From e2dfe9345c9900b2c60584c97d8441ab43074baf Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 27 Jan 2023 13:19:44 -0500
Subject: [PATCH 01/45] an update to handle uint16 data

---
 dataset/create_dataset.py | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/dataset/create_dataset.py b/dataset/create_dataset.py
index d49b8e98..60f05f41 100644
--- a/dataset/create_dataset.py
+++ b/dataset/create_dataset.py
@@ -179,6 +179,11 @@ def _get_tensor(self, query):
             out_shape=out_shape, window=from_bounds(*bounds, self.dr_ds.transform)
         )
 
+        if dest.dtype == np.uint16:
+            dest = dest.astype(np.int32)
+        elif dest.dtype == np.uint32:
+            dest = dest.astype(np.int64)
+
         tensor = torch.tensor(dest)
 
         return tensor
@@ -285,7 +290,7 @@ def __getitem__(self, query: BoundingBox) -> Dict[str, Any]:
         ogr.Layer.Clip(self.mem_vec_ds.GetLayer(), mem_layer, out_layer)
 
         # Check that there is no curve geometry in the output patch:
-        self._check_curve(layer=out_layer)
+        # self._check_curve(layer=out_layer)
 
         sample = {"mask": out_mem_ds, "crs": self.crs, "bbox": query}
 

From 217646908553a69c41a291830455eecb0ca4f661 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 27 Jan 2023 13:44:25 -0500
Subject: [PATCH 02/45] a fix for handling the OGR geometry type
 "GEOMETRYCOLLECTION"

---
 dataset/create_dataset.py | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/dataset/create_dataset.py b/dataset/create_dataset.py
index 60f05f41..63852714 100644
--- a/dataset/create_dataset.py
+++ b/dataset/create_dataset.py
@@ -240,10 +240,10 @@ def _check_curve(layer: ogr.Layer) -> None:
         feature = layer.GetNextFeature()
         while feature is not None:
             geom = feature.GetGeometryRef()
-            name = geom.GetGeometryName()
+            name_wkt = geom.ExportToWkt()
 
             # Approximate a curvature by a polygon geometry:
-            if name != "POLYGON" and name != "MULTIPOLYGON":
+            if 'curv' in name_wkt.lower():
                 linear_geom = geom.GetLinearGeometry()
                 new_feature = ogr.Feature(feature_defn)
                 new_feature.SetGeometryDirectly(linear_geom)
@@ -290,7 +290,7 @@ def __getitem__(self, query: BoundingBox) -> Dict[str, Any]:
         ogr.Layer.Clip(self.mem_vec_ds.GetLayer(), mem_layer, out_layer)
 
         # Check that there is no curve geometry in the output patch:
-        # self._check_curve(layer=out_layer)
+        self._check_curve(layer=out_layer)
 
         sample = {"mask": out_mem_ds, "crs": self.crs, "bbox": query}
 

From 5ccdf460c98eba532f533c7fc5842802bfb61271 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 2 Jun 2023 10:04:44 -0400
Subject: [PATCH 03/45] added to gha.yml: conda config --set channel_priority
 strict

---
 .github/workflows/github-actions-ci.yml | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 1fa8c373..f9670441 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -20,6 +20,9 @@ jobs:
         run: |
           # $CONDA is an environment variable pointing to the root of the miniconda directory
           echo $CONDA/bin >> $GITHUB_PATH
+      - name: Set Conda Priority
+        run: |
+          conda config --set channel_priority strict
       - name: Install dependencies
         run: |
           conda env create --file environment.yml

From bab5e078c785c89a4fd12f3ad93f6e41492c0180 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 2 Jun 2023 10:27:49 -0400
Subject: [PATCH 04/45] removed to gha.yml: conda config --set channel_priority
 strict

---
 .github/workflows/github-actions-ci.yml | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index f9670441..1fa8c373 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -20,9 +20,6 @@ jobs:
         run: |
           # $CONDA is an environment variable pointing to the root of the miniconda directory
           echo $CONDA/bin >> $GITHUB_PATH
-      - name: Set Conda Priority
-        run: |
-          conda config --set channel_priority strict
       - name: Install dependencies
         run: |
           conda env create --file environment.yml

From 292070dda9be7b7f7c701d487fd66612b76a710c Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Thu, 15 Jun 2023 09:55:54 -0400
Subject: [PATCH 05/45] removed commented rows

---
 .github/workflows/github-actions-ci.yml | 10 +++---
 environment.yml                         | 44 +++++++++----------------
 inference_segmentation.py               |  8 ++---
 tiling_segmentation.py                  |  2 +-
 4 files changed, 23 insertions(+), 41 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 24f4bca0..1fa8c373 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -12,16 +12,14 @@ jobs:
         uses: actions/setup-python@v2
         with:
           python-version: 3.9
+      - name: Replace pytorch requirement with pytorch-cpu to speed up CI
+        run: |
+          sed -i -e 's/pytorch..*$/pytorch-cpu/g' environment.yml
+          sed -i -e 's/torchvision..*$/torchvision-cpu/g' environment.yml
       - name: Add conda to system path
         run: |
           # $CONDA is an environment variable pointing to the root of the miniconda directory
           echo $CONDA/bin >> $GITHUB_PATH
-      - name: Update Conda
-        run: |
-          conda update -n base -c defaults conda
-      - name: Set Conda Priority
-        run: |
-          conda config --set channel_priority strict
       - name: Install dependencies
         run: |
           conda env create --file environment.yml
diff --git a/environment.yml b/environment.yml
index d55bd909..48e434fc 100644
--- a/environment.yml
+++ b/environment.yml
@@ -3,38 +3,24 @@ channels:
   - pytorch
   - conda-forge
 dependencies:
-  - python>=3.10
-  - pip>=23.1
+  - coverage>=6.3.1
+  - docker-py>=4.4.4
+  - geopandas>=0.10.2
   - hydra-core>=1.2.0
-  - coverage>=6.5.0
-  - geopandas>=0.12.1
-  - rasterio>=1.3.3
-  - ruamel_yaml>=0.15.80
-  - pytorch==1.12.1
-  - torchvision==0.13.1
+  - pip
+  - pynvml>=11.0
+  - pystac>=0.3.0
+  - pytest>=7.1
+  - python>=3.10
+  - pytorch==1.12
+  - rich>=11.1
+  - ruamel_yaml>=0.15
+  - scikit-image>=0.18
+  - torchgeo>=0.3
+  - torchvision>=0.12
   - pip:
-    - pytorch-lightning>=1.7.7
-    - segmentation-models-pytorch==0.3.0
     - hydra-colorlog>=1.1.0
     - hydra-optuna-sweeper>=1.1.0
     - git+https://github.com/CosmiQ/solaris.git@0.5.0
     - ttach>=0.0.3
-    - mlflow>=2.0.1
-    - pytest>=7.2.0
-    - torchgeo==0.3.1
-    - numpy>=1.23.5
-    - shapely>=1.8.5
-    - pystac>=1.6.1
-    - omegaconf>=2.2.3
-    - rich>=12.6.0
-    - requests>=2.22.0
-    - pandas>=1.5.2
-    - affine>=2.3.1
-    - tqdm>=4.64.1
-    - pyproj>=3.4.0
-    - fiona>=1.8.22
-    - scipy>=1.9.3
-    - scikit-image>=0.19.3
-    - pillow>=9.2.0
-    - kornia>=0.6.8
-    - scikit-learn>=1.1.3
\ No newline at end of file
+    - mlflow>=1.2 # causes env solving to hang if not with pip
diff --git a/inference_segmentation.py b/inference_segmentation.py
index e7b3a746..55153d5a 100644
--- a/inference_segmentation.py
+++ b/inference_segmentation.py
@@ -171,10 +171,8 @@ def segmentation(param,
     fp = np.memmap(tp_mem, dtype='float16', mode='w+', shape=(tf_len, h_padded, w_padded, num_classes))
     img_gen = gen_img_samples(src=input_image, patch_list=patch_list, chunk_size=chunk_size)
     single_class_mode = False if num_classes > 1 else True
-    for sub_image, h_idxs, w_idxs, hann_win in tqdm(
-        img_gen, position=0, leave=True, desc='Inferring on patches',
-        total=len(patch_list)
-    ):
+    for sub_image, h_idxs, w_idxs, hann_win in tqdm(img_gen, position=0, leave=True,
+                    desc=f'Inferring on patches'):
         hann_win = np.expand_dims(hann_win, -1)
         image_metadata = add_metadata_from_raster_to_sample(sat_img_arr=sub_image,
                                                             raster_handle=input_image,
@@ -287,7 +285,7 @@ def override_model_params_from_checkpoint(
 
