processes designed to mitigate or cure the effects of radiation exposure. - therapeutics study - A owl:deprecated + A study that aims at the discovery, development or assessment of efficacy of therapeutic agents or processes designed to mitigate or cure the effects of radiation exposure. + therapeutics study + A owl:deprecated @@ -1114,8 +1114,8 @@ - A study that uses survival as an endpoint. Generally applicable to animal studies rather than human studies which would use the "lifespan" measure (RBO:00000085) - survival study + A study that uses survival as an endpoint. Generally applicable to animal studies rather than human studies which would use the "lifespan" measure (RBO:00000085) + survival study @@ -1124,8 +1124,8 @@ - A study of the effects of radiation on the metabolome or individual metabolites. - metabolomics study + A study of the effects of radiation on the metabolome or individual metabolites. + metabolomics study @@ -1134,9 +1134,9 @@ - A study of the contributing factors consequences and prevention of nuclear accidents - nuclear accident study - A owl:deprecated + A study of the contributing factors consequences and prevention of nuclear accidents + nuclear accident study + A owl:deprecated @@ -1145,8 +1145,8 @@ - A study of the toxicity of chemical or biological agents on cells or whole organisms. - toxicity study + A study of the toxicity of chemical or biological agents on cells or whole organisms. + toxicity study @@ -1155,8 +1155,8 @@ - A study of the effects of radiation on the endocrine system or of endocrine hormones on the effects of radiation. - endocrine study + A study of the effects of radiation on the endocrine system or of endocrine hormones on the effects of radiation. + endocrine study @@ -1165,9 +1165,9 @@ - A study of the effects of radiation on the offspring of an irradiated animal or plant. - transgenerational study - offspring study + A study of the effects of radiation on the offspring of an irradiated animal or plant. + transgenerational study + offspring study @@ -1176,9 +1176,9 @@ - A study of the distribution and metabolism orf drugs or biologicals used for therapeutic purposes. - pharmacokinetics - biokinetics study + A study of the distribution and metabolism orf drugs or biologicals used for therapeutic purposes. + pharmacokinetics + biokinetics study @@ -1187,8 +1187,8 @@ - A set of behaviours that have some socially agreed upon function and for which there is an accepted code of norms. This may refer to a role within an organisation or within society as a whole. For example a Profession” can be defined as a cluster of occupational roles, or roles in which the incumbents perform certain functions valued in the organisation or society. - occupational role + A set of behaviours that have some socially agreed upon function and for which there is an accepted code of norms. This may refer to a role within an organisation or within society as a whole. For example a Profession” can be defined as a cluster of occupational roles, or roles in which the incumbents perform certain functions valued in the organisation or society. + occupational role @@ -1197,10 +1197,10 @@ - Neutrons or charged particles, such as protons or alpha particles that produce ionizing events densely spaced on a molecular scale (e.g., >10 keV-micron^[-1]. - NCRP https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf - NCIT:C17052 - high linear energy transfer radiation + Neutrons or charged particles, such as protons or alpha particles that produce ionizing events densely spaced on a molecular scale (e.g., >10 keV-micron^[-1]. + NCRP https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf + NCIT:C17052 + high linear energy transfer radiation @@ -1209,11 +1209,11 @@ - X and gamma rays or light charged particles such as electrons that produce sparse ionizing events far apart on a molecular scale. - NCRP https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf - NCIT:C17052 - low LET|low-LET - low linear energy transfer radiation + X and gamma rays or light charged particles such as electrons that produce sparse ionizing events far apart on a molecular scale. + NCRP https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf + NCIT:C17052 + low LET|low-LET + low linear energy transfer radiation @@ -1222,8 +1222,8 @@ - Electromagnetic radiation having sufficient energy to remove one or more electrons from an atom - ionizing electromagnetic radiation + Electromagnetic radiation having sufficient energy to remove one or more electrons from an atom + ionizing electromagnetic radiation @@ -1232,13 +1232,13 @@ - radiation dosimeter - A device that is used to measure the amount of ionizing radiation exposure or absorption. - radiation dosimeter - NCIT - NCIT:C150121 - dosimeter - radiation dosimeter device + radiation dosimeter + A device that is used to measure the amount of ionizing radiation exposure or absorption. + radiation dosimeter + NCIT + NCIT:C150121 + dosimeter + radiation dosimeter device @@ -1247,11 +1247,11 @@ - Particle or electromagnetic radiation with sufficient energy to liberate one or more electrons from an atom. - ionising radiation - NCIT:C17052 - ionising radiation - ionizing radiation + Particle or electromagnetic radiation with sufficient energy to liberate one or more electrons from an atom. + ionising radiation + NCIT:C17052 + ionising radiation + ionizing radiation @@ -1260,11 +1260,11 @@ - charged particle - Charged particles with kinetic energy imparted by natural or artificial means (such as by a particle accelerator) - charged particle - NCIT:C18982 - charged particle radiation + charged particle + Charged particles with kinetic energy imparted by natural or artificial means (such as by a particle accelerator) + charged particle + NCIT:C18982 + charged particle radiation @@ -1273,8 +1273,8 @@ - NCIT:C19015 - risk estimate + NCIT:C19015 + risk estimate @@ -1283,8 +1283,8 @@ - NCIT:C19662 - lifetime risk estimate + NCIT:C19662 + lifetime risk estimate @@ -1293,10 +1293,10 @@ - electromagnetic radiation with photon energies greater than approximately 100 keV - http://son.nasa.gov/tass/content/electrospectrum.htm - NCIT:C44386 - gamma radiation + electromagnetic radiation with photon energies greater than approximately 100 keV + http://son.nasa.gov/tass/content/electrospectrum.htm + NCIT:C44386 + gamma radiation @@ -1306,9 +1306,9 @@ - A device used to impart kinetic energy to subatomic particles by means of electric and magnetic fields - NCIT:C94854 - particle accelerator + A device used to impart kinetic energy to subatomic particles by means of electric and magnetic fields + NCIT:C94854 + particle accelerator @@ -1318,9 +1318,9 @@ - A device in which nuclear fission may be initiated and controlled in a self-sustaining chain reaction to generate energy or produce useful radiation. - MESH:D009688 - nuclear reactor + A device in which nuclear fission may be initiated and controlled in a self-sustaining chain reaction to generate energy or produce useful radiation. + MESH:D009688 + nuclear reactor @@ -1329,9 +1329,9 @@ - GO:0008150 - biological process - owl:deprecated + GO:0008150 + biological process + owl:deprecated @@ -1340,9 +1340,9 @@ - GO:0009987 - cellular process - owl:deprecated + GO:0009987 + cellular process + owl:deprecated @@ -1351,10 +1351,10 @@ - The process by which an entity is exposed to electromagnetic or acoustic radiation radiation energy internally or externally. - 0000-0002-5111-7263 - Irradiation - radiation exposure + The process by which an entity is exposed to electromagnetic or acoustic radiation radiation energy internally or externally. + 0000-0002-5111-7263 + Irradiation + radiation exposure @@ -1363,10 +1363,10 @@ - Unplanned exposure to radiation of any type in any environment or otherwise planned process. - 0000-0002-5111-7263 - Accidental irradiation - accidental radiation exposure + Unplanned exposure to radiation of any type in any environment or otherwise planned process. + 0000-0002-5111-7263 + Accidental irradiation + accidental radiation exposure @@ -1376,10 +1376,10 @@ - Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally. - 0000-0002-5111-7263 - Planned irradiation - planned radiation exposure + Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally. + 0000-0002-5111-7263 + Planned irradiation + planned radiation exposure @@ -1388,10 +1388,10 @@ - Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a diagnosis of disease. - 0000-0002-5111-7263 - Diagnostic irradiation - medical diagnostic radiation exposure + Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a diagnosis of disease. + 0000-0002-5111-7263 + Diagnostic irradiation + medical diagnostic radiation exposure @@ -1400,10 +1400,10 @@ - Exposure to naturally occurring radiation (NORM) of any type in any environment . - 0000-0002-5111-7263 - Environmental irradiation - exposure to naturally ocurring radioactive material + Exposure to naturally occurring radiation (NORM) of any type in any environment . + 0000-0002-5111-7263 + Environmental irradiation + exposure to naturally ocurring radioactive material @@ -1412,10 +1412,10 @@ - Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a cure or mitigation of disease. - 0000-0002-5111-7263 - Therapeutic irradiation - medical therapeutic radiation exposure + Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a cure or mitigation of disease. + 0000-0002-5111-7263 + Therapeutic irradiation + medical therapeutic radiation exposure @@ -1424,10 +1424,10 @@ - Unplanned exposure to anthropogenic radiation of any type in any environment ; for example radiation from nuclear waste, nuclear industry discharge or weapons. - 0000-0002-5111-7263 - Accidental man-made radiation exposure - accidental non-medical anthropogenic radiation exposure + Unplanned exposure to anthropogenic radiation of any type in any environment ; for example radiation from nuclear waste, nuclear industry discharge or weapons. + 0000-0002-5111-7263 + Accidental man-made radiation exposure + accidental non-medical anthropogenic radiation exposure @@ -1436,10 +1436,10 @@ - Exposure to ionising radiation created by a man-made machine or exposure to a fixed source. For example a cobalt source, an X ray machine, an acceleratororf a nucler weapon. - 0000-0002-5111-7263 - Exposure to human generated radiation - anthropogenic radiation exposure + Exposure to ionising radiation created by a man-made machine or exposure to a fixed source. For example a cobalt source, an X ray machine, an acceleratororf a nucler weapon. + 0000-0002-5111-7263 + Exposure to human generated radiation + anthropogenic radiation exposure @@ -1447,11 +1447,11 @@ - + - Planned exposure to radiation generated through a device or exposure to a source emitting ionising radiation - 0000-0002-5111-7263 - planned anthropogenic radiation exposure + Planned exposure to radiation generated through a device or exposure to a source emitting ionising radiation + 0000-0002-5111-7263 + planned anthropogenic radiation exposure @@ -1460,9 +1460,9 @@ - Accidental or incidental exposure to radiation from a man made process or machine. Covers both radiation accidents and routine occupational exposure. - 0000-0002-5111-7263 - accidental anthropogenic radiation exposure + Accidental or incidental exposure to radiation from a man made process or machine. Covers both radiation accidents and routine occupational exposure. + 0000-0002-5111-7263 + accidental anthropogenic radiation exposure @@ -1471,9 +1471,9 @@ - Accidental exposure occurring during medical therapy or diagnostics, for example medical radiation accidents or overdoses. - 0000-0002-5111-7263 - accidental medical anthropogenic radiation exposure + Accidental exposure occurring during medical therapy or diagnostics, for example medical radiation accidents or overdoses. + 0000-0002-5111-7263 + accidental medical anthropogenic radiation exposure @@ -1482,10 +1482,10 @@ - Incidental exposure to naturally occurring radiation in a natural or anthropogenic environment, such as geographical areas with high background levels of radiation or specific locations such as Uranium mines. - 0000-0002-5111-7263 - unplanned naturally occurring radiation exposure - TRUE + Incidental exposure to naturally occurring radiation in a natural or anthropogenic environment, such as geographical areas with high background levels of radiation or specific locations such as Uranium mines. + 0000-0002-5111-7263 + unplanned naturally occurring radiation exposure + TRUE @@ -1494,9 +1494,9 @@ - Deliberate or knowing exposure to naturally occurring radiation in a natural or anthropogenic environment, such as a radon spa. - 0000-0002-5111-7263 - planned naturally occurring radiation exposure + Deliberate or knowing exposure to naturally occurring radiation in a natural or anthropogenic environment, such as a radon spa. + 0000-0002-5111-7263 + planned naturally occurring radiation exposure @@ -1505,9 +1505,9 @@ - Studies relating to human society and the interrelation of social and educational factors with individual thought and behaviour including mental illness. - 0000-0002-5111-7263 - social and psychosocial study + Studies relating to human society and the interrelation of social and educational factors with individual thought and behaviour including mental illness. + 0000-0002-5111-7263 + social and psychosocial study @@ -1516,10 +1516,10 @@ - Studies on the distribution of information or opinion by technological means of communication that reach large numbers of people. - 0000-0002-5111-7263 - http://purl.biolontology.org/ontology/CSP/1580-0981 - mass media study + Studies on the distribution of information or opinion by technological means of communication that reach large numbers of people. + 0000-0002-5111-7263 + http://purl.biolontology.org/ontology/CSP/1580-0981 + mass media study @@ -1528,9 +1528,9 @@ - Studies on the civil, legal, and political preparedness for accidental or deliberate release of radioactive materials or radiation into the environment. - 0000-0002-5111-7263 - preparedness study + Studies on the civil, legal, and political preparedness for accidental or deliberate release of radioactive materials or radiation into the environment. + 0000-0002-5111-7263 + preparedness study @@ -1539,10 +1539,10 @@ - Studies in which research is conducted with human subjects or on material of human origin in which the investigator directly interacts with human subjects, including the dveelopment of new technologies, understanding of the mechanisms of disease, therapy, clinical trials, epidemiology behaviousrand health services research. - 0000-0002-5111-7263 - http://purl.bioontology.org/ontology/CSP/4006-0105 - clinical study + Studies in which research is conducted with human subjects or on material of human origin in which the investigator directly interacts with human subjects, including the dveelopment of new technologies, understanding of the mechanisms of disease, therapy, clinical trials, epidemiology behaviousrand health services research. + 0000-0002-5111-7263 + http://purl.bioontology.org/ontology/CSP/4006-0105 + clinical study @@ -1551,9 +1551,9 @@ - Study of the laws, statutes, ordinances, government or international treaty regulations or authoritative guidelines, as well as for legal controversy and court decisions, relating to the regulation of radiation safety, movement and containment of radioactive materials and the consequences for human health or the natural environment of radioactive contamination. - 0000-0002-5111-7263 - legal and governance study + Study of the laws, statutes, ordinances, government or international treaty regulations or authoritative guidelines, as well as for legal controversy and court decisions, relating to the regulation of radiation safety, movement and containment of radioactive materials and the consequences for human health or the natural environment of radioactive contamination. + 0000-0002-5111-7263 + legal and governance study @@ -1562,9 +1562,9 @@ - Studies relating to organisations and processes concerned with freedom from or resilience towards potential harm caused by hostile intent or circumstances (for example terrorism and illegal release of radioactive substances or radiation) towards the natural environment or human population, and the enforcement of relevant laws and international treaties. - 0000-0002-5111-7263 - security and law enforcement study + Studies relating to organisations and processes concerned with freedom from or resilience towards potential harm caused by hostile intent or circumstances (for example