DO NOT MERGE YET

[sedghi]

Migrating the Monai Label plugin for the upcoming OHIF 3.9 and Cornerstone3D 2.0 to observe the migration process and take notes.

The AutoSegmentation works, but I doubt there's much left to do for the rest of it to function properly.

[tangy5]

I can continue to work on making other part compatible to OHIF3.9. Looks like there will be bigger changes to switch 3.9 from 3.8.
Will check one by one.

Thanks again for the guide.

[sedghi]

@tangy5 Yes, it's a significant change since Cornerstone3D 2.0 was released. It won't happen very often.
https://www.cornerstonejs.org/docs/migration-guides/intro

[SachidanandAlle]

Let me work on this one time. I will take care from here. @sedghi you can help to review it once I submit the PR

[SachidanandAlle]

WIP: https://github.com/Project-MONAI/MONAILabel/tree/sachi/ohifv3

This should take care of most of the things.
So far verified

1. basic auto segmentation
2. point prompts (deepgrow/deepedit/vista3d/sam2 models)
3. class prompts (seg/vista models)

Need to add back new other things like Active Learning..

[tangy5]

WIP: https://github.com/Project-MONAI/MONAILabel/tree/sachi/ohifv3

This should take care of most of the things. So far verified

1. basic auto segmentation
2. point prompts (deepgrow/deepedit/vista3d/sam2 models)
3. class prompts (seg/vista models)

Need to add back new other things like Active Learning..

Great, after this is finished, I will add VISTA3D supports to OHIF 3.9.
Thanks again.

[sedghi]

@SachidanandAlle yes, let me know when to review

[sedghi]

@SachidanandAlle, consider merging a formatting PR first to reduce the noise from numerous formatting fixes.

[SachidanandAlle]

@SachidanandAlle, consider merging a formatting PR first to reduce the noise from numerous formatting fixes.

#1784

[SachidanandAlle]

@sedghi need your help.
https://github.com/Project-MONAI/MONAILabel/tree/sachi/ohifv3

I can run auto segmentation, point prompts (interactive for deepgrow/deepedit/sam2/vista3d) and also subset/class prompts.
But on the main list monai-label mode is not active

However for testing, I can do right click and open and run things in monailabel.
The button is disabled to open a studies in monai-label mode directly.

I might be missing some config in the init for extension/mode. need your help.

Otherwise TODO:

1. Add back active learning section
2. Add back settings table

[sedghi]

@SachidanandAlle Does your PR have my changes here? shall we close this one?

[SachidanandAlle]

Yes.. I have cherry picked the needed ones to support ohif latest. During this I might have missed something. That can be one reason for disabled button for monailabel mode

[sedghi]

Let's close this one, and I'll work on that one.

[SachidanandAlle]

Thanks :)