     if model_ckpt != params.model or classes_ckpt != classes or bands_ckpt != bands \
             or clip_limit != clip_limit_ckpt:
-        logging.info("\nParameters from checkpoint will override inputted parameters."
+        logging.info(f"\nParameters from checkpoint will override inputted parameters."
                      f"\n\t\t\t Inputted | Overriden"
                      f"\nModel:\t\t {params.model} | {model_ckpt}"
                      f"\nInput bands:\t\t{bands} | {bands_ckpt}"
diff --git a/tiling_segmentation.py b/tiling_segmentation.py
index 2d1ef7fe..76df5d05 100644
--- a/tiling_segmentation.py
+++ b/tiling_segmentation.py
@@ -741,7 +741,7 @@ def main(cfg: DictConfig) -> None:
     # TODO: use mp.Manager() to modify aoi.tiling_pairs_list from within tiling_per_aoi
     tiler.src_aoi_list = []
     for tiled_aoi, rs_tiler_paths, vec_tiler_paths in tqdm(
-            tilers, desc="Updating AOIs' information about their patches paths"):
+            tilers, desc=f"Updating AOIs' information about their patches paths"):
         tiled_aoi.patches_pairs_list = [(rs_ptch, gt_ptch) for rs_ptch, gt_ptch in zip(rs_tiler_paths, vec_tiler_paths)]
         tiler.src_aoi_list.append(tiled_aoi)
 

From e5be7343295fcb5df5084091b1d098158c274a10 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Thu, 15 Jun 2023 10:01:35 -0400
Subject: [PATCH 06/45] fix gh actions

---
 .github/workflows/github-actions-ci.yml | 10 +++---
 environment.yml                         | 44 ++++++++++++++++---------
 2 files changed, 35 insertions(+), 19 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 1fa8c373..24f4bca0 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -12,14 +12,16 @@ jobs:
         uses: actions/setup-python@v2
         with:
           python-version: 3.9
-      - name: Replace pytorch requirement with pytorch-cpu to speed up CI
-        run: |
-          sed -i -e 's/pytorch..*$/pytorch-cpu/g' environment.yml
-          sed -i -e 's/torchvision..*$/torchvision-cpu/g' environment.yml
       - name: Add conda to system path
         run: |
           # $CONDA is an environment variable pointing to the root of the miniconda directory
           echo $CONDA/bin >> $GITHUB_PATH
+      - name: Update Conda
+        run: |
+          conda update -n base -c defaults conda
+      - name: Set Conda Priority
+        run: |
+          conda config --set channel_priority strict
       - name: Install dependencies
         run: |
           conda env create --file environment.yml
diff --git a/environment.yml b/environment.yml
index 48e434fc..815e4bbf 100644
--- a/environment.yml
+++ b/environment.yml
@@ -3,24 +3,38 @@ channels:
   - pytorch
   - conda-forge
 dependencies:
-  - coverage>=6.3.1
-  - docker-py>=4.4.4
-  - geopandas>=0.10.2
-  - hydra-core>=1.2.0
-  - pip
-  - pynvml>=11.0
-  - pystac>=0.3.0
-  - pytest>=7.1
   - python>=3.10
-  - pytorch==1.12
-  - rich>=11.1
-  - ruamel_yaml>=0.15
-  - scikit-image>=0.18
-  - torchgeo>=0.3
-  - torchvision>=0.12
+  - pip>=23.1
+  - hydra-core>=1.2.0
+  - coverage>=6.5.0
+  - geopandas>=0.12.1
+  - rasterio>=1.3.3
+  - ruamel_yaml>=0.15.80
+  - pytorch==1.12.1
+  - torchvision==0.13.1
   - pip:
+    - pytorch-lightning>=1.7.7
+    - segmentation-models-pytorch==0.3.0
     - hydra-colorlog>=1.1.0
     - hydra-optuna-sweeper>=1.1.0
     - git+https://github.com/CosmiQ/solaris.git@0.5.0
     - ttach>=0.0.3
-    - mlflow>=1.2 # causes env solving to hang if not with pip
+    - mlflow>=2.0.1
+    - pytest>=7.2.0
+    - torchgeo==0.3.1
+    - numpy>=1.23.5
+    - shapely>=1.8.5
+    - pystac>=1.6.1
+    - omegaconf>=2.2.3
+    - rich>=12.6.0
+    - requests>=2.22.0
+    - pandas>=1.5.2
+    - affine>=2.3.1
+    - tqdm>=4.64.1
+    - pyproj>=3.4.0
+    - fiona>=1.8.22
+    - scipy>=1.9.3
+    - scikit-image>=0.19.3
+    - pillow>=9.2.0
+    - kornia>=0.6.8
+    - scikit-learn>=1.1.3