terrorism and illegal release of radioactive substances or radiation) towards the natural environment or human population, and the enforcement of relevant laws and international treaties. + 0000-0002-5111-7263 + security and law enforcement study @@ -1573,9 +1573,9 @@ - A study whose intention is to discover knowledge concerning the origins, nature diagnosis or therapy for neoplastic disease and cancer. This includes studies in humans, model organisms, the laboratory and in silico. This class includes experimental and epidemiological studies specifically aimed at cancer. - 0000-0002-5111-7263 - cancer study + A study whose intention is to discover knowledge concerning the origins, nature diagnosis or therapy for neoplastic disease and cancer. This includes studies in humans, model organisms, the laboratory and in silico. This class includes experimental and epidemiological studies specifically aimed at cancer. + 0000-0002-5111-7263 + cancer study @@ -1584,9 +1584,9 @@ - The specific manner, characteristic, pattern of application, or the employment of any technology, approach or formal procedure to implement the study plan to generate a study type. - 0000-0002-5111-7263 - study modality + The specific manner, characteristic, pattern of application, or the employment of any technology, approach or formal procedure to implement the study plan to generate a study type. + 0000-0002-5111-7263 + study modality @@ -1595,9 +1595,9 @@ - Studies of the presence of radiation of any type in the natural or anthropogenic environment and its impact on animals, plants, and microorganisms. This includes studies measuring nuclide transfer in the environment, and interaction with meteorological phenomena. This excludes occupational exposure and the human working environment. - 0000-0002-5111-7263 - environmental study + Studies of the presence of radiation of any type in the natural or anthropogenic environment and its impact on animals, plants, and microorganisms. This includes studies measuring nuclide transfer in the environment, and interaction with meteorological phenomena. This excludes occupational exposure and the human working environment. + 0000-0002-5111-7263 + environmental study @@ -1606,9 +1606,9 @@ - Studies concerned with the regulation, monitoring and operation of the nuclear industry. For example nuclear power station and reprocessing plants, isotope purification and manufactore, weapons manufacture and testing. This includes occupation health studies, impact of accidental or deliberate release on the natural or man made environment and impact on organisms specifically affected directly or indirectly by contamination. - 0000-0002-5111-7263 - nuclear industry study + Studies concerned with the regulation, monitoring and operation of the nuclear industry. For example nuclear power station and reprocessing plants, isotope purification and manufactore, weapons manufacture and testing. This includes occupation health studies, impact of accidental or deliberate release on the natural or man made environment and impact on organisms specifically affected directly or indirectly by contamination. + 0000-0002-5111-7263 + nuclear industry study @@ -1617,10 +1617,10 @@ - Research done in a laboratory. A laboratory study may use special equipment and cells or animals to investigate the effects of an experimental perturbation, discover fundamental molecular mechanisms, assay biological substances, or find out if a drug, procedure, or treatment is likely to be useful in humans. A laboratory investigation is often characterised by a hypothesis and is carried out with controls. - 0000-0002-5111-7263 - http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28278 - laboratory study + Research done in a laboratory. A laboratory study may use special equipment and cells or animals to investigate the effects of an experimental perturbation, discover fundamental molecular mechanisms, assay biological substances, or find out if a drug, procedure, or treatment is likely to be useful in humans. A laboratory investigation is often characterised by a hypothesis and is carried out with controls. + 0000-0002-5111-7263 + http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28278 + laboratory study @@ -1629,10 +1629,10 @@ - Study of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ethicolegal constructs surrounding radiation and radiation safety and regulation. - 0000-0002-5111-7263 - http://purl.bioontology.org/ontology/CSP/2482-9501 - attitudinal study + Study of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ethicolegal constructs surrounding radiation and radiation safety and regulation. + 0000-0002-5111-7263 + http://purl.bioontology.org/ontology/CSP/2482-9501 + attitudinal study @@ -1641,9 +1641,9 @@ - Study concerning exchange or transmission of thoughts, messages, or information between people or between authorities and the general public (for example educational information, risk communication, safety communication) concerning exposure to and use of radiation. - 0000-0002-5111-7263 - communication study + Study concerning exchange or transmission of thoughts, messages, or information between people or between authorities and the general public (for example educational information, risk communication, safety communication) concerning exposure to and use of radiation. + 0000-0002-5111-7263 + communication study @@ -1652,9 +1652,9 @@ - A study focussed on a set of people with some shared characteristic. The substance of shared element varies widely, from geography to a situation to interest to lives and values. The term is widely used to evoke sense of collectivity. For example communities collectively exposed to radioactive environmental contamination. - 0000-0002-5111-7263 - community study + A study focussed on a set of people with some shared characteristic. The substance of shared element varies widely, from geography to a situation to interest to lives and values. The term is widely used to evoke sense of collectivity. For example communities collectively exposed to radioactive environmental contamination. + 0000-0002-5111-7263 + community study @@ -1663,9 +1663,9 @@ - The study of political involvement in radiation and nuclear regulation, military use, and safety as shown by inclusion in political manifestos and messaging by established or informal groups and its impact on voting patterns and democracy. - 0000-0002-5111-7263 - political and psephological study + The study of political involvement in radiation and nuclear regulation, military use, and safety as shown by inclusion in political manifestos and messaging by established or informal groups and its impact on voting patterns and democracy. + 0000-0002-5111-7263 + political and psephological study @@ -1674,9 +1674,9 @@ - A study measuring "psychological" aspects of a person such as knowledge, skills, abilities, attitudes, or personality using defined scales. - 0000-0002-5111-7263 - psychometric study + A study measuring "psychological" aspects of a person such as knowledge, skills, abilities, attitudes, or personality using defined scales. + 0000-0002-5111-7263 + psychometric study @@ -1685,9 +1685,9 @@ - A study of human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology. - 0000-0002-5111-7263 - behavioural study + A study of human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology. + 0000-0002-5111-7263 + behavioural study @@ -1696,9 +1696,9 @@ - A study dealing with group relationships, patterns of collective behavior, and social organization. - 0000-0002-5111-7263 - sociological study + A study dealing with group relationships, patterns of collective behavior, and social organization. + 0000-0002-5111-7263 + sociological study @@ -1707,9 +1707,9 @@ - Studies involving fields of inquiry into human constructs and concerns as opposed to natural processes . These are traditionally the study of literature, philosophy, and religion. Included in this definition are sociological studies, especially those concerned with the social impact of the humanities. - 0000-0002-5111-7263 - social science and humanities study + Studies involving fields of inquiry into human constructs and concerns as opposed to natural processes . These are traditionally the study of literature, philosophy, and religion. Included in this definition are sociological studies, especially those concerned with the social impact of the humanities. + 0000-0002-5111-7263 + social science and humanities study @@ -1718,9 +1718,9 @@ - Specifically an attitudinal study looking at how perception, for example of risk, and expectations affect behaviour. - 0000-0002-5111-7263 - perceptions, expectations and behaviours study + Specifically an attitudinal study looking at how perception, for example of risk, and expectations affect behaviour. + 0000-0002-5111-7263 + perceptions, expectations and behaviours study @@ -1729,9 +1729,9 @@ - Sociological, attitudinal, ethocolegal and regulatory approaches to governance of radiation and radioactive substance use. - 0000-0002-5111-7263 - holistic approaches to governance study + Sociological, attitudinal, ethocolegal and regulatory approaches to governance of radiation and radioactive substance use. + 0000-0002-5111-7263 + holistic approaches to governance study @@ -1740,9 +1740,9 @@ - Studies on policy concerning socially and ethically responsible research and innovation - 0000-0002-5111-7263 - responsible research and innovation study + Studies on policy concerning socially and ethically responsible research and innovation + 0000-0002-5111-7263 + responsible research and innovation study @@ -1751,9 +1751,9 @@ - Studies of the engagement between an organisational entity and those groups or individuals potentially or actually impacted by the actions of that entity over a range of activities and approaches. - 0000-0002-5111-7263 - stakeholder engagement study + Studies of the engagement between an organisational entity and those groups or individuals potentially or actually impacted by the actions of that entity over a range of activities and approaches. + 0000-0002-5111-7263 + stakeholder engagement study @@ -1762,9 +1762,9 @@ - Study concerning the modes, efficacy and response to communication of risk and health impacts of radiation in all aspects. - 0000-0002-5111-7263 - risk and health communication study + Study concerning the modes, efficacy and response to communication of risk and health impacts of radiation in all aspects. + 0000-0002-5111-7263 + risk and health communication study @@ -1773,9 +1773,9 @@ - Studies concenring the attitudes to and practices of radiological protection in defined groups of people. For example the nuclear industry of a country or within a specific laboratory. - 0000-0002-5111-7263 - radiological protection culture study + Studies concenring the attitudes to and practices of radiological protection in defined groups of people. For example the nuclear industry of a country or within a specific laboratory. + 0000-0002-5111-7263 + radiological protection culture study @@ -1784,10 +1784,10 @@ - Genetic study done at the population level or among population groups, generally to find the cause, incidence or spread of a disease or to see the response to a treatment, nutrition or environment. - 0000-0002-5111-7263 - http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16160 - genetic population study + Genetic study done at the population level or among population groups, generally to find the cause, incidence or spread of a disease or to see the response to a treatment, nutrition or environment. + 0000-0002-5111-7263 + http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16160 + genetic population study @@ -1796,10 +1796,10 @@ - A type of study in which participants are enrolled into the study before they develop the disease or outcome in question. - 0000-0002-5111-7263 - http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C142646 - prospective study + A type of study in which participants are enrolled into the study before they develop the disease or outcome in question. + 0000-0002-5111-7263 + http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C142646 + prospective study @@ -1808,10 +1808,10 @@ - Observational studies which include an organized system that uses observational methods to collect uniform data (clinical and other) prospectively for a population defined by a particular disorder/disease, condition (including susceptibility to a disorder), or exposure (including products, health care services, and/or procedures) and that serves a predetermined scientific, clinical, or policy purpose. Patient registries may be single purpose or on-going data collection programs that address one or more questions. (AHRQ) An observational study that is also considered to be a Patient Registry. - 0000-0002-5111-7263 - http://purl.obolibrary.org/obo/NCIT_C129000 - registry study + Observational studies which include an organized system that uses observational methods to collect uniform data (clinical and other) prospectively for a population defined by a particular disorder/disease, condition (including susceptibility to a disorder), or exposure (including products, health care services, and/or procedures) and that serves a predetermined scientific, clinical, or policy purpose. Patient registries may be single purpose or on-going data collection programs that address one or more questions. (AHRQ) An observational study that is also considered to be a Patient Registry. + 0000-0002-5111-7263 + http://purl.obolibrary.org/obo/NCIT_C129000 + registry study @@ -1820,9 +1820,9 @@ - A study looking backwards in time using observations collected predominantly prior to subject selection and enrolment - 0000-0002-5111-7263 - retrospective study + A study looking backwards in time using observations collected predominantly prior to subject selection and enrolment + 0000-0002-5111-7263 + retrospective study @@ -1831,9 +1831,9 @@ - A study of the number of new cases of a given disease during a given period in a specified population. It also is used for the rate at which new events occur in a defined population. this class also includes PREVALENCE, which refers to all cases in the population at a given time. - 0000-0002-5111-7263 - incidence or prevalence study + A study of the number of new cases of a given disease during a given period in a specified population. It also is used for the rate at which new events occur in a defined population. this class also includes PREVALENCE, which refers to all cases in the population at a given time. + 0000-0002-5111-7263 + incidence or prevalence study @@ -1842,9 +1842,9 @@ - Studies concerning the optimisation of situation awareness through gathering and analysing information, and methodologies for making decisions on that awareness, such as estimating the path of a radioactive fallout with respect to weather and population density and making a decision to evacuate a population. - 0000-0002-5111-7263 - situation awareness and decision support study + Studies concerning the optimisation of situation awareness through gathering and analysing information, and methodologies for making decisions on that awareness, such as estimating the path of a radioactive fallout with respect to weather and population density and making a decision to evacuate a population. + 0000-0002-5111-7263 + situation awareness and decision support study @@ -1853,9 +1853,9 @@ - A study concerning the protection of the population from unexpected radioactive discharge or contamination, such as a dirty bomb, and civil safetyy coningency plans, such as deployment of emergency services and evacuation. - 0000-0002-5111-7263 - civil protection study + A study concerning the protection of the population from unexpected radioactive discharge or contamination, such as a dirty bomb, and civil safetyy coningency plans, such as deployment of emergency services and evacuation. + 0000-0002-5111-7263 + civil protection study @@ -1864,9 +1864,9 @@ - Studies on planning for unexpected natural or man-made radiological catastrophe of substantial extent causing significant property damage or destruction, loss of life or sometimes permanent changes to the natural environment. Broader scope than civil protection as may relate to livestock, food and water shortage, disease outbreak and extensive traumas caused by precipitating or consequential damage. - 0000-0002-5111-7263 - disaster planning study + Studies on planning for unexpected natural or man-made radiological catastrophe of substantial extent causing significant property damage