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README.md

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+# ChIPKernels
+
+ChIPKernels is an R package for building different string kernels used for DNA Sequence analysis. A dictionary of the desired kernel must be built and this dictionary can be used for determining kernels for DNA Sequences. This package has been tested with R 3.2
+
+The following representations are supported.
+  1. Mismatch/Dimismatch kernel: ```build.mismatch.dictionary```
+  2. Positional wildcard kernel: ```build.wildcard.dictionary```
+
+After the dictionary is built, use the ```build.features.kernels``` function to determine the feature matrix and kernel for DNA Sequences.