From 9f828f4f49e7191d34e8325f8f4833a007d53982 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Tue, 4 Jul 2023 15:27:05 -0400
Subject: [PATCH 07/45] fix for github CI

---
 environment.yml           | 2 +-
 inference_segmentation.py | 6 ++++--
 tiling_segmentation.py    | 2 +-
 3 files changed, 6 insertions(+), 4 deletions(-)

diff --git a/environment.yml b/environment.yml
index 815e4bbf..d55bd909 100644
--- a/environment.yml
+++ b/environment.yml
@@ -37,4 +37,4 @@ dependencies:
     - scikit-image>=0.19.3
     - pillow>=9.2.0
     - kornia>=0.6.8
-    - scikit-learn>=1.1.3
+    - scikit-learn>=1.1.3
\ No newline at end of file
diff --git a/inference_segmentation.py b/inference_segmentation.py
index 55153d5a..4ffcaa10 100644
--- a/inference_segmentation.py
+++ b/inference_segmentation.py
@@ -171,8 +171,10 @@ def segmentation(param,
     fp = np.memmap(tp_mem, dtype='float16', mode='w+', shape=(tf_len, h_padded, w_padded, num_classes))
     img_gen = gen_img_samples(src=input_image, patch_list=patch_list, chunk_size=chunk_size)
     single_class_mode = False if num_classes > 1 else True
-    for sub_image, h_idxs, w_idxs, hann_win in tqdm(img_gen, position=0, leave=True,
-                    desc=f'Inferring on patches'):
+    for sub_image, h_idxs, w_idxs, hann_win in tqdm(
+        img_gen, position=0, leave=True, desc='Inferring on patches',
+        total=len(patch_list)
+    ):
         hann_win = np.expand_dims(hann_win, -1)
         image_metadata = add_metadata_from_raster_to_sample(sat_img_arr=sub_image,
                                                             raster_handle=input_image,
diff --git a/tiling_segmentation.py b/tiling_segmentation.py
index 76df5d05..2d1ef7fe 100644
--- a/tiling_segmentation.py
+++ b/tiling_segmentation.py
@@ -741,7 +741,7 @@ def main(cfg: DictConfig) -> None:
     # TODO: use mp.Manager() to modify aoi.tiling_pairs_list from within tiling_per_aoi
     tiler.src_aoi_list = []
     for tiled_aoi, rs_tiler_paths, vec_tiler_paths in tqdm(
-            tilers, desc=f"Updating AOIs' information about their patches paths"):
+            tilers, desc="Updating AOIs' information about their patches paths"):
         tiled_aoi.patches_pairs_list = [(rs_ptch, gt_ptch) for rs_ptch, gt_ptch in zip(rs_tiler_paths, vec_tiler_paths)]
         tiler.src_aoi_list.append(tiled_aoi)
 

From 4a0cfe14405dbd8b092ae8e97189fbd7b085b39c Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 11:31:50 -0400
Subject: [PATCH 08/45] switching the default library path from the OS's to the
 Conda packages'

---
 Dockerfile | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/Dockerfile b/Dockerfile
index 769124f3..02daa4ad 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -27,6 +27,8 @@ RUN wget https://github.com/conda-forge/miniforge/releases/latest/download/Mamba
     apt-get clean && \
     rm -rf /var/lib/apt/lists/*
 
+ENV LD_LIBRARY_PATH $CONDA_DIR/lib:$LD_LIBRARY_PATH
+
 # Create the user
 RUN useradd --create-home -s /bin/bash --no-user-group -u $USERID $USERNAME && \
     chown $USERNAME $CONDA_DIR -R && \

From 4f847a142fdadba9e8e73814e7df1d6b1d182645 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 11:35:08 -0400
Subject: [PATCH 09/45] switching the default library path from the OS's to the
 Conda packages'

---
 inference_segmentation.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/inference_segmentation.py b/inference_segmentation.py
index 4ffcaa10..e7b3a746 100644
--- a/inference_segmentation.py
+++ b/inference_segmentation.py
@@ -287,7 +287,7 @@ def override_model_params_from_checkpoint(
 
     if model_ckpt != params.model or classes_ckpt != classes or bands_ckpt != bands \
             or clip_limit != clip_limit_ckpt:
-        logging.info(f"\nParameters from checkpoint will override inputted parameters."
+        logging.info("\nParameters from checkpoint will override inputted parameters."
                      f"\n\t\t\t Inputted | Overriden"
                      f"\nModel:\t\t {params.model} | {model_ckpt}"
                      f"\nInput bands:\t\t{bands} | {bands_ckpt}"

From f008127286aae685f582079f5b4e36b67e21d46b Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 13:14:18 -0400
Subject: [PATCH 10/45] changed the docker image for the tests

---
 .github/workflows/github-actions-ci.yml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 8eff2e0c..8e1eae1f 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -3,10 +3,9 @@ on: [push, pull_request]
 jobs:
   unit-tests:
     runs-on: ubuntu-latest
-
     # runs within your Docker container
     container:
-      image: docker://geobaserepo/gdl-cuda11:latest
+      image: docker://geobaserepo/gdl-cuda11:v2.8.1
       options: --user root
     # checkout your code from your repository
     # and runs pytest in your pipenv environment

From 333eb3317d806d656901e4c54f92cd2020a1a66b Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 13:55:50 -0400
Subject: [PATCH 11/45] clean space before image pulling

---
 .github/workflows/github-actions-ci.yml | 20 ++++++++++++++++++++
 1 file changed, 20 insertions(+)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 8e1eae1f..396f8955 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -1,6 +1,26 @@
 name: GitHub Actions Unit Tests
 on: [push, pull_request]
 jobs:
+  free-disk-space:
+    runs-on: ubuntu-latest
+    steps:
+
+      - name: Free Disk Space (Ubuntu)
+        uses: jlumbroso/free-disk-space@main
+        with:
+          # this might remove tools that are actually needed,
+          # if set to "true" but frees about 6 GB
+          tool-cache: false
+
+          # all of these default to true, but feel free to set to
+          # "false" if necessary for your workflow
+          android: true
+          dotnet: true
+          haskell: true
+          large-packages: true
+          docker-images: true
+          swap-storage: true
+
   unit-tests:
     runs-on: ubuntu-latest
     # runs within your Docker container

From a0d51bb3affaaee509780eefe100716cc865af6e Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 14:15:34 -0400
Subject: [PATCH 12/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 36 ++++++++++++++-----------
 1 file changed, 20 insertions(+), 16 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 396f8955..edb09777 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -1,10 +1,16 @@
 name: GitHub Actions Unit Tests
 on: [push, pull_request]
 jobs:
-  free-disk-space:
+  unit-tests:
     runs-on: ubuntu-latest
-    steps:
 