or destruction, loss of life or sometimes permanent changes to the natural environment. Broader scope than civil protection as may relate to livestock, food and water shortage, disease outbreak and extensive traumas caused by precipitating or consequential damage. + 0000-0002-5111-7263 + disaster planning study @@ -1875,9 +1875,9 @@ - Studies on plannig for or analysing a nuclear accident with release of airborn or waterborn contamination into the environment. Narrower than Disaster planning study but may be used to qualify an annotation to Disaster planning study if the source of contamination is a nuclear accident. A nuclear accident is not necessarily a disaster. - 0000-0002-5111-7263 - nuclear accident study + Studies on plannig for or analysing a nuclear accident with release of airborn or waterborn contamination into the environment. Narrower than Disaster planning study but may be used to qualify an annotation to Disaster planning study if the source of contamination is a nuclear accident. A nuclear accident is not necessarily a disaster. + 0000-0002-5111-7263 + nuclear accident study @@ -1886,10 +1886,10 @@ - A controlled study designed to assess the safety and efficacy of new drugs, devices, treatments, or preventive measures in humans by comparing two or more interventions or regimens - 0000-0002-5111-7263 - http://purl.bioontology.org/ontology/CSP/0690-6917 - clinical trial study + A controlled study designed to assess the safety and efficacy of new drugs, devices, treatments, or preventive measures in humans by comparing two or more interventions or regimens + 0000-0002-5111-7263 + http://purl.bioontology.org/ontology/CSP/0690-6917 + clinical trial study @@ -1898,9 +1898,9 @@ - Study of the effects of radiation used in a medical therapeutic or diagnostic context. Inlcudes radiation accidents in this context, excludes occupational exposure for health professionals. - 0000-0002-5111-7263 - medical radiological safety study + Study of the effects of radiation used in a medical therapeutic or diagnostic context. Inlcudes radiation accidents in this context, excludes occupational exposure for health professionals. + 0000-0002-5111-7263 + medical radiological safety study @@ -1909,9 +1909,9 @@ - A study concerned with health and safety policy development, implementation and practice in the workplace including investigating accidents at work, and chronic occupational exposure. Includes monitoring compliance with health and safety legislation and study of the promotion and maintenance of physical and mental health in the work environment. - 0000-0002-5111-7263 - occupational health study + A study concerned with health and safety policy development, implementation and practice in the workplace including investigating accidents at work, and chronic occupational exposure. Includes monitoring compliance with health and safety legislation and study of the promotion and maintenance of physical and mental health in the work environment. + 0000-0002-5111-7263 + occupational health study @@ -1920,9 +1920,9 @@ - Study on the efficacy, outcomes and adverse consequences of exposure to medical diagnostic procedures using internal or external irradiation. - 0000-0002-5111-7263 - radiation based diagnostics study + Study on the efficacy, outcomes and adverse consequences of exposure to medical diagnostic procedures using internal or external irradiation. + 0000-0002-5111-7263 + radiation based diagnostics study @@ -1931,9 +1931,9 @@ - Study of the efficacy, outcomes and adverse consequences of exposure to therapeutic use of ionizing and nonionizing radiation including RADIONUCLIDE THERAPY, therapeutic radiation with visible, laser, or ultraviolet light. Includes technical development of protocols and equipment. - 0000-0002-5111-7263 - radiotherapy study + Study of the efficacy, outcomes and adverse consequences of exposure to therapeutic use of ionizing and nonionizing radiation including RADIONUCLIDE THERAPY, therapeutic radiation with visible, laser, or ultraviolet light. Includes technical development of protocols and equipment. + 0000-0002-5111-7263 + radiotherapy study @@ -1942,9 +1942,9 @@ - A study involvingdevelopment of agents or procedures intended to produce an effect that is intended to mitigate or stop a pathologic process. - 0000-0002-5111-7263 - therapeutics study + A study involvingdevelopment of agents or procedures intended to produce an effect that is intended to mitigate or stop a pathologic process. + 0000-0002-5111-7263 + therapeutics study @@ -1953,10 +1953,10 @@ - A study of the macroscopic and microscopic anatomical changes in diseased tissue. - 0000-0002-5111-7263 - http://purl.bioontology.org/ontology/CSP/1448-3909 - histopathologic study + A study of the macroscopic and microscopic anatomical changes in diseased tissue. + 0000-0002-5111-7263 + http://purl.bioontology.org/ontology/CSP/1448-3909 + histopathologic study @@ -1965,9 +1965,9 @@ - Study of legal and statutory instruments and legislation designed to regulate the safety, use and transport of radioactive materials, release of such materials into the environment, or external radiation. - 0000-0002-5111-7263 - radiation legislation study + Study of legal and statutory instruments and legislation designed to regulate the safety, use and transport of radioactive materials, release of such materials into the environment, or external radiation. + 0000-0002-5111-7263 + radiation legislation study @@ -1976,9 +1976,9 @@ - Study of the policy approaches and their implementation concerned with harmonising regulatory guidelines and legislation dealing with radiation and radioactive substances between legislatures, generally internationally. - 0000-0002-5111-7263 - regulatory harmonisation study + Study of the policy approaches and their implementation concerned with harmonising regulatory guidelines and legislation dealing with radiation and radioactive substances between legislatures, generally internationally. + 0000-0002-5111-7263 + regulatory harmonisation study @@ -1987,9 +1987,9 @@ - Study of the development, implementation and monitoring of nuclear non proliferation treaties between states. - 0000-0002-5111-7263 - nuclear proliferation treaty study + Study of the development, implementation and monitoring of nuclear non proliferation treaties between states. + 0000-0002-5111-7263 + nuclear proliferation treaty study @@ -1998,10 +1998,10 @@ - Studies concerning intentional release of organisms (germs), toxic chemicals, or radioactive substances with intent to harm or kill people or the environment, or to inflict panic within a population. - 0000-0002-5111-7263 - http://purl.bioontology.org/ontology/CSP/5000-0002 - bioterrorism study + Studies concerning intentional release of organisms (germs), toxic chemicals, or radioactive substances with intent to harm or kill people or the environment, or to inflict panic within a population. + 0000-0002-5111-7263 + http://purl.bioontology.org/ontology/CSP/5000-0002 + bioterrorism study @@ -2010,9 +2010,9 @@ - Study of strategies and their implementation towards defence against radiation used as a weapon conducted by military powers and institutions. May also include civil defence where the military has a significant operational role, but not disaster preparedness. - 0000-0002-5111-7263 - military defence study + Study of strategies and their implementation towards defence against radiation used as a weapon conducted by military powers and institutions. May also include civil defence where the military has a significant operational role, but not disaster preparedness. + 0000-0002-5111-7263 + military defence study @@ -2021,9 +2021,9 @@ - Study of biological processes that involve adding/removing chemical moieties to/from DNA, including methylation, phosphorylation, dephosphorylation, etc. Includes interventional DNA modification. - 0000-0002-5111-7263 - dna modification study + Study of biological processes that involve adding/removing chemical moieties to/from DNA, including methylation, phosphorylation, dephosphorylation, etc. Includes interventional DNA modification. + 0000-0002-5111-7263 + dna modification study @@ -2032,9 +2032,9 @@ - Study of biological processes that involve adding/removing chemical moieties to/from histones, including methylation, acetylation,phosphorylation, dephosphorylation, etc. - 0000-0002-5111-7263 - histone modification study + Study of biological processes that involve adding/removing chemical moieties to/from histones, including methylation, acetylation,phosphorylation, dephosphorylation, etc. + 0000-0002-5111-7263 + histone modification study @@ -2043,9 +2043,9 @@ - Study conducted by means of structured or unstructured interviews of persons of interest. - 0000-0002-5111-7263 - interview study + Study conducted by means of structured or unstructured interviews of persons of interest. + 0000-0002-5111-7263 + interview study @@ -2054,9 +2054,9 @@ - A study of genetic variation and the inheritance of a trait or traits within a population or an individual including examination of genetic material for the presence or absence of cytogenetic or molecular genetic abnormalities. - 0000-0002-5111-7263 - genetic study + A study of genetic variation and the inheritance of a trait or traits within a population or an individual including examination of genetic material for the presence or absence of cytogenetic or molecular genetic abnormalities. + 0000-0002-5111-7263 + genetic study @@ -2065,9 +2065,9 @@ - A radiographic study used to evaluate a specific anatomic location for a specific purpose. This may include the assessment of imaging modalities and the development of new techniques. Includes PET, MRI, CT and related techniques. - 0000-0002-5111-7263 - imaging study + A radiographic study used to evaluate a specific anatomic location for a specific purpose. This may include the assessment of imaging modalities and the development of new techniques. Includes PET, MRI, CT and related techniques. + 0000-0002-5111-7263 + imaging study @@ -2076,9 +2076,9 @@ - Study concerned with the construction, analysis, evaluation, refinement etc. of mathematical or statistical models of the properties or behaviour of a set of entities, such as molecules, physiological processes, environmental processes such as nuclide transfer, such that functions are developed to reliably predict the behaviour of those entities. - 0000-0002-5111-7263 - mathematical modelling study + Study concerned with the construction, analysis, evaluation, refinement etc. of mathematical or statistical models of the properties or behaviour of a set of entities, such as molecules, physiological processes, environmental processes such as nuclide transfer, such that functions are developed to reliably predict the behaviour of those entities. + 0000-0002-5111-7263 + mathematical modelling study @@ -2087,9 +2087,9 @@ - A study usually conducted in a laboratory where non human animals are used to model aspects of a disease process or its therapy to provide insights into human biology or pathobiology. - 0000-0002-5111-7263 - model organism study + A study usually conducted in a laboratory where non human animals are used to model aspects of a disease process or its therapy to provide insights into human biology or pathobiology. + 0000-0002-5111-7263 + model organism study @@ -2098,9 +2098,9 @@ - Study concerning the development, use, calibration or standardisation of technologies for the qualitative or quantitative measurement of radiation and radionuclides. - 0000-0002-5111-7263 - monitoring technologies and metrology study + Study concerning the development, use, calibration or standardisation of technologies for the qualitative or quantitative measurement of radiation and radionuclides. + 0000-0002-5111-7263 + monitoring technologies and metrology study @@ -2109,9 +2109,9 @@ - Study of the chemistry of radioactive materials including radioactive tracer studies of metabolic processes - 0000-0002-5111-7263 - radiochemistry study + Study of the chemistry of radioactive materials including radioactive tracer studies of metabolic processes + 0000-0002-5111-7263 + radiochemistry study @@ -2120,9 +2120,9 @@ - Study of the development and implementation of public policy towards issues involving radiation - 0000-0002-5111-7263 - policy development study + Study of the development and implementation of public policy towards issues involving radiation + 0000-0002-5111-7263 + policy development study @@ -2131,9 +2131,9 @@ - Study of the effects of acoustic radiation on cellular and organismal physiology and the effects of acoustic radiation emitted in response to exposure to ionising radiation. - 0000-0002-5111-7263 - acoustic radiation study + Study of the effects of acoustic radiation on cellular and organismal physiology and the effects of acoustic radiation emitted in response to exposure to ionising radiation. + 0000-0002-5111-7263 + acoustic radiation study @@ -2142,9 +2142,9 @@ - Study of radiation levels and effects in the human built environment. - 0000-0002-5111-7263 - environmental study_ abiotic_anthropogenic + Study of radiation levels and effects in the human built environment. + 0000-0002-5111-7263 + environmental study_ abiotic_anthropogenic @@ -2153,9 +2153,9 @@ - Study of radiation levels and effects in the natural environment. - 0000-0002-5111-7263 - natural environment study + Study of radiation levels and effects in the natural environment. + 0000-0002-5111-7263 + natural environment study @@ -2164,9 +2164,9 @@ - The development and use of mathematical models and systems analysis for the description of naturally occurring non-human populations, and applications to measuring the effects of radiological contamination. - 0000-0002-5111-7263 - ecological population modelling study + The development and use of mathematical models and systems analysis for the description of naturally occurring non-human populations, and applications to measuring the effects of radiological contamination. + 0000-0002-5111-7263 + ecological population modelling study @@ -2175,9 +2175,9 @@ - The study of environmental contamination with radiation and radioactive substances and the toxic effects on the ecosystem either through chemical toxicity or radiation exposure. - 0000-0002-5111-7263 - ecotoxicology study + The study of environmental contamination with radiation and radioactive substances and the toxic effects on the ecosystem either through chemical toxicity or radiation exposure. + 0000-0002-5111-7263 + ecotoxicology study @@ -2186,9 +2186,9 @@ - The study of environmental contamination with radon and the toxic effects on biota including humans. Both natural and anthropogenic environments. Includes radiometrics, safety policies and mitigation technologies. - 0000-0002-5111-7263 - environmental radon study + The study of environmental contamination with radon and the toxic effects on biota including humans. Both natural and anthropogenic environments. Includes radiometrics, safety policies and mitigation technologies. + 0000-0002-5111-7263 + environmental radon study @@ -2197,9 +2197,9 @@ - Mathematical modelling of radionuclide transfer and dispersal processes in water, earth or air, either directly or through the mediation of biota. - 0000-0002-5111-7263 - radionuclide dispersal modelling study + Mathematical modelling of radionuclide transfer and dispersal processes in water, earth or air, either directly or through the mediation of biota. + 0000-0002-5111-7263 + radionuclide dispersal modelling study @@ -2208,9 +2208,9 @@ - Study of the ocurrence, levels and effects of naturally occurring radioactive materials such as Radon. - 0000-0002-5111-7263 - naturally occurring radioactive materials study + Study of the ocurrence, levels and effects of naturally occurring radioactive materials such as Radon. + 0000-0002-5111-7263 + naturally occurring radioactive materials study @@ -2219,9 +2219,9 @@ - Study involving the measurement of radiation levels, or concentration of radionuclides, in the natural or man made environment. Usually in a time series. - 0000-0002-5111-7263 - environmental radiation monitoring study + Study involving the measurement of radiation levels, or concentration of radionuclides, in the natural or man made environment. Usually in a time series. + 0000-0002-5111-7263 + environmental radiation monitoring study @@ -2230,9 +2230,9 @@ - Study concerned with the measurement of transfer of radionuclides to biota from the environment. - 0000-0002-5111-7263 - environmental radionuclide transfer study + Study concerned