diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 1e763b3d..9e9668cc 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -24,7 +24,7 @@ jobs: strategy: matrix: NXF_VER: - - "22.04.3" + - "23.04.0" - "latest-everything" steps: - name: Check out pipeline code diff --git a/README.md b/README.md index da8711ce..ee85285e 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,7 @@ [![GitHub Actions CI Status](https://github.com/plant-food-research-open/assemblyqc/workflows/nf-core%20CI/badge.svg)](https://github.com/plant-food-research-open/assemblyqc/actions?query=workflow%3A%22nf-core+CI%22) [![GitHub Actions Linting Status](https://github.com/plant-food-research-open/assemblyqc/workflows/nf-core%20linting/badge.svg)](https://github.com/plant-food-research-open/assemblyqc/actions?query=workflow%3A%22nf-core+linting%22)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.10647870-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.10647870) -[![Nextflow](https://img.shields.io/badge/nextflow%20DSL2-%E2%89%A522.04.3-23aa62.svg)](https://www.nextflow.io/) +[![Nextflow](https://img.shields.io/badge/nextflow%20DSL2-%E2%89%A523.04.0-23aa62.svg)](https://www.nextflow.io/) [![run with conda](http://img.shields.io/badge/run%20with-conda-3EB049?labelColor=000000&logo=anaconda)](https://docs.conda.io/en/latest/) [![run with docker](https://img.shields.io/badge/run%20with-docker-0db7ed?labelColor=000000&logo=docker)](https://www.docker.com/) [![run with singularity](https://img.shields.io/badge/run%20with-singularity-1d355c.svg?labelColor=000000)](https://sylabs.io/docs/) diff --git a/nextflow.config b/nextflow.config index 1af86d10..ec565e3c 100644 --- a/nextflow.config +++ b/nextflow.config @@ -260,7 +260,7 @@ manifest { homePage = 'https://github.com/plant-food-research-open/assemblyqc' description = """A NextFlow pipeline which evaluates assembly quality with well-established tools and presents the results in a unified html report.""" mainScript = 'main.nf' - nextflowVersion = '!>=22.04.3' + nextflowVersion = '!>=23.04.0' version = '1.4dev' doi = '10.5281/zenodo.10647870' }