+    # runs within your Docker container
+    container:
+      image: docker://geobaserepo/gdl-cuda11:v2.8.1
+      options: --user root
+    # checkout your code from your repository
+    # and runs pytest in your pipenv environment
+    steps:
       - name: Free Disk Space (Ubuntu)
         uses: jlumbroso/free-disk-space@main
         with:
@@ -21,19 +27,17 @@ jobs:
           docker-images: true
           swap-storage: true
 
-  unit-tests:
-    runs-on: ubuntu-latest
-    # runs within your Docker container
-    container:
-      image: docker://geobaserepo/gdl-cuda11:v2.8.1
-      options: --user root
-    # checkout your code from your repository
-    # and runs pytest in your pipenv environment
-    steps:
-      - name: Install pipenv
-        run: |
-          pip install pipenv
+      - name: Pull the Docker Image
+        run: docker pull docker://geobaserepo/gdl-cuda11:v2.8.1
+
       - uses: actions/checkout@v2
-      - name: Test with pytest
+      - name: Run pytest
         run: |
-          pipenv run pytest tests/
\ No newline at end of file
+          docker run -v "$(pwd)":geo-deep-learning/tests gdl-cuda11:v2.8.1 pytest
+#      - name: Install pipenv
+#        run: |
+#          pip install pipenv
+#
+#      - name: Test with pytest
+#        run: |
+#          pipenv run pytest tests/
\ No newline at end of file

From 5283f624741f9ea0fa8635b5df8a745001679dc4 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 14:16:25 -0400
Subject: [PATCH 13/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index edb09777..43593666 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -5,9 +5,9 @@ jobs:
     runs-on: ubuntu-latest
 
     # runs within your Docker container
-    container:
-      image: docker://geobaserepo/gdl-cuda11:v2.8.1
-      options: --user root
+#    container:
+#      image: docker://geobaserepo/gdl-cuda11:v2.8.1
+#      options: --user root
     # checkout your code from your repository
     # and runs pytest in your pipenv environment
     steps:

From 5faf819fdd2b96a374885b3e10afc9e13d2cb4ff Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 14:23:11 -0400
Subject: [PATCH 14/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 34 ++++++++++++-------------
 1 file changed, 17 insertions(+), 17 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 43593666..13210ce2 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -11,29 +11,29 @@ jobs:
     # checkout your code from your repository
     # and runs pytest in your pipenv environment
     steps:
-      - name: Free Disk Space (Ubuntu)
-        uses: jlumbroso/free-disk-space@main
-        with:
-          # this might remove tools that are actually needed,
-          # if set to "true" but frees about 6 GB
-          tool-cache: false
-
-          # all of these default to true, but feel free to set to
-          # "false" if necessary for your workflow
-          android: true
-          dotnet: true
-          haskell: true
-          large-packages: true
-          docker-images: true
-          swap-storage: true
+#      - name: Free Disk Space (Ubuntu)
+#        uses: jlumbroso/free-disk-space@main
+#        with:
+#          # this might remove tools that are actually needed,
+#          # if set to "true" but frees about 6 GB
+#          tool-cache: false
+#
+#          # all of these default to true, but feel free to set to
+#          # "false" if necessary for your workflow
+#          android: true
+#          dotnet: true
+#          haskell: true
+#          large-packages: true
+#          docker-images: true
+#          swap-storage: true
 
       - name: Pull the Docker Image
-        run: docker pull docker://geobaserepo/gdl-cuda11:v2.8.1
+        run: docker pull geobaserepo/gdl-cuda11:v2.8.1
 
       - uses: actions/checkout@v2
       - name: Run pytest
         run: |
-          docker run -v "$(pwd)":geo-deep-learning/tests gdl-cuda11:v2.8.1 pytest
+          docker run -v "$(pwd)":geo-deep-learning/tests geobaserepo/gdl-cuda11:v2.8.1 pytest
 #      - name: Install pipenv
 #        run: |
 #          pip install pipenv

From 9aaf18195ae991a03c6f0363ea64de3e3dfa7db4 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 14:24:55 -0400
Subject: [PATCH 15/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 30 ++++++++++++-------------
 1 file changed, 15 insertions(+), 15 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 13210ce2..c993e968 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -11,21 +11,21 @@ jobs:
     # checkout your code from your repository
     # and runs pytest in your pipenv environment
     steps:
-#      - name: Free Disk Space (Ubuntu)
-#        uses: jlumbroso/free-disk-space@main
-#        with:
-#          # this might remove tools that are actually needed,
-#          # if set to "true" but frees about 6 GB
-#          tool-cache: false
-#
-#          # all of these default to true, but feel free to set to
-#          # "false" if necessary for your workflow
-#          android: true
-#          dotnet: true
-#          haskell: true
-#          large-packages: true
-#          docker-images: true
-#          swap-storage: true
+      - name: Free Disk Space (Ubuntu)
+        uses: jlumbroso/free-disk-space@main
+        with:
+          # this might remove tools that are actually needed,
+          # if set to "true" but frees about 6 GB
+          tool-cache: false
+
+          # all of these default to true, but feel free to set to
+          # "false" if necessary for your workflow
+          android: true
+          dotnet: true
+          haskell: true
+          large-packages: true
+          docker-images: true
+          swap-storage: true
 
       - name: Pull the Docker Image
         run: docker pull geobaserepo/gdl-cuda11:v2.8.1

From 4fd8de8e218625b47d8d4b33b99ba305617d30d6 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 16:06:07 -0400
Subject: [PATCH 16/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index c993e968..9672493c 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -33,7 +33,7 @@ jobs:
       - uses: actions/checkout@v2
       - name: Run pytest
         run: |
-          docker run -v "$(pwd)":geo-deep-learning/tests geobaserepo/gdl-cuda11:v2.8.1 pytest
+          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 pytest tests/
 #      - name: Install pipenv
 #        run: |
 #          pip install pipenv

From 4c8897c4be2cb83df1a7664e5f6ba74d5daae5fe Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 16:14:24 -0400
Subject: [PATCH 17/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 9672493c..39bf6db6 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -33,7 +33,7 @@ jobs:
       - uses: actions/checkout@v2
       - name: Run pytest
         run: |
-          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 pytest tests/
+          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 pytest geo-deep-learning/tests/
 #      - name: Install pipenv
 #        run: |
 #          pip install pipenv

From b60c0c3b9a59dc1c18228052beb11ae488a9ba4f Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 16:27:45 -0400
Subject: [PATCH 18/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 39bf6db6..3d1407f7 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -30,10 +30,13 @@ jobs:
       - name: Pull the Docker Image
         run: docker pull geobaserepo/gdl-cuda11:v2.8.1
 