with the measurement of transfer of radionuclides to biota from the environment. + 0000-0002-5111-7263 + environmental radionuclide transfer study @@ -2241,9 +2241,9 @@ - Any study concenrd with the prevalence or effects on non-ionising radiations such as UV, acoustic, or RF. - 0000-0002-5111-7263 - non ionising electromagnetic radiation study + Any study concenrd with the prevalence or effects on non-ionising radiations such as UV, acoustic, or RF. + 0000-0002-5111-7263 + non ionising electromagnetic radiation study @@ -2252,9 +2252,9 @@ - Study concerning the safety, regulation, activities and engineering of nuclear installations including power stations, waste processing plant, radionuclide generation and purification plant, and military nuclear establishments. May include occupational health studies if broader than just occupationaal health in scope. - 0000-0002-5111-7263 - nuclear installation study + Study concerning the safety, regulation, activities and engineering of nuclear installations including power stations, waste processing plant, radionuclide generation and purification plant, and military nuclear establishments. May include occupational health studies if broader than just occupationaal health in scope. + 0000-0002-5111-7263 + nuclear installation study @@ -2263,9 +2263,9 @@ - Study of the process of generation of nuclear waste, its monitoring, regulation, disposal and inadvertent discharge. - 0000-0002-5111-7263 - nuclear waste study + Study of the process of generation of nuclear waste, its monitoring, regulation, disposal and inadvertent discharge. + 0000-0002-5111-7263 + nuclear waste study @@ -2274,9 +2274,9 @@ - Study of the engineering of nuclear installations such as power plants. - 0000-0002-5111-7263 - nuclear engineering study + Study of the engineering of nuclear installations such as power plants. + 0000-0002-5111-7263 + nuclear engineering study @@ -2285,9 +2285,9 @@ - Study of the process, regulation and monitoring of mines where exposure to naturally occurring radiation presents an occupational hazard for workers or the process itself, for example run off water or spoil, constitutes an environmental hazard. - 0000-0002-5111-7263 - mining study + Study of the process, regulation and monitoring of mines where exposure to naturally occurring radiation presents an occupational hazard for workers or the process itself, for example run off water or spoil, constitutes an environmental hazard. + 0000-0002-5111-7263 + mining study @@ -2296,9 +2296,9 @@ - A study using cells derived from an organism grown in artificial culture medium in a laboratory with the aim of understanding some aspect(s) of cell physiology, genetics or behaviour, generally as part of the testing of an hypothesis but also for diagnostic intent. - 0000-0002-5111-7263 - cell culture study + A study using cells derived from an organism grown in artificial culture medium in a laboratory with the aim of understanding some aspect(s) of cell physiology, genetics or behaviour, generally as part of the testing of an hypothesis but also for diagnostic intent. + 0000-0002-5111-7263 + cell culture study @@ -2307,9 +2307,9 @@ - A study using an organ, part of an organ or an organoid culture, derived from an organism and grown in artificial culture medium in a laboratory with the aim of understanding some aspect(s) of cell physiology, genetics or behaviour, generally as part of the testing of an hypothesis but also for diagnostic intent. The system differs from cell culture in the generation or maintenance of multiple cell types with the spatial and functional relationship between them derived from or reflecting the normal organisation in vivo. - 0000-0002-5111-7263 - organ culture study + A study using an organ, part of an organ or an organoid culture, derived from an organism and grown in artificial culture medium in a laboratory with the aim of understanding some aspect(s) of cell physiology, genetics or behaviour, generally as part of the testing of an hypothesis but also for diagnostic intent. The system differs from cell culture in the generation or maintenance of multiple cell types with the spatial and functional relationship between them derived from or reflecting the normal organisation in vivo. + 0000-0002-5111-7263 + organ culture study @@ -2318,9 +2318,9 @@ - Any study involving the manipulation, measurement, or characterisation of DNA or RNA in a cell or organism. - 0000-0002-5111-7263 - molecular genetic study + Any study involving the manipulation, measurement, or characterisation of DNA or RNA in a cell or organism. + 0000-0002-5111-7263 + molecular genetic study @@ -2329,9 +2329,9 @@ - Elucidation of the physical structure of a macromolecule, protein, carbohydrate, DNA or RNA, its analysis and manipulation based on structure/function considerations. - 0000-0002-5111-7263 - molecular structural study + Elucidation of the physical structure of a macromolecule, protein, carbohydrate, DNA or RNA, its analysis and manipulation based on structure/function considerations. + 0000-0002-5111-7263 + molecular structural study @@ -2340,9 +2340,9 @@ - A study using an intact organism, plant, animal, or microorganism - 0000-0002-5111-7263 - whole organism study + A study using an intact organism, plant, animal, or microorganism + 0000-0002-5111-7263 + whole organism study @@ -2351,9 +2351,9 @@ - Study of the cellular phenomenon which radiation energy is not been directly deposited in cells by transfer of medium, proximity/justaposition, or other means, but results in their behaving as if they had been irradiated. - 0000-0002-5111-7263 - bystander effect study + Study of the cellular phenomenon which radiation energy is not been directly deposited in cells by transfer of medium, proximity/justaposition, or other means, but results in their behaving as if they had been irradiated. + 0000-0002-5111-7263 + bystander effect study @@ -2362,9 +2362,9 @@ - A study of heritable phenotype changes that do not involve alterations in the DNA sequence. This may be in intact organisms or in cells and includes population analysis of epigenetic phenomena and molecular analysis of gene expression and epigenetic modifications of chromatin such as DNA methylation and histone acetylation. - 0000-0002-5111-7263 - epigenetic study + A study of heritable phenotype changes that do not involve alterations in the DNA sequence. This may be in intact organisms or in cells and includes population analysis of epigenetic phenomena and molecular analysis of gene expression and epigenetic modifications of chromatin such as DNA methylation and histone acetylation. + 0000-0002-5111-7263 + epigenetic study @@ -2373,9 +2373,9 @@ - Study of the frequency of induction , nature and consequences of the production of genetic or epigenetic alterations by any technique, including chemicals, radiation, recombination, or other molecular biology methods. - 0000-0002-5111-7263 - mutagenesis study + Study of the frequency of induction , nature and consequences of the production of genetic or epigenetic alterations by any technique, including chemicals, radiation, recombination, or other molecular biology methods. + 0000-0002-5111-7263 + mutagenesis study @@ -2384,9 +2384,9 @@ - Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or regulation of the nuclear industries. - 0000-0002-5111-7263 - attitudinal study of nuclear industry risk perception + Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or regulation of the nuclear industries. + 0000-0002-5111-7263 + attitudinal study of nuclear industry risk perception @@ -2395,9 +2395,9 @@ - Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ecological integrity towards natural or anthropogenic ionising radiation in the environment. - 0000-0002-5111-7263 - attitudinal study towards ionising radiation in the environment + Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ecological integrity towards natural or anthropogenic ionising radiation in the environment. + 0000-0002-5111-7263 + attitudinal study towards ionising radiation in the environment @@ -2406,9 +2406,9 @@ - Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ecological integrity towards natural or anthropogenic non-ionising radiation in the natural environment. - 0000-0002-5111-7263 - attitudinal study towards non-ionising radiation in the environment + Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety or ecological integrity towards natural or anthropogenic non-ionising radiation in the natural environment. + 0000-0002-5111-7263 + attitudinal study towards non-ionising radiation in the environment @@ -2417,9 +2417,9 @@ - Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety and efficacy in a clinical context where radiation is used for diagnostic or therapeutic procedures.. - 0000-0002-5111-7263 - attitudinal study towards medical radiation procedures + Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety and efficacy in a clinical context where radiation is used for diagnostic or therapeutic procedures.. + 0000-0002-5111-7263 + attitudinal study towards medical radiation procedures @@ -2428,9 +2428,9 @@ - Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety towards natural or anthropogenic non-ionising radiation in the occupational environment. - 0000-0002-5111-7263 - attitudinal study towards radiation in the occupational environment + Studies of the status or origins of a mental position, feeling or emotion toward a fact or state with respect to information or experience concerning radiation, radiation safety towards natural or anthropogenic non-ionising radiation in the occupational environment. + 0000-0002-5111-7263 + attitudinal study towards radiation in the occupational environment @@ -2439,9 +2439,9 @@ - Study of social and individual trust in the position and activities of legal or other competent advisory or regulatory authorities. - 0000-0002-5111-7263 - authority trust study + Study of social and individual trust in the position and activities of legal or other competent advisory or regulatory authorities. + 0000-0002-5111-7263 + authority trust study @@ -2450,9 +2450,9 @@ - Study on the modality, efficacy and responses to communcation of information or advice to populations or individuals, on the safety and risks of exposure to ionising radiation in any context. - 0000-0002-5111-7263 - risk communication study + Study on the modality, efficacy and responses to communcation of information or advice to populations or individuals, on the safety and risks of exposure to ionising radiation in any context. + 0000-0002-5111-7263 + risk communication study @@ -2461,9 +2461,9 @@ - Study on the modality, efficacy and responses to communication of information or advice to populations or individuals, on the safety and risks of exposure to ionising radiation in any context. - 0000-0002-5111-7263 - public communication study + Study on the modality, efficacy and responses to communication of information or advice to populations or individuals, on the safety and risks of exposure to ionising radiation in any context. + 0000-0002-5111-7263 + public communication study @@ -2472,9 +2472,9 @@ - Study on the modality, efficacy and responses to communication of information or advice to populations on any aspect of radiation, conceived of as an educational programme, and including a wider scope than just safety and risk. For example basic nuclear physics, emergency action advice. - 0000-0002-5111-7263 - public education study + Study on the modality, efficacy and responses to communication of information or advice to populations on any aspect of radiation, conceived of as an educational programme, and including a wider scope than just safety and risk. For example basic nuclear physics, emergency action advice. + 0000-0002-5111-7263 + public education study @@ -2483,9 +2483,9 @@ - Study involving attitudes, health status, social organisation of defined communities identified by common characteristics such as occupation type, geography, gender identity, with respect to radiation. - 0000-0002-5111-7263 - social affairs and community health study + Study involving attitudes, health status, social organisation of defined communities identified by common characteristics such as occupation type, geography, gender identity, with respect to radiation. + 0000-0002-5111-7263 + social affairs and community health study @@ -2494,9 +2494,9 @@ - Studies involving creation and assessment of plans for the future physical arrangement, well being, efficiency and condition of a community. It may have the goals of improving health, promoting efficiency in the provision of services and resources on a comprehensive basis for a whole community. In the context of radiation this may be concerned with community planning for dealing with mitigation measures for local NORM, or organised community-wide continegency measures for nuclear accident or recovery from such. - 0000-0002-5111-7263 - community planning study + Studies involving creation and assessment of plans for the future physical arrangement, well being, efficiency and condition of a community. It may have the goals of improving health, promoting efficiency in the provision of services and resources on a comprehensive basis for a whole community. In the context of radiation this may be concerned with community planning for dealing with mitigation measures for local NORM, or organised community-wide continegency measures for nuclear accident or recovery from such. + 0000-0002-5111-7263 + community planning study @@ -2505,9 +2505,9 @@ - Study concerned with eliciting information in a structured way concerning issues of interest from members of a community defined by common characteristics, for example occupation, geographical location, personal history or gender. - 0000-0002-5111-7263 - community survey study + Study concerned with eliciting information in a structured way concerning issues of interest from members of a community defined by common characteristics, for example occupation, geographical location, personal history or gender. + 0000-0002-5111-7263 + community survey study @@ -2516,9 +2516,9 @@ - A study concerned with human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology at the level of slected individuals. May be carried out by observation or as individual responses to a questioannaire or interview in the case of humans where the person records their own assessment of their behaviour. - 0000-0002-5111-7263 - individual behaviour study + A study concerned with human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology at the level of slected individuals. May be carried out by observation or as individual responses to a questioannaire or interview in the case of humans where the person records their own assessment of their behaviour. + 0000-0002-5111-7263 + individual behaviour study @@ -2527,9 +2527,9 @@ - A study concerned with human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology within substantial populations of individuals. Likely to be carried out by mass observation or indirect inference. - 0000-0002-5111-7263 - population behaviour study + A study concerned with human or animal activity, in terms of motivation, direction, result, emotion, perception, or etiology within substantial populations of individuals. Likely to be carried out by mass observation or indirect inference. + 0000-0002-5111-7263 + population behaviour study @@ -2538,9 +2538,9 @@ - Mathematical modelling for theraputic regime optimisation and for optimal tumor response, for example modelling spatiotemporal dynamics of tumor and blood volume fraction, and predicting response to radiation therapy. Also studies for beam modelling and multiimaging techniques. - 0000-0002-5111-7263 - radiotherapeutic modelling study + Mathematical modelling for theraputic regime optimisation and for optimal tumor response, for example modelling spatiotemporal dynamics of tumor and blood volume fraction, and predicting response to radiation therapy. Also studies for beam modelling and multiimaging techniques. + 0000-0002-5111-7263 + radiotherapeutic modelling study @@ -2549,9 +2549,9 @@ - Study of the radiolonuclide components and emissions from building materials - 0000-0002-5111-7263 - building materials radiological safety study + Study of the radiolonuclide components and emissions from building materials + 0000-0002-5111-7263 + building materials radiological safety study @@ -2560,9 +2560,9 @@ - Studies on radiological safety within buildings. Primary purpose os for buildings not specifially designed to hold radioactive