Code

September 2024 update#1004

Code

Merged

lizihao-anu merged 117 commits intomasterPublic-Health-Scotland/source-linkage-files:masterfrom september-2024Public-Health-Scotland/source-linkage-files:september-2024Copy head branch name to clipboardSep 17, 2024

+2,577-618

Commits

Commits on Mar 26, 2024

• update documentation

  

  Jennit07

  authored and

  lizihao-anu

  committed
  b829eab

• Update sc connection name

  

  Jennit07

  authored and

  lizihao-anu

  committed
  99f9c2d

• Update documentation

  

  Jennit07

  authored and

  lizihao-anu

  committed
  298e613

Commits on Apr 8, 2024

• 936 - Update parameters with file paths (#939)

  Show description for fe189a9
  Jennit07

  authored
  fe189a9

Commits on Apr 15, 2024

• Merge branch 'master' into June-24-update

  lizihao-anu

  committed
  6fe98c8

• remove and merge overlapping records in GP OoHs

  lizihao-anu

  committed
  f03c5c6

• Style code

  lizihao-anu

  committed
  fda0c51

• update spelling to lowercases

  lizihao-anu

  committed
  713e7a7

• update spelling

  lizihao-anu

  committed
  a0ac030

Commits on Apr 17, 2024

• Create tests for social care sandpit extracts (#943)

  Show description for 2cff80d
  

  Jennit07

  and

  lizihao-anu

  authored
  2cff80d

Commits on Apr 30, 2024

• only select columns we want in ltc raw data

  lizihao-anu

  committed
  6baad29

• [check-spelling] Update metadata

  Show description for 211c8a7
  

  lizihao-anu

  authored and

  check-spelling-bot

  committed
  211c8a7

Commits on May 3, 2024

• for some reason the latest scid code was overwritten after the march update?? anyway, now it is fixed.

  

  marjom02

  committed
  86efa00

• only select columns we want in ltc raw data (#947)

  Show description for 08d0066
  SwiftySalmon

  authored
  08d0066

• Style code

  

  SwiftySalmon

  authored and

  github-actions[bot]

  committed
  d571cb6

• latest social care ID update (#948)

  Show description for fa5cdcd
  rchlv

  authored
  fa5cdcd

Commits on May 7, 2024

• Merge May24 NI update into June update branch (#949)

  Show description for a75374e
  Jennit07

  authored
  a75374e

Commits on May 13, 2024

• Update NEWS.md

  Jennit07

  authored
  08b9f80

Commits on May 17, 2024

• link GP-OoH with CUP markers

  lizihao-anu

  committed
  7f569d3

• Style code

  

  lizihao-anu

  authored and

  github-actions[bot]

  committed
  20cdf4d

Commits on May 23, 2024

• update gp ooh cup

  lizihao-anu

  committed
  3869b09

• link cup to acute

  lizihao-anu

  committed
  a967d5c

• Update documentation

  

  lizihao-anu

  authored and

  github-actions[bot]

  committed
  a989b3f

Commits on Jun 24, 2024

• adding the death dates to activity after death cases (#972)

  Show description for ce90a45
  

  SwiftySalmon

  and

  marjom02

  authored
  ce90a45

• Add sys time to functions (#971)

  Show description for 4e761ec
  

  3 peopleauthored
  4e761ec

Commits on Jun 25, 2024

• Update slf deaths lookup function name

  Jennit07

  committed
  5beee76

Commits on Jun 26, 2024

• automate combined deaths lookup

  Jennit07

  committed
  33278ef

• Merge branch 'combined_deaths' into targets_deaths

  Jennit07

  committed
  59235a3

Commits on Jun 28, 2024

• Automate the combined slf deaths lookup (#973)

  Show description for a7f983a
  SwiftySalmon

  authored
  a7f983a

Commits on Jul 2, 2024

• Merge branch 'september-2024' into gpooh_cup

  Jennit07

  committed
  1d2562d

• Update documentation

  

  Jennit07

  authored and

  github-actions[bot]

  committed
  16f5852

• Update targets script

  Jennit07

  committed
  dbb118a

• Update years

  Jennit07

  committed
  623b222

• Update running process manually

  Jennit07

  committed
  d319c85

Commits on Jul 3, 2024

• re-arrange brackets

  Jennit07

  committed
  ca2d033

• Style code

  Jennit07

  committed
  f15ca4e

• Update run targets scripts

  Jennit07

  committed
  61baf02

• Set up all-targets script

  Jennit07

  committed
  379b137

• Style code

  