+      - name: Checkout repository
       - uses: actions/checkout@v2
+
       - name: Run pytest
         run: |
-          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 pytest geo-deep-learning/tests/
+#          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 pytest geo-deep-learning/tests/
+          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 bash -c "cd /gdl && pytest tests/"
 #      - name: Install pipenv
 #        run: |
 #          pip install pipenv

From e22acf53fc82323c7a9751d5df36dfe03fcc6410 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 16:28:42 -0400
Subject: [PATCH 19/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 3d1407f7..04db901b 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -31,7 +31,7 @@ jobs:
         run: docker pull geobaserepo/gdl-cuda11:v2.8.1
 
       - name: Checkout repository
-      - uses: actions/checkout@v2
+        uses: actions/checkout@v2
 
       - name: Run pytest
         run: |

From e218bdbb81f0a604e2c6dfa3e4607b9516b11863 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 16:29:33 -0400
Subject: [PATCH 20/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 04db901b..38fb7d6c 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -30,8 +30,7 @@ jobs:
       - name: Pull the Docker Image
         run: docker pull geobaserepo/gdl-cuda11:v2.8.1
 
-      - name: Checkout repository
-        uses: actions/checkout@v2
+      - uses: actions/checkout@v2
 
       - name: Run pytest
         run: |

From 3a3d515b12c390fd1b99d5d3ec4d4e3805bc4cb8 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 16:31:28 -0400
Subject: [PATCH 21/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 11 +----------
 1 file changed, 1 insertion(+), 10 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 38fb7d6c..81556b2a 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -31,15 +31,6 @@ jobs:
         run: docker pull geobaserepo/gdl-cuda11:v2.8.1
 
       - uses: actions/checkout@v2
-
       - name: Run pytest
         run: |
-#          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 pytest geo-deep-learning/tests/
-          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 bash -c "cd /gdl && pytest tests/"
-#      - name: Install pipenv
-#        run: |
-#          pip install pipenv
-#
-#      - name: Test with pytest
-#        run: |
-#          pipenv run pytest tests/
\ No newline at end of file
+          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 bash -c "cd /gdl && pytest tests/"
\ No newline at end of file

From 73014099bba67ba6a9034c7253d6e70242c4db95 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 16:42:11 -0400
Subject: [PATCH 22/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 81556b2a..24ec7b29 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -31,6 +31,11 @@ jobs:
         run: docker pull geobaserepo/gdl-cuda11:v2.8.1
 
       - uses: actions/checkout@v2
+
+      - name: Set Permissions
+        run: |
+          sudo chown -R $USER:$USER .
+          
       - name: Run pytest
         run: |
           docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 bash -c "cd /gdl && pytest tests/"
\ No newline at end of file

From 96eca031a9e50caac3f2b17566130290034aeb24 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Fri, 29 Sep 2023 18:00:16 -0400
Subject: [PATCH 23/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 24ec7b29..bd9944cb 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -35,7 +35,7 @@ jobs:
       - name: Set Permissions
         run: |
           sudo chown -R $USER:$USER .
-          
+
       - name: Run pytest
         run: |
-          docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 bash -c "cd /gdl && pytest tests/"
\ No newline at end of file
+          sudo docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 bash -c "cd /gdl && pytest tests/"
\ No newline at end of file

From cd51b45ec386784ddcdc1b54001ce5829c109783 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 13:52:28 -0400
Subject: [PATCH 24/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 69 ++++++++++++++++++-------
 1 file changed, 51 insertions(+), 18 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index bd9944cb..90b467af 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -1,16 +1,15 @@
 name: GitHub Actions Unit Tests
 on: [push, pull_request]
 jobs:
-  unit-tests:
-    runs-on: ubuntu-latest
-
-    # runs within your Docker container
-#    container:
-#      image: docker://geobaserepo/gdl-cuda11:v2.8.1
-#      options: --user root
-    # checkout your code from your repository
-    # and runs pytest in your pipenv environment
-    steps:
+  jobs:
+    clean-and-deploy-env:
+      name: Clean the space
+      runs-on: ubuntu-latest
+      env:
+        CONDA_DIR: "/opt/conda"
+        USERNAME: "gdl_user"
+        USERID: "1000"
+      steps:
       - name: Free Disk Space (Ubuntu)
         uses: jlumbroso/free-disk-space@main
         with:
@@ -27,15 +26,49 @@ jobs:
           docker-images: true
           swap-storage: true
 
-      - name: Pull the Docker Image
-        run: docker pull geobaserepo/gdl-cuda11:v2.8.1
-
-      - uses: actions/checkout@v2
+      - name: Update the environment
+        run: |
+          apt-get update \
+          && apt-get install -y --no-install-recommends git wget unzip bzip2 build-essential sudo \
+          && apt-key del 7fa2af80 \
+          && wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-keyring_1.0-1_all.deb \
+          && sudo dpkg -i cuda-keyring_1.0-1_all.deb \
+          && wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-ubuntu2004-keyring.gpg \
+          && sudo mv cuda-ubuntu2004-keyring.gpg /usr/share/keyrings/cuda-archive-keyring.gpg \
+          && rm -f cuda-keyring_1.0-1_all.deb && rm -f /etc/apt/sources.list.d/cuda.list
 
-      - name: Set Permissions
+      - name: Install Mamba
         run: |
-          sudo chown -R $USER:$USER .
+          export PATH="$CONDA_DIR:$PATH"
+          PATH $CONDA_DIR/bin:$PATH
+          wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
+          /bin/bash /tmp/mamba.sh -b -p $CONDA_DIR && \
+          rm -rf /tmp/* && \
+          apt-get clean && \
+          rm -rf /var/lib/apt/lists/*
+          export LD_LIBRARY_PATH="$CONDA_DIR:LD_LIBRARY_PATH"
 
-      - name: Run pytest
+      - name: Checkout the repo
+        uses: actions/checkout@v2
+
+      - name: Test with pytest
         run: |
-          sudo docker run -v "$(pwd)":/gdl geobaserepo/gdl-cuda11:v2.8.1 bash -c "cd /gdl && pytest tests/"
\ No newline at end of file
+          pytest tests/
+
+#    unit-tests:
+#      runs-on: ubuntu-latest
+#      needs: clean-and-deploy
+#      # runs within your Docker container
+#      container:
+#        image: geobaserepo/gdl-cuda11:v2.8.1
+#        options: --user root
+#      # checkout your code from your repository
+#      # and runs pytest in your pipenv environment
+#      steps:
+#        - name: Install pipenv
+#          run: |
+#            pip install pipenv
+#        - uses: actions/checkout@v2
+#        - name: Test with pytest
+#          run: |
+#            pipenv run pytest tests/
\ No newline at end of file

