From 0a81e1d510dfd548c463306b39d3bceef66de038 Mon Sep 17 00:00:00 2001
From: "github-actions[bot]"
 <41898282+github-actions[bot]@users.noreply.github.com>
Date: Tue, 17 Dec 2024 18:56:52 +0000
Subject: [PATCH] Update documentation

---
 .../files_for_e3sm/diagnostic_masks.html         |  2 +-
 ...hericalBaseStep.save_and_plot_cell_width.html |  6 +++---
 .../compass.landice.mesh.build_mali_mesh.html    |  2 +-
 ...ass.landice.mesh.get_dist_to_edge_and_gl.html |  8 ++++----
 .../compass.landice.mesh.gridded_flood_fill.html |  2 +-
 .../compass.landice.mesh.mpas_flood_fill.html    |  8 ++++----
 ...compass.landice.mesh.preprocess_ais_data.html |  2 +-
 .../compass.landice.mesh.set_cell_width.html     | 12 ++++++------
 ...process_output.compute_convergence_rates.html |  6 +++---
 ...ransport.process_output.plot_convergence.html | 16 ++++++++--------
 ...rt.process_output.print_error_conv_table.html | 10 +++++-----
 ...ass.ocean.vertical.grid_1d.write_1d_grid.html |  2 +-
 12 files changed, 38 insertions(+), 38 deletions(-)

diff --git a/latest/_modules/compass/ocean/tests/global_ocean/files_for_e3sm/diagnostic_masks.html b/latest/_modules/compass/ocean/tests/global_ocean/files_for_e3sm/diagnostic_masks.html
index d946f5210..0106ca21d 100644
--- a/latest/_modules/compass/ocean/tests/global_ocean/files_for_e3sm/diagnostic_masks.html
+++ b/latest/_modules/compass/ocean/tests/global_ocean/files_for_e3sm/diagnostic_masks.html
@@ -201,7 +201,7 @@ <h1>Source code for compass.ocean.tests.global_ocean.files_for_e3sm.diagnostic_m
 
     <span class="n">gf</span> <span class="o">=</span> <span class="n">GeometricFeatures</span><span class="p">()</span>
     <span class="n">region_groups</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Antarctic Regions&#39;</span><span class="p">,</span> <span class="s1">&#39;Arctic Ocean Regions&#39;</span><span class="p">,</span>
-                     <span class="s1">&#39;Arctic Sea Ice Regions&#39;</span><span class="p">,</span> <span class="s1">&#39;Greenland Regions&#39;</span><span class="p">,</span>
+                     <span class="s1">&#39;Arctic Sea Ice Regions&#39;</span><span class="p">,</span> <span class="s1">&#39;ISMIP6 Greenland Regions&#39;</span><span class="p">,</span>
                      <span class="s1">&#39;Ocean Basins&#39;</span><span class="p">,</span> <span class="s1">&#39;Ocean Subbasins&#39;</span><span class="p">,</span> <span class="s1">&#39;ISMIP6 Regions&#39;</span><span class="p">]</span>
 
     <span class="k">if</span> <span class="n">with_ice_shelf_cavities</span><span class="p">:</span>
diff --git a/latest/developers_guide/generated/compass.mesh.spherical.SphericalBaseStep.save_and_plot_cell_width.html b/latest/developers_guide/generated/compass.mesh.spherical.SphericalBaseStep.save_and_plot_cell_width.html
index 06262e3fd..32101e875 100644
--- a/latest/developers_guide/generated/compass.mesh.spherical.SphericalBaseStep.save_and_plot_cell_width.html
+++ b/latest/developers_guide/generated/compass.mesh.spherical.SphericalBaseStep.save_and_plot_cell_width.html
@@ -155,9 +155,9 @@ <h1>compass.mesh.spherical.SphericalBaseStep.save_and_plot_cell_width<a class="h
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>lon</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – longitude in degrees (length n and between -180 and 180)</p></li>
-<li><p><strong>lat</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – longitude in degrees (length m and between -90 and 90)</p></li>
-<li><p><strong>cell_width</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – m x n array of cell width in km</p></li>
+<li><p><strong>lon</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – longitude in degrees (length n and between -180 and 180)</p></li>
+<li><p><strong>lat</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – longitude in degrees (length m and between -90 and 90)</p></li>
+<li><p><strong>cell_width</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – m x n array of cell width in km</p></li>
 </ul>
 </dd>
 </dl>
diff --git a/latest/developers_guide/landice/generated/compass.landice.mesh.build_mali_mesh.html b/latest/developers_guide/landice/generated/compass.landice.mesh.build_mali_mesh.html
index 86a34188c..3751d01ea 100644
--- a/latest/developers_guide/landice/generated/compass.landice.mesh.build_mali_mesh.html
+++ b/latest/developers_guide/landice/generated/compass.landice.mesh.build_mali_mesh.html
