Refactor volcano iii #361
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Refactor volcano iii #361
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JuliaS92
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Nov 12, 2024
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| for k, v in dict( | ||
| zip( | ||
| self.rawinput[self._gene_names].tolist(), | ||
| self.rawinput[self.index_column].tolist(), | ||
| ) | ||
| ).items() |
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This is not necessarily unique, and should ideally raise an error in some of our test-data sets that contain isoform ids. E.g. TPM1 occurs 5 times in testfiles/maxquant/proteinGroups.txt with different base Protein IDs.
JuliaS92
reviewed
Nov 12, 2024
JuliaS92
approved these changes
Nov 12, 2024
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move the gene to protein id mapping to DataSet, thus simplifying LLM part