From 506658bff9e4b16c8f70e52e051b5696dce2b092 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 13:55:09 -0400
Subject: [PATCH 25/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 16 +++++++---------
 1 file changed, 7 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 90b467af..8881a97a 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -1,15 +1,13 @@
 name: GitHub Actions Unit Tests
 on: [push, pull_request]
 jobs:
-  jobs:
-    clean-and-deploy-env:
-      name: Clean the space
-      runs-on: ubuntu-latest
-      env:
-        CONDA_DIR: "/opt/conda"
-        USERNAME: "gdl_user"
-        USERID: "1000"
-      steps:
+  clean-and-deploy-env:
+    runs-on: ubuntu-latest
+    env:
+      CONDA_DIR: "/opt/conda"
+      USERNAME: "gdl_user"
+      USERID: "1000"
+    steps:
       - name: Free Disk Space (Ubuntu)
         uses: jlumbroso/free-disk-space@main
         with:

From ce7089e88aa29e23ee8c8627f1b15adf6b4c7c74 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:01:38 -0400
Subject: [PATCH 26/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 18 +++++++++---------
 1 file changed, 9 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 8881a97a..6cbde767 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -26,24 +26,24 @@ jobs:
 
       - name: Update the environment
         run: |
-          apt-get update \
-          && apt-get install -y --no-install-recommends git wget unzip bzip2 build-essential sudo \
+          sudo apt-get update \
+          && sudo apt-get install -y --no-install-recommends git wget unzip bzip2 build-essential sudo \
           && apt-key del 7fa2af80 \
-          && wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-keyring_1.0-1_all.deb \
+          && sudo wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-keyring_1.0-1_all.deb \
           && sudo dpkg -i cuda-keyring_1.0-1_all.deb \
-          && wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-ubuntu2004-keyring.gpg \
+          && sudo wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-ubuntu2004-keyring.gpg \
           && sudo mv cuda-ubuntu2004-keyring.gpg /usr/share/keyrings/cuda-archive-keyring.gpg \
-          && rm -f cuda-keyring_1.0-1_all.deb && rm -f /etc/apt/sources.list.d/cuda.list
+          && sudo rm -f cuda-keyring_1.0-1_all.deb && sudo rm -f /etc/apt/sources.list.d/cuda.list
 
       - name: Install Mamba
         run: |
           export PATH="$CONDA_DIR:$PATH"
           PATH $CONDA_DIR/bin:$PATH
-          wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
+          sudo wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
           /bin/bash /tmp/mamba.sh -b -p $CONDA_DIR && \
-          rm -rf /tmp/* && \
-          apt-get clean && \
-          rm -rf /var/lib/apt/lists/*
+          sudo rm -rf /tmp/* && \
+          sudo apt-get clean && \
+          sudo rm -rf /var/lib/apt/lists/*
           export LD_LIBRARY_PATH="$CONDA_DIR:LD_LIBRARY_PATH"
 
       - name: Checkout the repo

From 923ef2d0d500a29d8d435f1ed017bff28685aa59 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:07:11 -0400
Subject: [PATCH 27/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 6cbde767..612b0487 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -18,17 +18,17 @@ jobs:
           # all of these default to true, but feel free to set to
           # "false" if necessary for your workflow
           android: true
-          dotnet: true
-          haskell: true
-          large-packages: true
-          docker-images: true
-          swap-storage: true
+          dotnet: false
+          haskell: false
+          large-packages: false
+          docker-images: false
+          swap-storage: false
 
       - name: Update the environment
         run: |
           sudo apt-get update \
           && sudo apt-get install -y --no-install-recommends git wget unzip bzip2 build-essential sudo \
-          && apt-key del 7fa2af80 \
+          && sudo apt-key del 7fa2af80 \
           && sudo wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-keyring_1.0-1_all.deb \
           && sudo dpkg -i cuda-keyring_1.0-1_all.deb \
           && sudo wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-ubuntu2004-keyring.gpg \

From 3cfdd7fe67b95d4227d1cfaba5e2889028a81a8a Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:09:27 -0400
Subject: [PATCH 28/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 612b0487..8ae9439c 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -37,14 +37,14 @@ jobs:
 
       - name: Install Mamba
         run: |
-          export PATH="$CONDA_DIR:$PATH"
+          echo "export PATH=$CONDA_DIR:$PATH"
           PATH $CONDA_DIR/bin:$PATH
           sudo wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
           /bin/bash /tmp/mamba.sh -b -p $CONDA_DIR && \
           sudo rm -rf /tmp/* && \
           sudo apt-get clean && \
           sudo rm -rf /var/lib/apt/lists/*
-          export LD_LIBRARY_PATH="$CONDA_DIR:LD_LIBRARY_PATH"
+          echo "export LD_LIBRARY_PATH=$CONDA_DIR:LD_LIBRARY_PATH"
 
       - name: Checkout the repo
         uses: actions/checkout@v2

From a297fa687b0153d9fd465326229793cc532bae9b Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:12:29 -0400
Subject: [PATCH 29/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 8ae9439c..f2af22f9 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -38,7 +38,6 @@ jobs:
       - name: Install Mamba
         run: |
           echo "export PATH=$CONDA_DIR:$PATH"
-          PATH $CONDA_DIR/bin:$PATH
           sudo wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
           /bin/bash /tmp/mamba.sh -b -p $CONDA_DIR && \
           sudo rm -rf /tmp/* && \

From b23488ff08354b803e54a297e6a83a9a8d083ef1 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:15:36 -0400
Subject: [PATCH 30/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index f2af22f9..a9d4f8a0 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -48,9 +48,14 @@ jobs:
       - name: Checkout the repo
         uses: actions/checkout@v2
 
+      - name: Install pyenv
+        run: |
+          pip install pipenv
+      - uses: actions/checkout@v2
       - name: Test with pytest
         run: |
-          pytest tests/
+          pipenv run pytest tests/
+
 
 #    unit-tests:
 #      runs-on: ubuntu-latest

From ecab55cc9403d1d476d87632ac96230a0efc62dc Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:15:46 -0400
Subject: [PATCH 31/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index a9d4f8a0..28a764bc 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -45,9 +45,6 @@ jobs:
           sudo rm -rf /var/lib/apt/lists/*
           echo "export LD_LIBRARY_PATH=$CONDA_DIR:LD_LIBRARY_PATH"
 
-      - name: Checkout the repo
-        uses: actions/checkout@v2
-
       - name: Install pyenv
         run: |
           pip install pipenv