materials but anaylyis and mitigation of risks from radioactive exposure from the local environment or materials. - 0000-0002-5111-7263 - building radiological safety study + Studies on radiological safety within buildings. Primary purpose os for buildings not specifially designed to hold radioactive materials but anaylyis and mitigation of risks from radioactive exposure from the local environment or materials. + 0000-0002-5111-7263 + building radiological safety study @@ -2571,9 +2571,9 @@ - Study of the weather and atmospheric dynamics mainly with respect to dissemination of radionuclides. - 0000-0002-5111-7263 - meteorology study + Study of the weather and atmospheric dynamics mainly with respect to dissemination of radionuclides. + 0000-0002-5111-7263 + meteorology study @@ -2582,9 +2582,9 @@ - Study of non-living objects in the environment, such as soils or rocks. - 0000-0002-5111-7263 - environmental study_abiotic + Study of non-living objects in the environment, such as soils or rocks. + 0000-0002-5111-7263 + environmental study_abiotic @@ -2593,9 +2593,9 @@ - Study of non-human biota in the natural environment. - 0000-0002-5111-7263 - environmental study_biota ( non human) + Study of non-human biota in the natural environment. + 0000-0002-5111-7263 + environmental study_biota ( non human) @@ -2604,9 +2604,9 @@ - Study which may include human and non-human biota in the environment. - 0000-0002-5111-7263 - environmental study_panbiota (all) + Study which may include human and non-human biota in the environment. + 0000-0002-5111-7263 + environmental study_panbiota (all) @@ -2615,9 +2615,9 @@ - Study of the measurement, effects and regulation of wireless communication signals, for example mobile phone radiation and microwave communication. - 0000-0002-5111-7263 - wireless communication radiation study + Study of the measurement, effects and regulation of wireless communication signals, for example mobile phone radiation and microwave communication. + 0000-0002-5111-7263 + wireless communication radiation study @@ -2626,10 +2626,10 @@ - The sample was irradiated with Cs-137 gamma ray photons. - Photons having energies that are greater than tens of thousands of electron volts (eV). - Britannica.com - gamma ray photon + The sample was irradiated with Cs-137 gamma ray photons. + Photons having energies that are greater than tens of thousands of electron volts (eV). + Britannica.com + gamma ray photon @@ -2638,10 +2638,10 @@ - The sample was irradiated with x-ray photons. - A photon with energies from about 100 eV (electron volts) to 1 MeV (million electron volts). - Britannica.com - x-ray photon + The sample was irradiated with x-ray photons. + A photon with energies from about 100 eV (electron volts) to 1 MeV (million electron volts). + Britannica.com + x-ray photon @@ -2650,13 +2650,13 @@ - Irradiation of the sample was with x-ray photons. - An energy transfer process in which energy in the form of particles or waves is transferred from one entity to another - 0000-0003-1741-8297 - Jack Miller - obo:RBO_0002000 - irradiation - TRUE + Irradiation of the sample was with x-ray photons. + An energy transfer process in which energy in the form of particles or waves is transferred from one entity to another + 0000-0003-1741-8297 + Jack Miller + obo:RBO_0002000 + irradiation + TRUE @@ -2665,8 +2665,8 @@ - A process involving the emission of energy from an atomic nucleus resulting in change in the character of the nucleus - radioactive decay + A process involving the emission of energy from an atomic nucleus resulting in change in the character of the nucleus + radioactive decay @@ -2675,8 +2675,8 @@ - Irradiation that is not the result of a planned process - unplanned irradiation + Irradiation that is not the result of a planned process + unplanned irradiation @@ -2685,8 +2685,8 @@ - Unplanned irradiation that is of anthropogenic origin - unplanned anthropogenic irradiation + Unplanned irradiation that is of anthropogenic origin + unplanned anthropogenic irradiation @@ -2695,8 +2695,8 @@ - Unplanned irradiation that is non-anthropogenic in origin - unplanned naturally occurring radiation exposure + Unplanned irradiation that is non-anthropogenic in origin + unplanned naturally occurring radiation exposure @@ -2705,8 +2705,8 @@ - Environmental monitoring that includes continual assay for radiation dose or quality. - environmental radiation monitoring + Environmental monitoring that includes continual assay for radiation dose or quality. + environmental radiation monitoring @@ -2715,8 +2715,8 @@ - Monitoring within an environment which was not man-made. - natural environment monitoring + Monitoring within an environment which was not man-made. + natural environment monitoring @@ -2725,8 +2725,8 @@ - Monitoring within a man-made or constructed environment - anthropogenic environment monitoring + Monitoring within a man-made or constructed environment + anthropogenic environment monitoring @@ -2736,8 +2736,8 @@ - Monitoring for radiation dose or quality within a man-made or constructed environment such as a building or a vehicle. - anthropogenic environment radiation monitoring + Monitoring for radiation dose or quality within a man-made or constructed environment such as a building or a vehicle. + anthropogenic environment radiation monitoring @@ -2747,8 +2747,8 @@ - Monitoring for radiation dose or quality within a natural environment. - natural environment radiation monitoring + Monitoring for radiation dose or quality within a natural environment. + natural environment radiation monitoring @@ -2757,8 +2757,8 @@ - Atomic nuclei, with atomic number 2 or greater and kinetic energy imparted by natural or artificial means - heavy ion radiation + Atomic nuclei, with atomic number 2 or greater and kinetic energy imparted by natural or artificial means + heavy ion radiation @@ -2767,8 +2767,8 @@ - Atomic nuclei, variously defined as having atomic number 2, 3, 4, 5 or 6 and kinetic energy imparted by natural or artificial means - light ion radiation + Atomic nuclei, variously defined as having atomic number 2, 3, 4, 5 or 6 and kinetic energy imparted by natural or artificial means + light ion radiation @@ -2777,8 +2777,8 @@ - A particle with a positive or negative electric charge - charged particle + A particle with a positive or negative electric charge + charged particle @@ -2787,11 +2787,11 @@ - space flight - Activity carried out by crewed or robotic vehicles outside the Earth's atmmosphere. - spaceflight - Space flight - space flight + space flight + Activity carried out by crewed or robotic vehicles outside the Earth's atmmosphere. + spaceflight + Space flight + space flight @@ -2800,9 +2800,9 @@ - The amount of energy from any type of ionizing radiation deposited in a specified mass of any medium. - Jack Miller - absorbed radiation dose + The amount of energy from any type of ionizing radiation deposited in a specified mass of any medium. + Jack Miller + absorbed radiation dose @@ -2811,9 +2811,9 @@ - The amount of energy from any type of ionizing radiation deposited in a specified mass of any medium per unit time. - Jack Miller - absorbed radiation dose rate + The amount of energy from any type of ionizing radiation deposited in a specified mass of any medium per unit time. + Jack Miller + absorbed radiation dose rate @@ -2822,9 +2822,9 @@ - The kinetic energy carried by a particle or photon of ionizing radiation. - Jack Miller - ionizing radiation energy + The kinetic energy carried by a particle or photon of ionizing radiation. + Jack Miller + ionizing radiation energy @@ -2833,12 +2833,12 @@ - x-ray - Electromagnetic radiation with photon energies approximately between 0.1 and 120 keV. The upper end of the x-ray spectrum overlaps with the lower end of the gamma ray spectrum. - Jack Miller - x-ray - http://son.nasa.gov/tass/content/electrospectrum.htm - x-ray radiation + x-ray + Electromagnetic radiation with photon energies approximately between 0.1 and 120 keV. The upper end of the x-ray spectrum overlaps with the lower end of the gamma ray spectrum. + Jack Miller + x-ray + http://son.nasa.gov/tass/content/electrospectrum.htm + x-ray radiation @@ -2847,9 +2847,9 @@ - A material entity which emits radiation - Jack Miller - radiation source + A material entity which emits radiation + Jack Miller + radiation source @@ -2858,11 +2858,11 @@ - sham irradiation - Sham irradiation refers to a procedure in which participants or subjects in an experiment are exposed to simulated radiation, mimicking precisely the conditions of actual irradiation. The purpose of using sham irradiation is to create a control group that experiences the non-specific effects of the experimental setup, while excluding the specific effects associated with radiation exposure. - Jack Miller - sham - sham irradiation + sham irradiation + Sham irradiation refers to a procedure in which participants or subjects in an experiment are exposed to simulated radiation, mimicking precisely the conditions of actual irradiation. The purpose of using sham irradiation is to create a control group that experiences the non-specific effects of the experimental setup, while excluding the specific effects associated with radiation exposure. + Jack Miller + sham + sham irradiation @@ -2871,11 +2871,11 @@ - fractionation protocol - A protocol for administering a total radiation dose in two or more increments separated by a specified time interval - Jack Miller - fractionation protocol - radiation fractionation protocol + fractionation protocol + A protocol for administering a total radiation dose in two or more increments separated by a specified time interval + Jack Miller + fractionation protocol + radiation fractionation protocol @@ -2884,10 +2884,10 @@ - cis-lunar space - The region of space between the Earth and the Moon - Jack Miller - cis-lunar space + cis-lunar space + The region of space between the Earth and the Moon + Jack Miller + cis-lunar space @@ -2896,10 +2896,10 @@ - lunar orbit - A region of space defined by a regular, repeating path of a specified object about Earth's moon - Jack Miller - lunar orbit + lunar orbit + A region of space defined by a regular, repeating path of a specified object about Earth's moon + Jack Miller + lunar orbit @@ -2908,10 +2908,10 @@ - lunar surface - The area of the lunar landmass exposed to space - Jack Miller - lunar surface + lunar surface + The area of the lunar landmass exposed to space + Jack Miller + lunar surface @@ -2920,10 +2920,10 @@ - cis-Mars space - The region of space between the Earth and Mars - Jack Miller - cis-mars space + cis-Mars space + The region of space between the Earth and Mars + Jack Miller + cis-mars space @@ -2932,10 +2932,10 @@ - Mars orbit - A region of space defined by a regular, repeating path of a specified object about Mars - Jack Miller - mars orbit + Mars orbit + A region of space defined by a regular, repeating path of a specified object about Mars + Jack Miller + mars orbit @@ -2944,10 +2944,10 @@ - Mars surface - The area of the Mars landmass exposed to the Martian atmosphere - Jack Miller - mars surface + Mars surface + The area of the Mars landmass exposed to the Martian atmosphere + Jack Miller + mars surface @@ -2956,10 +2956,10 @@ - interplanetary space - The region of space in the Solar System between planets - Jack Miller - interplanetary space + interplanetary space + The region of space in the Solar System between planets + Jack Miller + interplanetary space @@ -2968,10 +2968,10 @@ - planet surface - The outermost solid or liquid area of a planet - Jack Miller - planet surface + planet surface + The outermost solid or liquid area of a planet + Jack Miller + planet surface @@ -2980,10 +2980,10 @@ - non-irradiated - An organism or material entity kept unexposed to radiation, for purposes of comparison to a similar organism or material entity that has been exposed to radiation - Jack Miller - non-irradiated + non-irradiated + An organism or material entity kept unexposed to radiation, for purposes of comparison to a similar organism or material entity that has been exposed to radiation + Jack Miller + non-irradiated @@ -2992,11 +2992,11 @@ - ground analog experiment - A study at a ground facility designed so as to replicate one or more conditions in space (e.g. radiation, microgravity, isolation) - Jack Miller - ground analog - ground analog study + ground analog experiment + A study at a ground facility designed so as to replicate one or more conditions in space (e.g. radiation, microgravity, isolation) + Jack Miller + ground analog + ground analog study @@ -3005,11 +3005,11 @@ - ground control - An study at a ground facility designed so as to replicate conditions in space (e.g. radiation, microgravity, isolation) with the exception of one condition, so as to ascertain the effects of that condition on an organism or instrument - Jack Miller - ground control - ground control study + ground control + An study at a ground facility designed so as to replicate conditions in space (e.g. radiation, microgravity, isolation) with the exception of one condition, so as to ascertain the effects of that condition on an organism or instrument + Jack Miller + ground control + ground control study @@ -3018,10 +3018,10 @@ - irradiation protocol - A protocol for administering radiation to a sample - Jack Miller - irradiation protocol + irradiation protocol + A protocol for administering radiation to a sample + Jack Miller + irradiation protocol @@ -3030,11 +3030,11 @@ - radiation fraction - One of the series of individual doses administered to a sample in a fractionated irradiation. - Jack Miller - fraction - radiation fraction + radiation fraction + One of the series of individual doses administered to a sample in a fractionated irradiation. + Jack Miller + fraction + radiation fraction @@ -3043,10 +3043,10 @@ - radiation fraction interval - Time between fractions in a fractionated irradiation. - Jack Miller - radiation fraction interval + radiation fraction interval + Time between fractions in a fractionated irradiation. + Jack Miller + radiation fraction interval @@ -3055,11 +3055,11 @@ - high altitude - The region of the atmosphere above 8000 feet above sea level. Altitudes above 12000 feet are sometimes referred to as very high altitude, and above 18000 feet as extremely high altitude. - Jack Miller - https://www.medicinenet.com/high_altitude/definition.htm - high altitude + high altitude + The region of the atmosphere above 8000 feet above sea level. Altitudes above 12000 feet are sometimes referred to as very high altitude, and above 18000 feet as extremely high altitude. + Jack Miller + https://www.medicinenet.com/high_altitude/definition.htm + high altitude @@ -3068,11 +3068,11 @@ - sham - The class should be used in cases where it is clear that the control sample was treated in precisely the same way as the experimental samples or sham irradiation is specified. It is therefore a more restricted quality definition than "non-irradiated". It is likely to be used more often with external radiation exposure or exposure to a beam, and with a biological rather than abiotic sample. - A quality of a biotic or abiotic sample or individual which is part of an experiment that tests the effects of radiation on organisms or materials by isolating variables as dictated by the scientific method in order to make a conclusion about the effect of such variables. In sham irradiation the precise treatment of the sample must be identical to that of the experimental samples and should be made explicit in the description of the method. - Jack Miller - sham-irradiated + sham + The class should be used in cases where it is clear that the control sample was treated in precisely the same way as the experimental samples or sham irradiation is specified. It is therefore a more restricted quality definition than "non-irradiated". It is likely to be used more often with external radiation exposure or exposure to a beam, and with a biological rather than abiotic sample. + A quality of a biotic or abiotic sample or individual which is part of an experiment that tests the effects of radiation on organisms or materials by isolating variables as dictated by the scientific method in order to make a conclusion about the effect of such variables. In sham irradiation the precise treatment of the sample must be identical to that of the experimental samples and should be made explicit in the description of the method. + Jack Miller + sham-irradiated @@ -3081,11 +3081,11 @@ - parabolic flight - An aircraft which flies