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DESCRIPTION
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DESCRIPTION
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Package: hidecan
Title: Create HIDECAN Plots for Visualising Genome-Wide Association Studies and Differential Expression Results
Version: 1.1.0.9000
Authors@R:
person("Olivia", "Angelin-Bonnet", , "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-7708-2919"))
Description: Generates HIDECAN plots that summarise and combine
the results of genome-wide association studies (GWAS) and transcriptomics
differential expression analyses (DE), along with manually curated candidate genes of interest. The HIDECAN plot
is presented in: Angelin-Bonnet, O., Vignes, M., Biggs, P. J., Baldwin, S., & Thomson, S. (2023). Visual
integration of GWAS and differential expression results with the hidecan R package. bioRxiv, 2023-03.
License: MIT + file LICENSE
URL: https://plantandfoodresearch.github.io/hidecan/, https://github.com/PlantandFoodResearch/hidecan
BugReports: https://github.com/PlantandFoodResearch/hidecan/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
R (>= 2.10)
Imports:
dplyr,
ggnewscale,
ggplot2,
ggrepel,
purrr,
RColorBrewer,
shiny,
tibble,
tidyr,
viridis,
vroom
Suggests:
knitr,
rmarkdown,
stringr,
testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
Language: en-GB