From d9ae5a4505af25a1b503cddaefe0d7f6c1991373 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:18:38 -0400
Subject: [PATCH 32/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 28a764bc..d7018f1c 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -48,6 +48,7 @@ jobs:
       - name: Install pyenv
         run: |
           pip install pipenv
+          pip install pytest
       - uses: actions/checkout@v2
       - name: Test with pytest
         run: |

From 4efccf8848d0323fcbaf24f105d561c5c078fed9 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:23:09 -0400
Subject: [PATCH 33/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index d7018f1c..9f04c381 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -50,6 +50,12 @@ jobs:
           pip install pipenv
           pip install pytest
       - uses: actions/checkout@v2
+
+      - name: Install dependencies
+        run: |
+          sudo mamba env create -f environment.yml \
+          echo "export PATH=$CONDA_DIR/envs/geo_deep_env/bin:$PATH"
+
       - name: Test with pytest
         run: |
           pipenv run pytest tests/

From 61e78af78e0e2cf747c2388ea9b7ad762c5b8908 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:35:27 -0400
Subject: [PATCH 34/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 15 ++++++++++++++-
 1 file changed, 14 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 9f04c381..8d7d9912 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -35,6 +35,19 @@ jobs:
           && sudo mv cuda-ubuntu2004-keyring.gpg /usr/share/keyrings/cuda-archive-keyring.gpg \
           && sudo rm -f cuda-keyring_1.0-1_all.deb && sudo rm -f /etc/apt/sources.list.d/cuda.list
 
+      - name: Set system variables
+        run: |
+          echo 'export PATH=$PATH:$CONDA_DIR' >> $GITHUB_ENV
+          echo 'export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$CONDA_DIR/lib' >> $GITHUB_ENV
+          echo '::add-path::$CONDA_DIR' >> $GITHUB_ENV
+          echo '::set-env name=LD_LIBRARY_PATH::$CONDA_DIR/lib' >> $GITHUB_ENV
+          source $GITHUB_ENV
+
+      - name: Check if Custom Paths are Added
+        run: |
+          echo $PATH
+          echo $LD_LIBRARY_PATH
+
       - name: Install Mamba
         run: |
           echo "export PATH=$CONDA_DIR:$PATH"
@@ -43,7 +56,7 @@ jobs:
           sudo rm -rf /tmp/* && \
           sudo apt-get clean && \
           sudo rm -rf /var/lib/apt/lists/*
-          echo "export LD_LIBRARY_PATH=$CONDA_DIR:LD_LIBRARY_PATH"
+          
 
       - name: Install pyenv
         run: |

From 2e0d42a8284455d5143bbe598c6cf5863ab34800 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:40:40 -0400
Subject: [PATCH 35/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 2 --
 1 file changed, 2 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 8d7d9912..01d47506 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -39,8 +39,6 @@ jobs:
         run: |
           echo 'export PATH=$PATH:$CONDA_DIR' >> $GITHUB_ENV
           echo 'export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$CONDA_DIR/lib' >> $GITHUB_ENV
-          echo '::add-path::$CONDA_DIR' >> $GITHUB_ENV
-          echo '::set-env name=LD_LIBRARY_PATH::$CONDA_DIR/lib' >> $GITHUB_ENV
           source $GITHUB_ENV
 
       - name: Check if Custom Paths are Added

From 68fee966f12286a5c66e4628e63b064d8945e218 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:51:25 -0400
Subject: [PATCH 36/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 9 ++++-----
 1 file changed, 4 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 01d47506..32960d53 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -7,6 +7,7 @@ jobs:
       CONDA_DIR: "/opt/conda"
       USERNAME: "gdl_user"
       USERID: "1000"
+      LD_LIBRARY_PATH: "/opt/conda/lib"
     steps:
       - name: Free Disk Space (Ubuntu)
         uses: jlumbroso/free-disk-space@main
@@ -37,9 +38,7 @@ jobs:
 
       - name: Set system variables
         run: |
-          echo 'export PATH=$PATH:$CONDA_DIR' >> $GITHUB_ENV
-          echo 'export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$CONDA_DIR/lib' >> $GITHUB_ENV
-          source $GITHUB_ENV
+          echo '$CONDA_DIR' >> $GITHUB_PATH
 
       - name: Check if Custom Paths are Added
         run: |
@@ -48,9 +47,9 @@ jobs:
 
       - name: Install Mamba
         run: |
-          echo "export PATH=$CONDA_DIR:$PATH"
+#          echo "export PATH=$CONDA_DIR:$PATH"
           sudo wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
-          /bin/bash /tmp/mamba.sh -b -p $CONDA_DIR && \
+          /bin/bash /tmp/mamba.sh -b -p /opt/conda && \
           sudo rm -rf /tmp/* && \
           sudo apt-get clean && \
           sudo rm -rf /var/lib/apt/lists/*

From d1281020523135fa6e3e080110d35c0531dcc004 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:53:09 -0400
Subject: [PATCH 37/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 32960d53..781e1365 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -42,12 +42,11 @@ jobs:
 
       - name: Check if Custom Paths are Added
         run: |
-          echo $PATH
-          echo $LD_LIBRARY_PATH
+          echo "$PATH"
+          echo "$LD_LIBRARY_PATH"
 
       - name: Install Mamba
         run: |
-#          echo "export PATH=$CONDA_DIR:$PATH"
           sudo wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
           /bin/bash /tmp/mamba.sh -b -p /opt/conda && \
           sudo rm -rf /tmp/* && \

From 6ebbec1bfaa5725556b93d7445372aa4d53c9aee Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 14:55:30 -0400
Subject: [PATCH 38/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 781e1365..055b4d17 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -38,7 +38,7 @@ jobs:
 
       - name: Set system variables
         run: |
-          echo '$CONDA_DIR' >> $GITHUB_PATH
+          echo '/opt/conda' >> $GITHUB_PATH
 
       - name: Check if Custom Paths are Added
         run: |

From 09eb39db3eab6f0774265a35dcdac19aa592b7a2 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 15:02:13 -0400
Subject: [PATCH 39/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 055b4d17..6c10139f 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -39,6 +39,7 @@ jobs:
       - name: Set system variables
         run: |
           echo '/opt/conda' >> $GITHUB_PATH
+          source $GITHUB_PATH
 
       - name: Check if Custom Paths are Added
         run: |
@@ -62,8 +63,9 @@ jobs:
 
       - name: Install dependencies
         run: |
-          sudo mamba env create -f environment.yml \
-          echo "export PATH=$CONDA_DIR/envs/geo_deep_env/bin:$PATH"
+          sudo /opt/conda/mamba env create -f environment.yml \
+          echo '/opt/conda/envs/geo_deep_env/bin' >> $GITHUB_PATH
+          source $GITHUB_PATH
 