@@ -135,7 +135,7 @@ <h1>compass.landice.mesh.build_mali_mesh<a class="headerlink" href="#compass-lan
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>cell_width</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – Desired width of MPAS cells calculated by <a class="reference internal" href="compass.landice.mesh.build_cell_width.html#compass.landice.mesh.build_cell_width" title="compass.landice.mesh.build_cell_width"><code class="xref py py-func docutils literal notranslate"><span class="pre">build_cell_width()</span></code></a>
+<li><p><strong>cell_width</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – Desired width of MPAS cells calculated by <a class="reference internal" href="compass.landice.mesh.build_cell_width.html#compass.landice.mesh.build_cell_width" title="compass.landice.mesh.build_cell_width"><code class="xref py py-func docutils literal notranslate"><span class="pre">build_cell_width()</span></code></a>
 based on mesh density functions define in <a class="reference internal" href="compass.landice.mesh.set_cell_width.html#compass.landice.mesh.set_cell_width" title="compass.landice.mesh.set_cell_width"><code class="xref py py-func docutils literal notranslate"><span class="pre">set_cell_width()</span></code></a>
 to pass to
 <code class="xref py py-func docutils literal notranslate"><span class="pre">mpas_tools.mesh.creation.build_mesh.build_planar_mesh()</span></code>.</p></li>
diff --git a/latest/developers_guide/landice/generated/compass.landice.mesh.get_dist_to_edge_and_gl.html b/latest/developers_guide/landice/generated/compass.landice.mesh.get_dist_to_edge_and_gl.html
index d4809e762..1a457c301 100644
--- a/latest/developers_guide/landice/generated/compass.landice.mesh.get_dist_to_edge_and_gl.html
+++ b/latest/developers_guide/landice/generated/compass.landice.mesh.get_dist_to_edge_and_gl.html
@@ -134,11 +134,11 @@ <h1>compass.landice.mesh.get_dist_to_edge_and_gl<a class="headerlink" href="#com
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>thk</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – Ice thickness field from gridded dataset,
+<li><p><strong>thk</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – Ice thickness field from gridded dataset,
 usually after trimming to flood fill mask</p></li>
-<li><p><strong>topg</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – Bed topography field from gridded dataset</p></li>
-<li><p><strong>x</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – x coordinates from gridded dataset</p></li>
-<li><p><strong>y</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – y coordinates from gridded dataset</p></li>
+<li><p><strong>topg</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – Bed topography field from gridded dataset</p></li>
+<li><p><strong>x</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – x coordinates from gridded dataset</p></li>
+<li><p><strong>y</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – y coordinates from gridded dataset</p></li>
 <li><p><strong>section_name</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><em>str</em></a>) – Section of the config file from which to read parameters. The
 following options to be set in the given config section:
 <code class="docutils literal notranslate"><span class="pre">levels</span></code>, <code class="docutils literal notranslate"><span class="pre">x_min</span></code>, <code class="docutils literal notranslate"><span class="pre">x_max</span></code>, <code class="docutils literal notranslate"><span class="pre">y_min</span></code>, <code class="docutils literal notranslate"><span class="pre">y_max</span></code>,
diff --git a/latest/developers_guide/landice/generated/compass.landice.mesh.gridded_flood_fill.html b/latest/developers_guide/landice/generated/compass.landice.mesh.gridded_flood_fill.html
index fc797f8be..3026ba679 100644
--- a/latest/developers_guide/landice/generated/compass.landice.mesh.gridded_flood_fill.html
+++ b/latest/developers_guide/landice/generated/compass.landice.mesh.gridded_flood_fill.html
@@ -135,7 +135,7 @@ <h1>compass.landice.mesh.gridded_flood_fill<a class="headerlink" href="#compass-
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>field</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – Array from gridded dataset to use for flood-fill.
+<li><p><strong>field</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – Array from gridded dataset to use for flood-fill.
