DESCRIPTION

Package: FragPipeAnalystR
Type: Package
Title: FragPipe downstream analysis in R
Version: 1.0.0
Author: Yi Hsiao
Maintainer: Yi Hsiao <yihsiao@umich.edu>
Description: More about what it does (maybe more than one line)
    Use four spaces when indenting paragraphs within the Description.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Depends: 
    R (>= 4.1)
Imports: 
    assertthat,
    cmapR,
    ComplexHeatmap,
    ConsensusClusterPlus,
    dplyr,
    fdrtool,
    ggplot2,
    ggrepel,
    grDevices,
    grid,
    httr,
    limma,
    magrittr,
    matrixStats,
    MSnbase,
    norm,
    plotly,
    purrr,
    RColorBrewer,
    readr,
    S4Vectors,
    SNFtool,
    stringr,
    SummarizedExperiment,
    tibble,
    tidyr,
    vsn,
    clusterProfiler,
    msigdbr
Suggests:
    devtools,
    ensembldb,
    knitr,
    lintr,
    org.Hs.eg.db,
    rcmdcheck,
    rmarkdown,
    styler,
    testthat (>= 3.0.0)
biocViews: Software
Config/testthat/edition: 3
RoxygenNote: 7.3.1
VignetteBuilder: knitr