pyproject.toml

[build-system]
requires = [
    "setuptools", "wheel"
]
build-backend = "setuptools.build_meta"

[project]
dynamic = ['version']
name = "macapype"
maintainers = [{name = "Macapype developers" }]
authors= [{name = "Macatools team"}]
description= "Pipeline for anatomic processing for macaque "
readme = {content-type = "text/markdown", file = "README.md"}
requires-python = ">= 3.10"
license = {text = "BSD-3-Clause"}

dependencies = [
    "nipype",
    "rdflib==6.3.1",
    "pandas==2.2.3",
    "matplotlib",
    "nilearn",
    "networkx",
    "pybids",
    "scikit-image",
    "nibabel",
    "numpy",
    "SimpleITK"
]

[project.optional-dependencies]
# Dependencies for building the documentation
doc_deps = [
     "sphinx",
     "sphinx-gallery",
     "sphinx_bootstrap_theme",
     "numpydoc",
     "sphinxcontrib-fulltoc"
]

# Dependencies for test
test_deps = [
    "pytest",
    "pytest-cov",
    "codecov",
    ]
flake_deps = [
    "flake8"
    ]

# real calls
test=["macapype[test_deps, flake_deps]"]
doc=["macapype[flake_deps, test_deps, doc_deps]"]

[project.scripts]
segment_pnh = "workflows.segment_pnh:main"




[tool.setuptools.packages]
find = {}  # Scanning implicit namespaces is active by default