  Jennit07

  authored and

  github-actions[bot]

  committed
  3fb27ae

• Update documentation

  

  Jennit07

  authored and

  github-actions[bot]

  committed
  ceb526a

• Update targets script

  Jennit07

  committed
  a521206

• Update years

  Jennit07

  committed
  585db7f

• Update running process manually

  Jennit07

  committed
  dada9cb

• re-arrange brackets

  Jennit07

  committed
  bf63d73

• Style code

  Jennit07

  committed
  ba2be19

• Update run targets scripts

  Jennit07

  committed
  a4cf7b6

• Set up all-targets script

  Jennit07

  committed
  f840c53

• Style code

  Jennit07

  committed
  6d20852

• Merge branch 'targets_deaths' of github.com:Public-Health-Scotland/source-linkage-files into targets_deaths

  Jennit07

  committed
  1cbfb51

Commits on Jul 4, 2024

• Style code

  

  lizihao-anu

  authored and

  github-actions[bot]

  committed
  5482a75

Commits on Jul 5, 2024

• Automate the combined slf deaths lookup (#973)

  Show description for 91e5946
  

  SwiftySalmon

  authored and

  Jennit07

  committed
  91e5946

• Merge branch 'september-2024' into gpooh_cup

  Jennit07

  authored
  010d78e

• Merge branch 'september-2024' into targets_deaths

  Jennit07

  authored
  5ee009b

• Update documentation

  

  Jennit07

  authored and

  github-actions[bot]

  committed
  c3fb9d5

• Merge branch 'september-2024' into gpooh_cup

  Jennit07

  authored
  a0d796c

• Merge branch 'september-2024' into targets_deaths

  Jennit07

  authored
  fa3ee85

Commits on Jul 8, 2024

• Update Run_SLF_Files_targets/run_all_targets.R

  Show description for f30344c
  

  SwiftySalmon

  and

  lizihao-anu

  authored
  f30344c

• Style code

  

  SwiftySalmon

  authored and

  github-actions[bot]

  committed
  06813ab

• Update Targets to include combined deaths processing (#980)

  Show description for adae79b
  SwiftySalmon

  authored
  adae79b

• Merge branch 'september-2024' into gpooh_cup

  lizihao-anu

  authored
  afb356e

• remove combined_deaths_lookup from targets

  lizihao-anu

  committed
  8b4706d

• Merge branch 'september-2024' into gpooh_cup

  lizihao-anu

  authored
  f20a5f7

• Style code

  

  lizihao-anu

  authored and

  github-actions[bot]

  committed
  09076f4

• Merge branch 'september-2024' into gpooh_cup

  lizihao-anu

  authored
  c54aa04

• fix acute_cup and gp_ooh_cup paths

  lizihao-anu

  committed
  400841e

• Update documentation

  

  lizihao-anu

  authored and

  github-actions[bot]

  committed
  5879fe4

• fix typo

  lizihao-anu

  committed
  2e4b160

Commits on Jul 9, 2024

• Merge branch 'september-2024' of github.com:Public-Health-Scotland/source-linkage-files into september-2024

  

  marjom02

  committed
  8951d98

• adapt acute_cup for anon_chi

  lizihao-anu

  committed
  b56ef25

• Style code

  

  lizihao-anu

  authored and

  github-actions[bot]

  committed
  8c3873c

Commits on Jul 10, 2024

• minor changes

  lizihao-anu

  committed
  283e004

• Style code

  

  lizihao-anu

  authored and

  github-actions[bot]

  committed
  70b1850

• Update documentation

  

  lizihao-anu

  authored and

  github-actions[bot]

  committed
  a7bac73

• GPooh and acute cup (#982)

  Show description for 8d8872d
  SwiftySalmon

  authored
  8d8872d

• Merge branch 'september-2024' of github.com:Public-Health-Scotland/source-linkage-files into september-2024

  

  marjom02

  committed
  7c4ded5

Commits on Jul 19, 2024

• Person id sds (#981)

  Show description for 9dac223
  

  3 peopleauthored
  9dac223

• Update NEWS.md

  Jennit07

  authored
  419720b

Commits on Jul 23, 2024

• unify file names for cup files

  lizihao-anu

  committed
  7509d73

Commits on Jul 24, 2024

• Add client flags (#979)