a series of parabolic arcs to simulate micrgravity. - Jack Miller - Vomit Comet - parabolic flight aircraft + parabolic flight + An aircraft which flies a series of parabolic arcs to simulate micrgravity. + Jack Miller + Vomit Comet + parabolic flight aircraft @@ -3094,9 +3094,9 @@ - An aircraft which flies at altitudes greater than commercial aircraft altitudes for research purposes. - Jack Miller - high altitude research aircraft + An aircraft which flies at altitudes greater than commercial aircraft altitudes for research purposes. + Jack Miller + high altitude research aircraft @@ -3105,11 +3105,11 @@ - UAV - An research aircraft designed to operate without crew members, either autonomously or under control from a ground station - Jack Miller - UAV - uncrewed aerial vehicle + UAV + An research aircraft designed to operate without crew members, either autonomously or under control from a ground station + Jack Miller + UAV + uncrewed aerial vehicle @@ -3118,12 +3118,12 @@ - HZE - Fully ionized atomic nucleus with 2 or more protons and energies in excess of tens of MeV per nucleon - Jack Miller - HZE - highly charged energetic nuclei - highly charged energetic nucleus + HZE + Fully ionized atomic nucleus with 2 or more protons and energies in excess of tens of MeV per nucleon + Jack Miller + HZE + highly charged energetic nuclei + highly charged energetic nucleus @@ -3132,10 +3132,10 @@ - A study of a response to radiation conditioned by prior administration of radiation of a different type and/or at a different dose or dose rate - Jack Miller - adaptive - adaptive radiation response study + A study of a response to radiation conditioned by prior administration of radiation of a different type and/or at a different dose or dose rate + Jack Miller + adaptive + adaptive radiation response study @@ -3144,9 +3144,9 @@ - The total dose administered in a series of radiation fractions divided by the elapsed time between the beginning of the first exposure fraction and the end of the last exposure fraction - Jack Miller - average fractionated dose rate + The total dose administered in a series of radiation fractions divided by the elapsed time between the beginning of the first exposure fraction and the end of the last exposure fraction + Jack Miller + average fractionated dose rate @@ -3155,9 +3155,9 @@ - A device which exposes samples to gamma radiation. - Jack Miller - gamma irradiator + A device which exposes samples to gamma radiation. + Jack Miller + gamma irradiator @@ -3166,10 +3166,10 @@ - charge - The electric charge of a particle used in an irradiation - Jack Miller - particle charge + charge + The electric charge of a particle used in an irradiation + Jack Miller + particle charge @@ -3178,9 +3178,9 @@ - The measurement of the amount of radiation taken up by a sample. - Jack Miller - radiation dosimetry + The measurement of the amount of radiation taken up by a sample. + Jack Miller + radiation dosimetry @@ -3189,10 +3189,10 @@ - A microbeam is a narrow beam of radiation, of micrometer or sub-micrometer dimensions. Together with integrated imaging techniques, microbeams allow precisely defined quantities of damage to be introduced at precisely defined locations. - Jack Miller - Wikipedia - microbeam + A microbeam is a narrow beam of radiation, of micrometer or sub-micrometer dimensions. Together with integrated imaging techniques, microbeams allow precisely defined quantities of damage to be introduced at precisely defined locations. + Jack Miller + Wikipedia + microbeam @@ -3201,12 +3201,12 @@ - mGy/sec - A derived absorbed dose unit which is equal to one milligray absorbed per second - mGy/sec - UO:0010065 - miligray per second - TRUE + mGy/sec + A derived absorbed dose unit which is equal to one milligray absorbed per second + mGy/sec + UO:0010065 + miligray per second + TRUE @@ -3215,11 +3215,11 @@ - Indirect cellular response to stimulus - This could be used to describe a tissue response to immune stimulation, so for example an IL2 response of endothelial cells in response to lymphocytes stimulated by pathogen. - Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus which acts on another cell and not on the responding cell. The process begins with detection of the stimulus by a cell and ends with a change in state or activity of a different cell - Paul Schofield - indirect cellular response to stimulus + Indirect cellular response to stimulus + This could be used to describe a tissue response to immune stimulation, so for example an IL2 response of endothelial cells in response to lymphocytes stimulated by pathogen. + Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus which acts on another cell and not on the responding cell. The process begins with detection of the stimulus by a cell and ends with a change in state or activity of a different cell + Paul Schofield + indirect cellular response to stimulus @@ -3228,10 +3228,10 @@ - The most obvious example is the bystander effect ( Carmel Mothersill, Andrej Rusin, Cristian Fernandez-Palomo & Colin Seymour (2018) History of bystander effects research 1905-present; what is in a name?, International Journal of Radiation Biology, 94:8, 696-707, DOI: 10.1080/09553002.2017.1398436) where a naive cell behaves as if it has been irradiated because of its communication with an irradiated cell. It may also be used to describe the abscopal effect. Note that abscopal effects have been noted for ionising and non-ionising ( RF) radiation, eg. L?ffler MW. et al. . A Non-interventional Clinical Trial Assessing Immune Responses After Radiofrequency Ablation of Liver Metastases From Colorectal Cancer. Front Immunol. 2019 Nov 19;10:2526. doi: 10.3389/fimmu.2019.02526. PMID: 31803175; PMCID: PMC6877671 - Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of radiation acting on another cell and not on the responding cell. The process begins with detection of radiation by a cell or cells and ends with a change in state or activity of a different cell or cells. - Paul Schofield - indirect cellular response to radiation + The most obvious example is the bystander effect ( Carmel Mothersill, Andrej Rusin, Cristian Fernandez-Palomo & Colin Seymour (2018) History of bystander effects research 1905-present; what is in a name?, International Journal of Radiation Biology, 94:8, 696-707, DOI: 10.1080/09553002.2017.1398436) where a naive cell behaves as if it has been irradiated because of its communication with an irradiated cell. It may also be used to describe the abscopal effect. Note that abscopal effects have been noted for ionising and non-ionising ( RF) radiation, eg. L?ffler MW. et al. . A Non-interventional Clinical Trial Assessing Immune Responses After Radiofrequency Ablation of Liver Metastases From Colorectal Cancer. Front Immunol. 2019 Nov 19;10:2526. doi: 10.3389/fimmu.2019.02526. PMID: 31803175; PMCID: PMC6877671 + Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of radiation acting on another cell and not on the responding cell. The process begins with detection of radiation by a cell or cells and ends with a change in state or activity of a different cell or cells. + Paul Schofield + indirect cellular response to radiation @@ -3240,10 +3240,10 @@ - Directly describes the bystander effect (Carmel Mothersill, Andrej Rusin, Cristian Fernandez-Palomo & Colin Seymour (2018) History of bystander effects research 1905-present; what is in a name?, International Journal of Radiation Biology, 94:8, 696-707, DOI: 10.1080/09553002.2017.1398436) but can alo sbe used to describe phenomena related to the abscopal effect, manifest in whole organisms where irradiation of one part of the organism causes changes in another un-irradiated component. - Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to ionising radiation which acts on another cell and not on the responding cell. The process begins with detection of the ionising radiation by one cell or cells and ends with a change in state or activity of a different cell or cells. - Paul Schofield - indirect cellular response to ionising radiation + Directly describes the bystander effect (Carmel Mothersill, Andrej Rusin, Cristian Fernandez-Palomo & Colin Seymour (2018) History of bystander effects research 1905-present; what is in a name?, International Journal of Radiation Biology, 94:8, 696-707, DOI: 10.1080/09553002.2017.1398436) but can alo sbe used to describe phenomena related to the abscopal effect, manifest in whole organisms where irradiation of one part of the organism causes changes in another un-irradiated component. + Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to ionising radiation which acts on another cell and not on the responding cell. The process begins with detection of the ionising radiation by one cell or cells and ends with a change in state or activity of a different cell or cells. + Paul Schofield + indirect cellular response to ionising radiation @@ -3252,8 +3252,8 @@ - A device for exposing materials or biological organisms to ionizing radiation for research or therapeutic purposes. - ionizing radiation device + A device for exposing materials or biological organisms to ionizing radiation for research or therapeutic purposes. + ionizing radiation device @@ -3262,10 +3262,10 @@ - High-altitude balloons are crewed or uncrewed balloons, usually filled with helium or hydrogen, that are released into the stratosphere, generally attaining between 18 and 37 km (11 and 23 mi; 59,000 and 121,000 ft) above sea level. - Jack Miller - Wikipedia - high-altitude balloon + High-altitude balloons are crewed or uncrewed balloons, usually filled with helium or hydrogen, that are released into the stratosphere, generally attaining between 18 and 37 km (11 and 23 mi; 59,000 and 121,000 ft) above sea level. + Jack Miller + Wikipedia + high-altitude balloon @@ -3274,10 +3274,10 @@ - spaceflight - Travel beyond the Earth's atmosphere - Jack Miller - space flight + spaceflight + Travel beyond the Earth's atmosphere + Jack Miller + space flight @@ -3286,12 +3286,12 @@ - non-targeted effects of ionising radiation - Non-targeted effects of ionising radiation are characterised by cellular responses that occur in cells in which energy from ionizing radiation has not been deposited. The distinct classes of non-targeted effects include Genomic Instability, and Bystander effect which latter includes Abscopal effects and Bystander-mediated adaptive response. These can also arise non-clonally in the progeny of irradiated somatic or germ cells, resulting in radiation-induced genomic instability and transgenerational genomic instability respectively. (Kadhim M, Salomaa S, Wright E, et al. Non-targeted effects of ionising radiation--implications for low dose risk. Mutat Res. 2013;752(2):84-98. doi:10.1016/j.mrrev.2012.12.001) - Paul Schofield ORCID: 0000-0002-5111-7263 - NTE - non-targeted effects - non-targeted effects of ionising radiation + non-targeted effects of ionising radiation + Non-targeted effects of ionising radiation are characterised by cellular responses that occur in cells in which energy from ionizing radiation has not been deposited. The distinct classes of non-targeted effects include Genomic Instability, and Bystander effect which latter includes Abscopal effects and Bystander-mediated adaptive response. These can also arise non-clonally in the progeny of irradiated somatic or germ cells, resulting in radiation-induced genomic instability and transgenerational genomic instability respectively. (Kadhim M, Salomaa S, Wright E, et al. Non-targeted effects of ionising radiation--implications for low dose risk. Mutat Res. 2013;752(2):84-98. doi:10.1016/j.mrrev.2012.12.001) + Paul Schofield ORCID: 0000-0002-5111-7263 + NTE + non-targeted effects + non-targeted effects of ionising radiation @@ -3300,8 +3300,8 @@ - That energy which is transferred in space and time as part of the process of radiation (ENVO:01001023). - radiation + That energy which is transferred in space and time as part of the process of radiation (ENVO:01001023). + radiation @@ -3310,8 +3310,8 @@ - Uncharged particles with kinetic energy imparted by natural or artificial means (such as by a particle accelerator) - neutral particle radiation + Uncharged particles with kinetic energy imparted by natural or artificial means (such as by a particle accelerator) + neutral particle radiation @@ -3320,10 +3320,10 @@ - An assay of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers - See H.H. Rossi, Microdosimetry and Radiobiology, Radiation Protection Dosimetry, Volume 13, Issue 1-4, 1 December 1985, Pages 259�265, https://doi.org/10.1093/rpd/13.1-4.259 and Gustavo A. Santa Cruz,Microdosimetry: Principles and applications,Reports of Practical Oncology & Radiotherapy,Volume 21, Issue 2,2016,Pages 135-139,ISSN 1507-1367,https://doi.org/10.1016/j.rpor.2014.10.006. - Usually a track structure assay at nm scale - nanodosimetry assay + An assay of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers + See H.H. Rossi, Microdosimetry and Radiobiology, Radiation Protection Dosimetry, Volume 13, Issue 1-4, 1 December 1985, Pages 259�265, https://doi.org/10.1093/rpd/13.1-4.259 and Gustavo A. Santa Cruz,Microdosimetry: Principles and applications,Reports of Practical Oncology & Radiotherapy,Volume 21, Issue 2,2016,Pages 135-139,ISSN 1507-1367,https://doi.org/10.1016/j.rpor.2014.10.006. + Usually a track structure assay at nm scale + nanodosimetry assay @@ -3332,10 +3332,10 @@ - An assay of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 micrometers - See H.H. Rossi, Microdosimetry and Radiobiology, Radiation Protection Dosimetry, Volume 13, Issue 1-4, 1 December 1985, Pages 259�265, https://doi.org/10.1093/rpd/13.1-4.259 and Gustavo A. Santa Cruz,Microdosimetry: Principles and applications,Reports of Practical Oncology & Radiotherapy,Volume 21, Issue 2,2016,Pages 135-139,ISSN 1507-1367,https://doi.org/10.1016/j.rpor.2014.10.006. - Usually a track structure assay at micrometre scale - microdosimetry assay + An assay of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 micrometers + See H.H. Rossi, Microdosimetry and Radiobiology, Radiation Protection Dosimetry, Volume 13, Issue 1-4, 1 December 1985, Pages 259�265, https://doi.org/10.1093/rpd/13.1-4.259 and Gustavo A. Santa Cruz,Microdosimetry: Principles and applications,Reports of Practical Oncology & Radiotherapy,Volume 21, Issue 2,2016,Pages 135-139,ISSN 1507-1367,https://doi.org/10.1016/j.rpor.2014.10.006. + Usually a track structure assay at micrometre scale + microdosimetry assay @@ -3344,11 +3344,11 @@ - Nuclear decay in which an alpha particle is emitted. - https://goldbook.iupac.org/terms/view/A00005 - http://purl.obolibrary.org/obo/REX_0000017 - alpha-decay - alpha decay + Nuclear decay in which an alpha particle is emitted. + https://goldbook.iupac.org/terms/view/A00005 + http://purl.obolibrary.org/obo/REX_0000017 + alpha-decay + alpha decay @@ -3357,11 +3357,11 @@ - Radioactive decay in which a beta particle is emitted or in which orbital electron capture occurs. - http://goldbook.iupac.org/B00572.html - http://purl.obolibrary.org/obo/REX_0000007 - beta-decay - beta decay + Radioactive decay in which a beta particle is emitted or in which orbital electron capture occurs. + http://goldbook.iupac.org/B00572.html + http://purl.obolibrary.org/obo/REX_0000007 + beta-decay + beta decay @@ -3370,8 +3370,8 @@ - Processes in which electrons or components of the atomic nucleus are participants. - subatomic process + Processes in which electrons or components of the atomic nucleus are participants. + subatomic process @@ -3380,8 +3380,8 @@ - Measurement of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers - nanodosimetric measurement datum + Measurement of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers + nanodosimetric measurement datum @@ -3390,8 +3390,8 @@ - In microdosimetry the specific energy, z, is the energy deposited by radiation ( in one or more deposition events) in a specified micrometric (or smaller) site divided my the mass of the site. Measured in Gy. - specific energy measurement datum + In microdosimetry the specific energy, z, is the energy deposited by radiation ( in one or more deposition events) in a specified micrometric (or smaller) site divided my the mass of the site. Measured in Gy. + specific energy measurement datum @@ -3400,8 +3400,8 @@ - The path of a particle in matter, delineated by sites where the particle deposits energy. - particle track + The path of a particle in matter, delineated by sites where the particle deposits energy. + particle