 Usually ice thickness.</p></li>
 <li><p><strong>iStart</strong> (<a class="reference external" href="https://docs.python.org/3/library/functions.html#int" title="(in Python v3.13)"><em>int</em></a>) – x index from which to start flood fill for field.
 Defaults to the center x coordinate.</p></li>
diff --git a/latest/developers_guide/landice/generated/compass.landice.mesh.mpas_flood_fill.html b/latest/developers_guide/landice/generated/compass.landice.mesh.mpas_flood_fill.html
index d4787db2e..b3c3cb50f 100644
--- a/latest/developers_guide/landice/generated/compass.landice.mesh.mpas_flood_fill.html
+++ b/latest/developers_guide/landice/generated/compass.landice.mesh.mpas_flood_fill.html
@@ -131,12 +131,12 @@ <h1>compass.landice.mesh.mpas_flood_fill<a class="headerlink" href="#compass-lan
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>seed_mask</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – Integer array of locations from which to flood fill
+<li><p><strong>seed_mask</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – Integer array of locations from which to flood fill
 0 = invalid, 1 = valid</p></li>
-<li><p><strong>grow_mask</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – Integer array of locations valid for growing into
+<li><p><strong>grow_mask</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – Integer array of locations valid for growing into
 0 = invalid, 1 = valid</p></li>
-<li><p><strong>cellsOnCell</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – cellsOnCell array from the mpas mesh</p></li>
-<li><p><strong>nEdgesOnCell</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – nEdgesOnCell array from the mpas mesh</p></li>
+<li><p><strong>cellsOnCell</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – cellsOnCell array from the mpas mesh</p></li>
+<li><p><strong>nEdgesOnCell</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – nEdgesOnCell array from the mpas mesh</p></li>
 <li><p><strong>grow_iters</strong> (<em>integer</em>) – optional argument limiting the number of iterations
 over which to extend the mask</p></li>
 </ul>
diff --git a/latest/developers_guide/landice/generated/compass.landice.mesh.preprocess_ais_data.html b/latest/developers_guide/landice/generated/compass.landice.mesh.preprocess_ais_data.html
index 826edf8b3..0628ec11b 100644
--- a/latest/developers_guide/landice/generated/compass.landice.mesh.preprocess_ais_data.html
+++ b/latest/developers_guide/landice/generated/compass.landice.mesh.preprocess_ais_data.html
@@ -133,7 +133,7 @@ <h1>compass.landice.mesh.preprocess_ais_data<a class="headerlink" href="#compass
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>source_gridded_dataset</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><em>str</em></a>) – name of NetCDF file containing original AIS gridded datasets</p></li>
-<li><p><strong>floodFillMask</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – 0/1 mask of flood filled ice region</p></li>
+<li><p><strong>floodFillMask</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – 0/1 mask of flood filled ice region</p></li>
 </ul>
 </dd>
 <dt class="field-even">Returns<span class="colon">:</span></dt>
diff --git a/latest/developers_guide/landice/generated/compass.landice.mesh.set_cell_width.html b/latest/developers_guide/landice/generated/compass.landice.mesh.set_cell_width.html
index 8bbd960ff..bd216acd5 100644
--- a/latest/developers_guide/landice/generated/compass.landice.mesh.set_cell_width.html
+++ b/latest/developers_guide/landice/generated/compass.landice.mesh.set_cell_width.html
@@ -141,20 +141,20 @@ <h1>compass.landice.mesh.set_cell_width<a class="headerlink" href="#compass-land
 <code class="docutils literal notranslate"><span class="pre">use_dist_to_edge</span></code>, <code class="docutils literal notranslate"><span class="pre">use_dist_to_grounding_line</span></code>, and <code class="docutils literal notranslate"><span class="pre">use_bed</span></code>.
