From ad664d28a17e11b8f963903d9f24a59a20764d9f Mon Sep 17 00:00:00 2001
From: rocky <rb@dustyfeet.com>
Date: Mon, 25 Nov 2024 11:27:04 -0500
Subject: [PATCH 1/2] Redo DirectedEdge and UnirectedEdge as operators

---
 .github/workflows/ubuntu.yml |  4 ++--
 pymathics/graph/base.py      | 30 +++++++++++++++++-------------
 2 files changed, 19 insertions(+), 15 deletions(-)

diff --git a/.github/workflows/ubuntu.yml b/.github/workflows/ubuntu.yml
index c8cdb0d..fb6f057 100644
--- a/.github/workflows/ubuntu.yml
+++ b/.github/workflows/ubuntu.yml
@@ -23,10 +23,10 @@ jobs:
         python -m pip install --upgrade pip
         python -m pip install pytest
         # Can comment out when next Mathics core and Mathics-scanner are released
-        # python -m pip install -e git+https://github.com/Mathics3/mathics-scanner#egg=Mathics-Scanner[full]
+        python -m pip install -e git+https://github.com/Mathics3/mathics-scanner#egg=Mathics-Scanner[full]
         python -m pip install -e git+https://github.com/Mathics3/mathics-core#egg=Mathics3[full]
         python -m pip install -e .
-        # (cd src/mathics3 && bash ./admin-tools/make-op-tables.sh)
+        (cd src/mathics3 && bash ./admin-tools/make-op-tables.sh)
     - name: install pymathics graph
       run: |
         make develop
diff --git a/pymathics/graph/base.py b/pymathics/graph/base.py
index 59e7daa..211532d 100644
--- a/pymathics/graph/base.py
+++ b/pymathics/graph/base.py
@@ -10,6 +10,11 @@
 from inspect import isgenerator
 from typing import Callable, Optional, Union
 
+from mathics.builtin.no_meaning import (
+    DirectedEdge as GenericDirectedEdge,
+    UndirectedEdge as GenericUndirectedEdge,
+)
+from mathics.core.attributes import A_PROTECTED, A_READ_PROTECTED
 from mathics.core.builtin import AtomBuiltin, Builtin
 from mathics.core.atoms import Atom, Integer, Integer0, Integer1, Integer2, String
 from mathics.core.convert.expression import ListExpression, from_python, to_mathics_list
@@ -893,8 +898,8 @@ def neighbors(v):
             return self._retrieve(graph, what, neighbors, expression, evaluation)
 
 
-class DirectedEdge(Builtin):
-    """
+class DirectedEdge(GenericDirectedEdge):
+    r"""
     Edge of a <url>
     :Directed graph:
     https://en.wikipedia.org/wiki/Directed_graph</url> (<url>
@@ -908,9 +913,15 @@ class DirectedEdge(Builtin):
       <dt>'DirectedEdge[$u$, $v$]'
       <dd>create a directed edge from $u$ to $v$.
     </dl>
+
+    >> DirectedEdge[x, y, z]
+     = x → y → z
+
+    >> a \[DirectedEdge] b
+     = a → b
     """
 
-    summary_text = "make a directed graph edge"
+    attributes = A_PROTECTED | A_READ_PROTECTED
 
 
 class EdgeConnectivity(_NetworkXBuiltin):
@@ -1494,7 +1505,7 @@ def _items(self, graph):
         return graph.vertices
 
 
-class UndirectedEdge(Builtin):
+class UndirectedEdge(GenericUndirectedEdge):
     """
     <url>
     :WMA link:
@@ -1506,17 +1517,10 @@ class UndirectedEdge(Builtin):
     </dl>
 
     >> a <-> b
-     = UndirectedEdge[a, b]
-
-    >> (a <-> b) <-> c
-     = UndirectedEdge[UndirectedEdge[a, b], c]
-
-    >> a <-> (b <-> c)
-     = UndirectedEdge[a, UndirectedEdge[b, c]]
+     = ...
     """
 
-    summary_text = "undirected graph edge"
-    pass
+    attributes = A_PROTECTED | A_READ_PROTECTED
 
 
 # class EdgeAdd(_NetworkXBuiltin):

From f482ed87a5a3ef80db093ffe5cd34c5a7cfe00b9 Mon Sep 17 00:00:00 2001
From: rocky <rb@dustyfeet.com>
Date: Mon, 25 Nov 2024 11:33:03 -0500
Subject: [PATCH 2/2] NetworkX random_tree -> random_labelled_tree

random_tree is deprecated in NetworkX
---
 pymathics/graph/parametric.py | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/pymathics/graph/parametric.py b/pymathics/graph/parametric.py
index acb76ca..b28b6dd 100644
--- a/pymathics/graph/parametric.py
+++ b/pymathics/graph/parametric.py
@@ -579,7 +579,7 @@ class RandomTree(_NetworkXBuiltin):
     """
     <url>:NetworkX:
     https://networkx.org/documentation/networkx-2.8.8/reference\
-/generated/networkx.generators.trees.random_tree.html</url>, <url>
+/generated/networkx.generators.trees.random_labeled_tree.html</url>, <url>
     :WMA:
     https://reference.wolfram.com/language/ref/RandomTree.html</url>
 
@@ -610,7 +610,9 @@ def eval(
             return
 
         args = (py_n,)
-        g = graph_helper(nx.random_tree, options, False, "tree", evaluation, 0, *args)
+        g = graph_helper(
+            nx.random_labeled_tree, options, False, "tree", evaluation, 0, *args
+        )
         if not g:
             return None
         g.G.n = n