track @@ -3410,8 +3410,8 @@ - A pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers. - nanodosimetry + A pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 nanometers. + nanodosimetry @@ -3420,8 +3420,8 @@ - The complete set of spatial coordinates of energy deposition events along a particle track in matter - particle track structure + The complete set of spatial coordinates of energy deposition events along a particle track in matter + particle track structure @@ -3430,8 +3430,8 @@ - A group of ionization events closely related in time and space, occurring in a specified target volume and originating from a single primary ionizing particle. - ionization cluster + A group of ionization events closely related in time and space, occurring in a specified target volume and originating from a single primary ionizing particle. + ionization cluster @@ -3440,8 +3440,8 @@ - Measurement of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 micrometers. - microdosimetric measurement datum + Measurement of the pattern (frequency and spatial distribution) of ionization events produced by energy deposition in time and space in a substance characterized by linear dimensions of the order of 1-100 micrometers. + microdosimetric measurement datum @@ -3450,8 +3450,8 @@ - A volume of matter characterised by linear dimensions of the order of 0.5- 10's of microns, referred to as the "site" in microdosimetry. - micrometric volume + A volume of matter characterised by linear dimensions of the order of 0.5- 10's of microns, referred to as the "site" in microdosimetry. + micrometric volume @@ -3460,9 +3460,9 @@ - A control specimen role of a biotic or abiotic sample or individual describes a specimen by its purpose, and therefore treatment, within a planned experimental process that tests hypotheses by isolating variables as dictated by the scientific method in order to make a conclusion about the effect of such variables. The quality of control inhering in the sample role exists as a result of the historical treatment of the sample. In a controlled experiment, two or more virtually identical experiments are conducted, but the factor being tested is varied in only one of them. This serves to isolate any causal phenomena. A control may have been subject to treatments during the experiment that might alter its state or behaviour and is therefore distinguishable from the sample as initial input into the experiment. However such treatments should in all cases but that of the variable under scrutiny, be the same as the experimental sample. - http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C64355 - control specimen role + A control specimen role of a biotic or abiotic sample or individual describes a specimen by its purpose, and therefore treatment, within a planned experimental process that tests hypotheses by isolating variables as dictated by the scientific method in order to make a conclusion about the effect of such variables. The quality of control inhering in the sample role exists as a result of the historical treatment of the sample. In a controlled experiment, two or more virtually identical experiments are conducted, but the factor being tested is varied in only one of them. This serves to isolate any causal phenomena. A control may have been subject to treatments during the experiment that might alter its state or behaviour and is therefore distinguishable from the sample as initial input into the experiment. However such treatments should in all cases but that of the variable under scrutiny, be the same as the experimental sample. + http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C64355 + control specimen role @@ -3471,9 +3471,9 @@ - Sham irradiation in which an identical irradiation protocol (with the exception of the administration of the radiation exposure) is not followed in every respect. - Use approximate sham irradiation when at least one aspect of the irradiation (with the exception of the administration of the radiation exposure) is not followed precisely. For example, Not placing an organism or sample in a beam line for the same length of time as the irradiated organism(s) or sample(s) were left in the beam. - approximate sham irradiation + Sham irradiation in which an identical irradiation protocol (with the exception of the administration of the radiation exposure) is not followed in every respect. + Use approximate sham irradiation when at least one aspect of the irradiation (with the exception of the administration of the radiation exposure) is not followed precisely. For example, Not placing an organism or sample in a beam line for the same length of time as the irradiated organism(s) or sample(s) were left in the beam. + approximate sham irradiation @@ -3482,9 +3482,9 @@ - Experimental internal radiation exposure of rodents to radon gas through inhalation. - Exposure to an inhaled, ingested, injected or implanted source of radiation of any origin as part of a planned or accidental process. - internal radiation exposure + Experimental internal radiation exposure of rodents to radon gas through inhalation. + Exposure to an inhaled, ingested, injected or implanted source of radiation of any origin as part of a planned or accidental process. + internal radiation exposure @@ -3493,10 +3493,10 @@ - Mice exposed to external radiation from a Sr source. - Exposure to an external source of radiation of any origin or type. - https://orcid.org/0000-0002-5111-7263 - external radiation exposure + Mice exposed to external radiation from a Sr source. + Exposure to an external source of radiation of any origin or type. + https://orcid.org/0000-0002-5111-7263 + external radiation exposure @@ -3505,9 +3505,9 @@ - Sham irradiation in which an identical irradiation protocol is followed in every respect, with the exception of the administration of the radiation exposure. - Use complete sham irradiation when all steps of an irradiation protocol are followed for sham control group (with the exception of administration of the radiation exposure). - complete sham irradiation + Sham irradiation in which an identical irradiation protocol is followed in every respect, with the exception of the administration of the radiation exposure. + Use complete sham irradiation when all steps of an irradiation protocol are followed for sham control group (with the exception of administration of the radiation exposure). + complete sham irradiation @@ -3517,10 +3517,10 @@ - Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally by the ingestion, inhalation or implantation of a source of radiation. - https://orcid.org/0000-0002-5111-7263 - Research subjects participating in a clinical trial using an internally implanted radiation source have an internal experimental radiation exposure - internal experimental radiation exposure + Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally by the ingestion, inhalation or implantation of a source of radiation. + https://orcid.org/0000-0002-5111-7263 + Research subjects participating in a clinical trial using an internally implanted radiation source have an internal experimental radiation exposure + internal experimental radiation exposure @@ -3529,8 +3529,8 @@ - The direct or indirect transfer of energy from radiation to a medium through ionisation or excitation of the atoms of the medium. - energy deposition event + The direct or indirect transfer of energy from radiation to a medium through ionisation or excitation of the atoms of the medium. + energy deposition event @@ -3539,7 +3539,7 @@ - track formation + track formation @@ -3548,10 +3548,10 @@ - A mixed irradiation study typically involves exposing a sample or system to a combination of different types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. - http://orcid.org/0000-0002-5111-7263 - https://orcid.org/0000-0001-9227-0670 - mixed irradiation study + A mixed irradiation study typically involves exposing a sample or system to a combination of different types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. + http://orcid.org/0000-0002-5111-7263 + https://orcid.org/0000-0001-9227-0670 + mixed irradiation study @@ -3560,10 +3560,10 @@ - A mixed ion and photon irradiation study typically involves exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. - http://orcid.org/0000-0002-5111-7263 - https://orcid.org/0000-0001-9227-0670 - mixed ion and photon irradiation study + A mixed ion and photon irradiation study typically involves exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. + http://orcid.org/0000-0002-5111-7263 + https://orcid.org/0000-0001-9227-0670 + mixed ion and photon irradiation study @@ -3572,10 +3572,10 @@ - A mixed ion and photon simultaneous irradiation study typically involves simultaneously exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. - http://orcid.org/0000-0002-5111-7263 - https://orcid.org/0000-0001-9227-0670 - mixed ion and photon simultaneous irradiation study + A mixed ion and photon simultaneous irradiation study typically involves simultaneously exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. + http://orcid.org/0000-0002-5111-7263 + https://orcid.org/0000-0001-9227-0670 + mixed ion and photon simultaneous irradiation study @@ -3584,10 +3584,10 @@ - A mixed ion and photon sequential irradiation study typically involves sequentially exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. - http://orcid.org/0000-0002-5111-7263 - https://orcid.org/0000-0001-9227-0670 - mixed ion and photon sequential irradiation study + A mixed ion and photon sequential irradiation study typically involves sequentially exposing a sample or system to a combination of these types of radiation. This could include exposure to various forms of ionizing radiation, such as gamma rays, X-rays, and particle radiation. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. + http://orcid.org/0000-0002-5111-7263 + https://orcid.org/0000-0001-9227-0670 + mixed ion and photon sequential irradiation study @@ -3596,11 +3596,11 @@ - A multiple ion irradiation study typically involves exposing a sample or system to a combination of different types of charged particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. - http://orcid.org/0000-0002-5111-7263 - https://orcid.org/0000-0001-9227-0670 - multiple ion mixed irradiation study - multiple ion irradiation study + A multiple ion irradiation study typically involves exposing a sample or system to a combination of different types of charged particle radiation. Exposure might be simultaneous or sequential and from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. + http://orcid.org/0000-0002-5111-7263 + https://orcid.org/0000-0001-9227-0670 + multiple ion mixed irradiation study + multiple ion irradiation study @@ -3609,10 +3609,10 @@ - A multiple ion simultaneous irradiation study typically involves simultaneously exposing a sample or system to a combination of ions. This could include exposure to various forms of particle radiation, for example ion beams. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. - http://orcid.org/0000-0002-5111-7263 - https://orcid.org/0000-0001-9227-0670 - multiple ion simultaneous irradiation study + A multiple ion simultaneous irradiation study typically involves simultaneously exposing a sample or system to a combination of ions. This could include exposure to various forms of particle radiation, for example ion beams. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. + http://orcid.org/0000-0002-5111-7263 + https://orcid.org/0000-0001-9227-0670 + multiple ion simultaneous irradiation study @@ -3621,10 +3621,10 @@ - A multiple ion sequential irradiation study involves exposing a sample or system to a combination of different ions. This could include exposure to various forms of particle radiation such as ion beams. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. - http://orcid.org/0000-0002-5111-7263 - https://orcid.org/0000-0001-9227-0670 - multiple ion sequential irradiation study + A multiple ion sequential irradiation study involves exposing a sample or system to a combination of different ions. This could include exposure to various forms of particle radiation such as ion beams. Exposure might be from anthropogenic or natural sources of radiation. The goal is to understand how the different types of radiation interact with each other and their combined effects on the material or biological system under investigation. + http://orcid.org/0000-0002-5111-7263 + https://orcid.org/0000-0001-9227-0670 + multiple ion sequential irradiation study @@ -3633,14 +3633,14 @@ - ALARA - One of the measures to ensure ALARA is to minimize the time spent working around radioactive materials. - A principle of radiation protection philosophy that requires that exposures to ionizing radiation be kept as low as reasonably achievable, economic and social factors being taken into account. The protection from radiation exposure is ALARA when the expen - Jack Miller - ALARA - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - ALARA - as low as reasonably achievable + ALARA + One of the measures to ensure ALARA is to minimize the time spent working around radioactive materials. + A principle of radiation protection philosophy that requires that exposures to ionizing radiation be kept as low as reasonably achievable, economic and social factors being taken into account. The protection from radiation exposure is ALARA when the expen + Jack Miller + ALARA + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + ALARA + as low as reasonably achievable @@ -3649,11 +3649,11 @@ - Attenuation in concrete or leadshielding is a common method of radiation protection on Earth, but is impractical in space due to mass constraints. - The reduction of radiation intensity upon passage of radiation through matter - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - radiation attenuation + Attenuation in concrete or leadshielding is a common method of radiation protection on Earth, but is impractical in space due to mass constraints. + The reduction of radiation intensity upon passage of radiation through matter + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + radiation attenuation @@ -3662,11 +3662,11 @@ - Biodosimetry was used to measure the exposure of some victims of the Chernobyl nuclear accident. - Use of a biological response as an indicator of a dose of an effective agent (e.g., the extent of decline in peripheral blood lymphocytes of humans exposed to ionizing radiation can be used as an indicator of the absorbed dose to the whole body from that - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - biodosimetry + Biodosimetry was used to measure the exposure of some victims of the Chernobyl nuclear accident. + Use of a biological response as an indicator of a dose of an effective agent (e.g., the extent of decline in peripheral blood lymphocytes of humans exposed to ionizing radiation can be used as an indicator of the absorbed dose to the whole body from that + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + biodosimetry @@ -3675,11 +3675,11 @@ - The bystander effect can be studied by identifying cells that were traversed by a charged particle. - The term used to describe the effects on cells in proximity to irradiated cells, but through which radiation has not passed. In experimental radiation biology, the bystander effect can be investigated by targeting individual cells, or by using doses low enough that the probability for a given cell to be hit by a particle is less than one. - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - bystander effect + The bystander effect can be studied by identifying cells that were traversed by a charged particle. + The term used to describe the effects on cells in proximity to irradiated cells, but through which radiation has not passed. In experimental radiation biology, the bystander effect can be investigated by targeting individual cells, or by using doses low enough that the probability for a given cell to be hit by a particle is less than one. + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + bystander effect @@ -3688,13 +3688,13 @@ - Delta ray energies increase with the velocity of the incident particle. - Highly energetic electrons produced during inelastic collisions between ionizing radiation and atomic electrons. In a small proportion of collisions, the ejected electron receives a considerable amount of energy (i.e., >1,000 eV), allowing it to travel a - Jack Miller - delta electron - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - delta