       - name: Test with pytest
         run: |

From c85006f8c31201366775fc885ed6f3a95c9f039b Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 15:04:14 -0400
Subject: [PATCH 40/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 6c10139f..f5b583d9 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -39,7 +39,7 @@ jobs:
       - name: Set system variables
         run: |
           echo '/opt/conda' >> $GITHUB_PATH
-          source $GITHUB_PATH
+#          source $GITHUB_PATH
 
       - name: Check if Custom Paths are Added
         run: |

From a3ce6ae610d74b7b1d56555005b7fb7f4fe26198 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 15:08:04 -0400
Subject: [PATCH 41/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 21 ++++++++++-----------
 1 file changed, 10 insertions(+), 11 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index f5b583d9..f72a99a9 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -36,25 +36,24 @@ jobs:
           && sudo mv cuda-ubuntu2004-keyring.gpg /usr/share/keyrings/cuda-archive-keyring.gpg \
           && sudo rm -f cuda-keyring_1.0-1_all.deb && sudo rm -f /etc/apt/sources.list.d/cuda.list
 
+      - name: Install Mamba
+        run: |
+          sudo wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
+          /bin/bash /tmp/mamba.sh -b -p /opt/conda && \
+          sudo rm -rf /tmp/* && \
+          sudo apt-get clean && \
+          sudo rm -rf /var/lib/apt/lists/*
+
       - name: Set system variables
         run: |
           echo '/opt/conda' >> $GITHUB_PATH
-#          source $GITHUB_PATH
+          source $GITHUB_PATH
 
       - name: Check if Custom Paths are Added
         run: |
           echo "$PATH"
           echo "$LD_LIBRARY_PATH"
 
-      - name: Install Mamba
-        run: |
-          sudo wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O /tmp/mamba.sh && \
-          /bin/bash /tmp/mamba.sh -b -p /opt/conda && \
-          sudo rm -rf /tmp/* && \
-          sudo apt-get clean && \
-          sudo rm -rf /var/lib/apt/lists/*
-          
-
       - name: Install pyenv
         run: |
           pip install pipenv
@@ -63,7 +62,7 @@ jobs:
 
       - name: Install dependencies
         run: |
-          sudo /opt/conda/mamba env create -f environment.yml \
+          /opt/conda/mamba env create -f environment.yml \
           echo '/opt/conda/envs/geo_deep_env/bin' >> $GITHUB_PATH
           source $GITHUB_PATH
 

From 2e2880cff0a5ef05faf77d87784c61da6a53264d Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 15:09:25 -0400
Subject: [PATCH 42/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index f72a99a9..d595f606 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -47,7 +47,7 @@ jobs:
       - name: Set system variables
         run: |
           echo '/opt/conda' >> $GITHUB_PATH
-          source $GITHUB_PATH
+#          source $GITHUB_PATH
 
       - name: Check if Custom Paths are Added
         run: |
@@ -64,7 +64,7 @@ jobs:
         run: |
           /opt/conda/mamba env create -f environment.yml \
           echo '/opt/conda/envs/geo_deep_env/bin' >> $GITHUB_PATH
-          source $GITHUB_PATH
+#          source $GITHUB_PATH
 
       - name: Test with pytest
         run: |

From 4f87ffd47b74a70035a2adc135bed9915548a2e2 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 15:13:24 -0400
Subject: [PATCH 43/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index d595f606..3d89babd 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -62,7 +62,7 @@ jobs:
 
       - name: Install dependencies
         run: |
-          /opt/conda/mamba env create -f environment.yml \
+          /opt/conda/bin/mamba env create -f environment.yml \
           echo '/opt/conda/envs/geo_deep_env/bin' >> $GITHUB_PATH
 #          source $GITHUB_PATH
 

From 3650e6cfc1c2f7a7eeb4d917cb6ce61ecf67aaf0 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 15:16:09 -0400
Subject: [PATCH 44/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index 3d89babd..de7393b2 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -62,7 +62,7 @@ jobs:
 
       - name: Install dependencies
         run: |
-          /opt/conda/bin/mamba env create -f environment.yml \
+          /opt/conda/bin/mamba env create -f environment.yml
           echo '/opt/conda/envs/geo_deep_env/bin' >> $GITHUB_PATH
 #          source $GITHUB_PATH
 

From 64d883413eb61c0a3f73e2a9bd5954258c05b0c1 Mon Sep 17 00:00:00 2001
From: ms888ekb <sokolov.usmk@gmail.com>
Date: Sun, 1 Oct 2023 15:32:29 -0400
Subject: [PATCH 45/45] changing the way the pytests are being run

---
 .github/workflows/github-actions-ci.yml | 26 +------------------------
 1 file changed, 1 insertion(+), 25 deletions(-)

diff --git a/.github/workflows/github-actions-ci.yml b/.github/workflows/github-actions-ci.yml
index de7393b2..05d00373 100644
--- a/.github/workflows/github-actions-ci.yml
+++ b/.github/workflows/github-actions-ci.yml
@@ -4,9 +4,6 @@ jobs:
   clean-and-deploy-env:
     runs-on: ubuntu-latest
     env:
-      CONDA_DIR: "/opt/conda"
-      USERNAME: "gdl_user"
-      USERID: "1000"
       LD_LIBRARY_PATH: "/opt/conda/lib"
     steps:
       - name: Free Disk Space (Ubuntu)
@@ -47,7 +44,6 @@ jobs:
       - name: Set system variables
         run: |
           echo '/opt/conda' >> $GITHUB_PATH
-#          source $GITHUB_PATH
 
       - name: Check if Custom Paths are Added
         run: |
@@ -64,27 +60,7 @@ jobs:
         run: |
           /opt/conda/bin/mamba env create -f environment.yml
           echo '/opt/conda/envs/geo_deep_env/bin' >> $GITHUB_PATH
-#          source $GITHUB_PATH
 
       - name: Test with pytest
         run: |
-          pipenv run pytest tests/
-
-
-#    unit-tests:
-#      runs-on: ubuntu-latest
-#      needs: clean-and-deploy
-#      # runs within your Docker container
-#      container:
-#        image: geobaserepo/gdl-cuda11:v2.8.1
-#        options: --user root
-#      # checkout your code from your repository
-#      # and runs pytest in your pipenv environment
-#      steps:
-#        - name: Install pipenv
-#          run: |
-#            pip install pipenv
-#        - uses: actions/checkout@v2
-#        - name: Test with pytest
-#          run: |
-#            pipenv run pytest tests/
\ No newline at end of file
+          pipenv run pytest tests/
\ No newline at end of file