 See the Land-Ice Framework section of the Users or Developers guide
 for more information about these options and their uses.</p></li>
-<li><p><strong>thk</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – Ice thickness field from gridded dataset,
+<li><p><strong>thk</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – Ice thickness field from gridded dataset,
 usually after trimming to flood fill mask</p></li>
-<li><p><strong>bed</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – Bed topography from gridded dataset</p></li>
-<li><p><strong>vx</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a><em>, </em><em>optional</em>) – x-component of ice velocity from gridded dataset,
+<li><p><strong>bed</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – Bed topography from gridded dataset</p></li>
+<li><p><strong>vx</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a><em>, </em><em>optional</em>) – x-component of ice velocity from gridded dataset,
 usually after trimming to flood fill mask. Can be set to <code class="docutils literal notranslate"><span class="pre">None</span></code>
 if <code class="docutils literal notranslate"><span class="pre">use_speed</span> <span class="pre">==</span> <span class="pre">False</span></code> in config file.</p></li>
-<li><p><strong>vy</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a><em>, </em><em>optional</em>) – y-component of ice velocity from gridded dataset,
+<li><p><strong>vy</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a><em>, </em><em>optional</em>) – y-component of ice velocity from gridded dataset,
 usually after trimming to flood fill mask. Can be set to <code class="docutils literal notranslate"><span class="pre">None</span></code>
 if <code class="docutils literal notranslate"><span class="pre">use_speed</span> <span class="pre">==</span> <span class="pre">False</span></code> in config file.</p></li>
-<li><p><strong>dist_to_edge</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a><em>, </em><em>optional</em>) – Distance from each cell to ice edge, calculated in separate function.
+<li><p><strong>dist_to_edge</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a><em>, </em><em>optional</em>) – Distance from each cell to ice edge, calculated in separate function.
 Can be set to <code class="docutils literal notranslate"><span class="pre">None</span></code> if <code class="docutils literal notranslate"><span class="pre">use_dist_to_edge</span> <span class="pre">==</span> <span class="pre">False</span></code> in config file
 and you do not want to set large <code class="docutils literal notranslate"><span class="pre">cell_width</span></code> where cells will be
 culled anyway, but this is not recommended.</p></li>
-<li><p><strong>dist_to_grounding_line</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a><em>, </em><em>optional</em>) – Distance from each cell to grounding line, calculated in separate
+<li><p><strong>dist_to_grounding_line</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a><em>, </em><em>optional</em>) – Distance from each cell to grounding line, calculated in separate
 function.  Can be set to <code class="docutils literal notranslate"><span class="pre">None</span></code> if
 <code class="docutils literal notranslate"><span class="pre">use_dist_to_grounding_line</span> <span class="pre">==</span> <span class="pre">False</span></code> in config file.</p></li>
 <li><p><strong>flood_fill_iStart</strong> (<a class="reference external" href="https://docs.python.org/3/library/functions.html#int" title="(in Python v3.13)"><em>int</em></a><em>, </em><em>optional</em>) – x-index location to start flood-fill when using bed topography</p></li>
diff --git a/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.compute_convergence_rates.html b/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.compute_convergence_rates.html
index b137dbe33..82bde8779 100644
--- a/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.compute_convergence_rates.html
+++ b/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.compute_convergence_rates.html
@@ -134,9 +134,9 @@ <h1>compass.ocean.tests.sphere_transport.process_output.compute_convergence_rate
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>dlambda</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – approximate mesh size</p></li>
-<li><p><strong>linf</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – linf relative error associated with each mesh size</p></li>
-<li><p><strong>l2</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – l2 relative error associated with each mesh size</p></li>
+<li><p><strong>dlambda</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – approximate mesh size</p></li>
+<li><p><strong>linf</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – linf relative error associated with each mesh size</p></li>
+<li><p><strong>l2</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – l2 relative error associated with each mesh size</p></li>
 </ul>
 </dd>
 <dt class="field-even">Returns<span class="colon">:</span></dt>
diff --git a/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.plot_convergence.html b/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.plot_convergence.html
index b47a5fe4f..5f0731a1e 100644
--- a/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.plot_convergence.html
+++ b/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.plot_convergence.html
@@ -134,15 +134,15 @@ <h1>compass.ocean.tests.sphere_transport.process_output.plot_convergence<a class
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>ax</strong> (<em>matplotlib.Axes</em>) – A matplotlib Axes instance</p></li>
 <li><p><strong>tcname</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><em>str</em></a>) – The name of the test case</p></li>
-<li><p><strong>dlambda</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – An array of mesh size values</p></li>
-<li><p><strong>resvals</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – An integer array of resolution values, e.g., [120, 240]