electron - delta ray + Delta ray energies increase with the velocity of the incident particle. + Highly energetic electrons produced during inelastic collisions between ionizing radiation and atomic electrons. In a small proportion of collisions, the ejected electron receives a considerable amount of energy (i.e., >1,000 eV), allowing it to travel a + Jack Miller + delta electron + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + delta electron + delta ray @@ -3703,11 +3703,11 @@ - The average annual dose equivalent for crew members on the ISS is approximately 300 mSv. - The product of the absorbed dose (D) at a point and the quality factor (Q) at that point for the radiation type (i.e., H = DQ). The unit of H is J-kg^[-1] with the special name sievert (Sv) - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - dose equivalent + The average annual dose equivalent for crew members on the ISS is approximately 300 mSv. + The product of the absorbed dose (D) at a point and the quality factor (Q) at that point for the radiation type (i.e., H = DQ). The unit of H is J-kg^[-1] with the special name sievert (Sv) + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + dose equivalent @@ -3716,10 +3716,10 @@ - The increased risk from induced cancer due to exposure when the effects over an entire lifetime are accounted for. Individuals who would have died of cancer anyway but die early because of exposure are not included - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - excess lifetime risk of cancer + The increased risk from induced cancer due to exposure when the effects over an entire lifetime are accounted for. Individuals who would have died of cancer anyway but die early because of exposure are not included + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + excess lifetime risk of cancer @@ -3728,11 +3728,11 @@ - The sample was irradiated with fast neutrons. - Neutrons of energies above a few hundred kiloelectron volts (keV) - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - fast neutron + The sample was irradiated with fast neutrons. + Neutrons of energies above a few hundred kiloelectron volts (keV) + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + fast neutron @@ -3741,11 +3741,11 @@ - The value of the fluence was approximately 1 particle per cm2. - The number of particles or photons per unit of cross-sectional area perpendicular to the direction of the particle (units of m^2 or cm^2) (i.e., particles-m^[-2] or particles-cm^[-2]). - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - fluence + The value of the fluence was approximately 1 particle per cm2. + The number of particles or photons per unit of cross-sectional area perpendicular to the direction of the particle (units of m^2 or cm^2) (i.e., particles-m^[-2] or particles-cm^[-2]). + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + fluence @@ -3754,11 +3754,11 @@ - The flux of cosmic ray muons per cm2 at the surface of the Earth is approximately 1.0. - The quotient of dN by dt, where dN is the increment of the particle number in the time interval dt. The unit for flux is reciprocal second (s^[-1].) - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - flux + The flux of cosmic ray muons per cm2 at the surface of the Earth is approximately 1.0. + The quotient of dN by dt, where dN is the increment of the particle number in the time interval dt. The unit for flux is reciprocal second (s^[-1].) + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + flux @@ -3768,10 +3768,10 @@ - An atomic nucleus, fully stripped of its orbital electrons, containing 2 or more protons. Nuclei containing between 2 protons (helium) and 6 protons (carbon) are sometimes referred to as light ions. - Jack Miller - In RBO--needs def from NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - heavy ion + An atomic nucleus, fully stripped of its orbital electrons, containing 2 or more protons. Nuclei containing between 2 protons (helium) and 6 protons (carbon) are sometimes referred to as light ions. + Jack Miller + In RBO--needs def from NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + heavy ion @@ -3780,13 +3780,13 @@ - Biological effects are a function of LET. - The energy deposited by an ionizing charged particle or photon in any medium per unit path length. - Jack Miller - LET - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - LET - linear energy transfer + Biological effects are a function of LET. + The energy deposited by an ionizing charged particle or photon in any medium per unit path length. + Jack Miller + LET + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + LET + linear energy transfer @@ -3795,11 +3795,11 @@ - Radiation protection standards take into account organ dose as well as whole body dose. - The mean absorbed radiation dose in a specified tissue or organ of the human body. - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - organ dose + Radiation protection standards take into account organ dose as well as whole body dose. + The mean absorbed radiation dose in a specified tissue or organ of the human body. + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + organ dose @@ -3808,11 +3808,11 @@ - Neutrons have a high quality factor compared to photons. - Dimensionless factor developed for purposes of radiation protection and assessing health risks in general terms that accounts for the relative biological effectiveness of different radiations in producing stochastic effects and is used to relate absorbed - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - quality factor + Neutrons have a high quality factor compared to photons. + Dimensionless factor developed for purposes of radiation protection and assessing health risks in general terms that accounts for the relative biological effectiveness of different radiations in producing stochastic effects and is used to relate absorbed + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + quality factor @@ -3821,11 +3821,11 @@ - The samples received a dose of 1 Gy. (The use of the gray unit implies that "dose" refers to a measured quantity, typically absorbed dose or organ dose.) - The samples received a dose of 1 Sv. (The use of the sievert unit implies that "dose" refers to a der - A measurement datum of the quantity of radiation absorbed by a substance or organism. The term "radiation dose" may for example refer to absorbed dose, organ dose, dose equivalent or equivalent dose, depending upon context and weighting factor(s). - Jack Miller - radiation dose + The samples received a dose of 1 Gy. (The use of the gray unit implies that "dose" refers to a measured quantity, typically absorbed dose or organ dose.) + The samples received a dose of 1 Sv. (The use of the sievert unit implies that "dose" refers to a der + A measurement datum of the quantity of radiation absorbed by a substance or organism. The term "radiation dose" may for example refer to absorbed dose, organ dose, dose equivalent or equivalent dose, depending upon context and weighting factor(s). + Jack Miller + radiation dose @@ -3834,12 +3834,12 @@ - Radiation quality is often expressed in terms of the linear energy transfer of the ionising particles that deliver the absorbed dose. Rossi, Harald H. Specification of Radiation Quality. Radiation Research, vol. 10, no. 5, Radiation Research Society, 1959, pp. 522 31, https://doi.org/10.2307/3570787. But this is an over simplification. - Is a quality of radiation that reflects the fluence spectrum of charged and neutral particles within the material or medium where dose is being deposited. - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) and see https://melodi-online.eu/wp-content/uploads/2021/04/02-What-is-radiation-quality-Goodhead.pdf - radiation quality - TRUE + Radiation quality is often expressed in terms of the linear energy transfer of the ionising particles that deliver the absorbed dose. Rossi, Harald H. Specification of Radiation Quality. Radiation Research, vol. 10, no. 5, Radiation Research Society, 1959, pp. 522 31, https://doi.org/10.2307/3570787. But this is an over simplification. + Is a quality of radiation that reflects the fluence spectrum of charged and neutral particles within the material or medium where dose is being deposited. + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) and see https://melodi-online.eu/wp-content/uploads/2021/04/02-What-is-radiation-quality-Goodhead.pdf + radiation quality + TRUE @@ -3848,11 +3848,11 @@ - Radiation weighting factors may change as more data on biological effects are obtained. - A factor used to allow for differences in the biological effectiveness between different radiations when calculating equivalent dose (H_T) (see equivalent dose). These factors are independent of the tissue or organ irradiated. - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - radiation weighting factor + Radiation weighting factors may change as more data on biological effects are obtained. + A factor used to allow for differences in the biological effectiveness between different radiations when calculating equivalent dose (H_T) (see equivalent dose). These factors are independent of the tissue or organ irradiated. + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + radiation weighting factor @@ -3861,13 +3861,13 @@ - Neutrons have been found to have a higher RBE than electrons. - Factor used to compare the biological effectiveness of absorbed doses from different types of ionizing radiation, determined experimentally. RBE is the ratio of the absorbed dose of a reference radiation to the absorbed dose of the radiation in question r - Jack Miller - RBE - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - RBE - relative biological effectiveness + Neutrons have been found to have a higher RBE than electrons. + Factor used to compare the biological effectiveness of absorbed doses from different types of ionizing radiation, determined experimentally. RBE is the ratio of the absorbed dose of a reference radiation to the absorbed dose of the radiation in question r + Jack Miller + RBE + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + RBE + relative biological effectiveness @@ -3876,11 +3876,11 @@ - Tissue equivalent materials can be used to study radiation effects at depth in the human body. - Denotes a substance with absorbing and scattering properties for a given radiation that sufficiently match those of a particular biological tissue. - Jack Miller - NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) - tissue equivalence + Tissue equivalent materials can be used to study radiation effects at depth in the human body. + Denotes a substance with absorbing and scattering properties for a given radiation that sufficiently match those of a particular biological tissue. + Jack Miller + NCRP Glossary (https://ncrponline.org/wp-content/themes/ncrp/PDFs/NCRP-Composite-Glossary.pdf) + tissue equivalence @@ -3918,5 +3918,5 @@ - + From bb8ccf8e27c45e6291bce264a6617bc63e551e82 Mon Sep 17 00:00:00 2001 From: DanBerrios Date: Fri, 26 Apr 2024 20:18:24 +0000 Subject: [PATCH 3/5] Add addl planned prcoess ID --- rbo-base.owl | 8 +------- rbo-full.owl | 2 +- rbo.owl | 2 +- src/ontology/components/all_templates.owl | 8 +------- src/templates/RBO_classes.owl | 8 +------- src/templates/RBO_classes.tsv | 2 +- 6 files changed, 6 insertions(+), 24 deletions(-) diff --git a/rbo-base.owl b/rbo-base.owl index a0ea748..0f04058 100644 --- a/rbo-base.owl +++ b/rbo-base.owl @@ -410,12 +410,6 @@ - - - - - - @@ -1860,7 +1854,7 @@ - + Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally. 0000-0002-5111-7263 diff --git a/rbo-full.owl b/rbo-full.owl index ed0e3fb..272299d 100644 --- a/rbo-full.owl +++ b/rbo-full.owl @@ -278249,7 +278249,7 @@ Classes for population already exist in IDO ('organism population', I - + Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally. 0000-0002-5111-7263 diff --git a/rbo.owl b/rbo.owl index 3168d24..8c683aa 100644 --- a/rbo.owl +++ b/rbo.owl @@ -278237,7 +278237,7 @@ Classes for population already exist in IDO ('organism population', I - + Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally. 0000-0002-5111-7263 diff --git a/src/ontology/components/all_templates.owl b/src/ontology/components/all_templates.owl index f50a604..e9ae70f 100644 --- a/src/ontology/components/all_templates.owl +++ b/src/ontology/components/all_templates.owl @@ -174,12 +174,6 @@ - - - - - - @@ -1562,7 +1556,7 @@ - + Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally. 0000-0002-5111-7263 diff --git a/src/templates/RBO_classes.owl b/src/templates/RBO_classes.owl index 513d2aa..77894af 100644 --- a/src/templates/RBO_classes.owl +++ b/src/templates/RBO_classes.owl @@ -142,12 +142,6 @@ - - - - - - @@ -1374,7 +1368,7 @@ - + Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally. 0000-0002-5111-7263 diff --git a/src/templates/RBO_classes.tsv b/src/templates/RBO_classes.tsv index 5024467..c1c6d03 100644 --- a/src/templates/RBO_classes.tsv +++ b/src/templates/RBO_classes.tsv @@ -166,7 +166,7 @@ obo:RBO_00005074 non-targeted effects of ionising radiation non-targeted effects obo:RBO_00002000 radiation exposure Irradiation The process by which an entity is exposed to electromagnetic or acoustic radiation radiation energy internally or externally. 0000-0002-5111-7263 energy transfer process obo:RBO_00002001 accidental radiation exposure Accidental irradiation Unplanned exposure to radiation of any type in any environment or otherwise planned process. 0000-0002-5111-7263 radiation exposure obo:RBO_00002007 anthropogenic radiation exposure Exposure to human generated radiation "Exposure to ionising radiation created by a man-made machine or exposure to a fixed source. For example a cobalt source, an X ray machine, an acceleratororf a nucler weapon." 0000-0002-5111-7263 radiation exposure -obo:RBO_00002002 planned radiation exposure Planned irradiation "Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally." 0000-0002-5111-7263 anthropogenic radiation exposure|planned process +obo:RBO_00002002 planned radiation exposure Planned irradiation "Planned exposure of an entity to radiation of any type, for example as part of a medical or experimental procedure with the intention of exposing the entity to radiation energy internally or externally." 0000-0002-5111-7263 anthropogenic radiation exposure|OBI:0000011 obo:RBO_00002003 medical diagnostic radiation exposure Diagnostic irradiation "Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a diagnosis of disease." 0000-0002-5111-7263 planned anthropogenic radiation exposure obo:RBO_00002004 exposure to naturally ocurring radioactive material Environmental irradiation Exposure to naturally occurring radiation (NORM) of any type in any environment . 0000-0002-5111-7263 radiation exposure obo:RBO_00002005 medical therapeutic radiation exposure Therapeutic irradiation "Planned exposure of an organism to radiation of any type, internally or externally, with the intention to effect a cure or mitigation of disease." 0000-0002-5111-7263 planned anthropogenic radiation exposure From 7e14d28ed84ba3fa32aac5ce5d684c4033bd42e2 Mon Sep 17 00:00:00 2001 From: DanBerrios Date: Mon, 29 Apr 2024 22:27:08 +0000 Subject: [PATCH 4/5] Turn on mirroring --- src/ontology/Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/ontology/Makefile b/src/ontology/Makefile index 212ee5f..08e86b1 100644 --- a/src/ontology/Makefile +++ b/src/ontology/Makefile @@ -339,7 +339,7 @@ $(COMPONENTSDIR)/%: | $(COMPONENTSDIR) # ---------------------------------------- IMP=true # Global parameter to bypass import generation -MIR=false # Global parameter to bypass mirror generation +MIR=true# Global parameter to bypass mirror generation IMP_LARGE=false # Global parameter to bypass handling of large imports From 9fab02fea4cd252795038a87b4a4f432263f26fe Mon Sep 17 00:00:00 2001 From: DanBerrios Date: Mon, 29 Apr 2024 22:55:57 +0000 Subject: [PATCH 5/5] Turn on large mirroring --- src/ontology/Makefile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/ontology/Makefile b/src/ontology/Makefile index 08e86b1..1abe970 100644 --- a/src/ontology/Makefile +++ b/src/ontology/Makefile @@ -339,8 +339,8 @@ $(COMPONENTSDIR)/%: | $(COMPONENTSDIR) # ---------------------------------------- IMP=true # Global parameter to bypass import generation -MIR=true# Global parameter to bypass mirror generation -IMP_LARGE=false # Global parameter to bypass handling of large imports +MIR=true # Global parameter to bypass mirror generation +IMP_LARGE=true # Global parameter to bypass handling of large imports