pre compiling failing on Julia (1.5 or 1.6)

[deborahmleigh]

Hi I am trying to run this on a cluster and have run into a bit of an issue. When I try to install NextGenSeqUtils the Precompiling step fails with the error "UndefVarError: DNASequence not defined"

I was wondering if this is perhaps a compatibility issue or if I am missing a dependency?

Thanks!

Full error:
Pkg.add(PackageSpec(name="NextGenSeqUtils", rev="1.0", url = "https://github.com/MurrellGroup/NextGenSeqUtils.jl.git"))
Updating git-repo https://github.com/MurrellGroup/NextGenSeqUtils.jl.git
Resolving package versions...
No Changes to ~/.julia/environments/v1.6/Project.toml
No Changes to ~/.julia/environments/v1.6/Manifest.toml

julia> using NextGenSeqUtils
[ Info: Precompiling NextGenSeqUtils [59ec5594-ae11-5d8d-a868-831a7e904d88]
ERROR: LoadError: LoadError: LoadError: UndefVarError: DNASequence not defined
Stacktrace:
[1] top-level scope
@ ~/.julia/packages/NextGenSeqUtils/dtICD/src/utils.jl:60
[2] include(mod::Module, _path::String)
@ Base ./Base.jl:386
[3] include(x::String)
@ NextGenSeqUtils ~/.julia/packages/NextGenSeqUtils/dtICD/src/NextGenSeqUtils.jl:1
[4] top-level scope
@ ~/.julia/packages/NextGenSeqUtils/dtICD/src/include_all.jl:18
[5] include(mod::Module, _path::String)
@ Base ./Base.jl:386
[6] include(x::String)
@ NextGenSeqUtils ~/.julia/packages/NextGenSeqUtils/dtICD/src/NextGenSeqUtils.jl:1
[7] top-level scope
@ ~/.julia/packages/NextGenSeqUtils/dtICD/src/NextGenSeqUtils.jl:2
[8] include
@ ./Base.jl:386 [inlined]
[9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::Nothing)
@ Base ./loading.jl:1213
[10] top-level scope
@ none:1
[11] eval
@ ./boot.jl:360 [inlined]
[12] eval(x::Expr)
@ Base.MainInclude ./client.jl:446
[13] top-level scope
@ none:1
in expression starting at /home/leigh/.julia/packages/NextGenSeqUtils/dtICD/src/utils.jl:60
in expression starting at /home/leigh/.julia/packages/NextGenSeqUtils/dtICD/src/include_all.jl:18
in expression starting at /home/leigh/.julia/packages/NextGenSeqUtils/dtICD/src/NextGenSeqUtils.jl:1
ERROR: Failed to precompile NextGenSeqUtils [59ec5594-ae11-5d8d-a868-831a7e904d88] to /home/leigh/.julia/compiled/v1.6/NextGenSeqUtils/jl_9D1tgN.
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:33
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::Base.TTY, internal_stdout::Base.TTY)
@ Base ./loading.jl:1360
[3] compilecache(pkg::Base.PkgId, path::String)
@ Base ./loading.jl:1306
[4] _require(pkg::Base.PkgId)
@ Base ./loading.jl:1021
[5] require(uuidkey::Base.PkgId)
@ Base ./loading.jl:914
[6] require(into::Module, mod::Symbol)
@ Base ./loading.jl:901