+<li><p><strong>dlambda</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – An array of mesh size values</p></li>
+<li><p><strong>resvals</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – An integer array of resolution values, e.g., [120, 240]
 for <code class="docutils literal notranslate"><span class="pre">QU120</span></code> and <code class="docutils literal notranslate"><span class="pre">QU240</span></code></p></li>
-<li><p><strong>linf1</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – the linf error for tracer1</p></li>
-<li><p><strong>l21</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – the l2 error for tracer1</p></li>
-<li><p><strong>linf2</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – the linf error for tracer2</p></li>
-<li><p><strong>l22</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – the l2 error for tracer2</p></li>
-<li><p><strong>linf3</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – the linf error for tracer3</p></li>
-<li><p><strong>l23</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – the l2 error for tracer3</p></li>
+<li><p><strong>linf1</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – the linf error for tracer1</p></li>
+<li><p><strong>l21</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – the l2 error for tracer1</p></li>
+<li><p><strong>linf2</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – the linf error for tracer2</p></li>
+<li><p><strong>l22</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – the l2 error for tracer2</p></li>
+<li><p><strong>linf3</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – the linf error for tracer3</p></li>
+<li><p><strong>l23</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – the l2 error for tracer3</p></li>
 </ul>
 </dd>
 </dl>
diff --git a/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.print_error_conv_table.html b/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.print_error_conv_table.html
index ae7f251d9..4782d3d17 100644
--- a/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.print_error_conv_table.html
+++ b/latest/developers_guide/ocean/generated/compass.ocean.tests.sphere_transport.process_output.print_error_conv_table.html
@@ -134,14 +134,14 @@ <h1>compass.ocean.tests.sphere_transport.process_output.print_error_conv_table<a
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>tcname</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><em>str</em></a>) – Name of test case</p></li>
 <li><p><strong>resvals</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#list" title="(in Python v3.13)"><em>list</em></a>) – resolution values such as 240, for <code class="docutils literal notranslate"><span class="pre">QU240</span></code></p></li>
-<li><p><strong>dlambda</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – approximate mesh size</p></li>
-<li><p><strong>l2</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – l2 error, computed by <code class="docutils literal notranslate"><span class="pre">compute_error_from_output_ncfile()</span></code>
+<li><p><strong>dlambda</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – approximate mesh size</p></li>
+<li><p><strong>l2</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – l2 error, computed by <code class="docutils literal notranslate"><span class="pre">compute_error_from_output_ncfile()</span></code>
 for <code class="docutils literal notranslate"><span class="pre">tracer1</span></code></p></li>
-<li><p><strong>l2rates</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – appx. convergence rates for l2, computed by
+<li><p><strong>l2rates</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – appx. convergence rates for l2, computed by
 <code class="docutils literal notranslate"><span class="pre">compute_convergence_rates()</span></code></p></li>
-<li><p><strong>linf</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – linf error, computed by <code class="docutils literal notranslate"><span class="pre">compute_error_from_output_ncfile()</span></code>
+<li><p><strong>linf</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – linf error, computed by <code class="docutils literal notranslate"><span class="pre">compute_error_from_output_ncfile()</span></code>
 for <code class="docutils literal notranslate"><span class="pre">tracer1</span></code></p></li>
-<li><p><strong>linfrates</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – appx. convergence rates for linf, computed
+<li><p><strong>linfrates</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – appx. convergence rates for linf, computed
 by <code class="docutils literal notranslate"><span class="pre">compute_convergence_rates()</span></code></p></li>
 </ul>
 </dd>
diff --git a/latest/developers_guide/ocean/generated/compass.ocean.vertical.grid_1d.write_1d_grid.html b/latest/developers_guide/ocean/generated/compass.ocean.vertical.grid_1d.write_1d_grid.html
index fac64f160..6cb0b18d6 100644
--- a/latest/developers_guide/ocean/generated/compass.ocean.vertical.grid_1d.write_1d_grid.html
+++ b/latest/developers_guide/ocean/generated/compass.ocean.vertical.grid_1d.write_1d_grid.html
@@ -131,7 +131,7 @@ <h1>compass.ocean.vertical.grid_1d.write_1d_grid<a class="headerlink" href="#com
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>interfaces</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.1)"><em>numpy.ndarray</em></a>) – A 1D array of positive depths for layer interfaces in meters</p></li>
+<li><p><strong>interfaces</strong> (<a class="reference external" href="https://numpy.org/doc/stable/reference/generated/numpy.ndarray.html#numpy.ndarray" title="(in NumPy v2.2)"><em>numpy.ndarray</em></a>) – A 1D array of positive depths for layer interfaces in meters</p></li>
 <li><p><strong>out_filename</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.13)"><em>str</em></a>) – MPAS file name for output of vertical grid</p></li>
 </ul>
 </dd>