  Show description for 3e06476
  

  3 peopleauthored
  3e06476

Commits on Aug 6, 2024

• Update lookup to use anon-chi

  

  Jennit07

  authored and

  lizihao-anu

  committed
  bc06622

• Remove redundant code

  Show description for 60d6eb1
  

  Jennit07

  authored and

  lizihao-anu

  committed
  60d6eb1

• Update documentation

  

  Jennit07

  authored and

  lizihao-anu

  committed
  4dd9b51

• remove weekly nrs date variable

  

  Jennit07

  authored and

  lizihao-anu

  committed
  3e07838

• Use boxi nrs date or chi death date

  

  Jennit07

  authored and

  lizihao-anu

  committed
  3e9c362

• Use get_combined_slf_deaths_path

  

  Jennit07

  authored and

  lizihao-anu

  committed
  76afd97

• add catch for NAs

  

  Jennit07

  authored and

  lizihao-anu

  committed
  7491dc8

• add notes

  

  Jennit07

  authored and

  lizihao-anu

  committed
  519b0c3

• Fix typo

  

  Jennit07

  authored and

  lizihao-anu

  committed
  f7536e8

• remove redundant code

  

  Jennit07

  authored and

  lizihao-anu

  committed
  1347c79

• Style code

  

  Jennit07

  authored and

  lizihao-anu

  committed
  214bc3b

• add a function of combine nrs and it_chi death

  lizihao-anu

  committed
  c493a80

• Update documentation

  lizihao-anu

  committed
  516cf9f

• Style code

  lizihao-anu

  committed
  f0babdb

• minor changes

  lizihao-anu

  committed
  b57c69f

• remove process_slf_deaths_lookup

  lizihao-anu

  committed
  5d78180

• Update documentation

  lizihao-anu

  committed
  03b41c3

Commits on Aug 7, 2024

• Major update of Care Home script (#945)

  Show description for d186a3d
  

  3 peopleauthored
  d186a3d

• update ch_chi_cis methodology

  Jennit07

  committed
  8f4a06a

• update ch_sc_id_cis methodology

  Jennit07

  committed
  4c8bbf3

Commits on Aug 8, 2024

• Update notes

  Jennit07

  committed
  b96feb1

Commits on Aug 12, 2024

• Merge branch 'september-2024' of github.com:Public-Health-Scotland/source-linkage-files into september-2024

  

  marjom02

  committed
  c01b7f6

• Use right_join

  Jennit07

  committed
  46a668c

• Update process_sc_all_care_home.R

  Show description for f7caaea
  SwiftySalmon

  authored
  f7caaea

• Investigate care home cis markers (#989)

  Show description for f48dfae
  SwiftySalmon

  authored
  f48dfae

• Latest scid update (#990)

  Show description for e672d4a
  SwiftySalmon

  authored
  e672d4a

Commits on Aug 16, 2024

• Add new nsu (#991)

  Show description for 439e430
  

  4 peopleauthored
  439e430

Commits on Aug 19, 2024

• update reference

  lizihao-anu

  committed
  72a66f8

Commits on Aug 20, 2024

• Reduce dependencies (#984)

  Show description for fce3249
  

  3 peopleauthored
  fce3249

Commits on Aug 21, 2024

• minor changes to social care code

  

  marjom02

  authored and

  lizihao-anu

  committed
  7146a11

• Style code

  

  SwiftySalmon

  authored and

  lizihao-anu

  committed
  5e31183

• Update process_sc_all_care_home.R

  

  SwiftySalmon

  authored and

  lizihao-anu

  committed
  962f7a3

Commits on Aug 27, 2024

• Update NEWS.md

  Jennit07

  authored
  b24399e

Commits on Sep 16, 2024

• merge Sep2024 fix into sep24 branch (#1003)

  Show description for 86424a5
  

  Jennit07

  and

  lizihao-anu

  authored
  86424a5

Commits on Sep 17, 2024

• update copy_to_hscdiip.R

  lizihao-anu

  committed
  69ce173

• Update older years to bring the data in line with our newest processes. (#988)

  Show description for 1ab7e7f
  

  4 peopleauthored
  1ab7e7f

• Update replace_sc_id_with_latest function

  Jennit07

  committed
  4e3e185

• Style code

  

  Jennit07

  authored and

  github-actions[bot]

  committed
  27ac757